AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1165740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1165740 MtrunA17_Chr7g0269391 90.389 926 53 3 1 926 1 890 0.0 1536
Msa1165740 MtrunA17_Chr3g0142371 77.344 512 89 9 1 491 1 506 0.0 681
Msa1165740 MtrunA17_Chr3g0142361 80.720 389 35 3 518 906 1 349 0.0 607
Msa1165740 MtrunA17_Chr7g0257671 51.453 585 209 20 1 578 1 517 1.69e-135 421
Msa1165740 MtrunA17_Chr7g0257671 68.889 180 51 2 691 870 493 667 3.42e-73 254
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1165740 AT4G02400.1 46.320 924 405 19 19 924 5 855 0.0 681
Msa1165740 AT5G08600.1 43.856 887 394 19 19 890 8 805 0.0 597
Msa1165740 AT5G08600.2 43.013 916 405 20 23 910 12 838 0.0 591
Msa1165740 AT5G08600.3 38.394 685 321 19 19 691 6 601 2.03e-107 345

Find 204 sgRNAs with CRISPR-Local

Find 425 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCCTATTTCTCTGAATA+AGG 0.222756 7_4:-57706229 None:intergenic
ATGAAAGTTCCCAGAGAAAA+AGG 0.230480 7_4:+57709269 Msa1165740:CDS
CCATGTATCTGAGGCAAATA+TGG 0.232475 7_4:-57708677 None:intergenic
CCTCTGGCGTTCTTGTTTCA+TGG 0.236132 7_4:-57707408 None:intergenic
TTCTTTCTAGATTCTTCTTC+AGG 0.247261 7_4:-57705486 None:intergenic
ACAGCTAAAGCATAACAAAT+TGG 0.249672 7_4:-57711202 None:intergenic
TCCAAAGAATACACTGAAAA+TGG 0.251438 7_4:-57711013 None:intergenic
AGAAGTCTTCAAAGTTTAAT+AGG 0.252682 7_4:+57708852 Msa1165740:CDS
ATTCCTCTCAAATTTAGTTC+TGG 0.253669 7_4:-57706327 None:intergenic
ACCAGTGGCAGAAGAGTATT+TGG 0.256001 7_4:+57708298 Msa1165740:CDS
ACATTAATGTTTCATTGTTT+TGG 0.263935 7_4:+57711325 Msa1165740:three_prime_UTR
TATTATCAGCACCAATTGTT+TGG 0.264258 7_4:-57708333 None:intergenic
AACAATTGGTGCTGATAATA+AGG 0.264486 7_4:+57708336 Msa1165740:CDS
ATTGACTCTGATGATGATTC+TGG 0.264836 7_4:+57705707 Msa1165740:CDS
GAATAAATAATTACCATAAA+AGG 0.270343 7_4:-57707835 None:intergenic
AACCCCTTATTCAGAGAAAT+AGG 0.271086 7_4:+57706225 Msa1165740:CDS
CCACTGGTAGATGCTACTTT+TGG 0.288858 7_4:-57708283 None:intergenic
CAATTTGTTGATTTCTTAAC+CGG 0.305399 7_4:-57706097 None:intergenic
GCCTCTATTACTTCCTGGTT+GGG 0.307969 7_4:+57709189 Msa1165740:CDS
TACTTCCTGGTTGGGGTCAA+TGG 0.313460 7_4:+57709197 Msa1165740:CDS
TCTGAGAAGTCCAAGAAAAT+AGG 0.319842 7_4:-57708537 None:intergenic
TTTGATGAAAAGACAGATCT+AGG 0.330885 7_4:+57706266 Msa1165740:CDS
TGCCTCAGATACATGGAAAA+AGG 0.332114 7_4:+57708684 Msa1165740:CDS
GGCTTTGCTATCATTGCCTT+TGG 0.332623 7_4:-57710908 None:intergenic
ACCTTTACATCGTGCCTAAC+AGG 0.337743 7_4:-57708875 None:intergenic
TTCCTCTCAAATTTAGTTCT+GGG 0.338005 7_4:-57706326 None:intergenic
GCATATTCATTAGCAGCTTC+AGG 0.339373 7_4:-57707386 None:intergenic
AGTTCATCATGACAAAATTA+TGG 0.340220 7_4:+57706361 Msa1165740:CDS
TCCCTCGTTCTATTATCTCT+TGG 0.340319 7_4:-57711101 None:intergenic
CTCCCTATTTCTCTGAATAA+GGG 0.343945 7_4:-57706228 None:intergenic
TAACAGACGATGATATGTTT+TGG 0.345941 7_4:-57707318 None:intergenic
AACTAGAATCATCAGGTCTT+TGG 0.348602 7_4:+57705180 Msa1165740:five_prime_UTR
GAGAAGCCTCTATTACTTCC+TGG 0.348985 7_4:+57709184 Msa1165740:CDS
AAGACATCTTTGGAAGTATA+AGG 0.349436 7_4:-57710428 None:intergenic
CAAAGTTTAATAGGCCTGTT+AGG 0.350326 7_4:+57708861 Msa1165740:CDS
TTGTTATGCTTTAGCTGTTA+AGG 0.351362 7_4:+57711207 Msa1165740:three_prime_UTR
ACGAGGAACTGACTAGAAAA+AGG 0.357806 7_4:+57707638 Msa1165740:CDS
TCTAACCCGGCAACTACATT+TGG 0.361095 7_4:+57710485 Msa1165740:CDS
AAAATCTTGTTTGCCTTATC+CGG 0.361359 7_4:-57707736 None:intergenic
GTAGTTGCCGGGTTAGATTC+AGG 0.370277 7_4:-57710479 None:intergenic
ATTATCAGCACCAATTGTTT+GGG 0.370353 7_4:-57708332 None:intergenic
GATCGTCACGAAGAGGATTA+AGG 0.372975 7_4:-57706058 None:intergenic
ATGGTGAATATTTATAGAAC+TGG 0.385024 7_4:-57710994 None:intergenic
AGAATCCTCCAGCTTCTTCA+TGG 0.403400 7_4:-57708245 None:intergenic
ACCTTCGCTTGATCTGCCTT+TGG 0.407519 7_4:-57706152 None:intergenic
AGCATCCTTTCTCTTCTTGA+GGG 0.407735 7_4:-57709299 None:intergenic
CTTCATATTCTTGTACAGTA+AGG 0.410508 7_4:-57708219 None:intergenic
TATAAAACCGATAGAATTTG+AGG 0.410968 7_4:+57710819 Msa1165740:CDS
AACTAAATTTGAGAGGAATA+TGG 0.412942 7_4:+57706331 Msa1165740:CDS
CCATATTTGCCTCAGATACA+TGG 0.414348 7_4:+57708677 Msa1165740:CDS
GACAATCAACGGAAGAAAAC+CGG 0.418141 7_4:+57705357 Msa1165740:CDS
GAGGAAGAATGATGTTATTC+CGG 0.419305 7_4:+57705959 Msa1165740:CDS
TGCTTGATAGGTTTCTATAA+AGG 0.420322 7_4:+57707205 Msa1165740:intron
ACACTCTGTTGCCGCTGCTC+TGG 0.420778 7_4:-57710862 None:intergenic
AGAGGTCCAAATGTAGTTGC+CGG 0.421778 7_4:-57710491 None:intergenic
CATCTCAAGAGGAGCTCATT+CGG 0.423337 7_4:+57709080 Msa1165740:CDS
GAGCATCCTTTCTCTTCTTG+AGG 0.426017 7_4:-57709300 None:intergenic
AAGCTTCCGCCTACCAAAAT+CGG 0.432729 7_4:-57711071 None:intergenic
TGACCTTTCTTCTGATTTCG+AGG 0.434404 7_4:+57705545 Msa1165740:CDS
TTATTATCATTGACAGAGAC+AGG 0.436439 7_4:-57705522 None:intergenic
TATTTATTCTTACCATCAAA+AGG 0.437025 7_4:-57705791 None:intergenic
CAGCTAAAGCATAACAAATT+GGG 0.439891 7_4:-57711201 None:intergenic
TCGATTTCATCAACATCAAC+AGG 0.444833 7_4:-57705432 None:intergenic
GTTAAAGAAAGTTAGATTGA+AGG 0.445755 7_4:+57707337 Msa1165740:CDS
CTACATTTGGACCTCTTACT+CGG 0.449943 7_4:+57710498 Msa1165740:CDS
AGGATGTTACAACGAATTAC+CGG 0.452496 7_4:+57705755 Msa1165740:CDS
GCTTGATCTGCCTTTGGAAG+TGG 0.453063 7_4:-57706146 None:intergenic
GTTGAAGCAGAGAATGTGTT+GGG 0.453366 7_4:-57705244 None:intergenic
AGCCTCTATTACTTCCTGGT+TGG 0.459722 7_4:+57709188 Msa1165740:CDS
ACTCTGATGAAAGACATCTT+TGG 0.462745 7_4:-57710438 None:intergenic
TTTATGCATTTCTTGAAACT+TGG 0.463818 7_4:+57708596 Msa1165740:CDS
ATGGCTAAAGCCCAAACAAT+TGG 0.467988 7_4:+57708322 Msa1165740:CDS
TGCTGATTCTGATCCGGATA+AGG 0.468993 7_4:+57707723 Msa1165740:CDS
ATCACTGCTGCTACTGTCCA+TGG 0.477773 7_4:-57707665 None:intergenic
TTGACTCTGATGATGATTCT+GGG 0.479242 7_4:+57705708 Msa1165740:CDS
GGAAGTAATAGAGGCTTCTC+AGG 0.479287 7_4:-57709181 None:intergenic
AGAGTCTTCTCAGTTGGAAA+TGG 0.480279 7_4:+57707361 Msa1165740:CDS
TGAAGATTCCATGAAGAAGC+TGG 0.480768 7_4:+57708237 Msa1165740:CDS
CGCTGCTCTGGTTTATCGTG+AGG 0.482465 7_4:-57710850 None:intergenic
TAAAGATAGCAATCCCGACT+TGG 0.484286 7_4:-57707812 None:intergenic
CCCCAACCAGGAAGTAATAG+AGG 0.486131 7_4:-57709190 None:intergenic
ACAAAAGACACTAGAAGTGC+TGG 0.486241 7_4:+57707771 Msa1165740:CDS
ACCCCTTATTCAGAGAAATA+GGG 0.486296 7_4:+57706226 Msa1165740:CDS
CAGGAGTAGGGTTTAAGTGT+TGG 0.488532 7_4:-57705413 None:intergenic
TCATCAACATCAACAGGAGT+AGG 0.489154 7_4:-57705426 None:intergenic
AAAAGAAAGGTTTACCATCC+TGG 0.489615 7_4:+57709233 Msa1165740:CDS
TTCACTTCCTCAAATTCTAT+CGG 0.489667 7_4:-57710826 None:intergenic
GATGATGAAATGCCCAAGTC+GGG 0.491051 7_4:+57707799 Msa1165740:CDS
CTTACTTCAGGCCGAGTAAG+AGG 0.491319 7_4:-57710509 None:intergenic
CAGAGTATGCGTATGCCCAT+TGG 0.493073 7_4:+57710455 Msa1165740:CDS
AACCGGAGTCTTGAATGATC+AGG 0.493279 7_4:-57706080 None:intergenic
TGAGATGGAAGTTCATAAGA+TGG 0.495179 7_4:-57709064 None:intergenic
GCCTGTTAGGCACGATGTAA+AGG 0.499377 7_4:+57708874 Msa1165740:CDS
GGCTCCGCAATTTAGCAGCC+TGG 0.501451 7_4:-57707247 None:intergenic
CGGGTTAGATTCAGGTCCAA+TGG 0.503979 7_4:-57710471 None:intergenic
GCAACGTGGTTTAGATAAGC+AGG 0.506637 7_4:+57707573 Msa1165740:CDS
AATAGAGGCTTCTCAGGCTC+GGG 0.507163 7_4:-57709175 None:intergenic
TTCATGTTCTTTGACCATCC+AGG 0.508099 7_4:-57709251 None:intergenic
TTACCATCAAAAGGCTTGCT+CGG 0.509507 7_4:-57705782 None:intergenic
CCTCTATTACTTCCTGGTTG+GGG 0.511255 7_4:+57709190 Msa1165740:CDS
AAGTGGCAACATTGAGAATG+AGG 0.513026 7_4:+57708417 Msa1165740:CDS
TAATAGAGGCTTCTCAGGCT+CGG 0.513747 7_4:-57709176 None:intergenic
TCCAAATACTCTTCTGCCAC+TGG 0.516839 7_4:-57708299 None:intergenic
AAAAGGCTTGCTCGGCATAC+CGG 0.517139 7_4:-57705774 None:intergenic
CATCAACATCAACAGGAGTA+GGG 0.517223 7_4:-57705425 None:intergenic
TGATAGCGAGGATGACTTTG+AGG 0.518712 7_4:+57708387 Msa1165740:CDS
TGTGATACTTTGAATACTCA+AGG 0.518840 7_4:-57711134 None:intergenic
GAAGGCAGAGTCTTCTCAGT+TGG 0.520406 7_4:+57707355 Msa1165740:CDS
CTAAACCTAGCGGCGTTGCT+AGG 0.522023 7_4:+57705209 Msa1165740:five_prime_UTR
AACAATGAAACATTAATGTA+CGG 0.524074 7_4:-57711321 None:intergenic
TTGATGAAAAGACAGATCTA+GGG 0.527190 7_4:+57706267 Msa1165740:CDS
TCACTAGAACTAGAATCATC+AGG 0.527679 7_4:+57705173 Msa1165740:five_prime_UTR
AGATGAAGGCAAACGAGGAC+CGG 0.528426 7_4:-57705376 None:intergenic
AAGTCGAAGTTGAAGGTCAA+GGG 0.530154 7_4:+57710937 Msa1165740:CDS
TGTGGTATAGAGGCGTGGAT+TGG 0.534234 7_4:+57708162 Msa1165740:intron
CAGATCAAGCGAAGGTGGAA+AGG 0.534540 7_4:+57706159 Msa1165740:CDS
ATACCTCGAAATCAGAAGAA+AGG 0.536953 7_4:-57705548 None:intergenic
TAATCCTAGTCACGATGTTG+TGG 0.538812 7_4:+57706004 Msa1165740:CDS
GAATGCTGCTGATTCTGATC+CGG 0.540001 7_4:+57707717 Msa1165740:CDS
ACATATATACCTCAGCCCTC+TGG 0.540183 7_4:-57707424 None:intergenic
ACTGATATACAGCAAAAGAA+AGG 0.541411 7_4:+57709220 Msa1165740:CDS
GACTTTGAGGCCAAGAAAAG+TGG 0.542359 7_4:+57708400 Msa1165740:CDS
TTCTTTGGAAAGATGCACTT+CGG 0.546093 7_4:+57711027 Msa1165740:three_prime_UTR
TTATGCTTTAGCTGTTAAGG+TGG 0.546687 7_4:+57711210 Msa1165740:three_prime_UTR
TCTTTGGAAGTATAAGGAAA+AGG 0.548729 7_4:-57710422 None:intergenic
TCTATAAAGGATGAGAAGGA+TGG 0.549986 7_4:+57707218 Msa1165740:CDS
GGGTTAGATTCAGGTCCAAT+GGG 0.550457 7_4:-57710470 None:intergenic
AGAAGCCCTCAAGAAGAGAA+AGG 0.556911 7_4:+57709294 Msa1165740:CDS
ATCAGCAGCATTCTCATCAT+CGG 0.557010 7_4:-57707707 None:intergenic
GAGGTCCAAATGTAGTTGCC+GGG 0.559756 7_4:-57710490 None:intergenic
TCCCTATTTCTCTGAATAAG+GGG 0.561919 7_4:-57706227 None:intergenic
AAAGTCGAAGTTGAAGGTCA+AGG 0.563646 7_4:+57710936 Msa1165740:CDS
GAGAAGAAGCGAAATGAAAG+AGG 0.563959 7_4:+57705285 Msa1165740:CDS
CTCTGAGAAATCAAGCAAGA+AGG 0.565144 7_4:+57709342 Msa1165740:CDS
TCAGACTCTAGATATAGCTC+CGG 0.566700 7_4:-57705978 None:intergenic
AACCCAGAACTAAATTTGAG+AGG 0.568491 7_4:+57706324 Msa1165740:CDS
TGAGAAGGATGGGCATAACC+AGG 0.568538 7_4:+57707229 Msa1165740:CDS
ACAAGAACGCCAGAGGGCTG+AGG 0.569776 7_4:+57707415 Msa1165740:CDS
GATGAAGGACAGATGGTGGA+TGG 0.571626 7_4:+57709019 Msa1165740:CDS
AGAAGACTTCCGACAATCAA+CGG 0.578262 7_4:+57705346 Msa1165740:CDS
TCATATCGTAGGCAATAAGA+AGG 0.579455 7_4:+57705935 Msa1165740:intron
CACGATGTTGTGGAAGGTGA+TGG 0.580194 7_4:+57706014 Msa1165740:CDS
GGTTTAGATAAGCAGGATGA+AGG 0.580805 7_4:+57707580 Msa1165740:CDS
CTATAAAGGATGAGAAGGAT+GGG 0.581490 7_4:+57707219 Msa1165740:CDS
AAAGGCAGATCAAGCGAAGG+TGG 0.582891 7_4:+57706154 Msa1165740:CDS
GGTTTCTATAAAGGATGAGA+AGG 0.584067 7_4:+57707214 Msa1165740:intron
TTATGAACTTCCATCTCAAG+AGG 0.584960 7_4:+57709069 Msa1165740:CDS
AAAGATAGCAATCCCGACTT+GGG 0.584979 7_4:-57707811 None:intergenic
TCAAGCGAAGGTGGAAAGGA+AGG 0.585407 7_4:+57706163 Msa1165740:CDS
CGAATGAGCTCCTCTTGAGA+TGG 0.586031 7_4:-57709079 None:intergenic
CAAAGAAACAAGTCACAAAG+TGG 0.588340 7_4:+57706201 Msa1165740:CDS
CCTTCCACAACATCGTGACT+AGG 0.590447 7_4:-57706008 None:intergenic
TACAGATGATGAAGGACAGA+TGG 0.590901 7_4:+57709012 Msa1165740:CDS
CGTTGAAGCAGAGAATGTGT+TGG 0.591483 7_4:-57705245 None:intergenic
GATAGCGATACAGATGATGA+AGG 0.593448 7_4:+57709004 Msa1165740:CDS
CATTGGACCTGAATCTAACC+CGG 0.599340 7_4:+57710472 Msa1165740:CDS
AAGAAGTTGAATAGAACCAA+AGG 0.600324 7_4:+57710892 Msa1165740:CDS
GAAAGGTTTACCATCCTGGA+TGG 0.600524 7_4:+57709237 Msa1165740:CDS
TTCAAAGATGAAGGCAAACG+AGG 0.601593 7_4:-57705381 None:intergenic
GACACAAACATAAAAGTCCA+TGG 0.602299 7_4:+57707536 Msa1165740:CDS
TGTTCATGCACCACTTCCAA+AGG 0.604646 7_4:+57706136 Msa1165740:CDS
ATCCTGATCATTCAAGACTC+CGG 0.607138 7_4:+57706078 Msa1165740:CDS
AGATGATGAAATGCCCAAGT+CGG 0.607430 7_4:+57707798 Msa1165740:CDS
CCTAGTCACGATGTTGTGGA+AGG 0.607641 7_4:+57706008 Msa1165740:CDS
ATAACCAGGCTGCTAAATTG+CGG 0.608153 7_4:+57707243 Msa1165740:CDS
GTGATACTTTGAATACTCAA+GGG 0.614366 7_4:-57711133 None:intergenic
AAGATGATGAGAGACATGAA+AGG 0.617021 7_4:+57705735 Msa1165740:CDS
AAGAAGCTGGAGGATTCTGA+TGG 0.618164 7_4:+57708250 Msa1165740:CDS
GACGCCAACAACCGCCACAT+CGG 0.618823 7_4:+57705309 Msa1165740:CDS
TCTTTGAAAATGTTCAGTCA+CGG 0.619063 7_4:-57707614 None:intergenic
GTGCAGGTGGTGAAGAAACC+AGG 0.621465 7_4:+57710790 Msa1165740:intron
TGTTCTTTGACCATCCAGGA+TGG 0.625183 7_4:-57709247 None:intergenic
TCCAAGAGATAATAGAACGA+GGG 0.626603 7_4:+57711100 Msa1165740:three_prime_UTR
CTCTGATGATGATTCTGGGG+AGG 0.628586 7_4:+57705712 Msa1165740:CDS
GGGAAGTGATCATCTGCAGA+AGG 0.630064 7_4:+57708438 Msa1165740:CDS
TCAGTCCATTGACCCCAACC+AGG 0.630731 7_4:-57709202 None:intergenic
TGACTCTGATGATGATTCTG+GGG 0.636517 7_4:+57705709 Msa1165740:CDS
AGATGATGAAGGACAGATGG+TGG 0.637774 7_4:+57709015 Msa1165740:CDS
CATGAAACAAGAACGCCAGA+GGG 0.639643 7_4:+57707409 Msa1165740:CDS
AATTGGTGCTGATAATAAGG+TGG 0.640246 7_4:+57708339 Msa1165740:CDS
CAATCTGATGATGACGACGA+CGG 0.643705 7_4:+57705653 Msa1165740:CDS
TGGCAGAAGAGTATTTGGAA+TGG 0.644354 7_4:+57708303 Msa1165740:CDS
TTACGATAACAGTGATAGCG+AGG 0.650293 7_4:+57708375 Msa1165740:CDS
TGATCAGGATCGTCACGAAG+AGG 0.652108 7_4:-57706065 None:intergenic
GTAGACCTAGCAACGCCGCT+AGG 0.654395 7_4:-57705214 None:intergenic
TCCAAAGGCAGATCAAGCGA+AGG 0.655899 7_4:+57706151 Msa1165740:CDS
CCATGAAACAAGAACGCCAG+AGG 0.656373 7_4:+57707408 Msa1165740:CDS
AGTGGCAACATTGAGAATGA+GGG 0.656546 7_4:+57708418 Msa1165740:CDS
AGCGAAGGTGGAAAGGAAGG+TGG 0.656706 7_4:+57706166 Msa1165740:CDS
TCGTAGGCAATAAGAAGGCG+AGG 0.658257 7_4:+57705940 Msa1165740:intron
TTTGTTGTGGTATAGAGGCG+TGG 0.661646 7_4:+57708157 Msa1165740:intron
TGATGGACGAATTACTATCG+AGG 0.680624 7_4:+57706031 Msa1165740:CDS
TATTATCATTGACAGAGACA+GGG 0.681643 7_4:-57705521 None:intergenic
AAAGACACTAGAAGTGCTGG+AGG 0.683825 7_4:+57707774 Msa1165740:CDS
TAGTCTTCTTGACATGAACA+AGG 0.684381 7_4:+57706406 Msa1165740:CDS
AGATTCCATGAAGAAGCTGG+AGG 0.687128 7_4:+57708240 Msa1165740:CDS
CCTTATTCAGAGAAATAGGG+AGG 0.695528 7_4:+57706229 Msa1165740:CDS
TTGAAGCAGAGAATGTGTTG+GGG 0.695574 7_4:-57705243 None:intergenic
CTCACGATAAACCAGAGCAG+CGG 0.696038 7_4:+57710851 Msa1165740:CDS
ATCCAAGAGATAATAGAACG+AGG 0.703965 7_4:+57711099 Msa1165740:three_prime_UTR
CGTCACGAAGAGGATTAAGG+AGG 0.705412 7_4:-57706055 None:intergenic
TTGGCAATCTCTAAACCTAG+CGG 0.710692 7_4:+57705199 Msa1165740:five_prime_UTR
CTTCAGCGTAAAATGCAACG+TGG 0.719561 7_4:+57707559 Msa1165740:CDS
CCAAAAGTAGCATCTACCAG+TGG 0.721080 7_4:+57708283 Msa1165740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAATTTGTAAAAAGTT+TGG - chr7_4:57709634-57709653 None:intergenic 10.0%
!!! TTTAATTTTTATCATATCGT+AGG + chr7_4:57705924-57705943 Msa1165740:intron 15.0%
!! TAAATTTCAAAATTCAAACA+TGG + chr7_4:57706631-57706650 Msa1165740:intron 15.0%
!!! AGCATAAAATCATAAATTTT+TGG + chr7_4:57706986-57707005 Msa1165740:intron 15.0%
!!! GCATAAAATCATAAATTTTT+GGG + chr7_4:57706987-57707006 Msa1165740:intron 15.0%
!! GAATAAATAATTACCATAAA+AGG - chr7_4:57707838-57707857 None:intergenic 15.0%
!!! AATATATACTTTTGAAATGT+TGG - chr7_4:57709688-57709707 None:intergenic 15.0%
!! TATATAATTTAGTGTATGTT+CGG + chr7_4:57710016-57710035 Msa1165740:intron 15.0%
!! TTGATTTATACATAAATGTA+TGG + chr7_4:57710240-57710259 Msa1165740:intron 15.0%
!! CTCTTAACTAATTTAAATAA+AGG - chr7_4:57710604-57710623 None:intergenic 15.0%
!!! ATGATTTTATTGGAAAAAAG+AGG + chr7_4:57705678-57705697 Msa1165740:CDS 20.0%
!! TATTTATTCTTACCATCAAA+AGG - chr7_4:57705794-57705813 None:intergenic 20.0%
!! TTTATGTAATTTATGTTAGC+TGG + chr7_4:57706440-57706459 Msa1165740:intron 20.0%
!! AATGAAAATTCAAGACATTT+GGG - chr7_4:57706568-57706587 None:intergenic 20.0%
!! AAATGAAAATTCAAGACATT+TGG - chr7_4:57706569-57706588 None:intergenic 20.0%
!!! GTTATTTTCCAATCATAAAA+GGG - chr7_4:57706729-57706748 None:intergenic 20.0%
!!! CTACAATTCAATAATTTGTA+AGG - chr7_4:57706828-57706847 None:intergenic 20.0%
!! CATATATGTTATTACATTGA+TGG - chr7_4:57707036-57707055 None:intergenic 20.0%
!!! TAATAGAATACGATTCTTTT+AGG + chr7_4:57707063-57707082 Msa1165740:intron 20.0%
!! TCATAAACAACAAAAAACAA+CGG - chr7_4:57707185-57707204 None:intergenic 20.0%
!! TAAAAGAAGATAAATGTTCT+TGG + chr7_4:57707465-57707484 Msa1165740:intron 20.0%
!!! ATATATCTTTTGCAAATGTT+TGG + chr7_4:57708049-57708068 Msa1165740:intron 20.0%
!!! GGTTTCTTAAATATTTTCTT+TGG + chr7_4:57708070-57708089 Msa1165740:intron 20.0%
!!! AATTTTCTGCTTTTAGTTTA+TGG + chr7_4:57708123-57708142 Msa1165740:intron 20.0%
!!! TGAATAATTTCCTATTTTCT+TGG + chr7_4:57708527-57708546 Msa1165740:CDS 20.0%
!!! TTTGTTTTACTTAATGGTAA+TGG + chr7_4:57708562-57708581 Msa1165740:CDS 20.0%
!!! TTGTTTTACTTAATGGTAAT+GGG + chr7_4:57708563-57708582 Msa1165740:CDS 20.0%
!! TTTGATATCTTCCATATATA+TGG + chr7_4:57708760-57708779 Msa1165740:intron 20.0%
!! AACAATTCAGTTTATATTCT+TGG - chr7_4:57708919-57708938 None:intergenic 20.0%
!! AAGAATATAAACTGAATTGT+TGG + chr7_4:57708918-57708937 Msa1165740:intron 20.0%
!! CAATGTTGATGTTTATAATT+CGG - chr7_4:57709410-57709429 None:intergenic 20.0%
!! ATAAAGAAGAAAAAAATCAG+TGG - chr7_4:57709594-57709613 None:intergenic 20.0%
!!! TTTTTTTCTTCTTTATTACC+AGG + chr7_4:57709598-57709617 Msa1165740:intron 20.0%
!!! TTTTTTCTTCTTTATTACCA+GGG + chr7_4:57709599-57709618 Msa1165740:intron 20.0%
!! TATATATTATGCTCTAATGT+TGG + chr7_4:57709700-57709719 Msa1165740:intron 20.0%
!!! ATAATTGATTTTGTCATGTT+AGG + chr7_4:57710078-57710097 Msa1165740:intron 20.0%
!! CAAAAGAATAAAATCAAAAC+CGG - chr7_4:57710365-57710384 None:intergenic 20.0%
!! TGATGATAAACACAAATAAA+AGG - chr7_4:57710568-57710587 None:intergenic 20.0%
!! AATTAGTTAAGAGTGATATT+TGG + chr7_4:57710611-57710630 Msa1165740:intron 20.0%
!! AACAATGAAACATTAATGTA+CGG - chr7_4:57711324-57711343 None:intergenic 20.0%
!!! ACATTAATGTTTCATTGTTT+TGG + chr7_4:57711325-57711344 Msa1165740:three_prime_UTR 20.0%
!!! ATCTCTTTTTTCAAAGATGA+AGG - chr7_4:57705393-57705412 None:intergenic 25.0%
! CGAAATGAACAATGAAATTA+AGG - chr7_4:57705587-57705606 None:intergenic 25.0%
!!! CAATTTGTTGATTTCTTAAC+CGG - chr7_4:57706100-57706119 None:intergenic 25.0%
!!! TTTTCATCAAAGTACTTAGT+AGG - chr7_4:57706257-57706276 None:intergenic 25.0%
! AACTAAATTTGAGAGGAATA+TGG + chr7_4:57706331-57706350 Msa1165740:CDS 25.0%
! AGTTCATCATGACAAAATTA+TGG + chr7_4:57706361-57706380 Msa1165740:CDS 25.0%
!! GGATTTGTTTGATAAATTAC+TGG + chr7_4:57706652-57706671 Msa1165740:intron 25.0%
!! TTTGATAAATTACTGGTTGT+TGG + chr7_4:57706659-57706678 Msa1165740:intron 25.0%
!!! GGTTATTTTCCAATCATAAA+AGG - chr7_4:57706730-57706749 None:intergenic 25.0%
! TTATGATTGGAAAATAACCT+TGG + chr7_4:57706731-57706750 Msa1165740:intron 25.0%
! AGAACAATAAAAATACTGAG+AGG - chr7_4:57706882-57706901 None:intergenic 25.0%
! ATATGTTATTACATTGATGG+CGG - chr7_4:57707033-57707052 None:intergenic 25.0%
! GTTAAAGAAAGTTAGATTGA+AGG + chr7_4:57707337-57707356 Msa1165740:CDS 25.0%
!! ATTGCTATCTTTACCTTTTA+TGG + chr7_4:57707822-57707841 Msa1165740:CDS 25.0%
! GGGTAACTAATATTTATTTC+AGG - chr7_4:57707882-57707901 None:intergenic 25.0%
! ATACATATATATACCATCAG+AGG - chr7_4:57707907-57707926 None:intergenic 25.0%
!!! CAGATGTTTGTTTTACTTAA+TGG + chr7_4:57708556-57708575 Msa1165740:CDS 25.0%
! TTTATGCATTTCTTGAAACT+TGG + chr7_4:57708596-57708615 Msa1165740:CDS 25.0%
! AGAAGTCTTCAAAGTTTAAT+AGG + chr7_4:57708852-57708871 Msa1165740:CDS 25.0%
!!! TGTAGAAGATGATTTTGAAA+AGG + chr7_4:57709123-57709142 Msa1165740:CDS 25.0%
! TGACTTTAAATACAAGGTTT+AGG + chr7_4:57709369-57709388 Msa1165740:intron 25.0%
! AAGATACTGATATCTTAAAC+TGG - chr7_4:57709568-57709587 None:intergenic 25.0%
!!! ATCTTTTATTTTGGTCAACA+CGG - chr7_4:57709920-57709939 None:intergenic 25.0%
!!! GTATTGTCGATCTTTTATTT+TGG - chr7_4:57709929-57709948 None:intergenic 25.0%
!!! CGGTTTTGATTTTATTCTTT+TGG + chr7_4:57710363-57710382 Msa1165740:intron 25.0%
!! TTTATTCTTTTGGATATGAC+AGG + chr7_4:57710373-57710392 Msa1165740:intron 25.0%
!!! TGTTTTGAAAAACTTACTTC+AGG - chr7_4:57710524-57710543 None:intergenic 25.0%
! TTAAGAGCTTTACTACATAA+AGG - chr7_4:57710645-57710664 None:intergenic 25.0%
! TATGTAGTAAAGCTCTTAAT+TGG + chr7_4:57710646-57710665 Msa1165740:intron 25.0%
! CTCTTAATTGGATATACTTA+CGG + chr7_4:57710658-57710677 Msa1165740:intron 25.0%
! TCTTAATTGGATATACTTAC+GGG + chr7_4:57710659-57710678 Msa1165740:intron 25.0%
! GCTACAAAAGAAAAAAATAC+AGG - chr7_4:57710746-57710765 None:intergenic 25.0%
! AAATATATTCTTGTATGTGC+AGG + chr7_4:57710774-57710793 Msa1165740:intron 25.0%
! TATAAAACCGATAGAATTTG+AGG + chr7_4:57710819-57710838 Msa1165740:CDS 25.0%
! ATGGTGAATATTTATAGAAC+TGG - chr7_4:57710997-57711016 None:intergenic 25.0%
!!! TTGTTTTGGTATTGAACTTT+TGG + chr7_4:57711339-57711358 Msa1165740:three_prime_UTR 25.0%
TTCTTTCTAGATTCTTCTTC+AGG - chr7_4:57705489-57705508 None:intergenic 30.0%
TATTATCATTGACAGAGACA+GGG - chr7_4:57705524-57705543 None:intergenic 30.0%
TTATTATCATTGACAGAGAC+AGG - chr7_4:57705525-57705544 None:intergenic 30.0%
CTGAATCCATTTGTTTGTTT+AGG + chr7_4:57705619-57705638 Msa1165740:intron 30.0%
TCTCATCCTAAACAAACAAA+TGG - chr7_4:57705628-57705647 None:intergenic 30.0%
TTTGATGAAAAGACAGATCT+AGG + chr7_4:57706266-57706285 Msa1165740:CDS 30.0%
TTGATGAAAAGACAGATCTA+GGG + chr7_4:57706267-57706286 Msa1165740:CDS 30.0%
!! TTCCTCTCAAATTTAGTTCT+GGG - chr7_4:57706329-57706348 None:intergenic 30.0%
! ATTCCTCTCAAATTTAGTTC+TGG - chr7_4:57706330-57706349 None:intergenic 30.0%
! TTTTACATTACCGATAGTAG+AGG + chr7_4:57706471-57706490 Msa1165740:intron 30.0%
ATTCTATGATCCTCTACTAT+CGG - chr7_4:57706484-57706503 None:intergenic 30.0%
TTATACATCAATCATGGACT+CGG - chr7_4:57706545-57706564 None:intergenic 30.0%
! TTTGGGTTATACATCAATCA+TGG - chr7_4:57706551-57706570 None:intergenic 30.0%
TACTTTGCGTTTAGCATTTA+TGG + chr7_4:57706601-57706620 Msa1165740:intron 30.0%
AATAAAAATACTGAGAGGAG+GGG - chr7_4:57706877-57706896 None:intergenic 30.0%
CAATAAAAATACTGAGAGGA+GGG - chr7_4:57706878-57706897 None:intergenic 30.0%
ACAATAAAAATACTGAGAGG+AGG - chr7_4:57706879-57706898 None:intergenic 30.0%
!!! GAATTTTTTTACTACTGCCA+TGG + chr7_4:57706943-57706962 Msa1165740:intron 30.0%
!!! CAGTTGGTGCTATTAATTTT+TGG - chr7_4:57707114-57707133 None:intergenic 30.0%
! TGTTGTTTATGATGCTTGAT+AGG + chr7_4:57707193-57707212 Msa1165740:intron 30.0%
TGCTTGATAGGTTTCTATAA+AGG + chr7_4:57707205-57707224 Msa1165740:intron 30.0%
! TAACAGACGATGATATGTTT+TGG - chr7_4:57707321-57707340 None:intergenic 30.0%
ATGCGTTCCTAAAATAAGTT+GGG - chr7_4:57707508-57707527 None:intergenic 30.0%
! TCTTTGAAAATGTTCAGTCA+CGG - chr7_4:57707617-57707636 None:intergenic 30.0%
! AAAATCTTGTTTGCCTTATC+CGG - chr7_4:57707739-57707758 None:intergenic 30.0%
TATATATACCATCAGAGGTT+GGG - chr7_4:57707902-57707921 None:intergenic 30.0%
ATATATATACCATCAGAGGT+TGG - chr7_4:57707903-57707922 None:intergenic 30.0%
ATATAAGCCATAGTCTTTGT+GGG - chr7_4:57707940-57707959 None:intergenic 30.0%
TATATAAGCCATAGTCTTTG+TGG - chr7_4:57707941-57707960 None:intergenic 30.0%
AATACATGTCCTATTGATAC+TGG + chr7_4:57707997-57708016 Msa1165740:intron 30.0%
ATATATGCCTTCATCATAGT+TGG - chr7_4:57708035-57708054 None:intergenic 30.0%
AATTACCATCTGACAATTTC+AGG - chr7_4:57708107-57708126 None:intergenic 30.0%
CTTCATATTCTTGTACAGTA+AGG - chr7_4:57708222-57708241 None:intergenic 30.0%
ATTATCAGCACCAATTGTTT+GGG - chr7_4:57708335-57708354 None:intergenic 30.0%
TATTATCAGCACCAATTGTT+TGG - chr7_4:57708336-57708355 None:intergenic 30.0%
!! AACAATTGGTGCTGATAATA+AGG + chr7_4:57708336-57708355 Msa1165740:CDS 30.0%
!!! TCGCAAAGAATCTGTTTTTA+AGG + chr7_4:57708504-57708523 Msa1165740:CDS 30.0%
GATGAGATTGTAAAAAATCC+CGG + chr7_4:57708631-57708650 Msa1165740:CDS 30.0%
ATGAGATTGTAAAAAATCCC+GGG + chr7_4:57708632-57708651 Msa1165740:CDS 30.0%
! GAAACTTCGTATGTAGTTTT+TGG - chr7_4:57708658-57708677 None:intergenic 30.0%
CCAACAAAATGCCATATATA+TGG - chr7_4:57708774-57708793 None:intergenic 30.0%
! CCATATATATGGCATTTTGT+TGG + chr7_4:57708771-57708790 Msa1165740:intron 30.0%
! TTGGACTGATTTACTGATAA+TGG + chr7_4:57708790-57708809 Msa1165740:intron 30.0%
! TGGACTGATTTACTGATAAT+GGG + chr7_4:57708791-57708810 Msa1165740:intron 30.0%
!! AGCTCTGAAAAAGATCAATT+GGG + chr7_4:57708977-57708996 Msa1165740:CDS 30.0%
ACTGATATACAGCAAAAGAA+AGG + chr7_4:57709220-57709239 Msa1165740:CDS 30.0%
GGTTAGTGACTTTAAATACA+AGG + chr7_4:57709363-57709382 Msa1165740:intron 30.0%
! ATAATTCGGAAGCATATGAA+AGG - chr7_4:57709396-57709415 None:intergenic 30.0%
ATCAACATTGAAGACTATGT+CGG + chr7_4:57709420-57709439 Msa1165740:intron 30.0%
GTGAACATTACAAAGATTTG+TGG + chr7_4:57709479-57709498 Msa1165740:intron 30.0%
AGATGTTTACATCAACTCAA+AGG - chr7_4:57709750-57709769 None:intergenic 30.0%
! TGCGTCTCAAAATCTAATTT+TGG - chr7_4:57709812-57709831 None:intergenic 30.0%
! AGTCCAAACTGATTTCAAAT+AGG + chr7_4:57709835-57709854 Msa1165740:intron 30.0%
! AAGCCTATTTGAAATCAGTT+TGG - chr7_4:57709841-57709860 None:intergenic 30.0%
! GAAGTCAAAATTGATTCTAG+AGG + chr7_4:57710052-57710071 Msa1165740:intron 30.0%
!! TTTCAAGTTAGAATCAGCTA+TGG - chr7_4:57710132-57710151 None:intergenic 30.0%
ATAAACAGTACAGAAGACAA+TGG - chr7_4:57710317-57710336 None:intergenic 30.0%
! TCTTTGGAAGTATAAGGAAA+AGG - chr7_4:57710425-57710444 None:intergenic 30.0%
! AAGACATCTTTGGAAGTATA+AGG - chr7_4:57710431-57710450 None:intergenic 30.0%
!! AGTTTTTCAAAACAGTTCCT+TGG + chr7_4:57710530-57710549 Msa1165740:intron 30.0%
AAAGGATAAAATGTTTGCCA+AGG - chr7_4:57710550-57710569 None:intergenic 30.0%
!! ATCGGTTTTATAATAACACC+TGG - chr7_4:57710811-57710830 None:intergenic 30.0%
TTCACTTCCTCAAATTCTAT+CGG - chr7_4:57710829-57710848 None:intergenic 30.0%
AAGAAGTTGAATAGAACCAA+AGG + chr7_4:57710892-57710911 Msa1165740:CDS 30.0%
!!! CTTCAACTTCGACTTTTTTA+TGG - chr7_4:57710932-57710951 None:intergenic 30.0%
CATAAAAAAGTCGAAGTTGA+AGG + chr7_4:57710930-57710949 Msa1165740:CDS 30.0%
! ACCATTTTCAGTGTATTCTT+TGG + chr7_4:57711012-57711031 Msa1165740:three_prime_UTR 30.0%
TCCAAAGAATACACTGAAAA+TGG - chr7_4:57711016-57711035 None:intergenic 30.0%
!! AGAGAAAAATAGACCGATTT+TGG + chr7_4:57711058-57711077 Msa1165740:three_prime_UTR 30.0%
!! AAAAATAGACCGATTTTGGT+AGG + chr7_4:57711062-57711081 Msa1165740:three_prime_UTR 30.0%
GTGATACTTTGAATACTCAA+GGG - chr7_4:57711136-57711155 None:intergenic 30.0%
TGTGATACTTTGAATACTCA+AGG - chr7_4:57711137-57711156 None:intergenic 30.0%
CAGCTAAAGCATAACAAATT+GGG - chr7_4:57711204-57711223 None:intergenic 30.0%
ACAGCTAAAGCATAACAAAT+TGG - chr7_4:57711205-57711224 None:intergenic 30.0%
TTGTTATGCTTTAGCTGTTA+AGG + chr7_4:57711207-57711226 Msa1165740:three_prime_UTR 30.0%
TCACTAGAACTAGAATCATC+AGG + chr7_4:57705173-57705192 Msa1165740:five_prime_UTR 35.0%
AACTAGAATCATCAGGTCTT+TGG + chr7_4:57705180-57705199 Msa1165740:five_prime_UTR 35.0%
CTTCAACGCTTCAACAAAAA+TGG + chr7_4:57705260-57705279 Msa1165740:exon 35.0%
!!! TAGACTTCTTTTTTCCGATG+TGG - chr7_4:57705326-57705345 None:intergenic 35.0%
TCGATTTCATCAACATCAAC+AGG - chr7_4:57705435-57705454 None:intergenic 35.0%
ATACCTCGAAATCAGAAGAA+AGG - chr7_4:57705551-57705570 None:intergenic 35.0%
! ATTGACTCTGATGATGATTC+TGG + chr7_4:57705707-57705726 Msa1165740:CDS 35.0%
! TTGACTCTGATGATGATTCT+GGG + chr7_4:57705708-57705727 Msa1165740:CDS 35.0%
AAGATGATGAGAGACATGAA+AGG + chr7_4:57705735-57705754 Msa1165740:CDS 35.0%
AGGATGTTACAACGAATTAC+CGG + chr7_4:57705755-57705774 Msa1165740:CDS 35.0%
TCATATCGTAGGCAATAAGA+AGG + chr7_4:57705935-57705954 Msa1165740:intron 35.0%
GAGGAAGAATGATGTTATTC+CGG + chr7_4:57705959-57705978 Msa1165740:CDS 35.0%
CAAAGAAACAAGTCACAAAG+TGG + chr7_4:57706201-57706220 Msa1165740:CDS 35.0%
AACCCCTTATTCAGAGAAAT+AGG + chr7_4:57706225-57706244 Msa1165740:CDS 35.0%
ACCCCTTATTCAGAGAAATA+GGG + chr7_4:57706226-57706245 Msa1165740:CDS 35.0%
! TCCCTATTTCTCTGAATAAG+GGG - chr7_4:57706230-57706249 None:intergenic 35.0%
! CTCCCTATTTCTCTGAATAA+GGG - chr7_4:57706231-57706250 None:intergenic 35.0%
!! GATCTAGGGTTTTCAACTAT+AGG + chr7_4:57706281-57706300 Msa1165740:CDS 35.0%
AACCCAGAACTAAATTTGAG+AGG + chr7_4:57706324-57706343 Msa1165740:CDS 35.0%
ATGGAAGCTCATAAAAACGA+TGG + chr7_4:57706380-57706399 Msa1165740:CDS 35.0%
TAGTCTTCTTGACATGAACA+AGG + chr7_4:57706406-57706425 Msa1165740:CDS 35.0%
! AAACCTGATTGTCTTTTTCC+AGG + chr7_4:57706507-57706526 Msa1165740:intron 35.0%
! GTTGTTCTCCCTTTTATGAT+TGG + chr7_4:57706718-57706737 Msa1165740:intron 35.0%
TGATTGGAAAATAACCTTGG+CGG + chr7_4:57706734-57706753 Msa1165740:intron 35.0%
TAACTGAGGAGGAATTAAGA+TGG + chr7_4:57706760-57706779 Msa1165740:intron 35.0%
ATAAAAATACTGAGAGGAGG+GGG - chr7_4:57706876-57706895 None:intergenic 35.0%
! TTTCTACATGGTTGGTTAAG+AGG - chr7_4:57706906-57706925 None:intergenic 35.0%
AACCAACCATGTAGAAAGAT+TGG + chr7_4:57706909-57706928 Msa1165740:intron 35.0%
ATCCAATCTTTCTACATGGT+TGG - chr7_4:57706914-57706933 None:intergenic 35.0%
TGCAATCCAATCTTTCTACA+TGG - chr7_4:57706918-57706937 None:intergenic 35.0%
ATATCCCACTTAAAACACCA+TGG - chr7_4:57706963-57706982 None:intergenic 35.0%
!! ATGGTGTTTTAAGTGGGATA+TGG + chr7_4:57706962-57706981 Msa1165740:intron 35.0%
TTGGCATGAGTAATTGAGTA+TGG - chr7_4:57707095-57707114 None:intergenic 35.0%
AGAAATTTGAACAGTGCAGT+TGG - chr7_4:57707130-57707149 None:intergenic 35.0%
GGTTTCTATAAAGGATGAGA+AGG + chr7_4:57707214-57707233 Msa1165740:intron 35.0%
TCTATAAAGGATGAGAAGGA+TGG + chr7_4:57707218-57707237 Msa1165740:CDS 35.0%
CTATAAAGGATGAGAAGGAT+GGG + chr7_4:57707219-57707238 Msa1165740:CDS 35.0%
TCATCTCATGACGAAAAAGA+AGG - chr7_4:57707271-57707290 None:intergenic 35.0%
!! TCTTTTTCGTCATGAGATGA+AGG + chr7_4:57707271-57707290 Msa1165740:CDS 35.0%
!! CTCACTTCCCAACTTATTTT+AGG + chr7_4:57707498-57707517 Msa1165740:intron 35.0%
CATGCGTTCCTAAAATAAGT+TGG - chr7_4:57707509-57707528 None:intergenic 35.0%
GACACAAACATAAAAGTCCA+TGG + chr7_4:57707536-57707555 Msa1165740:CDS 35.0%
! TGAACATTTTCAAAGACACG+AGG + chr7_4:57707621-57707640 Msa1165740:CDS 35.0%
GACTAGAAAAAGGAAAACCA+TGG + chr7_4:57707648-57707667 Msa1165740:CDS 35.0%
ATGTCCTATTGATACTGGAA+AGG + chr7_4:57708002-57708021 Msa1165740:intron 35.0%
TGTCCTATTGATACTGGAAA+GGG + chr7_4:57708003-57708022 Msa1165740:intron 35.0%
TAAAGCCTGAAATTGTCAGA+TGG + chr7_4:57708099-57708118 Msa1165740:intron 35.0%
CTATACCACAACAAATCAGA+TGG - chr7_4:57708152-57708171 None:intergenic 35.0%
!! TCTGATTTGTTGTGGTATAG+AGG + chr7_4:57708152-57708171 Msa1165740:intron 35.0%
!! AATTGGTGCTGATAATAAGG+TGG + chr7_4:57708339-57708358 Msa1165740:CDS 35.0%
TCTGAGAAGTCCAAGAAAAT+AGG - chr7_4:57708540-57708559 None:intergenic 35.0%
! TACCTTTTTCCATGTATCTG+AGG - chr7_4:57708689-57708708 None:intergenic 35.0%
! GGACTGATTTACTGATAATG+GGG + chr7_4:57708792-57708811 Msa1165740:intron 35.0%
CAAAGTTTAATAGGCCTGTT+AGG + chr7_4:57708861-57708880 Msa1165740:CDS 35.0%
!! GAGCTCTGAAAAAGATCAAT+TGG + chr7_4:57708976-57708995 Msa1165740:intron 35.0%
TGAAAAAGATCAATTGGGAG+AGG + chr7_4:57708982-57709001 Msa1165740:CDS 35.0%
TGAGATGGAAGTTCATAAGA+TGG - chr7_4:57709067-57709086 None:intergenic 35.0%
TTATGAACTTCCATCTCAAG+AGG + chr7_4:57709069-57709088 Msa1165740:CDS 35.0%
AAAAGAAAGGTTTACCATCC+TGG + chr7_4:57709233-57709252 Msa1165740:CDS 35.0%
ATGAAAGTTCCCAGAGAAAA+AGG + chr7_4:57709269-57709288 Msa1165740:CDS 35.0%
TGAAAGTTCCCAGAGAAAAA+GGG + chr7_4:57709270-57709289 Msa1165740:CDS 35.0%
TATTATGCTCTAATGTTGGC+AGG + chr7_4:57709704-57709723 Msa1165740:intron 35.0%
!! AATACTTCAGTGTTGGTCTA+CGG + chr7_4:57709944-57709963 Msa1165740:intron 35.0%
!!! AATTTTGACTTCTCCAGAAG+TGG - chr7_4:57710044-57710063 None:intergenic 35.0%
!! CGTTTTTGTTTGGAGTTTCT+CGG - chr7_4:57710399-57710418 None:intergenic 35.0%
CGAGAAACTCCAAACAAAAA+CGG + chr7_4:57710397-57710416 Msa1165740:CDS 35.0%
ACTCTGATGAAAGACATCTT+TGG - chr7_4:57710441-57710460 None:intergenic 35.0%
CTTTACTACATAAAGGAGGA+CGG - chr7_4:57710638-57710657 None:intergenic 35.0%
AGAGCTTTACTACATAAAGG+AGG - chr7_4:57710642-57710661 None:intergenic 35.0%
! TTGGATATACTTACGGGTTT+TGG + chr7_4:57710665-57710684 Msa1165740:intron 35.0%
!!! ATATACTTACGGGTTTTGGA+GGG + chr7_4:57710669-57710688 Msa1165740:intron 35.0%
TATATTCTTGTATGTGCAGG+TGG + chr7_4:57710777-57710796 Msa1165740:intron 35.0%
GTCAAGGGAAAAAAGTAAGT+GGG + chr7_4:57710952-57710971 Msa1165740:exon 35.0%
! TTCTTTGGAAAGATGCACTT+CGG + chr7_4:57711027-57711046 Msa1165740:three_prime_UTR 35.0%
ATCCAAGAGATAATAGAACG+AGG + chr7_4:57711099-57711118 Msa1165740:three_prime_UTR 35.0%
TCCAAGAGATAATAGAACGA+GGG + chr7_4:57711100-57711119 Msa1165740:three_prime_UTR 35.0%
TTATGCTTTAGCTGTTAAGG+TGG + chr7_4:57711210-57711229 Msa1165740:three_prime_UTR 35.0%
! CTGCGACAATTTTCTTATCT+TGG + chr7_4:57711251-57711270 Msa1165740:three_prime_UTR 35.0%
TTGGCAATCTCTAAACCTAG+CGG + chr7_4:57705199-57705218 Msa1165740:five_prime_UTR 40.0%
TTGAAGCAGAGAATGTGTTG+GGG - chr7_4:57705246-57705265 None:intergenic 40.0%
GTTGAAGCAGAGAATGTGTT+GGG - chr7_4:57705247-57705266 None:intergenic 40.0%
GAGAAGAAGCGAAATGAAAG+AGG + chr7_4:57705285-57705304 Msa1165740:CDS 40.0%
!!! ACTTCTTTTTTCCGATGTGG+CGG - chr7_4:57705323-57705342 None:intergenic 40.0%
AGAAGACTTCCGACAATCAA+CGG + chr7_4:57705346-57705365 Msa1165740:CDS 40.0%
!! GGTTTTCTTCCGTTGATTGT+CGG - chr7_4:57705358-57705377 None:intergenic 40.0%
GACAATCAACGGAAGAAAAC+CGG + chr7_4:57705357-57705376 Msa1165740:CDS 40.0%
TTCAAAGATGAAGGCAAACG+AGG - chr7_4:57705384-57705403 None:intergenic 40.0%
CATCAACATCAACAGGAGTA+GGG - chr7_4:57705428-57705447 None:intergenic 40.0%
TCATCAACATCAACAGGAGT+AGG - chr7_4:57705429-57705448 None:intergenic 40.0%
TGACCTTTCTTCTGATTTCG+AGG + chr7_4:57705545-57705564 Msa1165740:CDS 40.0%
! GACGACGGCTATGATTTTAT+TGG + chr7_4:57705668-57705687 Msa1165740:CDS 40.0%
! TGACTCTGATGATGATTCTG+GGG + chr7_4:57705709-57705728 Msa1165740:CDS 40.0%
! TTACCATCAAAAGGCTTGCT+CGG - chr7_4:57705785-57705804 None:intergenic 40.0%
TCAGACTCTAGATATAGCTC+CGG - chr7_4:57705981-57706000 None:intergenic 40.0%
TAATCCTAGTCACGATGTTG+TGG + chr7_4:57706004-57706023 Msa1165740:CDS 40.0%
! TGATGGACGAATTACTATCG+AGG + chr7_4:57706031-57706050 Msa1165740:CDS 40.0%
ATCCTGATCATTCAAGACTC+CGG + chr7_4:57706078-57706097 Msa1165740:CDS 40.0%
! CCTCCCTATTTCTCTGAATA+AGG - chr7_4:57706232-57706251 None:intergenic 40.0%
CCTTATTCAGAGAAATAGGG+AGG + chr7_4:57706229-57706248 Msa1165740:CDS 40.0%
GAAGCTCATAAAAACGATGG+TGG + chr7_4:57706383-57706402 Msa1165740:CDS 40.0%
GAACCTGGAAAAAGACAATC+AGG - chr7_4:57706513-57706532 None:intergenic 40.0%
!! TACTGCCATGGTGTTTTAAG+TGG + chr7_4:57706955-57706974 Msa1165740:intron 40.0%
!! ACTGCCATGGTGTTTTAAGT+GGG + chr7_4:57706956-57706975 Msa1165740:intron 40.0%
!! GTTATTACATTGATGGCGGA+TGG - chr7_4:57707029-57707048 None:intergenic 40.0%
ATAACCAGGCTGCTAAATTG+CGG + chr7_4:57707243-57707262 Msa1165740:CDS 40.0%
AGAGTCTTCTCAGTTGGAAA+TGG + chr7_4:57707361-57707380 Msa1165740:CDS 40.0%
GCATATTCATTAGCAGCTTC+AGG - chr7_4:57707389-57707408 None:intergenic 40.0%
GGTTTAGATAAGCAGGATGA+AGG + chr7_4:57707580-57707599 Msa1165740:CDS 40.0%
ACGAGGAACTGACTAGAAAA+AGG + chr7_4:57707638-57707657 Msa1165740:CDS 40.0%
ATCAGCAGCATTCTCATCAT+CGG - chr7_4:57707710-57707729 None:intergenic 40.0%
! ACAAAAGACACTAGAAGTGC+TGG + chr7_4:57707771-57707790 Msa1165740:CDS 40.0%
AGATGATGAAATGCCCAAGT+CGG + chr7_4:57707798-57707817 Msa1165740:CDS 40.0%
AAAGATAGCAATCCCGACTT+GGG - chr7_4:57707814-57707833 None:intergenic 40.0%
TAAAGATAGCAATCCCGACT+TGG - chr7_4:57707815-57707834 None:intergenic 40.0%
ATTAGTTACCCAACCTCTGA+TGG + chr7_4:57707891-57707910 Msa1165740:intron 40.0%
TCACCCTTTCCAGTATCAAT+AGG - chr7_4:57708009-57708028 None:intergenic 40.0%
GTGATCTCCAACTATGATGA+AGG + chr7_4:57708025-57708044 Msa1165740:intron 40.0%
TACCACAACAAATCAGATGG+AGG - chr7_4:57708149-57708168 None:intergenic 40.0%
TGAAGATTCCATGAAGAAGC+TGG + chr7_4:57708237-57708256 Msa1165740:CDS 40.0%
!! TGGCAGAAGAGTATTTGGAA+TGG + chr7_4:57708303-57708322 Msa1165740:CDS 40.0%
ATGGCTAAAGCCCAAACAAT+TGG + chr7_4:57708322-57708341 Msa1165740:CDS 40.0%
! TTACGATAACAGTGATAGCG+AGG + chr7_4:57708375-57708394 Msa1165740:CDS 40.0%
!!! CTCAATGTTGCCACTTTTCT+TGG - chr7_4:57708413-57708432 None:intergenic 40.0%
AAGTGGCAACATTGAGAATG+AGG + chr7_4:57708417-57708436 Msa1165740:CDS 40.0%
AGTGGCAACATTGAGAATGA+GGG + chr7_4:57708418-57708437 Msa1165740:CDS 40.0%
!!! TTCGTATGTAGTTTTTGGCC+CGG - chr7_4:57708653-57708672 None:intergenic 40.0%
! CCATGTATCTGAGGCAAATA+TGG - chr7_4:57708680-57708699 None:intergenic 40.0%
CCATATTTGCCTCAGATACA+TGG + chr7_4:57708677-57708696 Msa1165740:CDS 40.0%
TGCCTCAGATACATGGAAAA+AGG + chr7_4:57708684-57708703 Msa1165740:CDS 40.0%
!! TGATTTACTGATAATGGGGC+AGG + chr7_4:57708796-57708815 Msa1165740:intron 40.0%
GGGCAGGCAAAAAACAAAAA+TGG + chr7_4:57708812-57708831 Msa1165740:intron 40.0%
GATAGCGATACAGATGATGA+AGG + chr7_4:57709004-57709023 Msa1165740:CDS 40.0%
TACAGATGATGAAGGACAGA+TGG + chr7_4:57709012-57709031 Msa1165740:CDS 40.0%
TTCATGTTCTTTGACCATCC+AGG - chr7_4:57709254-57709273 None:intergenic 40.0%
AGCATCCTTTCTCTTCTTGA+GGG - chr7_4:57709302-57709321 None:intergenic 40.0%
! CTCTGAGAAATCAAGCAAGA+AGG + chr7_4:57709342-57709361 Msa1165740:CDS 40.0%
GACTATGTCGGAAATTGCAA+TGG + chr7_4:57709432-57709451 Msa1165740:intron 40.0%
TACCATATGTTGTTGCAGAG+TGG + chr7_4:57709530-57709549 Msa1165740:intron 40.0%
ACCATATGTTGTTGCAGAGT+GGG + chr7_4:57709531-57709550 Msa1165740:intron 40.0%
AAGTTTGGCAAAGATAACCC+TGG - chr7_4:57709619-57709638 None:intergenic 40.0%
GATCGACAATACTTCAGTGT+TGG + chr7_4:57709937-57709956 Msa1165740:intron 40.0%
! TGTCATGTTAGGTTGTTCTC+AGG + chr7_4:57710089-57710108 Msa1165740:intron 40.0%
CAAGTTAGAATCAGCTATGG+AGG - chr7_4:57710129-57710148 None:intergenic 40.0%
! CTGGCAAGTGGATTTATGAT+AGG - chr7_4:57710291-57710310 None:intergenic 40.0%
AACAGTACAGAAGACAATGG+TGG - chr7_4:57710314-57710333 None:intergenic 40.0%
TCTCAGTCAAGTTATTGTGC+CGG + chr7_4:57710343-57710362 Msa1165740:intron 40.0%
!!! GAAAAGGCACCGTTTTTGTT+TGG - chr7_4:57710409-57710428 None:intergenic 40.0%
CTACATTTGGACCTCTTACT+CGG + chr7_4:57710498-57710517 Msa1165740:CDS 40.0%
!! GATATACTTACGGGTTTTGG+AGG + chr7_4:57710668-57710687 Msa1165740:intron 40.0%
AAAGTCGAAGTTGAAGGTCA+AGG + chr7_4:57710936-57710955 Msa1165740:CDS 40.0%
AAGTCGAAGTTGAAGGTCAA+GGG + chr7_4:57710937-57710956 Msa1165740:CDS 40.0%
GGTCAAGGGAAAAAAGTAAG+TGG + chr7_4:57710951-57710970 Msa1165740:exon 40.0%
!! AATAGACCGATTTTGGTAGG+CGG + chr7_4:57711065-57711084 Msa1165740:three_prime_UTR 40.0%
TCCCTCGTTCTATTATCTCT+TGG - chr7_4:57711104-57711123 None:intergenic 40.0%
CGTTGAAGCAGAGAATGTGT+TGG - chr7_4:57705248-57705267 None:intergenic 45.0%
CAGGAGTAGGGTTTAAGTGT+TGG - chr7_4:57705416-57705435 None:intergenic 45.0%
! CAATCTGATGATGACGACGA+CGG + chr7_4:57705653-57705672 Msa1165740:CDS 45.0%
GATCGTCACGAAGAGGATTA+AGG - chr7_4:57706061-57706080 None:intergenic 45.0%
AACCGGAGTCTTGAATGATC+AGG - chr7_4:57706083-57706102 None:intergenic 45.0%
TGTTCATGCACCACTTCCAA+AGG + chr7_4:57706136-57706155 Msa1165740:CDS 45.0%
ATCATGGACTCGGAATGCAT+GGG - chr7_4:57706535-57706554 None:intergenic 45.0%
AATCATGGACTCGGAATGCA+TGG - chr7_4:57706536-57706555 None:intergenic 45.0%
GAGGGGGAGATTAAATAGAG+AGG - chr7_4:57706860-57706879 None:intergenic 45.0%
!! ATTACATTGATGGCGGATGG+AGG - chr7_4:57707026-57707045 None:intergenic 45.0%
CATGAAACAAGAACGCCAGA+GGG + chr7_4:57707409-57707428 Msa1165740:CDS 45.0%
ACATATATACCTCAGCCCTC+TGG - chr7_4:57707427-57707446 None:intergenic 45.0%
! TGCATTTTACGCTGAAGCCA+TGG - chr7_4:57707556-57707575 None:intergenic 45.0%
CTTCAGCGTAAAATGCAACG+TGG + chr7_4:57707559-57707578 Msa1165740:CDS 45.0%
GCAACGTGGTTTAGATAAGC+AGG + chr7_4:57707573-57707592 Msa1165740:CDS 45.0%
!! GAATGCTGCTGATTCTGATC+CGG + chr7_4:57707717-57707736 Msa1165740:CDS 45.0%
!! TGCTGATTCTGATCCGGATA+AGG + chr7_4:57707723-57707742 Msa1165740:CDS 45.0%
!! AAAGACACTAGAAGTGCTGG+AGG + chr7_4:57707774-57707793 Msa1165740:CDS 45.0%
GATGATGAAATGCCCAAGTC+GGG + chr7_4:57707799-57707818 Msa1165740:CDS 45.0%
CCATAGTCTTTGTGGGCATT+AGG - chr7_4:57707933-57707952 None:intergenic 45.0%
CCTAATGCCCACAAAGACTA+TGG + chr7_4:57707930-57707949 Msa1165740:intron 45.0%
! TTTGTTGTGGTATAGAGGCG+TGG + chr7_4:57708157-57708176 Msa1165740:intron 45.0%
AGATTCCATGAAGAAGCTGG+AGG + chr7_4:57708240-57708259 Msa1165740:CDS 45.0%
AGAATCCTCCAGCTTCTTCA+TGG - chr7_4:57708248-57708267 None:intergenic 45.0%
AAGAAGCTGGAGGATTCTGA+TGG + chr7_4:57708250-57708269 Msa1165740:CDS 45.0%
!!! CCACTGGTAGATGCTACTTT+TGG - chr7_4:57708286-57708305 None:intergenic 45.0%
CCAAAAGTAGCATCTACCAG+TGG + chr7_4:57708283-57708302 Msa1165740:CDS 45.0%
!! ACCAGTGGCAGAAGAGTATT+TGG + chr7_4:57708298-57708317 Msa1165740:CDS 45.0%
TCCAAATACTCTTCTGCCAC+TGG - chr7_4:57708302-57708321 None:intergenic 45.0%
! TGATAGCGAGGATGACTTTG+AGG + chr7_4:57708387-57708406 Msa1165740:CDS 45.0%
!! GACTTTGAGGCCAAGAAAAG+TGG + chr7_4:57708400-57708419 Msa1165740:CDS 45.0%
!!! TCGTATGTAGTTTTTGGCCC+GGG - chr7_4:57708652-57708671 None:intergenic 45.0%
ACCTTTACATCGTGCCTAAC+AGG - chr7_4:57708878-57708897 None:intergenic 45.0%
AGATGATGAAGGACAGATGG+TGG + chr7_4:57709015-57709034 Msa1165740:CDS 45.0%
CATCTCAAGAGGAGCTCATT+CGG + chr7_4:57709080-57709099 Msa1165740:CDS 45.0%
! TCATTCGGCAAGCTTTTGCT+GGG + chr7_4:57709095-57709114 Msa1165740:CDS 45.0%
! GCTCGGGATTTTCTTCATTG+AGG - chr7_4:57709162-57709181 None:intergenic 45.0%
TAATAGAGGCTTCTCAGGCT+CGG - chr7_4:57709179-57709198 None:intergenic 45.0%
GGAAGTAATAGAGGCTTCTC+AGG - chr7_4:57709184-57709203 None:intergenic 45.0%
GAGAAGCCTCTATTACTTCC+TGG + chr7_4:57709184-57709203 Msa1165740:CDS 45.0%
AGCCTCTATTACTTCCTGGT+TGG + chr7_4:57709188-57709207 Msa1165740:CDS 45.0%
GCCTCTATTACTTCCTGGTT+GGG + chr7_4:57709189-57709208 Msa1165740:CDS 45.0%
CCTCTATTACTTCCTGGTTG+GGG + chr7_4:57709190-57709209 Msa1165740:CDS 45.0%
GAAAGGTTTACCATCCTGGA+TGG + chr7_4:57709237-57709256 Msa1165740:CDS 45.0%
TGTTCTTTGACCATCCAGGA+TGG - chr7_4:57709250-57709269 None:intergenic 45.0%
! GGCTTCTTCCCTTTTTCTCT+GGG - chr7_4:57709281-57709300 None:intergenic 45.0%
AGAAGCCCTCAAGAAGAGAA+AGG + chr7_4:57709294-57709313 Msa1165740:CDS 45.0%
GAGCATCCTTTCTCTTCTTG+AGG - chr7_4:57709303-57709322 None:intergenic 45.0%
TCCCACTCTGCAACAACATA+TGG - chr7_4:57709535-57709554 None:intergenic 45.0%
ATTCAGTTCCTCCAGCCAAA+TGG - chr7_4:57709977-57709996 None:intergenic 45.0%
TGTATGTTCGGTTCCACTTC+TGG + chr7_4:57710028-57710047 Msa1165740:intron 45.0%
GGGTTAGATTCAGGTCCAAT+GGG - chr7_4:57710473-57710492 None:intergenic 45.0%
CATTGGACCTGAATCTAACC+CGG + chr7_4:57710472-57710491 Msa1165740:CDS 45.0%
TCTAACCCGGCAACTACATT+TGG + chr7_4:57710485-57710504 Msa1165740:CDS 45.0%
AGAGGTCCAAATGTAGTTGC+CGG - chr7_4:57710494-57710513 None:intergenic 45.0%
! GGCTTTGCTATCATTGCCTT+TGG - chr7_4:57710911-57710930 None:intergenic 45.0%
AAGCTTCCGCCTACCAAAAT+CGG - chr7_4:57711074-57711093 None:intergenic 45.0%
!!! TTAATTTTTTTTTACTTTTT+CGG + chr7_4:57706791-57706810 Msa1165740:intron 5.0%
! TTTTCCGATGTGGCGGTTGT+TGG - chr7_4:57705316-57705335 None:intergenic 50.0%
AGATGAAGGCAAACGAGGAC+CGG - chr7_4:57705379-57705398 None:intergenic 50.0%
! CTCTGATGATGATTCTGGGG+AGG + chr7_4:57705712-57705731 Msa1165740:CDS 50.0%
! AAAAGGCTTGCTCGGCATAC+CGG - chr7_4:57705777-57705796 None:intergenic 50.0%
! ATGCCGAGCAAGCCTTTTGA+TGG + chr7_4:57705779-57705798 Msa1165740:CDS 50.0%
TCTGCAGCAACAACAGCTAG+TGG - chr7_4:57705869-57705888 None:intergenic 50.0%
TCGTAGGCAATAAGAAGGCG+AGG + chr7_4:57705940-57705959 Msa1165740:intron 50.0%
CCTTCCACAACATCGTGACT+AGG - chr7_4:57706011-57706030 None:intergenic 50.0%
CCTAGTCACGATGTTGTGGA+AGG + chr7_4:57706008-57706027 Msa1165740:CDS 50.0%
CACGATGTTGTGGAAGGTGA+TGG + chr7_4:57706014-57706033 Msa1165740:CDS 50.0%
CGTCACGAAGAGGATTAAGG+AGG - chr7_4:57706058-57706077 None:intergenic 50.0%
TGATCAGGATCGTCACGAAG+AGG - chr7_4:57706068-57706087 None:intergenic 50.0%
! GCTTGATCTGCCTTTGGAAG+TGG - chr7_4:57706149-57706168 None:intergenic 50.0%
TCCAAAGGCAGATCAAGCGA+AGG + chr7_4:57706151-57706170 Msa1165740:CDS 50.0%
ACCTTCGCTTGATCTGCCTT+TGG - chr7_4:57706155-57706174 None:intergenic 50.0%
AAAGGCAGATCAAGCGAAGG+TGG + chr7_4:57706154-57706173 Msa1165740:CDS 50.0%
CAGATCAAGCGAAGGTGGAA+AGG + chr7_4:57706159-57706178 Msa1165740:CDS 50.0%
TCAAGCGAAGGTGGAAAGGA+AGG + chr7_4:57706163-57706182 Msa1165740:CDS 50.0%
! AACCTTGGCGGACATAACTG+AGG + chr7_4:57706746-57706765 Msa1165740:intron 50.0%
TGAGAAGGATGGGCATAACC+AGG + chr7_4:57707229-57707248 Msa1165740:CDS 50.0%
GAAGGCAGAGTCTTCTCAGT+TGG + chr7_4:57707355-57707374 Msa1165740:CDS 50.0%
! CCTCTGGCGTTCTTGTTTCA+TGG - chr7_4:57707411-57707430 None:intergenic 50.0%
CCATGAAACAAGAACGCCAG+AGG + chr7_4:57707408-57707427 Msa1165740:CDS 50.0%
ATCACTGCTGCTACTGTCCA+TGG - chr7_4:57707668-57707687 None:intergenic 50.0%
!! GGCCTCCATCTGATTTGTTG+TGG + chr7_4:57708144-57708163 Msa1165740:intron 50.0%
! TGTGGTATAGAGGCGTGGAT+TGG + chr7_4:57708162-57708181 Msa1165740:intron 50.0%
GGGAAGTGATCATCTGCAGA+AGG + chr7_4:57708438-57708457 Msa1165740:CDS 50.0%
GCCTGTTAGGCACGATGTAA+AGG + chr7_4:57708874-57708893 Msa1165740:CDS 50.0%
!! GATGAAGGACAGATGGTGGA+TGG + chr7_4:57709019-57709038 Msa1165740:CDS 50.0%
CGAATGAGCTCCTCTTGAGA+TGG - chr7_4:57709082-57709101 None:intergenic 50.0%
! CTCATTCGGCAAGCTTTTGC+TGG + chr7_4:57709094-57709113 Msa1165740:CDS 50.0%
! CATTCGGCAAGCTTTTGCTG+GGG + chr7_4:57709096-57709115 Msa1165740:CDS 50.0%
AATAGAGGCTTCTCAGGCTC+GGG - chr7_4:57709178-57709197 None:intergenic 50.0%
CCCCAACCAGGAAGTAATAG+AGG - chr7_4:57709193-57709212 None:intergenic 50.0%
TACTTCCTGGTTGGGGTCAA+TGG + chr7_4:57709197-57709216 Msa1165740:CDS 50.0%
! GGGCTTCTTCCCTTTTTCTC+TGG - chr7_4:57709282-57709301 None:intergenic 50.0%
GTACAGAAGACAATGGTGGC+TGG - chr7_4:57710310-57710329 None:intergenic 50.0%
CAGAGTATGCGTATGCCCAT+TGG + chr7_4:57710455-57710474 Msa1165740:CDS 50.0%
! CGGGTTAGATTCAGGTCCAA+TGG - chr7_4:57710474-57710493 None:intergenic 50.0%
! GTAGTTGCCGGGTTAGATTC+AGG - chr7_4:57710482-57710501 None:intergenic 50.0%
GAGGTCCAAATGTAGTTGCC+GGG - chr7_4:57710493-57710512 None:intergenic 50.0%
CTTACTTCAGGCCGAGTAAG+AGG - chr7_4:57710512-57710531 None:intergenic 50.0%
CTCACGATAAACCAGAGCAG+CGG + chr7_4:57710851-57710870 Msa1165740:CDS 50.0%
CTAAACCTAGCGGCGTTGCT+AGG + chr7_4:57705209-57705228 Msa1165740:five_prime_UTR 55.0%
AGCGAAGGTGGAAAGGAAGG+TGG + chr7_4:57706166-57706185 Msa1165740:CDS 55.0%
ACTCGGAATGCATGGGAACC+TGG - chr7_4:57706528-57706547 None:intergenic 55.0%
CTCCTCAGTTATGTCCGCCA+AGG - chr7_4:57706751-57706770 None:intergenic 55.0%
! CTTGGCGGACATAACTGAGG+AGG + chr7_4:57706749-57706768 Msa1165740:intron 55.0%
! TGGCGGATGGAGGACAATAG+CGG - chr7_4:57707016-57707035 None:intergenic 55.0%
TCAGTCCATTGACCCCAACC+AGG - chr7_4:57709205-57709224 None:intergenic 55.0%
GTCTACGGCTCTACGCCATT+TGG + chr7_4:57709959-57709978 Msa1165740:intron 55.0%
AGACAATGGTGGCTGGCAAG+TGG - chr7_4:57710303-57710322 None:intergenic 55.0%
GTGCAGGTGGTGAAGAAACC+AGG + chr7_4:57710790-57710809 Msa1165740:intron 55.0%
! CGCTGCTCTGGTTTATCGTG+AGG - chr7_4:57710853-57710872 None:intergenic 55.0%
GTAGACCTAGCAACGCCGCT+AGG - chr7_4:57705217-57705236 None:intergenic 60.0%
GACGCCAACAACCGCCACAT+CGG + chr7_4:57705309-57705328 Msa1165740:CDS 60.0%
GGCTCCGCAATTTAGCAGCC+TGG - chr7_4:57707250-57707269 None:intergenic 60.0%
ACAAGAACGCCAGAGGGCTG+AGG + chr7_4:57707415-57707434 Msa1165740:CDS 60.0%
ACGGCTCTACGCCATTTGGC+TGG + chr7_4:57709963-57709982 Msa1165740:intron 60.0%
GCTCTACGCCATTTGGCTGG+AGG + chr7_4:57709966-57709985 Msa1165740:intron 60.0%
ACACTCTGTTGCCGCTGCTC+TGG - chr7_4:57710865-57710884 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 57705148 57711364 57705148 ID=Msa1165740;Name=Msa1165740
chr7_4 mRNA 57705148 57711364 57705148 ID=Msa1165740-mRNA-1;Parent=Msa1165740;Name=Msa1165740-mRNA-1;_AED=0.04;_eAED=0.04;_QI=131|1|0.9|1|1|1|10|395|926
chr7_4 exon 57705148 57705566 57705148 ID=Msa1165740-mRNA-1:exon:17493;Parent=Msa1165740-mRNA-1
chr7_4 exon 57705641 57705800 57705641 ID=Msa1165740-mRNA-1:exon:17494;Parent=Msa1165740-mRNA-1
chr7_4 exon 57705946 57706427 57705946 ID=Msa1165740-mRNA-1:exon:17495;Parent=Msa1165740-mRNA-1
chr7_4 exon 57707215 57707436 57707215 ID=Msa1165740-mRNA-1:exon:17496;Parent=Msa1165740-mRNA-1
chr7_4 exon 57707520 57707843 57707520 ID=Msa1165740-mRNA-1:exon:17497;Parent=Msa1165740-mRNA-1
chr7_4 exon 57708172 57708705 57708172 ID=Msa1165740-mRNA-1:exon:17498;Parent=Msa1165740-mRNA-1
chr7_4 exon 57708818 57708895 57708818 ID=Msa1165740-mRNA-1:exon:17499;Parent=Msa1165740-mRNA-1
chr7_4 exon 57708977 57709363 57708977 ID=Msa1165740-mRNA-1:exon:17500;Parent=Msa1165740-mRNA-1
chr7_4 exon 57710395 57710526 57710395 ID=Msa1165740-mRNA-1:exon:17501;Parent=Msa1165740-mRNA-1
chr7_4 exon 57710796 57711364 57710796 ID=Msa1165740-mRNA-1:exon:17502;Parent=Msa1165740-mRNA-1
chr7_4 five_prime_UTR 57705148 57705278 57705148 ID=Msa1165740-mRNA-1:five_prime_utr;Parent=Msa1165740-mRNA-1
chr7_4 CDS 57705279 57705566 57705279 ID=Msa1165740-mRNA-1:cds;Parent=Msa1165740-mRNA-1
chr7_4 CDS 57705641 57705800 57705641 ID=Msa1165740-mRNA-1:cds;Parent=Msa1165740-mRNA-1
chr7_4 CDS 57705946 57706427 57705946 ID=Msa1165740-mRNA-1:cds;Parent=Msa1165740-mRNA-1
chr7_4 CDS 57707215 57707436 57707215 ID=Msa1165740-mRNA-1:cds;Parent=Msa1165740-mRNA-1
chr7_4 CDS 57707520 57707843 57707520 ID=Msa1165740-mRNA-1:cds;Parent=Msa1165740-mRNA-1
chr7_4 CDS 57708172 57708705 57708172 ID=Msa1165740-mRNA-1:cds;Parent=Msa1165740-mRNA-1
chr7_4 CDS 57708818 57708895 57708818 ID=Msa1165740-mRNA-1:cds;Parent=Msa1165740-mRNA-1
chr7_4 CDS 57708977 57709363 57708977 ID=Msa1165740-mRNA-1:cds;Parent=Msa1165740-mRNA-1
chr7_4 CDS 57710395 57710526 57710395 ID=Msa1165740-mRNA-1:cds;Parent=Msa1165740-mRNA-1
chr7_4 CDS 57710796 57710969 57710796 ID=Msa1165740-mRNA-1:cds;Parent=Msa1165740-mRNA-1
chr7_4 three_prime_UTR 57710970 57711364 57710970 ID=Msa1165740-mRNA-1:three_prime_utr;Parent=Msa1165740-mRNA-1
Gene Sequence

>Msa1165740

ATGGCAGAGAAGAAGCGAAATGAAAGAGGCGACGCCAACAACCGCCACATCGGAAAAAAGAAGTCTAAGAAGACTTCCGACAATCAACGGAAGAAAACCGGTCCTCGTTTGCCTTCATCTTTGAAAAAAGAGATCCAACACTTAAACCCTACTCCTGTTGATGTTGATGAAATCGACAGCGATGTTTACGAATACGAAGAAGAACAACCTGAAGAAGAATCTAGAAAGAATAAGCGATACGACCCTGTCTCTGTCAATGATAATAATGACCTTTCTTCTGATTTCGAGGATGAGAATGTACAATCTGATGATGACGACGACGGCTATGATTTTATTGGAAAAAAGAGGAAGAAAATTGACTCTGATGATGATTCTGGGGAGGAAGATGATGAGAGACATGAAAGGATGTTACAACGAATTACCGGTATGCCGAGCAAGCCTTTTGATGGCAATAAGAAGGCGAGGAAGAATGATGTTATTCCGGAGCTATATCTAGAGTCTGAAAATAATCCTAGTCACGATGTTGTGGAAGGTGATGGACGAATTACTATCGAGGACCTCCTTAATCCTCTTCGTGACGATCCTGATCATTCAAGACTCCGGTTAAGAAATCAACAAATTGAGAATCGTTCTAGAACTGTTCATGCACCACTTCCAAAGGCAGATCAAGCGAAGGTGGAAAGGAAGGTGGCGTATGACATATCAAAGAAACAAGTCACAAAGTGGCAACCCCTTATTCAGAGAAATAGGGAGGCTCCTACTAAGTACTTTGATGAAAAGACAGATCTAGGGTTTTCAACTATAGGAGCAATAGCTTCTGAATTTGAACCCAGAACTAAATTTGAGAGGAATATGGCTGCACTAGTTCATCATGACAAAATTATGGAAGCTCATAAAAACGATGGTGGTAGTCTTCTTGACATGAACAAGGTTTCTATAAAGGATGAGAAGGATGGGCATAACCAGGCTGCTAAATTGCGGAGCCTTCTTTTTCGTCATGAGATGAAGGCAAAACATGTTAAAAAGATTAAGTCCAAAACATATCATCGTCTGTTAAAGAAAGTTAGATTGAAGGCAGAGTCTTCTCAGTTGGAAATGGATCCTGAAGCTGCTAATGAATATGCCATGAAACAAGAACGCCAGAGGGCTGAGGAACGCATGACTCTGAGACACAAACATAAAAGTCCATGGCTTCAGCGTAAAATGCAACGTGGTTTAGATAAGCAGGATGAAGGAACTCGTGCTGCCGTGACTGAACATTTTCAAAGACACGAGGAACTGACTAGAAAAAGGAAAACCATGGACAGTAGCAGCAGTGATGATAGCACTTATGAAGATGCCGATGATGAGAATGCTGCTGATTCTGATCCGGATAAGGCAAACAAGATTTTGCGAAAAGCAAAACAAAAGACACTAGAAGTGCTGGAGGAAGATGATGAAATGCCCAAGTCGGGATTGCTATCTTTACCTTTTATGAGGCGTGGATTGGAGAAAAGAAAAGAAGCAACTATTGAAGAAGTCAACCTTACTGTACAAGAATATGAAGATTCCATGAAGAAGCTGGAGGATTCTGATGGCTCAGAAGATCCAAAAGTAGCATCTACCAGTGGCAGAAGAGTATTTGGAATGGCTAAAGCCCAAACAATTGGTGCTGATAATAAGGTGGAATTAGATAAGTTTTACGATAACAGTGATAGCGAGGATGACTTTGAGGCCAAGAAAAGTGGCAACATTGAGAATGAGGGAAGTGATCATCTGCAGAAGGATGTCATCAATGATTCAGTTTTAAATCAAGAGAATATCAATACTCGCAAAGAATCTGTTTTTAAGGTGAATAATTTCCTATTTTCTTGGACTTCTCAGATGTTTGTTTTACTTAATGGTAATGGGTATAACACATTTTATGCATTTCTTGAAACTTGGTCACAGAACTTTGATGAGATTGTAAAAAATCCCGGGCCAAAAACTACATACGAAGTTTCCATATTTGCCTCAGATACATGGAAAAAGGCAAAAAACAAAAATGGTATAGACACAGACATCAAGAAGTCTTCAAAGTTTAATAGGCCTGTTAGGCACGATGTAAAGAGCTCTGAAAAAGATCAATTGGGAGAGGATAGCGATACAGATGATGAAGGACAGATGGTGGATGGAATTCTGACTTCTGCATCTAAACCATCTTATGAACTTCCATCTCAAGAGGAGCTCATTCGGCAAGCTTTTGCTGGGGATGATGTAGAAGATGATTTTGAAAAGGATAAGCAGGAGATCCTCAATGAAGAAAATCCCGAGCCTGAGAAGCCTCTATTACTTCCTGGTTGGGGTCAATGGACTGATATACAGCAAAAGAAAGGTTTACCATCCTGGATGGTCAAAGAACATGAAAGTTCCCAGAGAAAAAGGGAAGAAGCCCTCAAGAAGAGAAAGGATGCTCAGTTAAAAAATGTCATCATCTCTGAGAAATCAAGCAAGAAGGCCGAGAAACTCCAAACAAAAACGGTGCCTTTTCCTTATACTTCCAAAGATGTCTTTCATCAGAGTATGCGTATGCCCATTGGACCTGAATCTAACCCGGCAACTACATTTGGACCTCTTACTCGGCCTGAAGTGGTGAAGAAACCAGGTGTTATTATAAAACCGATAGAATTTGAGGAAGTGAATCCTCACGATAAACCAGAGCAGCGGCAACAGAGTGTTAAGAACAAGAAGTTGAATAGAACCAAAGGCAATGATAGCAAAGCCATAAAAAAGTCGAAGTTGAAGGTCAAGGGAAAAAAGTAA
Protein sequence

>Msa1165740

MAEKKRNERGDANNRHIGKKKSKKTSDNQRKKTGPRLPSSLKKEIQHLNPTPVDVDEIDSDVYEYEEEQPEEESRKNKRYDPVSVNDNNDLSSDFEDENVQSDDDDDGYDFIGKKRKKIDSDDDSGEEDDERHERMLQRITGMPSKPFDGNKKARKNDVIPELYLESENNPSHDVVEGDGRITIEDLLNPLRDDPDHSRLRLRNQQIENRSRTVHAPLPKADQAKVERKVAYDISKKQVTKWQPLIQRNREAPTKYFDEKTDLGFSTIGAIASEFEPRTKFERNMAALVHHDKIMEAHKNDGGSLLDMNKVSIKDEKDGHNQAAKLRSLLFRHEMKAKHVKKIKSKTYHRLLKKVRLKAESSQLEMDPEAANEYAMKQERQRAEERMTLRHKHKSPWLQRKMQRGLDKQDEGTRAAVTEHFQRHEELTRKRKTMDSSSSDDSTYEDADDENAADSDPDKANKILRKAKQKTLEVLEEDDEMPKSGLLSLPFMRRGLEKRKEATIEEVNLTVQEYEDSMKKLEDSDGSEDPKVASTSGRRVFGMAKAQTIGADNKVELDKFYDNSDSEDDFEAKKSGNIENEGSDHLQKDVINDSVLNQENINTRKESVFKVNNFLFSWTSQMFVLLNGNGYNTFYAFLETWSQNFDEIVKNPGPKTTYEVSIFASDTWKKAKNKNGIDTDIKKSSKFNRPVRHDVKSSEKDQLGEDSDTDDEGQMVDGILTSASKPSYELPSQEELIRQAFAGDDVEDDFEKDKQEILNEENPEPEKPLLLPGWGQWTDIQQKKGLPSWMVKEHESSQRKREEALKKRKDAQLKNVIISEKSSKKAEKLQTKTVPFPYTSKDVFHQSMRMPIGPESNPATTFGPLTRPEVVKKPGVIIKPIEFEEVNPHDKPEQRQQSVKNKKLNRTKGNDSKAIKKSKLKVKGKK*