Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0545060 | XP_013455749.1 | 92.857 | 336 | 24 | 0 | 1 | 336 | 42 | 377 | 0.0 | 607 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0545060 | sp|Q9Y3A4|RRP7A_HUMAN | 29.730 | 148 | 94 | 3 | 192 | 336 | 140 | 280 | 1.32e-11 | 67.8 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0545060 | A0A072UV85 | 92.857 | 336 | 24 | 0 | 1 | 336 | 42 | 377 | 0.0 | 607 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004060 | Msa0545060 | 0.803369 | 3.602784e-49 | -8.615850e-47 |
Msa0004860 | Msa0545060 | 0.806374 | 8.486833e-50 | -8.615850e-47 |
Msa0006880 | Msa0545060 | 0.818273 | 2.136021e-52 | -8.615850e-47 |
Msa0007540 | Msa0545060 | 0.826504 | 2.616832e-54 | -8.615850e-47 |
Msa0008410 | Msa0545060 | 0.802275 | 6.062151e-49 | -8.615850e-47 |
Msa0010770 | Msa0545060 | 0.802480 | 5.499168e-49 | -8.615850e-47 |
Msa0014570 | Msa0545060 | 0.802387 | 5.748048e-49 | -8.615850e-47 |
Msa0015120 | Msa0545060 | 0.804814 | 1.803351e-49 | -8.615850e-47 |
Msa0015140 | Msa0545060 | 0.815167 | 1.061960e-51 | -8.615850e-47 |
Msa0015680 | Msa0545060 | 0.814040 | 1.886287e-51 | -8.615850e-47 |
Msa0027390 | Msa0545060 | 0.836002 | 1.207423e-56 | -8.615850e-47 |
Msa0030280 | Msa0545060 | 0.816776 | 4.645445e-52 | -8.615850e-47 |
Msa0031820 | Msa0545060 | 0.830852 | 2.325097e-55 | -8.615850e-47 |
Msa0032260 | Msa0545060 | 0.805315 | 1.416784e-49 | -8.615850e-47 |
Msa0033880 | Msa0545060 | 0.804095 | 2.546162e-49 | -8.615850e-47 |
Msa0037160 | Msa0545060 | 0.833680 | 4.639596e-56 | -8.615850e-47 |
Msa0039250 | Msa0545060 | 0.821205 | 4.569526e-53 | -8.615850e-47 |
Msa0043500 | Msa0545060 | 0.806822 | 6.824706e-50 | -8.615850e-47 |
Msa0044020 | Msa0545060 | 0.803180 | 3.942652e-49 | -8.615850e-47 |
Msa0045490 | Msa0545060 | 0.823105 | 1.656872e-53 | -8.615850e-47 |
Msa0048000 | Msa0545060 | 0.804134 | 2.498933e-49 | -8.615850e-47 |
Msa0054820 | Msa0545060 | 0.802676 | 5.011855e-49 | -8.615850e-47 |
Msa0054930 | Msa0545060 | 0.801217 | 9.993586e-49 | -8.615850e-47 |
Msa0055150 | Msa0545060 | 0.814020 | 1.905714e-51 | -8.615850e-47 |
Msa0056030 | Msa0545060 | 0.814196 | 1.742220e-51 | -8.615850e-47 |
Msa0057140 | Msa0545060 | 0.819557 | 1.091001e-52 | -8.615850e-47 |
Msa0057710 | Msa0545060 | 0.813883 | 2.042358e-51 | -8.615850e-47 |
Msa0064290 | Msa0545060 | 0.809834 | 1.555427e-50 | -8.615850e-47 |
Msa0068760 | Msa0545060 | 0.801512 | 8.693829e-49 | -8.615850e-47 |
Msa0070170 | Msa0545060 | 0.802147 | 6.439026e-49 | -8.615850e-47 |
Msa0070430 | Msa0545060 | 0.815264 | 1.010809e-51 | -8.615850e-47 |
Msa0076000 | Msa0545060 | 0.835067 | 2.081672e-56 | -8.615850e-47 |
Msa0077880 | Msa0545060 | 0.800962 | 1.126665e-48 | -8.615850e-47 |
Msa0090030 | Msa0545060 | 0.807628 | 4.606956e-50 | -8.615850e-47 |
Msa0091500 | Msa0545060 | 0.802755 | 4.825557e-49 | -8.615850e-47 |
Msa0094920 | Msa0545060 | 0.804032 | 2.624201e-49 | -8.615850e-47 |
Msa0097950 | Msa0545060 | 0.839672 | 1.377084e-57 | -8.615850e-47 |
Msa0098740 | Msa0545060 | 0.810913 | 9.100162e-51 | -8.615850e-47 |
Msa0100160 | Msa0545060 | 0.813749 | 2.186754e-51 | -8.615850e-47 |
Msa0101880 | Msa0545060 | 0.805255 | 1.458092e-49 | -8.615850e-47 |
Msa0104610 | Msa0545060 | 0.827415 | 1.584126e-54 | -8.615850e-47 |
Msa0108870 | Msa0545060 | 0.842422 | 2.610956e-58 | -8.615850e-47 |
Msa0118000 | Msa0545060 | 0.808961 | 2.394099e-50 | -8.615850e-47 |
Msa0122810 | Msa0545060 | 0.808520 | 2.974203e-50 | -8.615850e-47 |
Msa0126770 | Msa0545060 | 0.819860 | 9.305034e-53 | -8.615850e-47 |
Msa0127310 | Msa0545060 | 0.804736 | 1.872389e-49 | -8.615850e-47 |
Msa0127850 | Msa0545060 | 0.813030 | 3.145683e-51 | -8.615850e-47 |
Msa0133630 | Msa0545060 | 0.823196 | 1.577996e-53 | -8.615850e-47 |
Msa0133720 | Msa0545060 | 0.831488 | 1.622790e-55 | -8.615850e-47 |
Msa0133820 | Msa0545060 | 0.811442 | 6.985874e-51 | -8.615850e-47 |
Msa0135420 | Msa0545060 | 0.851557 | 8.214826e-61 | -8.615850e-47 |
Msa0136380 | Msa0545060 | 0.819544 | 1.098252e-52 | -8.615850e-47 |
Msa0141340 | Msa0545060 | 0.814087 | 1.841973e-51 | -8.615850e-47 |
Msa0142950 | Msa0545060 | 0.819223 | 1.300067e-52 | -8.615850e-47 |
Msa0146770 | Msa0545060 | 0.800042 | 1.735203e-48 | -8.615850e-47 |
Msa0154440 | Msa0545060 | 0.805032 | 1.623639e-49 | -8.615850e-47 |
Msa0155330 | Msa0545060 | 0.829110 | 6.183702e-55 | -8.615850e-47 |
Msa0156230 | Msa0545060 | 0.845476 | 3.966715e-59 | -8.615850e-47 |
Msa0160670 | Msa0545060 | 0.804260 | 2.352378e-49 | -8.615850e-47 |
Msa0165300 | Msa0545060 | 0.838487 | 2.792635e-57 | -8.615850e-47 |
Msa0165440 | Msa0545060 | 0.836574 | 8.643049e-57 | -8.615850e-47 |
Msa0171850 | Msa0545060 | 0.824769 | 6.745193e-54 | -8.615850e-47 |
Msa0177210 | Msa0545060 | 0.818845 | 1.584911e-52 | -8.615850e-47 |
Msa0181230 | Msa0545060 | 0.827210 | 1.774221e-54 | -8.615850e-47 |
Msa0185590 | Msa0545060 | 0.828962 | 6.715562e-55 | -8.615850e-47 |
Msa0186890 | Msa0545060 | 0.811587 | 6.496497e-51 | -8.615850e-47 |
Msa0194540 | Msa0545060 | 0.802311 | 5.958201e-49 | -8.615850e-47 |
Msa0197520 | Msa0545060 | 0.819180 | 1.329918e-52 | -8.615850e-47 |
Msa0198520 | Msa0545060 | 0.857238 | 1.870561e-62 | -8.615850e-47 |
Msa0198530 | Msa0545060 | 0.857412 | 1.661156e-62 | -8.615850e-47 |
Msa0208810 | Msa0545060 | 0.825778 | 3.894375e-54 | -8.615850e-47 |
Msa0226470 | Msa0545060 | 0.802465 | 5.538764e-49 | -8.615850e-47 |
Msa0227400 | Msa0545060 | 0.858816 | 6.351329e-63 | -8.615850e-47 |
Msa0231660 | Msa0545060 | 0.801732 | 7.835963e-49 | -8.615850e-47 |
Msa0237200 | Msa0545060 | 0.807471 | 4.972744e-50 | -8.615850e-47 |
Msa0369850 | Msa0545060 | 0.818504 | 1.893454e-52 | -8.615850e-47 |
Msa0372660 | Msa0545060 | 0.822579 | 2.197042e-53 | -8.615850e-47 |
Msa0372670 | Msa0545060 | 0.819743 | 9.893478e-53 | -8.615850e-47 |
Msa0378970 | Msa0545060 | 0.815341 | 9.714997e-52 | -8.615850e-47 |
Msa0379600 | Msa0545060 | 0.805661 | 1.198426e-49 | -8.615850e-47 |
Msa0392200 | Msa0545060 | 0.826838 | 2.177673e-54 | -8.615850e-47 |
Msa0402330 | Msa0545060 | 0.821539 | 3.826490e-53 | -8.615850e-47 |
Msa0413450 | Msa0545060 | 0.823123 | 1.640492e-53 | -8.615850e-47 |
Msa0415810 | Msa0545060 | 0.830483 | 2.863831e-55 | -8.615850e-47 |
Msa0419520 | Msa0545060 | 0.820457 | 6.789680e-53 | -8.615850e-47 |
Msa0428050 | Msa0545060 | 0.831497 | 1.614051e-55 | -8.615850e-47 |
Msa0428170 | Msa0545060 | 0.800373 | 1.485566e-48 | -8.615850e-47 |
Msa0431770 | Msa0545060 | 0.803780 | 2.959929e-49 | -8.615850e-47 |
Msa0439890 | Msa0545060 | 0.811998 | 5.289614e-51 | -8.615850e-47 |
Msa0460930 | Msa0545060 | 0.847822 | 9.067171e-60 | -8.615850e-47 |
Msa0461590 | Msa0545060 | 0.809428 | 1.901869e-50 | -8.615850e-47 |
Msa0462220 | Msa0545060 | 0.804885 | 1.742601e-49 | -8.615850e-47 |
Msa0462880 | Msa0545060 | 0.800438 | 1.441438e-48 | -8.615850e-47 |
Msa0465550 | Msa0545060 | 0.805530 | 1.276964e-49 | -8.615850e-47 |
Msa0467780 | Msa0545060 | 0.819718 | 1.002269e-52 | -8.615850e-47 |
Msa0468800 | Msa0545060 | 0.801527 | 8.633844e-49 | -8.615850e-47 |
Msa0470690 | Msa0545060 | 0.801644 | 8.168872e-49 | -8.615850e-47 |
Msa0474390 | Msa0545060 | 0.808499 | 3.005699e-50 | -8.615850e-47 |
Msa0474590 | Msa0545060 | 0.800788 | 1.223079e-48 | -8.615850e-47 |
Msa0474700 | Msa0545060 | 0.812066 | 5.111932e-51 | -8.615850e-47 |
Msa0479170 | Msa0545060 | 0.821166 | 4.665622e-53 | -8.615850e-47 |
Msa0479200 | Msa0545060 | 0.807972 | 3.892715e-50 | -8.615850e-47 |
Msa0480780 | Msa0545060 | 0.819244 | 1.285583e-52 | -8.615850e-47 |
Msa0481750 | Msa0545060 | 0.805269 | 1.448353e-49 | -8.615850e-47 |
Msa0239450 | Msa0545060 | 0.818323 | 2.081290e-52 | -8.615850e-47 |
Msa0242760 | Msa0545060 | 0.809124 | 2.209266e-50 | -8.615850e-47 |
Msa0245850 | Msa0545060 | 0.843714 | 1.182559e-58 | -8.615850e-47 |
Msa0253290 | Msa0545060 | 0.818845 | 1.584911e-52 | -8.615850e-47 |
Msa0259270 | Msa0545060 | 0.821004 | 5.083185e-53 | -8.615850e-47 |
Msa0260810 | Msa0545060 | 0.803312 | 3.701598e-49 | -8.615850e-47 |
Msa0264780 | Msa0545060 | 0.810168 | 1.317965e-50 | -8.615850e-47 |
Msa0267870 | Msa0545060 | 0.814708 | 1.342455e-51 | -8.615850e-47 |
Msa0271810 | Msa0545060 | 0.828526 | 8.560409e-55 | -8.615850e-47 |
Msa0274970 | Msa0545060 | 0.800714 | 1.266210e-48 | -8.615850e-47 |
Msa0276920 | Msa0545060 | 0.810671 | 1.026657e-50 | -8.615850e-47 |
Msa0278790 | Msa0545060 | 0.836275 | 1.029512e-56 | -8.615850e-47 |
Msa0287310 | Msa0545060 | 0.810396 | 1.176743e-50 | -8.615850e-47 |
Msa0288730 | Msa0545060 | 0.843245 | 1.577188e-58 | -8.615850e-47 |
Msa0291520 | Msa0545060 | 0.842805 | 2.065576e-58 | -8.615850e-47 |
Msa0292120 | Msa0545060 | 0.837838 | 4.103832e-57 | -8.615850e-47 |
Msa0294150 | Msa0545060 | 0.806641 | 7.454009e-50 | -8.615850e-47 |
Msa0295590 | Msa0545060 | 0.813092 | 3.048343e-51 | -8.615850e-47 |
Msa0304290 | Msa0545060 | 0.806607 | 7.579140e-50 | -8.615850e-47 |
Msa0304330 | Msa0545060 | 0.809700 | 1.661835e-50 | -8.615850e-47 |
Msa0305890 | Msa0545060 | 0.805310 | 1.419598e-49 | -8.615850e-47 |
Msa0308550 | Msa0545060 | 0.802810 | 4.700585e-49 | -8.615850e-47 |
Msa0310410 | Msa0545060 | 0.824978 | 6.020322e-54 | -8.615850e-47 |
Msa0317730 | Msa0545060 | 0.823415 | 1.402372e-53 | -8.615850e-47 |
Msa0318720 | Msa0545060 | 0.840263 | 9.662377e-58 | -8.615850e-47 |
Msa0324240 | Msa0545060 | 0.820711 | 5.938221e-53 | -8.615850e-47 |
Msa0325850 | Msa0545060 | 0.812701 | 3.713608e-51 | -8.615850e-47 |
Msa0340810 | Msa0545060 | 0.802920 | 4.461662e-49 | -8.615850e-47 |
Msa0342010 | Msa0545060 | 0.800052 | 1.727031e-48 | -8.615850e-47 |
Msa0343190 | Msa0545060 | 0.803980 | 2.689954e-49 | -8.615850e-47 |
Msa0346990 | Msa0545060 | 0.815368 | 9.579833e-52 | -8.615850e-47 |
Msa0355270 | Msa0545060 | 0.819519 | 1.112896e-52 | -8.615850e-47 |
Msa0358670 | Msa0545060 | 0.801109 | 1.051255e-48 | -8.615850e-47 |
Msa0363620 | Msa0545060 | 0.838298 | 3.124514e-57 | -8.615850e-47 |
Msa0484780 | Msa0545060 | 0.828077 | 1.098540e-54 | -8.615850e-47 |
Msa0484840 | Msa0545060 | 0.814253 | 1.692673e-51 | -8.615850e-47 |
Msa0487780 | Msa0545060 | 0.806465 | 8.118821e-50 | -8.615850e-47 |
Msa0505150 | Msa0545060 | 0.805022 | 1.631315e-49 | -8.615850e-47 |
Msa0505770 | Msa0545060 | 0.832425 | 9.521098e-56 | -8.615850e-47 |
Msa0506890 | Msa0545060 | 0.840647 | 7.666661e-58 | -8.615850e-47 |
Msa0506940 | Msa0545060 | 0.836663 | 8.202309e-57 | -8.615850e-47 |
Msa0509610 | Msa0545060 | 0.819688 | 1.018344e-52 | -8.615850e-47 |
Msa0513440 | Msa0545060 | 0.819853 | 9.335961e-53 | -8.615850e-47 |
Msa0514180 | Msa0545060 | 0.845103 | 5.004883e-59 | -8.615850e-47 |
Msa0515640 | Msa0545060 | 0.817038 | 4.056570e-52 | -8.615850e-47 |
Msa0518440 | Msa0545060 | 0.810395 | 1.177481e-50 | -8.615850e-47 |
Msa0518810 | Msa0545060 | 0.811511 | 6.751509e-51 | -8.615850e-47 |
Msa0521880 | Msa0545060 | 0.815580 | 8.597668e-52 | -8.615850e-47 |
Msa0526890 | Msa0545060 | 0.828672 | 7.891452e-55 | -8.615850e-47 |
Msa0536790 | Msa0545060 | 0.816449 | 5.497775e-52 | -8.615850e-47 |
Msa0541860 | Msa0545060 | 0.811034 | 8.567932e-51 | -8.615850e-47 |
Msa0542160 | Msa0545060 | 0.860284 | 2.299922e-63 | -8.615850e-47 |
Msa0545060 | Msa0546360 | 0.804152 | 2.478157e-49 | -8.615850e-47 |
Msa0545060 | Msa0546680 | 0.805507 | 1.291431e-49 | -8.615850e-47 |
Msa0545060 | Msa0547360 | 0.815885 | 7.351067e-52 | -8.615850e-47 |
Msa0545060 | Msa0547400 | 0.814196 | 1.742741e-51 | -8.615850e-47 |
Msa0545060 | Msa0549590 | 0.802910 | 4.483123e-49 | -8.615850e-47 |
Msa0545060 | Msa0550570 | 0.808487 | 3.023065e-50 | -8.615850e-47 |
Msa0545060 | Msa0556860 | 0.802198 | 6.287169e-49 | -8.615850e-47 |
Msa0545060 | Msa0564590 | 0.801676 | 8.048711e-49 | -8.615850e-47 |
Msa0545060 | Msa0574390 | 0.810709 | 1.007235e-50 | -8.615850e-47 |
Msa0545060 | Msa0576680 | 0.822389 | 2.432071e-53 | -8.615850e-47 |
Msa0545060 | Msa0578090 | 0.828846 | 7.163335e-55 | -8.615850e-47 |
Msa0545060 | Msa0584550 | 0.825291 | 5.078642e-54 | -8.615850e-47 |
Msa0545060 | Msa0586850 | 0.832559 | 8.823104e-56 | -8.615850e-47 |
Msa0545060 | Msa0600600 | 0.901927 | 1.631254e-78 | -8.615850e-47 |
Msa0545060 | Msa0602120 | 0.813011 | 3.175592e-51 | -8.615850e-47 |
Msa0545060 | Msa0603670 | 0.821802 | 3.326033e-53 | -8.615850e-47 |
Msa0545060 | Msa0610500 | 0.832206 | 1.078810e-55 | -8.615850e-47 |
Msa0545060 | Msa0617580 | 0.824455 | 7.997854e-54 | -8.615850e-47 |
Msa0545060 | Msa0618950 | 0.810330 | 1.216471e-50 | -8.615850e-47 |
Msa0545060 | Msa0619920 | 0.822324 | 2.517133e-53 | -8.615850e-47 |
Msa0545060 | Msa0620330 | 0.802963 | 4.371581e-49 | -8.615850e-47 |
Msa0545060 | Msa0626680 | 0.823771 | 1.157670e-53 | -8.615850e-47 |
Msa0545060 | Msa0641140 | 0.916188 | 2.405678e-85 | -8.615850e-47 |
Msa0545060 | Msa0643250 | 0.808159 | 3.552070e-50 | -8.615850e-47 |
Msa0545060 | Msa0651150 | 0.838291 | 3.138570e-57 | -8.615850e-47 |
Msa0545060 | Msa0652300 | 0.813064 | 3.092076e-51 | -8.615850e-47 |
Msa0545060 | Msa0652690 | 0.817187 | 3.755955e-52 | -8.615850e-47 |
Msa0545060 | Msa0654870 | 0.802305 | 5.975790e-49 | -8.615850e-47 |
Msa0545060 | Msa0656580 | 0.843642 | 1.235755e-58 | -8.615850e-47 |
Msa0545060 | Msa0659990 | 0.805250 | 1.461642e-49 | -8.615850e-47 |
Msa0545060 | Msa0664760 | 0.825163 | 5.445900e-54 | -8.615850e-47 |
Msa0545060 | Msa0667790 | 0.805259 | 1.455435e-49 | -8.615850e-47 |
Msa0545060 | Msa0675990 | 0.816490 | 5.384237e-52 | -8.615850e-47 |
Msa0545060 | Msa0677080 | 0.807693 | 4.461593e-50 | -8.615850e-47 |
Msa0545060 | Msa0679100 | 0.811604 | 6.442540e-51 | -8.615850e-47 |
Msa0545060 | Msa0679680 | 0.929600 | 5.503157e-93 | -8.615850e-47 |
Msa0545060 | Msa0682330 | 0.802940 | 4.418763e-49 | -8.615850e-47 |
Msa0545060 | Msa0682900 | 0.819391 | 1.190667e-52 | -8.615850e-47 |
Msa0545060 | Msa0691900 | 0.800242 | 1.579730e-48 | -8.615850e-47 |
Msa0545060 | Msa0693380 | 0.820172 | 7.894190e-53 | -8.615850e-47 |
Msa0545060 | Msa0694840 | 0.803438 | 3.485545e-49 | -8.615850e-47 |
Msa0545060 | Msa0695130 | 0.802130 | 6.493237e-49 | -8.615850e-47 |
Msa0545060 | Msa0703230 | 0.815687 | 8.138158e-52 | -8.615850e-47 |
Msa0545060 | Msa0704600 | 0.806343 | 8.613848e-50 | -8.615850e-47 |
Msa0545060 | Msa0704800 | 0.819209 | 1.309599e-52 | -8.615850e-47 |
Msa0545060 | Msa0706390 | 0.817174 | 3.780553e-52 | -8.615850e-47 |
Msa0545060 | Msa0708520 | 0.804553 | 2.044270e-49 | -8.615850e-47 |
Msa0545060 | Msa0710270 | 0.800033 | 1.742387e-48 | -8.615850e-47 |
Msa0545060 | Msa0724830 | 0.810853 | 9.376922e-51 | -8.615850e-47 |
Msa0545060 | Msa0726080 | 0.811213 | 7.832715e-51 | -8.615850e-47 |
Msa0545060 | Msa0735310 | 0.815340 | 9.722144e-52 | -8.615850e-47 |
Msa0545060 | Msa0737570 | 0.805568 | 1.253845e-49 | -8.615850e-47 |
Msa0545060 | Msa0737800 | 0.800730 | 1.256497e-48 | -8.615850e-47 |
Msa0545060 | Msa0743680 | 0.808209 | 3.466060e-50 | -8.615850e-47 |
Msa0545060 | Msa0744030 | 0.839446 | 1.576839e-57 | -8.615850e-47 |
Msa0545060 | Msa0744040 | 0.839335 | 1.685528e-57 | -8.615850e-47 |
Msa0545060 | Msa0744090 | 0.830997 | 2.142265e-55 | -8.615850e-47 |
Msa0545060 | Msa0744100 | 0.822159 | 2.749337e-53 | -8.615850e-47 |
Msa0545060 | Msa0745200 | 0.804238 | 2.378138e-49 | -8.615850e-47 |
Msa0545060 | Msa0750920 | 0.805627 | 1.218454e-49 | -8.615850e-47 |
Msa0545060 | Msa0756530 | 0.819157 | 1.345761e-52 | -8.615850e-47 |
Msa0545060 | Msa0756930 | 0.802409 | 5.686504e-49 | -8.615850e-47 |
Msa0545060 | Msa0781270 | 0.829037 | 6.441041e-55 | -8.615850e-47 |
Msa0545060 | Msa0784380 | 0.821986 | 3.015492e-53 | -8.615850e-47 |
Msa0545060 | Msa0784620 | 0.807553 | 4.778437e-50 | -8.615850e-47 |
Msa0545060 | Msa0787850 | 0.816390 | 5.669788e-52 | -8.615850e-47 |
Msa0545060 | Msa0788110 | 0.805604 | 1.231890e-49 | -8.615850e-47 |
Msa0545060 | Msa0788120 | 0.813122 | 3.002817e-51 | -8.615850e-47 |
Msa0545060 | Msa0795660 | 0.826132 | 3.207844e-54 | -8.615850e-47 |
Msa0545060 | Msa0796440 | 0.807309 | 5.383737e-50 | -8.615850e-47 |
Msa0545060 | Msa0800270 | 0.808418 | 3.127265e-50 | -8.615850e-47 |
Msa0545060 | Msa0814250 | 0.803338 | 3.655702e-49 | -8.615850e-47 |
Msa0545060 | Msa0814320 | 0.832150 | 1.114062e-55 | -8.615850e-47 |
Msa0545060 | Msa0817270 | 0.800301 | 1.536466e-48 | -8.615850e-47 |
Msa0545060 | Msa0819560 | 0.807667 | 4.520281e-50 | -8.615850e-47 |
Msa0545060 | Msa0824660 | 0.833929 | 4.020323e-56 | -8.615850e-47 |
Msa0545060 | Msa0824730 | 0.808791 | 2.602926e-50 | -8.615850e-47 |
Msa0545060 | Msa0825270 | 0.820736 | 5.859505e-53 | -8.615850e-47 |
Msa0545060 | Msa0825280 | 0.833330 | 5.675498e-56 | -8.615850e-47 |
Msa0545060 | Msa0830390 | 0.805091 | 1.577891e-49 | -8.615850e-47 |
Msa0545060 | Msa0838260 | 0.814884 | 1.227041e-51 | -8.615850e-47 |
Msa0545060 | Msa0844230 | 0.824919 | 6.218187e-54 | -8.615850e-47 |
Msa0545060 | Msa0846230 | 0.806250 | 9.012698e-50 | -8.615850e-47 |
Msa0545060 | Msa0849200 | 0.818388 | 2.012219e-52 | -8.615850e-47 |
Msa0545060 | Msa0850710 | 0.818024 | 2.432428e-52 | -8.615850e-47 |
Msa0545060 | Msa0850960 | 0.808257 | 3.384777e-50 | -8.615850e-47 |
Msa0545060 | Msa0851470 | 0.826815 | 2.205026e-54 | -8.615850e-47 |
Msa0545060 | Msa0853120 | 0.801176 | 1.018535e-48 | -8.615850e-47 |
Msa0545060 | Msa0856920 | 0.819223 | 1.300112e-52 | -8.615850e-47 |
Msa0545060 | Msa0859180 | 0.806140 | 9.503831e-50 | -8.615850e-47 |
Msa0545060 | Msa0863370 | 0.809231 | 2.095385e-50 | -8.615850e-47 |
Msa0545060 | Msa0863930 | 0.848284 | 6.761970e-60 | -8.615850e-47 |
Msa0545060 | Msa0865570 | 0.811568 | 6.561300e-51 | -8.615850e-47 |
Msa0545060 | Msa0869100 | 0.805808 | 1.116054e-49 | -8.615850e-47 |
Msa0545060 | Msa0873860 | 0.808171 | 3.530551e-50 | -8.615850e-47 |
Msa0545060 | Msa0876060 | 0.800633 | 1.315216e-48 | -8.615850e-47 |
Msa0545060 | Msa0881580 | 0.812432 | 4.252840e-51 | -8.615850e-47 |
Msa0545060 | Msa0888940 | 0.830610 | 2.665316e-55 | -8.615850e-47 |
Msa0545060 | Msa0897400 | 0.837455 | 5.146662e-57 | -8.615850e-47 |
Msa0545060 | Msa0899350 | 0.829317 | 5.509100e-55 | -8.615850e-47 |
Msa0545060 | Msa0901450 | 0.809388 | 1.939399e-50 | -8.615850e-47 |
Msa0545060 | Msa0906690 | 0.842183 | 3.021763e-58 | -8.615850e-47 |
Msa0545060 | Msa0920610 | 0.804940 | 1.696940e-49 | -8.615850e-47 |
Msa0545060 | Msa0933310 | 0.800970 | 1.122662e-48 | -8.615850e-47 |
Msa0545060 | Msa0933440 | 0.814786 | 1.290117e-51 | -8.615850e-47 |
Msa0545060 | Msa0939000 | 0.835536 | 1.585025e-56 | -8.615850e-47 |
Msa0545060 | Msa0944660 | 0.810732 | 9.959164e-51 | -8.615850e-47 |
Msa0545060 | Msa0945240 | 0.818694 | 1.715140e-52 | -8.615850e-47 |
Msa0545060 | Msa0955190 | 0.803329 | 3.671362e-49 | -8.615850e-47 |
Msa0545060 | Msa0957870 | 0.800871 | 1.175809e-48 | -8.615850e-47 |
Msa0545060 | Msa0957970 | 0.810148 | 1.331187e-50 | -8.615850e-47 |
Msa0545060 | Msa0963020 | 0.834249 | 3.343196e-56 | -8.615850e-47 |
Msa0545060 | Msa0968590 | 0.803017 | 4.260224e-49 | -8.615850e-47 |
Msa0545060 | Msa0970320 | 0.806119 | 9.604255e-50 | -8.615850e-47 |
Msa0545060 | Msa0972590 | 0.801817 | 7.529103e-49 | -8.615850e-47 |
Msa0545060 | Msa0975940 | 0.813609 | 2.347499e-51 | -8.615850e-47 |
Msa0545060 | Msa0980940 | 0.851955 | 6.334821e-61 | -8.615850e-47 |
Msa0545060 | Msa0981430 | 0.810962 | 8.877474e-51 | -8.615850e-47 |
Msa0545060 | Msa0986920 | 0.800599 | 1.336309e-48 | -8.615850e-47 |
Msa0545060 | Msa0990590 | 0.817018 | 4.098914e-52 | -8.615850e-47 |
Msa0545060 | Msa0997430 | 0.815666 | 8.223287e-52 | -8.615850e-47 |
Msa0545060 | Msa1001350 | 0.825366 | 4.874418e-54 | -8.615850e-47 |
Msa0545060 | Msa1004420 | 0.819479 | 1.136534e-52 | -8.615850e-47 |
Msa0545060 | Msa1009750 | 0.802435 | 5.619135e-49 | -8.615850e-47 |
Msa0545060 | Msa1010070 | 0.802461 | 5.550354e-49 | -8.615850e-47 |
Msa0545060 | Msa1014420 | 0.831962 | 1.239908e-55 | -8.615850e-47 |
Msa0545060 | Msa1024090 | 0.822775 | 1.978198e-53 | -8.615850e-47 |
Msa0545060 | Msa1025260 | 0.830084 | 3.582899e-55 | -8.615850e-47 |
Msa0545060 | Msa1025940 | 0.812713 | 3.690916e-51 | -8.615850e-47 |
Msa0545060 | Msa1029970 | 0.811900 | 5.553577e-51 | -8.615850e-47 |
Msa0545060 | Msa1030930 | 0.803892 | 2.806825e-49 | -8.615850e-47 |
Msa0545060 | Msa1031770 | 0.808306 | 3.304407e-50 | -8.615850e-47 |
Msa0545060 | Msa1035300 | 0.801355 | 9.365528e-49 | -8.615850e-47 |
Msa0545060 | Msa1037650 | -0.806443 | 8.207286e-50 | -8.615850e-47 |
Msa0545060 | Msa1040800 | 0.815398 | 9.436818e-52 | -8.615850e-47 |
Msa0545060 | Msa1040840 | 0.828769 | 7.476212e-55 | -8.615850e-47 |
Msa0545060 | Msa1040890 | 0.812770 | 3.586067e-51 | -8.615850e-47 |
Msa0545060 | Msa1041210 | 0.842618 | 2.317129e-58 | -8.615850e-47 |
Msa0545060 | Msa1041520 | 0.873694 | 1.205577e-67 | -8.615850e-47 |
Msa0545060 | Msa1050420 | 0.824406 | 8.211824e-54 | -8.615850e-47 |
Msa0545060 | Msa1051600 | 0.821204 | 4.572897e-53 | -8.615850e-47 |
Msa0545060 | Msa1054010 | 0.807916 | 4.001646e-50 | -8.615850e-47 |
Msa0545060 | Msa1055410 | 0.808093 | 3.667708e-50 | -8.615850e-47 |
Msa0545060 | Msa1063960 | 0.804656 | 1.945296e-49 | -8.615850e-47 |
Msa0545060 | Msa1071770 | 0.804822 | 1.796260e-49 | -8.615850e-47 |
Msa0545060 | Msa1080800 | 0.811918 | 5.504635e-51 | -8.615850e-47 |
Msa0545060 | Msa1081560 | 0.877246 | 7.328821e-69 | -8.615850e-47 |
Msa0545060 | Msa1082500 | 0.802631 | 5.118074e-49 | -8.615850e-47 |
Msa0545060 | Msa1082690 | 0.808998 | 2.350863e-50 | -8.615850e-47 |
Msa0545060 | Msa1083210 | 0.842389 | 2.663728e-58 | -8.615850e-47 |
Msa0545060 | Msa1083750 | 0.800762 | 1.238025e-48 | -8.615850e-47 |
Msa0545060 | Msa1083880 | 0.812472 | 4.167920e-51 | -8.615850e-47 |
Msa0545060 | Msa1093330 | 0.830901 | 2.262001e-55 | -8.615850e-47 |
Msa0545060 | Msa1097820 | 0.808799 | 2.593610e-50 | -8.615850e-47 |
Msa0545060 | Msa1102770 | 0.813977 | 1.947818e-51 | -8.615850e-47 |
Msa0545060 | Msa1109350 | 0.829412 | 5.221817e-55 | -8.615850e-47 |
Msa0545060 | Msa1118940 | 0.826872 | 2.137271e-54 | -8.615850e-47 |
Msa0545060 | Msa1124310 | 0.801959 | 7.039622e-49 | -8.615850e-47 |
Msa0545060 | Msa1125470 | 0.825227 | 5.259476e-54 | -8.615850e-47 |
Msa0545060 | Msa1125550 | 0.828549 | 8.451124e-55 | -8.615850e-47 |
Msa0545060 | Msa1126450 | 0.819870 | 9.253300e-53 | -8.615850e-47 |
Msa0545060 | Msa1127130 | 0.861653 | 8.821286e-64 | -8.615850e-47 |
Msa0545060 | Msa1127830 | 0.838062 | 3.593289e-57 | -8.615850e-47 |
Msa0545060 | Msa1127890 | 0.825066 | 5.740610e-54 | -8.615850e-47 |
Msa0545060 | Msa1128330 | 0.816380 | 5.697934e-52 | -8.615850e-47 |
Msa0545060 | Msa1128660 | 0.801403 | 9.152115e-49 | -8.615850e-47 |
Msa0545060 | Msa1133400 | 0.841024 | 6.105523e-58 | -8.615850e-47 |
Msa0545060 | Msa1145240 | 0.817801 | 2.731446e-52 | -8.615850e-47 |
Msa0545060 | Msa1151000 | 0.803568 | 3.276231e-49 | -8.615850e-47 |
Msa0545060 | Msa1158230 | 0.800802 | 1.214772e-48 | -8.615850e-47 |
Msa0545060 | Msa1158660 | 0.811379 | 7.212269e-51 | -8.615850e-47 |
Msa0545060 | Msa1162830 | 0.816515 | 5.314488e-52 | -8.615850e-47 |
Msa0545060 | Msa1164590 | 0.810117 | 1.352091e-50 | -8.615850e-47 |
Msa0545060 | Msa1165520 | 0.812068 | 5.106991e-51 | -8.615850e-47 |
Msa0545060 | Msa1165740 | 0.822442 | 2.364157e-53 | -8.615850e-47 |
Msa0545060 | Msa1166410 | 0.876452 | 1.380445e-68 | -8.615850e-47 |
Msa0545060 | Msa1171830 | 0.813063 | 3.094046e-51 | -8.615850e-47 |
Msa0545060 | Msa1172640 | 0.807332 | 5.324099e-50 | -8.615850e-47 |
Msa0545060 | Msa1174100 | 0.860108 | 2.599014e-63 | -8.615850e-47 |
Msa0545060 | Msa1174530 | 0.806032 | 1.001773e-49 | -8.615850e-47 |
Msa0545060 | Msa1174850 | 0.809189 | 2.140186e-50 | -8.615850e-47 |
Msa0545060 | Msa1178050 | 0.802124 | 6.511873e-49 | -8.615850e-47 |
Msa0545060 | Msa1179950 | 0.813317 | 2.721771e-51 | -8.615850e-47 |
Msa0545060 | Msa1179980 | 0.815820 | 7.598080e-52 | -8.615850e-47 |
Msa0545060 | Msa1184370 | 0.819020 | 1.445817e-52 | -8.615850e-47 |
Msa0545060 | Msa1187840 | 0.801734 | 7.827783e-49 | -8.615850e-47 |
Msa0545060 | Msa1198880 | 0.804058 | 2.592392e-49 | -8.615850e-47 |
Msa0545060 | Msa1201830 | 0.818833 | 1.594469e-52 | -8.615850e-47 |
Msa0545060 | Msa1205370 | 0.813095 | 3.043821e-51 | -8.615850e-47 |
Msa0545060 | Msa1206160 | 0.827321 | 1.669000e-54 | -8.615850e-47 |
Msa0545060 | Msa1207730 | 0.802058 | 6.717191e-49 | -8.615850e-47 |
Msa0545060 | Msa1216720 | 0.812350 | 4.431504e-51 | -8.615850e-47 |
Msa0545060 | Msa1218600 | 0.807925 | 3.982694e-50 | -8.615850e-47 |
Msa0545060 | Msa1227690 | 0.821475 | 3.959600e-53 | -8.615850e-47 |
Msa0545060 | Msa1235250 | 0.833296 | 5.787450e-56 | -8.615850e-47 |
Msa0545060 | Msa1254710 | 0.845155 | 4.843942e-59 | -8.615850e-47 |
Msa0545060 | Msa1270620 | 0.808307 | 3.302362e-50 | -8.615850e-47 |
Msa0545060 | Msa1270690 | 0.813316 | 2.722124e-51 | -8.615850e-47 |
Msa0545060 | Msa1276660 | 0.816164 | 6.366880e-52 | -8.615850e-47 |
Msa0545060 | Msa1280620 | 0.812415 | 4.289666e-51 | -8.615850e-47 |
Msa0545060 | Msa1294840 | 0.830990 | 2.151212e-55 | -8.615850e-47 |
Msa0545060 | Msa1294960 | 0.805074 | 1.591232e-49 | -8.615850e-47 |
Msa0545060 | Msa1295910 | 0.829719 | 4.398752e-55 | -8.615850e-47 |
Msa0545060 | Msa1306390 | 0.805293 | 1.431561e-49 | -8.615850e-47 |
Msa0545060 | Msa1306990 | 0.826549 | 2.552126e-54 | -8.615850e-47 |
Msa0545060 | Msa1307950 | 0.801785 | 7.641643e-49 | -8.615850e-47 |
Msa0545060 | Msa1311960 | 0.850855 | 1.295994e-60 | -8.615850e-47 |
Msa0545060 | Msa1316830 | 0.800227 | 1.591155e-48 | -8.615850e-47 |
Msa0545060 | Msa1332870 | -0.801055 | 1.078269e-48 | -8.615850e-47 |
Msa0545060 | Msa1340040 | -0.809182 | 2.146853e-50 | -8.615850e-47 |
Msa0545060 | Msa1346750 | 0.812386 | 4.352170e-51 | -8.615850e-47 |
Msa0545060 | Msa1348880 | 0.806105 | 9.669991e-50 | -8.615850e-47 |
Msa0545060 | Msa1355700 | 0.825905 | 3.632229e-54 | -8.615850e-47 |
Msa0545060 | Msa1356440 | 0.800761 | 1.238247e-48 | -8.615850e-47 |
Msa0545060 | Msa1359390 | 0.801349 | 9.391894e-49 | -8.615850e-47 |
Msa0545060 | Msa1359560 | 0.806762 | 7.028647e-50 | -8.615850e-47 |
Msa0545060 | Msa1360180 | 0.801621 | 8.259940e-49 | -8.615850e-47 |
Msa0545060 | Msa1366600 | 0.834614 | 2.707210e-56 | -8.615850e-47 |
Msa0545060 | Msa1368430 | 0.813023 | 3.157174e-51 | -8.615850e-47 |
Msa0545060 | Msa1370620 | 0.829375 | 5.333446e-55 | -8.615850e-47 |
Msa0545060 | Msa1371640 | 0.805636 | 1.213269e-49 | -8.615850e-47 |
Msa0545060 | Msa1372310 | 0.817980 | 2.488631e-52 | -8.615850e-47 |
Msa0545060 | Msa1375680 | 0.808912 | 2.452308e-50 | -8.615850e-47 |
Msa0545060 | Msa1376200 | 0.825584 | 4.329299e-54 | -8.615850e-47 |
Msa0545060 | Msa1380970 | 0.827316 | 1.673497e-54 | -8.615850e-47 |
Msa0545060 | Msa1383230 | 0.818796 | 1.625459e-52 | -8.615850e-47 |
Msa0545060 | Msa1384870 | 0.809491 | 1.843437e-50 | -8.615850e-47 |
Msa0545060 | Msa1386230 | 0.835295 | 1.823896e-56 | -8.615850e-47 |
Msa0545060 | Msa1389680 | 0.808599 | 2.861716e-50 | -8.615850e-47 |
Msa0545060 | Msa1389850 | 0.802913 | 4.477720e-49 | -8.615850e-47 |
Msa0545060 | Msa1390230 | 0.855867 | 4.729019e-62 | -8.615850e-47 |
Msa0545060 | Msa1397810 | 0.802958 | 4.382085e-49 | -8.615850e-47 |
Msa0545060 | Msa1404540 | 0.813879 | 2.047347e-51 | -8.615850e-47 |
Msa0545060 | Msa1409260 | 0.805423 | 1.344778e-49 | -8.615850e-47 |
Msa0545060 | Msa1415940 | 0.842459 | 2.553313e-58 | -8.615850e-47 |
Msa0545060 | Msa1423350 | 0.810903 | 9.145217e-51 | -8.615850e-47 |
Msa0545060 | Msa1424780 | 0.826056 | 3.344672e-54 | -8.615850e-47 |
Msa0545060 | Msa1427060 | 0.845669 | 3.516731e-59 | -8.615850e-47 |
Msa0545060 | Msa1431060 | 0.813992 | 1.932748e-51 | -8.615850e-47 |
Msa0545060 | Msa1435770 | 0.800154 | 1.646404e-48 | -8.615850e-47 |
Msa0545060 | Msa1438640 | 0.800781 | 1.226938e-48 | -8.615850e-47 |
Msa0545060 | Msa1442850 | 0.809454 | 1.877640e-50 | -8.615850e-47 |
Msa0545060 | Msa1443930 | 0.825913 | 3.617548e-54 | -8.615850e-47 |
Msa0545060 | Msa1452480 | 0.826279 | 2.959257e-54 | -8.615850e-47 |
Msa0545060 | Msa1460020 | 0.823617 | 1.258001e-53 | -8.615850e-47 |
Msa0545060 | Msa1466090 | 0.814576 | 1.435888e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0545060 | MtrunA17_Chr4g0025631 | 92.857 | 336 | 24 | 0 | 1 | 336 | 42 | 377 | 0.0 | 607 |
Msa0545060 | MtrunA17_Chr8g0378681 | 78.994 | 338 | 64 | 3 | 1 | 336 | 2 | 334 | 0.0 | 511 |
Msa0545060 | MtrunA17_Chr1g0197131 | 84.962 | 133 | 20 | 0 | 204 | 336 | 1 | 133 | 2.68e-77 | 233 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0545060 | AT5G38720.1 | 66.443 | 149 | 49 | 1 | 189 | 336 | 158 | 306 | 3.99e-70 | 221 |
Msa0545060 | AT5G38720.3 | 66.443 | 149 | 49 | 1 | 189 | 336 | 165 | 313 | 5.14e-70 | 221 |
Msa0545060 | AT5G38720.2 | 66.443 | 149 | 49 | 1 | 189 | 336 | 177 | 325 | 3.35e-69 | 219 |
Find 58 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCTTTATAATCTCCATTTC+AGG | 0.167824 | 4_1:+34495773 | None:intergenic |
ATTAGAATCTCTGTGCTTCT+TGG | 0.245269 | 4_1:+34495505 | None:intergenic |
TCTAAATCAACTTCATCTTC+TGG | 0.321764 | 4_1:+34495680 | None:intergenic |
TGTCCTTGTTCTTCCTTCTT+CGG | 0.356153 | 4_1:+34496471 | None:intergenic |
GCAGCTTGTAAAGGGGAAAA+AGG | 0.361208 | 4_1:-34496510 | Msa0545060:CDS |
TCCTGAAATGGAGATTATAA+AGG | 0.363253 | 4_1:-34495774 | Msa0545060:CDS |
GACATTCATATTATTTCCTC+TGG | 0.367904 | 4_1:-34495297 | Msa0545060:CDS |
AGCTGATCTAGAGAATAAAT+TGG | 0.369163 | 4_1:-34493002 | Msa0545060:CDS |
GTTGATTTAGAAGAGCAAAA+TGG | 0.379449 | 4_1:-34495668 | Msa0545060:intron |
GTTGATTTAGAAGAGCAAAA+TGG | 0.379449 | 4_1:-34495950 | Msa0545060:intron |
AGTAGCAGCATCATTTAATA+AGG | 0.401324 | 4_1:+34492242 | None:intergenic |
AAGCTACTACTAGTCGAAAA+AGG | 0.402492 | 4_1:-34495739 | Msa0545060:CDS |
CCAACCCAGGTCTACTTTGA+TGG | 0.402517 | 4_1:+34494771 | None:intergenic |
ATGGTAAATGAACAAAGTTT+AGG | 0.416655 | 4_1:+34492135 | None:intergenic |
TGTTTCAGTGGATCCTGAAA+TGG | 0.428608 | 4_1:-34495786 | Msa0545060:intron |
AAAAGAGAAGCTCAGAGAAA+TGG | 0.446445 | 4_1:-34492932 | Msa0545060:intron |
ACTATAGCAGCCAAGGTTCA+TGG | 0.450385 | 4_1:-34492222 | Msa0545060:three_prime_UTR |
ACAAAGTTTAGGAATCATAA+AGG | 0.459554 | 4_1:+34492146 | None:intergenic |
CCTGAAATGGAGATTATAAA+GGG | 0.465886 | 4_1:-34495773 | Msa0545060:CDS |
AGTTCTAAAATCACCAGAAA+AGG | 0.474585 | 4_1:-34495340 | Msa0545060:CDS |
AAGTGGGATTGCTGTGGGCT+CGG | 0.474663 | 4_1:-34493032 | Msa0545060:CDS |
AAAGGCAGAACAAAATCATC+AGG | 0.476614 | 4_1:-34495322 | Msa0545060:CDS |
GGAGATTATAAAGGGAAGAA+AGG | 0.484365 | 4_1:-34495765 | Msa0545060:CDS |
GGAATTGCAGAGCAAATTTG+AGG | 0.494356 | 4_1:-34492312 | Msa0545060:CDS |
AGATAAGAAGAAAAGAAGAA+AGG | 0.498367 | 4_1:-34495364 | Msa0545060:CDS |
TCAAACTGCAGAGTGGATCA+TGG | 0.512454 | 4_1:-34494798 | Msa0545060:intron |
TGATCACGGGATGCAAGTTA+CGG | 0.516984 | 4_1:-34496062 | Msa0545060:CDS |
TGGTTGTTTCAGTTGATCAC+GGG | 0.517139 | 4_1:-34496075 | Msa0545060:intron |
CCATCAAAGTAGACCTGGGT+TGG | 0.520897 | 4_1:-34494771 | Msa0545060:CDS |
AAAACTACCGACTCTGAAAG+TGG | 0.527900 | 4_1:-34493049 | Msa0545060:CDS |
AATGATGTCAGATGGAATAG+TGG | 0.531547 | 4_1:-34495564 | Msa0545060:intron |
CTCTGAAAGTGGGATTGCTG+TGG | 0.532604 | 4_1:-34493038 | Msa0545060:CDS |
TCAAAGTAGACCTGGGTTGG+AGG | 0.539427 | 4_1:-34494768 | Msa0545060:CDS |
AAAGAAGCCCTTGCTGCAGA+AGG | 0.540425 | 4_1:-34493109 | Msa0545060:CDS |
TTGGTTGTTTCAGTTGATCA+CGG | 0.550128 | 4_1:-34496076 | Msa0545060:intron |
GGAGATGATGACTGCTCACA+TGG | 0.561999 | 4_1:-34495276 | Msa0545060:CDS |
TGCTGCTACTATAGCAGCCA+AGG | 0.563515 | 4_1:-34492229 | Msa0545060:three_prime_UTR |
GAATACCATCAAAGTAGACC+TGG | 0.568338 | 4_1:-34494776 | Msa0545060:CDS |
TCTGAAAGTGGGATTGCTGT+GGG | 0.573818 | 4_1:-34493037 | Msa0545060:CDS |
AAGAAGCCCTTGCTGCAGAA+GGG | 0.579858 | 4_1:-34493108 | Msa0545060:CDS |
ACATAGTGATTCTAAAGAAG+AGG | 0.580245 | 4_1:-34495540 | Msa0545060:CDS |
AAGAAAAGAACCATGAACCT+TGG | 0.583012 | 4_1:+34492212 | None:intergenic |
AGAAGCCCTTGCTGCAGAAG+GGG | 0.584522 | 4_1:-34493107 | Msa0545060:CDS |
GTTGTTGTAGAAGAGCAAAA+TGG | 0.586388 | 4_1:-34496410 | Msa0545060:intron |
AAGTTATTACTATCCGAAGA+AGG | 0.599313 | 4_1:-34496484 | Msa0545060:CDS |
GACGGTGGTTCAACACCACA+AGG | 0.613486 | 4_1:-34493080 | Msa0545060:CDS |
AAACTACCGACTCTGAAAGT+GGG | 0.614607 | 4_1:-34493048 | Msa0545060:CDS |
CACGGGATGCAAGTTACGGA+GGG | 0.615938 | 4_1:-34496058 | Msa0545060:CDS |
AGCAATCCCACTTTCAGAGT+CGG | 0.619196 | 4_1:+34493042 | None:intergenic |
TGGTTCAACACCACAAGGGT+AGG | 0.619462 | 4_1:-34493075 | Msa0545060:CDS |
GAAGCCCTTGCTGCAGAAGG+GGG | 0.628790 | 4_1:-34493106 | Msa0545060:CDS |
TGCAGCAGTTGAGAGCTGCT+AGG | 0.640397 | 4_1:-34492274 | Msa0545060:CDS |
TCACGGGATGCAAGTTACGG+AGG | 0.659404 | 4_1:-34496059 | Msa0545060:CDS |
AATACCATCAAAGTAGACCT+GGG | 0.679517 | 4_1:-34494775 | Msa0545060:CDS |
TGAGCAGTCATCATCTCCAG+AGG | 0.681253 | 4_1:+34495281 | None:intergenic |
TATCCGAAGAAGGAAGAACA+AGG | 0.684569 | 4_1:-34496474 | Msa0545060:CDS |
AGACTATTTAACTACATACG+AGG | 0.724184 | 4_1:-34494726 | Msa0545060:CDS |
ACGGTGGTTCAACACCACAA+GGG | 0.755501 | 4_1:-34493079 | Msa0545060:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTAGTTTATGAAATATTA+GGG | - | chr4_1:34495897-34495916 | Msa0545060:intron | 10.0% |
!! | TGTATATTTATTGTTATACA+TGG | - | chr4_1:34493670-34493689 | Msa0545060:intron | 15.0% |
!!! | TGTTGGAAAATATTTTATTT+AGG | - | chr4_1:34494051-34494070 | Msa0545060:intron | 15.0% |
!!! | GTTGGAAAATATTTTATTTA+GGG | - | chr4_1:34494052-34494071 | Msa0545060:intron | 15.0% |
!!! | AACTTCTTTATTTTTCTTTT+TGG | + | chr4_1:34495587-34495606 | None:intergenic | 15.0% |
!! | AAAAAGAAAAATAAAGAAGT+TGG | - | chr4_1:34495586-34495605 | Msa0545060:intron | 15.0% |
!! | AAATCATAAACATGTTAATT+AGG | - | chr4_1:34495804-34495823 | Msa0545060:intron | 15.0% |
!! | AATCATAAACATGTTAATTA+GGG | - | chr4_1:34495805-34495824 | Msa0545060:intron | 15.0% |
!!! | CTTTTAGTTTATGAAATATT+AGG | - | chr4_1:34495896-34495915 | Msa0545060:intron | 15.0% |
!!! | ACAAATATTTTTGACAAAAT+TGG | + | chr4_1:34496455-34496474 | None:intergenic | 15.0% |
!! | CAAAAATATTTGTAAATGTA+AGG | - | chr4_1:34496462-34496481 | Msa0545060:CDS | 15.0% |
!! | TATTGTGAATAATAATTTCG+TGG | + | chr4_1:34492224-34492243 | None:intergenic | 20.0% |
!!! | GAATTTTCTCTGAAATAAAT+CGG | - | chr4_1:34492753-34492772 | Msa0545060:intron | 20.0% |
!! | TATACATATACATACAGTAA+TGG | - | chr4_1:34493487-34493506 | Msa0545060:intron | 20.0% |
!! | AAGAATAATGGTAAACAATA+TGG | + | chr4_1:34493600-34493619 | None:intergenic | 20.0% |
!!! | TAATTATATAGCTTTTGACT+TGG | - | chr4_1:34493736-34493755 | Msa0545060:intron | 20.0% |
!!! | AATTATATAGCTTTTGACTT+GGG | - | chr4_1:34493737-34493756 | Msa0545060:intron | 20.0% |
!!! | CTTTTACAAGTTATTTTTCA+AGG | + | chr4_1:34494108-34494127 | None:intergenic | 20.0% |
!! | TCAAAATAAGGAACAAATAT+GGG | + | chr4_1:34495391-34495410 | None:intergenic | 20.0% |
!! | ATCAAAATAAGGAACAAATA+TGG | + | chr4_1:34495392-34495411 | None:intergenic | 20.0% |
!!! | ATTTCCATGCAATTATTTTT+TGG | - | chr4_1:34495410-34495429 | Msa0545060:intron | 20.0% |
!! | TTACCTAGGATATAAAAATA+TGG | + | chr4_1:34495683-34495702 | None:intergenic | 20.0% |
!! | ATCATAAACATGTTAATTAG+GGG | - | chr4_1:34495806-34495825 | Msa0545060:intron | 20.0% |
!! | AATGAATCCTTTATACTATT+AGG | + | chr4_1:34495962-34495981 | None:intergenic | 20.0% |
!! | TCATAGAAACAAAGATATTA+GGG | + | chr4_1:34496011-34496030 | None:intergenic | 20.0% |
!! | ATCATAGAAACAAAGATATT+AGG | + | chr4_1:34496012-34496031 | None:intergenic | 20.0% |
!!! | TATTTTTGACAAAATTGGAA+TGG | + | chr4_1:34496450-34496469 | None:intergenic | 20.0% |
! | TATTCACAATATCTTGAAGT+CGG | - | chr4_1:34492233-34492252 | Msa0545060:three_prime_UTR | 25.0% |
!! | TCGTGACATTTAGTATTTTT+CGG | - | chr4_1:34492366-34492385 | Msa0545060:intron | 25.0% |
! | TGAAACAACCAATTCATATA+GGG | + | chr4_1:34492479-34492498 | None:intergenic | 25.0% |
!!! | TGTCCTTGTTTTTCTTTTTT+CGG | + | chr4_1:34492555-34492574 | None:intergenic | 25.0% |
!!! | AATGTGTTATGTTTTTGTAC+TGG | - | chr4_1:34492718-34492737 | Msa0545060:intron | 25.0% |
! | GAAAAATTCTATGAGGAAAA+TGG | + | chr4_1:34493154-34493173 | None:intergenic | 25.0% |
! | AAACAGAGAAAAATTCTATG+AGG | + | chr4_1:34493161-34493180 | None:intergenic | 25.0% |
!! | AGAATTTTTCTCTGTTTTGT+AGG | - | chr4_1:34493164-34493183 | Msa0545060:intron | 25.0% |
! | AGATAAGAAGAAAAGAAGAA+AGG | - | chr4_1:34493199-34493218 | Msa0545060:intron | 25.0% |
! | AATTCTGCGAAGAAAAAAAA+AGG | + | chr4_1:34493330-34493349 | None:intergenic | 25.0% |
! | TCGCAGAATTACTTTATATT+TGG | - | chr4_1:34493340-34493359 | Msa0545060:intron | 25.0% |
! | TACATTGGAACAATTTACAA+TGG | - | chr4_1:34493457-34493476 | Msa0545060:intron | 25.0% |
! | TCGCTGTATAATAAAATTCA+TGG | + | chr4_1:34494020-34494039 | None:intergenic | 25.0% |
!!! | AAAGTCATTTTTCATACATC+TGG | - | chr4_1:34494124-34494143 | Msa0545060:intron | 25.0% |
!!! | AAGTCATTTTTCATACATCT+GGG | - | chr4_1:34494125-34494144 | Msa0545060:intron | 25.0% |
! | ATCCAAGTTATAGTTGTATA+AGG | - | chr4_1:34494161-34494180 | Msa0545060:intron | 25.0% |
! | AACCTTATACAACTATAACT+TGG | + | chr4_1:34494166-34494185 | None:intergenic | 25.0% |
! | GAGAGTAATTGATAGAAATA+TGG | - | chr4_1:34494518-34494537 | Msa0545060:intron | 25.0% |
!! | TATTTCTCTGTATTTTCTCT+TGG | - | chr4_1:34494936-34494955 | Msa0545060:intron | 25.0% |
! | ATTGCATGGAAATCAAAATA+AGG | + | chr4_1:34495403-34495422 | None:intergenic | 25.0% |
! | TTGACCAAAAAATAATTGCA+TGG | + | chr4_1:34495417-34495436 | None:intergenic | 25.0% |
!!! | AATTATTTTTTGGTCAATGC+AGG | - | chr4_1:34495420-34495439 | Msa0545060:intron | 25.0% |
!!! | TTGCCATATTTTTATATCCT+AGG | - | chr4_1:34495677-34495696 | Msa0545060:CDS | 25.0% |
! | TCATAAACATGTTAATTAGG+GGG | - | chr4_1:34495807-34495826 | Msa0545060:intron | 25.0% |
! | TGCGTAGAATCTTAATTTAA+TGG | + | chr4_1:34496049-34496068 | None:intergenic | 25.0% |
! | ACAAAGTTTAGGAATCATAA+AGG | + | chr4_1:34496420-34496439 | None:intergenic | 25.0% |
! | ATGGTAAATGAACAAAGTTT+AGG | + | chr4_1:34496431-34496450 | None:intergenic | 25.0% |
AAGTTATTACTATCCGAAGA+AGG | - | chr4_1:34492079-34492098 | Msa0545060:three_prime_UTR | 30.0% | |
AAATGGTGAGTTAATGATAG+TGG | - | chr4_1:34492170-34492189 | Msa0545060:three_prime_UTR | 30.0% | |
GAACATTTCCCTATATGAAT+TGG | - | chr4_1:34492468-34492487 | Msa0545060:intron | 30.0% | |
CTGAAACAACCAATTCATAT+AGG | + | chr4_1:34492480-34492499 | None:intergenic | 30.0% | |
AACAAGGACAAAAATCTAGT+TGG | - | chr4_1:34492565-34492584 | Msa0545060:intron | 30.0% | |
! | GTTGATTTAGAAGAGCAAAA+TGG | - | chr4_1:34492613-34492632 | Msa0545060:intron | 30.0% |
! | AAATAAATCGGTTGTTTCAG+TGG | - | chr4_1:34492765-34492784 | Msa0545060:intron | 30.0% |
TCCTGAAATGGAGATTATAA+AGG | - | chr4_1:34492789-34492808 | Msa0545060:intron | 30.0% | |
CCTGAAATGGAGATTATAAA+GGG | - | chr4_1:34492790-34492809 | Msa0545060:intron | 30.0% | |
AACAAGGACAAAAATCTAGT+TGG | - | chr4_1:34492565-34492584 | Msa0545060:intron | 30.0% | |
TCTAAATCAACTTCATCTTC+TGG | + | chr4_1:34492886-34492905 | None:intergenic | 30.0% | |
! | GTTGATTTAGAAGAGCAAAA+TGG | - | chr4_1:34492613-34492632 | Msa0545060:intron | 30.0% |
! | ACATAGTGATTCTAAAGAAG+AGG | - | chr4_1:34493023-34493042 | Msa0545060:CDS | 30.0% |
! | AGAAAGTGCAGTTTATTACA+AGG | + | chr4_1:34493102-34493121 | None:intergenic | 30.0% |
TTGTAATAAACTGCACTTTC+TGG | - | chr4_1:34493101-34493120 | Msa0545060:CDS | 30.0% | |
! | TTTTTCTCTGTTTTGTAGGT+AGG | - | chr4_1:34493168-34493187 | Msa0545060:intron | 30.0% |
!! | AGTTCTAAAATCACCAGAAA+AGG | - | chr4_1:34493223-34493242 | Msa0545060:intron | 30.0% |
GACATTCATATTATTTCCTC+TGG | - | chr4_1:34493266-34493285 | Msa0545060:intron | 30.0% | |
!!! | GGTTAGTTTTACATGTACAT+TGG | - | chr4_1:34493442-34493461 | Msa0545060:intron | 30.0% |
TAAACAATATGGTCACTCTT+AGG | + | chr4_1:34493589-34493608 | None:intergenic | 30.0% | |
AGACTATTTAACTACATACG+AGG | - | chr4_1:34493837-34493856 | Msa0545060:intron | 30.0% | |
AACTACATACGAGGAAAAAT+TGG | - | chr4_1:34493846-34493865 | Msa0545060:intron | 30.0% | |
TCTTAAAGCAAAACAGAAGT+CGG | - | chr4_1:34493894-34493913 | Msa0545060:intron | 30.0% | |
AGGGTTATCTGACTATAATT+AGG | + | chr4_1:34493972-34493991 | None:intergenic | 30.0% | |
CAGCGAAATTAAATTGATGT+TGG | - | chr4_1:34494034-34494053 | Msa0545060:intron | 30.0% | |
!! | TTAAATTTGGTGTTAGGATG+TGG | - | chr4_1:34494273-34494292 | Msa0545060:intron | 30.0% |
TATTAAAATGATATGCACGC+AGG | + | chr4_1:34494388-34494407 | None:intergenic | 30.0% | |
! | AGAAACTCAAAAAGCACATA+AGG | + | chr4_1:34494419-34494438 | None:intergenic | 30.0% |
!!! | ATGTGCTTTTTGAGTTTCTT+TGG | - | chr4_1:34494420-34494439 | Msa0545060:intron | 30.0% |
!! | GGTTTTGATGAGTAAGAATA+AGG | - | chr4_1:34494539-34494558 | Msa0545060:intron | 30.0% |
CATTACTGTTCTGTAATCAA+GGG | + | chr4_1:34494572-34494591 | None:intergenic | 30.0% | |
AACAGTAATGCATAATCATG+AGG | - | chr4_1:34494582-34494601 | Msa0545060:intron | 30.0% | |
ACAGTAATGCATAATCATGA+GGG | - | chr4_1:34494583-34494602 | Msa0545060:intron | 30.0% | |
TGAGAAAGTTAGAAGAAACA+AGG | + | chr4_1:34494633-34494652 | None:intergenic | 30.0% | |
! | GAATGTTTTCAGCAAATAGA+AGG | + | chr4_1:34494738-34494757 | None:intergenic | 30.0% |
ACATTCCACAATGATAGATA+AGG | - | chr4_1:34494752-34494771 | Msa0545060:CDS | 30.0% | |
TGGTAATCATGTATCAAGAT+TGG | + | chr4_1:34494780-34494799 | None:intergenic | 30.0% | |
! | GATTTCTTTAGAGACATCAA+TGG | + | chr4_1:34494912-34494931 | None:intergenic | 30.0% |
GAGTGAATTCATAGATAACT+TGG | - | chr4_1:34495003-34495022 | Msa0545060:intron | 30.0% | |
! | ATCTGTCATTTCAGTTACAA+TGG | + | chr4_1:34495065-34495084 | None:intergenic | 30.0% |
GTGAGATGAGAGATTATAAA+GGG | + | chr4_1:34495297-34495316 | None:intergenic | 30.0% | |
TGTGAGATGAGAGATTATAA+AGG | + | chr4_1:34495298-34495317 | None:intergenic | 30.0% | |
TCATAGCTGTAAATTGAACA+TGG | + | chr4_1:34495363-34495382 | None:intergenic | 30.0% | |
AGCTGATCTAGAGAATAAAT+TGG | - | chr4_1:34495561-34495580 | Msa0545060:intron | 30.0% | |
TAAATTTAAACCAACGACGT+TGG | - | chr4_1:34495765-34495784 | Msa0545060:CDS | 30.0% | |
CATAAACATGTTAATTAGGG+GGG | - | chr4_1:34495808-34495827 | Msa0545060:intron | 30.0% | |
TGCTAGACCTAATAGTATAA+AGG | - | chr4_1:34495952-34495971 | Msa0545060:CDS | 30.0% | |
AGCGAGAAATATCACAAATA+GGG | + | chr4_1:34495987-34496006 | None:intergenic | 30.0% | |
AAGCGAGAAATATCACAAAT+AGG | + | chr4_1:34495988-34496007 | None:intergenic | 30.0% | |
!!! | TGCTGTTTTAAACTAGTACA+TGG | - | chr4_1:34496158-34496177 | Msa0545060:intron | 30.0% |
AGTAGCAGCATCATTTAATA+AGG | + | chr4_1:34496324-34496343 | None:intergenic | 30.0% | |
AACAAGGACAAAAATCTAGC+TGG | - | chr4_1:34492105-34492124 | Msa0545060:three_prime_UTR | 35.0% | |
GTTGTTGTAGAAGAGCAAAA+TGG | - | chr4_1:34492153-34492172 | Msa0545060:three_prime_UTR | 35.0% | |
ATGCCAAACCAATTGCATTA+AGG | - | chr4_1:34492308-34492327 | Msa0545060:CDS | 35.0% | |
ATGCCTTAATGCAATTGGTT+TGG | + | chr4_1:34492314-34492333 | None:intergenic | 35.0% | |
! | TTGGTTGTTTCAGTTGATCA+CGG | - | chr4_1:34492487-34492506 | Msa0545060:intron | 35.0% |
!!! | CTTGTTTTTCTTTTTTCGGC+TGG | + | chr4_1:34492551-34492570 | None:intergenic | 35.0% |
CAGCCGAAAAAAGAAAAACA+AGG | - | chr4_1:34492549-34492568 | Msa0545060:intron | 35.0% | |
CCCTTTATAATCTCCATTTC+AGG | + | chr4_1:34492793-34492812 | None:intergenic | 35.0% | |
GGAGATTATAAAGGGAAGAA+AGG | - | chr4_1:34492798-34492817 | Msa0545060:intron | 35.0% | |
AAGCTACTACTAGTCGAAAA+AGG | - | chr4_1:34492824-34492843 | Msa0545060:intron | 35.0% | |
TAGTCGAAAAAGGAAGAACA+AGG | - | chr4_1:34492834-34492853 | Msa0545060:intron | 35.0% | |
CTGACATCATTGAGGAAAAA+AGG | + | chr4_1:34492990-34493009 | None:intergenic | 35.0% | |
! | TTTTCCTCAATGATGTCAGA+TGG | - | chr4_1:34492991-34493010 | Msa0545060:CDS | 35.0% |
TATTCCATCTGACATCATTG+AGG | + | chr4_1:34492998-34493017 | None:intergenic | 35.0% | |
AATGATGTCAGATGGAATAG+TGG | - | chr4_1:34492999-34493018 | Msa0545060:CDS | 35.0% | |
ATTAGAATCTCTGTGCTTCT+TGG | + | chr4_1:34493061-34493080 | None:intergenic | 35.0% | |
! | TGATTTTGTTCTGCCTTTTC+TGG | + | chr4_1:34493239-34493258 | None:intergenic | 35.0% |
AAAGGCAGAACAAAATCATC+AGG | - | chr4_1:34493241-34493260 | Msa0545060:intron | 35.0% | |
CAGCATAGTTACATATTGTG+AGG | - | chr4_1:34493421-34493440 | Msa0545060:intron | 35.0% | |
ACAAATATGCACAAAGCACA+CGG | + | chr4_1:34493653-34493672 | None:intergenic | 35.0% | |
AATACCATCAAAGTAGACCT+GGG | - | chr4_1:34493788-34493807 | Msa0545060:intron | 35.0% | |
ATACGAGGAAAAATTGGAAG+AGG | - | chr4_1:34493852-34493871 | Msa0545060:intron | 35.0% | |
! | AGTCAGATAACCCTTTTATC+AGG | - | chr4_1:34493978-34493997 | Msa0545060:intron | 35.0% |
! | GTCAGATAACCCTTTTATCA+GGG | - | chr4_1:34493979-34493998 | Msa0545060:intron | 35.0% |
! | TCAGATAACCCTTTTATCAG+GGG | - | chr4_1:34493980-34493999 | Msa0545060:intron | 35.0% |
TATTATCCCCCCTGATAAAA+GGG | + | chr4_1:34493991-34494010 | None:intergenic | 35.0% | |
TTATTATCCCCCCTGATAAA+AGG | + | chr4_1:34493992-34494011 | None:intergenic | 35.0% | |
!! | TTGTATACCGACTAGTTCTA+TGG | - | chr4_1:34494082-34494101 | Msa0545060:intron | 35.0% |
! | TGACAGAGCTTTTCTGTTTA+TGG | - | chr4_1:34494233-34494252 | Msa0545060:intron | 35.0% |
! | GACAGAGCTTTTCTGTTTAT+GGG | - | chr4_1:34494234-34494253 | Msa0545060:intron | 35.0% |
! | ACAGAGCTTTTCTGTTTATG+GGG | - | chr4_1:34494235-34494254 | Msa0545060:intron | 35.0% |
! | TGGTAGTTGGTGCTTAAATT+TGG | - | chr4_1:34494260-34494279 | Msa0545060:intron | 35.0% |
!! | TGGTGCTTAAATTTGGTGTT+AGG | - | chr4_1:34494267-34494286 | Msa0545060:intron | 35.0% |
!!! | TTTTTGAGTTTCTTTGGCCT+AGG | - | chr4_1:34494426-34494445 | Msa0545060:intron | 35.0% |
GCATTACTGTTCTGTAATCA+AGG | + | chr4_1:34494573-34494592 | None:intergenic | 35.0% | |
TAGAAGAAACAAGGCATGTT+GGG | + | chr4_1:34494624-34494643 | None:intergenic | 35.0% | |
TTAGAAGAAACAAGGCATGT+TGG | + | chr4_1:34494625-34494644 | None:intergenic | 35.0% | |
AAATAGAAGGAGAACGTTTC+GGG | + | chr4_1:34494725-34494744 | None:intergenic | 35.0% | |
CAAATAGAAGGAGAACGTTT+CGG | + | chr4_1:34494726-34494745 | None:intergenic | 35.0% | |
TGGAACCTTATCTATCATTG+TGG | + | chr4_1:34494760-34494779 | None:intergenic | 35.0% | |
ATACAGATGAGAGCCAATAA+TGG | - | chr4_1:34494802-34494821 | Msa0545060:intron | 35.0% | |
!! | TTTTGACTCGTGAACATTGA+AGG | + | chr4_1:34494848-34494867 | None:intergenic | 35.0% |
CATTTCAGTTACAATGGTCA+AGG | + | chr4_1:34495059-34495078 | None:intergenic | 35.0% | |
!! | GAAAGGTGTTAGAACTTTGA+GGG | + | chr4_1:34495186-34495205 | None:intergenic | 35.0% |
!! | AGAAAGGTGTTAGAACTTTG+AGG | + | chr4_1:34495187-34495206 | None:intergenic | 35.0% |
ACCTTTCTCTTCCTTAAGTT+GGG | - | chr4_1:34495199-34495218 | Msa0545060:intron | 35.0% | |
GAAATGACAAACCCAACTTA+AGG | + | chr4_1:34495213-34495232 | None:intergenic | 35.0% | |
! | ATGGCAAAGTGAGTTAGTTT+GGG | + | chr4_1:34495322-34495341 | None:intergenic | 35.0% |
TATGGCAAAGTGAGTTAGTT+TGG | + | chr4_1:34495323-34495342 | None:intergenic | 35.0% | |
!!! | GAGCTTCTCTTTTTTGAAAG+CGG | + | chr4_1:34495624-34495643 | None:intergenic | 35.0% |
AAAAGAGAAGCTCAGAGAAA+TGG | - | chr4_1:34495631-34495650 | Msa0545060:intron | 35.0% | |
GAAACAGCTAGAAATTACCT+AGG | + | chr4_1:34495697-34495716 | None:intergenic | 35.0% | |
!! | GACGTTGGTGGTTTAAATAA+AGG | - | chr4_1:34495780-34495799 | Msa0545060:CDS | 35.0% |
CATGTTGGTGCAAATATAGA+TGG | + | chr4_1:34495843-34495862 | None:intergenic | 35.0% | |
CATCTATATTTGCACCAACA+TGG | - | chr4_1:34495841-34495860 | Msa0545060:intron | 35.0% | |
ACACTAGCAGATAATGTTTC+TGG | - | chr4_1:34496074-34496093 | Msa0545060:intron | 35.0% | |
AAGAAAAGAACCATGAACCT+TGG | + | chr4_1:34496354-34496373 | None:intergenic | 35.0% | |
! | AGGTTCATGGTTCTTTTCTT+AGG | - | chr4_1:34496354-34496373 | Msa0545060:intron | 35.0% |
! | GGTTCATGGTTCTTTTCTTA+GGG | - | chr4_1:34496355-34496374 | Msa0545060:intron | 35.0% |
! | GTTCATGGTTCTTTTCTTAG+GGG | - | chr4_1:34496356-34496375 | Msa0545060:intron | 35.0% |
!! | AGGGGAGCAGATTTTATTTA+TGG | - | chr4_1:34496374-34496393 | Msa0545060:intron | 35.0% |
TATCCGAAGAAGGAAGAACA+AGG | - | chr4_1:34492089-34492108 | Msa0545060:three_prime_UTR | 40.0% | |
TGTCCTTGTTCTTCCTTCTT+CGG | + | chr4_1:34492095-34492114 | None:intergenic | 40.0% | |
!! | GTGAGTTAATGATAGTGGTG+TGG | - | chr4_1:34492175-34492194 | Msa0545060:three_prime_UTR | 40.0% |
! | ACCAATTGCATTAAGGCATC+CGG | - | chr4_1:34492315-34492334 | Msa0545060:CDS | 40.0% |
ATCACAGAACTCACAAAAGC+CGG | + | chr4_1:34492337-34492356 | None:intergenic | 40.0% | |
! | TGGTTGTTTCAGTTGATCAC+GGG | - | chr4_1:34492488-34492507 | Msa0545060:intron | 40.0% |
!! | AAATGGTGAGTTGATGACAG+TGG | - | chr4_1:34492630-34492649 | Msa0545060:intron | 40.0% |
TGTTTCAGTGGATCCTGAAA+TGG | - | chr4_1:34492777-34492796 | Msa0545060:intron | 40.0% | |
! | AGAGCAAAATGGTGAGTTGA+TGG | - | chr4_1:34492624-34492643 | Msa0545060:intron | 40.0% |
!! | GTGAGTTGATGGTTATGATG+TGG | - | chr4_1:34492917-34492936 | Msa0545060:intron | 40.0% |
GGTGTTTCACAATACGACAA+TGG | + | chr4_1:34493133-34493152 | None:intergenic | 40.0% | |
GTCAACGGTCGAAAGAATAA+TGG | + | chr4_1:34493612-34493631 | None:intergenic | 40.0% | |
! | TTCTTTCGACCGTTGACTAT+TGG | - | chr4_1:34493615-34493634 | Msa0545060:intron | 40.0% |
CACCACAATCCAATAGTCAA+CGG | + | chr4_1:34493627-34493646 | None:intergenic | 40.0% | |
GAATACCATCAAAGTAGACC+TGG | - | chr4_1:34493787-34493806 | Msa0545060:intron | 40.0% | |
! | CAGATAACCCTTTTATCAGG+GGG | - | chr4_1:34493981-34494000 | Msa0545060:intron | 40.0% |
! | AGATAACCCTTTTATCAGGG+GGG | - | chr4_1:34493982-34494001 | Msa0545060:intron | 40.0% |
TTCAAGGCCATAGAACTAGT+CGG | + | chr4_1:34494092-34494111 | None:intergenic | 40.0% | |
! | GCTTTTCTGTTTATGGGGTA+TGG | - | chr4_1:34494240-34494259 | Msa0545060:intron | 40.0% |
TGTTTATGGGGTATGGTAGT+TGG | - | chr4_1:34494247-34494266 | Msa0545060:intron | 40.0% | |
!! | AATTTGGTGTTAGGATGTGG+AGG | - | chr4_1:34494276-34494295 | Msa0545060:intron | 40.0% |
TTGGTATCCATCAGAACTGT+TGG | + | chr4_1:34494692-34494711 | None:intergenic | 40.0% | |
! | ATTGGCTCTCATCTGTATCT+TGG | + | chr4_1:34494800-34494819 | None:intergenic | 40.0% |
TCGTGAACATTGAAGGTCTT+TGG | + | chr4_1:34494841-34494860 | None:intergenic | 40.0% | |
CAAAACGACAGATAGCTGAA+TGG | - | chr4_1:34494863-34494882 | Msa0545060:intron | 40.0% | |
CTGAAATGACAGATCCAAAG+TGG | - | chr4_1:34495071-34495090 | Msa0545060:intron | 40.0% | |
AGGAGGAATAGGTCTCTATT+GGG | + | chr4_1:34495136-34495155 | None:intergenic | 40.0% | |
AAGGAGGAATAGGTCTCTAT+TGG | + | chr4_1:34495137-34495156 | None:intergenic | 40.0% | |
GTATGAGAAGTGAAGCTTGA+AGG | + | chr4_1:34495156-34495175 | None:intergenic | 40.0% | |
CACCTTTCTCTTCCTTAAGT+TGG | - | chr4_1:34495198-34495217 | Msa0545060:intron | 40.0% | |
ACCCAACTTAAGGAAGAGAA+AGG | + | chr4_1:34495203-34495222 | None:intergenic | 40.0% | |
!! | ATTATAAAGGGCGTTGTCGT+GGG | + | chr4_1:34495285-34495304 | None:intergenic | 40.0% |
! | TGGCAAAGTGAGTTAGTTTG+GGG | + | chr4_1:34495321-34495340 | None:intergenic | 40.0% |
GAACGTTAAACACTGGAGTA+TGG | + | chr4_1:34495341-34495360 | None:intergenic | 40.0% | |
GAACATGGAACGTTAAACAC+TGG | + | chr4_1:34495348-34495367 | None:intergenic | 40.0% | |
! | TAGTTTTCTTCCTACCCTTG+TGG | + | chr4_1:34495501-34495520 | None:intergenic | 40.0% |
!! | AAAACTACCGACTCTGAAAG+TGG | - | chr4_1:34495514-34495533 | Msa0545060:CDS | 40.0% |
!! | AAACTACCGACTCTGAAAGT+GGG | - | chr4_1:34495515-34495534 | Msa0545060:CDS | 40.0% |
ATTTAAACCAACGACGTTGG+TGG | - | chr4_1:34495768-34495787 | Msa0545060:CDS | 40.0% | |
ATTTAAACCACCAACGTCGT+TGG | + | chr4_1:34495778-34495797 | None:intergenic | 40.0% | |
AAACATGTTAATTAGGGGGG+TGG | - | chr4_1:34495811-34495830 | Msa0545060:intron | 40.0% | |
CTAAAAGATCTGCTCCATGT+TGG | + | chr4_1:34495858-34495877 | None:intergenic | 40.0% | |
GAATGAGCGTCACATAAAAG+CGG | + | chr4_1:34496127-34496146 | None:intergenic | 40.0% | |
CTCTGCAAGCAAAACATGAA+TGG | + | chr4_1:34496226-34496245 | None:intergenic | 40.0% | |
! | TGTTTTGCTTGCAGAGCTAA+TGG | - | chr4_1:34496230-34496249 | Msa0545060:intron | 40.0% |
GGAATTGCAGAGCAAATTTG+AGG | - | chr4_1:34496251-34496270 | Msa0545060:intron | 40.0% | |
GCAGCTTGTAAAGGGGAAAA+AGG | - | chr4_1:34492053-34492072 | Msa0545060:three_prime_UTR | 45.0% | |
ACATCGTGTGTATGGCTATG+CGG | + | chr4_1:34492278-34492297 | None:intergenic | 45.0% | |
TAGCCATACACACGATGTGT+CGG | - | chr4_1:34492280-34492299 | Msa0545060:CDS | 45.0% | |
TGATCACGGGATGCAAGTTA+CGG | - | chr4_1:34492501-34492520 | Msa0545060:intron | 45.0% | |
GCAAGTTACGGAGGGAAAAA+AGG | - | chr4_1:34492513-34492532 | Msa0545060:intron | 45.0% | |
AGTAGGGTGGATGTTGGAAA+AGG | + | chr4_1:34493565-34493584 | None:intergenic | 45.0% | |
ATGGTCACTCTTAGGCAGTA+GGG | + | chr4_1:34493581-34493600 | None:intergenic | 45.0% | |
TATGGTCACTCTTAGGCAGT+AGG | + | chr4_1:34493582-34493601 | None:intergenic | 45.0% | |
! | GACCGTTGACTATTGGATTG+TGG | - | chr4_1:34493622-34493641 | Msa0545060:intron | 45.0% |
GGAATACTCAAACTGCAGAG+TGG | - | chr4_1:34493758-34493777 | Msa0545060:intron | 45.0% | |
TCAAACTGCAGAGTGGATCA+TGG | - | chr4_1:34493765-34493784 | Msa0545060:intron | 45.0% | |
AAGTCACTTCTATGCTGCCT+AGG | + | chr4_1:34494446-34494465 | None:intergenic | 45.0% | |
GAAACAAGGCATGTTGGGTA+AGG | + | chr4_1:34494619-34494638 | None:intergenic | 45.0% | |
ATCCATCAGAACTGTTGGTC+AGG | + | chr4_1:34494687-34494706 | None:intergenic | 45.0% | |
CGTTTCGGGAGACTATTGAT+TGG | + | chr4_1:34494711-34494730 | None:intergenic | 45.0% | |
TACAATGGTCAAGGTTCTCG+TGG | + | chr4_1:34495050-34495069 | None:intergenic | 45.0% | |
GGCTCATTAGGTAACCACTT+TGG | + | chr4_1:34495088-34495107 | None:intergenic | 45.0% | |
AGTGGTTACCTAATGAGCCA+CGG | - | chr4_1:34495089-34495108 | Msa0545060:intron | 45.0% | |
TGTTTGTTCCGTGGCTCATT+AGG | + | chr4_1:34495100-34495119 | None:intergenic | 45.0% | |
AGCCACGGAACAAACATCAA+GGG | - | chr4_1:34495104-34495123 | Msa0545060:intron | 45.0% | |
TTCCCTTGATGTTTGTTCCG+TGG | + | chr4_1:34495109-34495128 | None:intergenic | 45.0% | |
GTGAAGCTTGAAGGAGGAAT+AGG | + | chr4_1:34495147-34495166 | None:intergenic | 45.0% | |
TGAGAAGTGAAGCTTGAAGG+AGG | + | chr4_1:34495153-34495172 | None:intergenic | 45.0% | |
ATATTCTTCAGCACCCTAGC+AGG | - | chr4_1:34495240-34495259 | Msa0545060:intron | 45.0% | |
!! | GATTATAAAGGGCGTTGTCG+TGG | + | chr4_1:34495286-34495305 | None:intergenic | 45.0% |
AGCAATCCCACTTTCAGAGT+CGG | + | chr4_1:34495524-34495543 | None:intergenic | 45.0% | |
TCTGAAAGTGGGATTGCTGT+GGG | - | chr4_1:34495526-34495545 | Msa0545060:CDS | 45.0% | |
ACTATAGCAGCCAAGGTTCA+TGG | - | chr4_1:34496341-34496360 | Msa0545060:intron | 45.0% | |
GTCGGAAACCACCAAGTAGT+CGG | - | chr4_1:34492251-34492270 | Msa0545060:exon | 50.0% | |
CATCGTGTGTATGGCTATGC+GGG | + | chr4_1:34492277-34492296 | None:intergenic | 50.0% | |
CAACCGACACATCGTGTGTA+TGG | + | chr4_1:34492286-34492305 | None:intergenic | 50.0% | |
GCCGGATGCCTTAATGCAAT+TGG | + | chr4_1:34492319-34492338 | None:intergenic | 50.0% | |
TGAGCAGTCATCATCTCCAG+AGG | + | chr4_1:34493285-34493304 | None:intergenic | 50.0% | |
GGAGATGATGACTGCTCACA+TGG | - | chr4_1:34493287-34493306 | Msa0545060:intron | 50.0% | |
TTAGGCAGTAGGGTGGATGT+TGG | + | chr4_1:34493571-34493590 | None:intergenic | 50.0% | |
CCAACCCAGGTCTACTTTGA+TGG | + | chr4_1:34493795-34493814 | None:intergenic | 50.0% | |
CCATCAAAGTAGACCTGGGT+TGG | - | chr4_1:34493792-34493811 | Msa0545060:intron | 50.0% | |
! | TCAAAGTAGACCTGGGTTGG+AGG | - | chr4_1:34493795-34493814 | Msa0545060:intron | 50.0% |
! | TTTTGCAACACCTCCAACCC+AGG | + | chr4_1:34493808-34493827 | None:intergenic | 50.0% |
CACGCAGGATACTGAGTCAA+TGG | + | chr4_1:34494373-34494392 | None:intergenic | 50.0% | |
ACAAGGCATGTTGGGTAAGG+AGG | + | chr4_1:34494616-34494635 | None:intergenic | 50.0% | |
! | GTCCTGACCAACAGTTCTGA+TGG | - | chr4_1:34494682-34494701 | Msa0545060:intron | 50.0% |
TGAGAGCCAATAATGGCCTC+TGG | - | chr4_1:34494809-34494828 | Msa0545060:intron | 50.0% | |
AGCCAATAATGGCCTCTGGT+GGG | - | chr4_1:34494813-34494832 | Msa0545060:intron | 50.0% | |
AACCCACCAGAGGCCATTAT+TGG | + | chr4_1:34494818-34494837 | None:intergenic | 50.0% | |
GAGCCACGGAACAAACATCA+AGG | - | chr4_1:34495103-34495122 | Msa0545060:intron | 50.0% | |
AAAGAAGCCCTTGCTGCAGA+AGG | - | chr4_1:34495454-34495473 | Msa0545060:intron | 50.0% | |
AAGAAGCCCTTGCTGCAGAA+GGG | - | chr4_1:34495455-34495474 | Msa0545060:intron | 50.0% | |
ACGGTGGTTCAACACCACAA+GGG | - | chr4_1:34495484-34495503 | Msa0545060:CDS | 50.0% | |
TGGTTCAACACCACAAGGGT+AGG | - | chr4_1:34495488-34495507 | Msa0545060:CDS | 50.0% | |
! | CTCTGAAAGTGGGATTGCTG+TGG | - | chr4_1:34495525-34495544 | Msa0545060:CDS | 50.0% |
CATGTTAATTAGGGGGGTGG+CGG | - | chr4_1:34495814-34495833 | Msa0545060:intron | 50.0% | |
ATGTTAATTAGGGGGGTGGC+GGG | - | chr4_1:34495815-34495834 | Msa0545060:intron | 50.0% | |
TGCTGCTACTATAGCAGCCA+AGG | - | chr4_1:34496334-34496353 | Msa0545060:intron | 50.0% | |
TCACGGGATGCAAGTTACGG+AGG | - | chr4_1:34492504-34492523 | Msa0545060:intron | 55.0% | |
CACGGGATGCAAGTTACGGA+GGG | - | chr4_1:34492505-34492524 | Msa0545060:intron | 55.0% | |
!! | GTGAGTTGATGACAGTGGCG+TGG | - | chr4_1:34492635-34492654 | Msa0545060:intron | 55.0% |
GTCACTCTTAGGCAGTAGGG+TGG | + | chr4_1:34493578-34493597 | None:intergenic | 55.0% | |
AGAACTGTTGGTCAGGACGC+AGG | + | chr4_1:34494680-34494699 | None:intergenic | 55.0% | |
GAGCCAATAATGGCCTCTGG+TGG | - | chr4_1:34494812-34494831 | Msa0545060:intron | 55.0% | |
!! | AGGTCTTTGGAACCCACCAG+AGG | + | chr4_1:34494828-34494847 | None:intergenic | 55.0% |
GGCCATTGCTGCAGCAACAA+TGG | - | chr4_1:34494957-34494976 | Msa0545060:intron | 55.0% | |
CGCCATTGTTGCTGCAGCAA+TGG | + | chr4_1:34494962-34494981 | None:intergenic | 55.0% | |
GGCGCACATGTTTCAGCAAG+TGG | - | chr4_1:34494978-34494997 | Msa0545060:intron | 55.0% | |
CTAGGCCTTTCGTCCTGCTA+GGG | + | chr4_1:34495256-34495275 | None:intergenic | 55.0% | |
ACTAGGCCTTTCGTCCTGCT+AGG | + | chr4_1:34495257-34495276 | None:intergenic | 55.0% | |
!! | CGTTGTCGTGGGAGAGTACT+AGG | + | chr4_1:34495274-34495293 | None:intergenic | 55.0% |
AGAAGCCCTTGCTGCAGAAG+GGG | - | chr4_1:34495456-34495475 | Msa0545060:intron | 55.0% | |
GACGGTGGTTCAACACCACA+AGG | - | chr4_1:34495483-34495502 | Msa0545060:CDS | 55.0% | |
AAGTGGGATTGCTGTGGGCT+CGG | - | chr4_1:34495531-34495550 | Msa0545060:CDS | 55.0% | |
TGCAGCAGTTGAGAGCTGCT+AGG | - | chr4_1:34496289-34496308 | Msa0545060:intron | 55.0% | |
TATGCGGGCCGACTACTTGG+TGG | + | chr4_1:34492262-34492281 | None:intergenic | 60.0% | |
CAGCACCCTAGCAGGACGAA+AGG | - | chr4_1:34495248-34495267 | Msa0545060:intron | 60.0% | |
GAAGCCCTTGCTGCAGAAGG+GGG | - | chr4_1:34495457-34495476 | Msa0545060:intron | 60.0% | |
CCATCCCCCTTCTGCAGCAA+GGG | + | chr4_1:34495464-34495483 | None:intergenic | 60.0% | |
TCCATCCCCCTTCTGCAGCA+AGG | + | chr4_1:34495465-34495484 | None:intergenic | 60.0% | |
TGCTGCAGAAGGGGGATGGA+CGG | - | chr4_1:34495465-34495484 | Msa0545060:intron | 60.0% | |
GGCTATGCGGGCCGACTACT+TGG | + | chr4_1:34492265-34492284 | None:intergenic | 65.0% | |
CCCTTGCTGCAGAAGGGGGA+TGG | - | chr4_1:34495461-34495480 | Msa0545060:intron | 65.0% | |
TGCAGAAGGGGGATGGACGG+TGG | - | chr4_1:34495468-34495487 | Msa0545060:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 34492051 | 34496534 | 34492051 | ID=Msa0545060;Name=Msa0545060 |
chr4_1 | mRNA | 34492051 | 34496534 | 34492051 | ID=Msa0545060-mRNA-1;Parent=Msa0545060;Name=Msa0545060-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|1|0.87|1|1|1|8|205|336 |
chr4_1 | exon | 34492051 | 34492341 | 34492051 | ID=Msa0545060-mRNA-1:exon:8781;Parent=Msa0545060-mRNA-1 |
chr4_1 | exon | 34492933 | 34493143 | 34492933 | ID=Msa0545060-mRNA-1:exon:8780;Parent=Msa0545060-mRNA-1 |
chr4_1 | exon | 34494712 | 34494809 | 34494712 | ID=Msa0545060-mRNA-1:exon:8779;Parent=Msa0545060-mRNA-1 |
chr4_1 | exon | 34495268 | 34495399 | 34495268 | ID=Msa0545060-mRNA-1:exon:8778;Parent=Msa0545060-mRNA-1 |
chr4_1 | exon | 34495483 | 34495575 | 34495483 | ID=Msa0545060-mRNA-1:exon:8777;Parent=Msa0545060-mRNA-1 |
chr4_1 | exon | 34495669 | 34495800 | 34495669 | ID=Msa0545060-mRNA-1:exon:8776;Parent=Msa0545060-mRNA-1 |
chr4_1 | exon | 34495951 | 34496085 | 34495951 | ID=Msa0545060-mRNA-1:exon:8775;Parent=Msa0545060-mRNA-1 |
chr4_1 | exon | 34496411 | 34496534 | 34496411 | ID=Msa0545060-mRNA-1:exon:8774;Parent=Msa0545060-mRNA-1 |
chr4_1 | CDS | 34496411 | 34496534 | 34496411 | ID=Msa0545060-mRNA-1:cds;Parent=Msa0545060-mRNA-1 |
chr4_1 | CDS | 34495951 | 34496085 | 34495951 | ID=Msa0545060-mRNA-1:cds;Parent=Msa0545060-mRNA-1 |
chr4_1 | CDS | 34495669 | 34495800 | 34495669 | ID=Msa0545060-mRNA-1:cds;Parent=Msa0545060-mRNA-1 |
chr4_1 | CDS | 34495483 | 34495575 | 34495483 | ID=Msa0545060-mRNA-1:cds;Parent=Msa0545060-mRNA-1 |
chr4_1 | CDS | 34495268 | 34495399 | 34495268 | ID=Msa0545060-mRNA-1:cds;Parent=Msa0545060-mRNA-1 |
chr4_1 | CDS | 34494712 | 34494809 | 34494712 | ID=Msa0545060-mRNA-1:cds;Parent=Msa0545060-mRNA-1 |
chr4_1 | CDS | 34492933 | 34493143 | 34492933 | ID=Msa0545060-mRNA-1:cds;Parent=Msa0545060-mRNA-1 |
chr4_1 | CDS | 34492256 | 34492341 | 34492256 | ID=Msa0545060-mRNA-1:cds;Parent=Msa0545060-mRNA-1 |
chr4_1 | three_prime_UTR | 34492051 | 34492255 | 34492051 | ID=Msa0545060-mRNA-1:three_prime_utr;Parent=Msa0545060-mRNA-1 |
Gene Sequence |
Protein sequence |