Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198290 | XP_013462991.1 | 95.442 | 373 | 16 | 1 | 1 | 373 | 1 | 372 | 0.0 | 697 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198290 | sp|Q94K71|CBBY_ARATH | 31.183 | 186 | 113 | 6 | 47 | 223 | 44 | 223 | 1.52e-17 | 85.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198290 | A0A072V5X9 | 95.442 | 373 | 16 | 1 | 1 | 373 | 1 | 372 | 0.0 | 697 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014410 | Msa0198290 | 0.812975 | 3.233703e-51 | -8.615850e-47 |
| Msa0043940 | Msa0198290 | 0.806179 | 9.325515e-50 | -8.615850e-47 |
| Msa0050770 | Msa0198290 | 0.806806 | 6.879697e-50 | -8.615850e-47 |
| Msa0064550 | Msa0198290 | 0.823306 | 1.487023e-53 | -8.615850e-47 |
| Msa0092710 | Msa0198290 | 0.804642 | 1.958719e-49 | -8.615850e-47 |
| Msa0109490 | Msa0198290 | 0.808329 | 3.268005e-50 | -8.615850e-47 |
| Msa0154270 | Msa0198290 | 0.801863 | 7.365480e-49 | -8.615850e-47 |
| Msa0198290 | Msa0199740 | 0.804981 | 1.663906e-49 | -8.615850e-47 |
| Msa0198290 | Msa0240640 | 0.820754 | 5.803255e-53 | -8.615850e-47 |
| Msa0198290 | Msa0242290 | 0.801138 | 1.037015e-48 | -8.615850e-47 |
| Msa0198290 | Msa0298830 | 0.827586 | 1.441901e-54 | -8.615850e-47 |
| Msa0198290 | Msa0318250 | 0.802705 | 4.943134e-49 | -8.615850e-47 |
| Msa0198290 | Msa0318270 | 0.872539 | 2.942316e-67 | -8.615850e-47 |
| Msa0198290 | Msa0318310 | 0.869626 | 2.689099e-66 | -8.615850e-47 |
| Msa0198290 | Msa0344680 | 0.818258 | 2.153327e-52 | -8.615850e-47 |
| Msa0198290 | Msa0367370 | 0.803255 | 3.804690e-49 | -8.615850e-47 |
| Msa0198290 | Msa0373220 | 0.810467 | 1.136017e-50 | -8.615850e-47 |
| Msa0198290 | Msa0380650 | 0.819434 | 1.163730e-52 | -8.615850e-47 |
| Msa0198290 | Msa0392050 | 0.816683 | 4.874242e-52 | -8.615850e-47 |
| Msa0198290 | Msa0392540 | 0.813977 | 1.947156e-51 | -8.615850e-47 |
| Msa0198290 | Msa0430290 | 0.819134 | 1.361863e-52 | -8.615850e-47 |
| Msa0198290 | Msa0440310 | 0.822735 | 2.020957e-53 | -8.615850e-47 |
| Msa0198290 | Msa0445360 | 0.808082 | 3.688330e-50 | -8.615850e-47 |
| Msa0198290 | Msa0448120 | 0.806866 | 6.681327e-50 | -8.615850e-47 |
| Msa0198290 | Msa0462590 | 0.804108 | 2.530685e-49 | -8.615850e-47 |
| Msa0198290 | Msa0468020 | 0.813102 | 3.033341e-51 | -8.615850e-47 |
| Msa0198290 | Msa0469950 | 0.815858 | 7.453967e-52 | -8.615850e-47 |
| Msa0198290 | Msa0487490 | 0.828642 | 8.024898e-55 | -8.615850e-47 |
| Msa0198290 | Msa0525270 | 0.813565 | 2.400191e-51 | -8.615850e-47 |
| Msa0198290 | Msa0583740 | 0.815711 | 8.037686e-52 | -8.615850e-47 |
| Msa0198290 | Msa0605250 | 0.836865 | 7.284501e-57 | -8.615850e-47 |
| Msa0198290 | Msa0649310 | 0.834193 | 3.453489e-56 | -8.615850e-47 |
| Msa0198290 | Msa0649380 | 0.821283 | 4.383998e-53 | -8.615850e-47 |
| Msa0198290 | Msa0649420 | 0.823559 | 1.297794e-53 | -8.615850e-47 |
| Msa0198290 | Msa0761640 | 0.809938 | 1.477636e-50 | -8.615850e-47 |
| Msa0198290 | Msa0780140 | 0.803681 | 3.104167e-49 | -8.615850e-47 |
| Msa0198290 | Msa0848760 | 0.801842 | 7.439743e-49 | -8.615850e-47 |
| Msa0198290 | Msa0863250 | 0.801152 | 1.030570e-48 | -8.615850e-47 |
| Msa0198290 | Msa0882700 | 0.809396 | 1.931554e-50 | -8.615850e-47 |
| Msa0198290 | Msa0944690 | 0.828461 | 8.874262e-55 | -8.615850e-47 |
| Msa0198290 | Msa1004210 | 0.814108 | 1.822092e-51 | -8.615850e-47 |
| Msa0198290 | Msa1004260 | 0.800045 | 1.732722e-48 | -8.615850e-47 |
| Msa0198290 | Msa1046610 | 0.808900 | 2.467130e-50 | -8.615850e-47 |
| Msa0198290 | Msa1144730 | 0.817066 | 3.998449e-52 | -8.615850e-47 |
| Msa0198290 | Msa1177240 | 0.822764 | 1.989180e-53 | -8.615850e-47 |
| Msa0198290 | Msa1408710 | 0.800740 | 1.250664e-48 | -8.615850e-47 |
| Msa0198290 | Msa1439120 | 0.813593 | 2.366012e-51 | -8.615850e-47 |
| Msa0198290 | Msa1455660 | 0.810128 | 1.344785e-50 | -8.615850e-47 |
| Msa0198290 | Msa1466350 | 0.801534 | 8.606009e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198290 | MtrunA17_Chr2g0291931 | 95.442 | 373 | 16 | 1 | 1 | 373 | 1 | 372 | 0.0 | 697 |
| Msa0198290 | MtrunA17_Chr3g0116461 | 34.437 | 151 | 90 | 5 | 76 | 223 | 83 | 227 | 3.19e-19 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198290 | AT5G45170.1 | 56.011 | 366 | 147 | 4 | 11 | 364 | 5 | 368 | 3.57e-135 | 390 |
| Msa0198290 | AT5G45170.2 | 46.765 | 340 | 158 | 6 | 11 | 335 | 5 | 336 | 3.95e-92 | 280 |
| Msa0198290 | AT3G48420.1 | 31.183 | 186 | 113 | 6 | 47 | 223 | 44 | 223 | 1.54e-18 | 85.9 |
Find 120 sgRNAs with CRISPR-Local
Find 475 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCATTTCGTGTTGATATT+TGG | 0.223031 | 2_1:+16882200 | Msa0198290:three_prime_UTR |
| TCAGGAAAGGTGATTGCTTC+TGG | 0.261931 | 2_1:+16880645 | Msa0198290:CDS |
| AATCCTTTGGTTGTTTCTTC+TGG | 0.279262 | 2_1:-16881915 | None:intergenic |
| GGCGCGGCGCGGAGATTTGC+CGG | 0.280786 | 2_1:-16875142 | None:intergenic |
| TGCAACTGTGTCCTTGTTGC+AGG | 0.329218 | 2_1:+16881586 | Msa0198290:CDS |
| AAAATTACCATTCAATCCTT+TGG | 0.339779 | 2_1:-16881928 | None:intergenic |
| ACCTGCTCTTGTGGCTTCCT+TGG | 0.351095 | 2_1:-16880685 | None:intergenic |
| GATAGGTAGCCCTGCATATT+CGG | 0.364860 | 2_1:-16881563 | None:intergenic |
| GAGGCTGGGCAAAGTTTATA+TGG | 0.382263 | 2_1:+16880612 | Msa0198290:CDS |
| GGAAGCCAGACTGGAGTAGC+TGG | 0.394652 | 2_1:+16881607 | Msa0198290:CDS |
| GAAGAGTCCCTTCTCATTTG+TGG | 0.397140 | 2_1:-16876426 | None:intergenic |
| AAAGGTGATTGCTTCTGGTT+TGG | 0.402048 | 2_1:+16880650 | Msa0198290:CDS |
| TGGCGATGATCGAAGCAAAA+AGG | 0.407324 | 2_1:+16880569 | Msa0198290:CDS |
| ATTGCCACTGTGGATGGGTT+TGG | 0.410611 | 2_1:+16881853 | Msa0198290:CDS |
| TGGAGTAGCTGGAGCTGAAC+GGG | 0.412213 | 2_1:+16881618 | Msa0198290:CDS |
| TGCATACAATGAAGGAATTC+CGG | 0.412496 | 2_1:+16879913 | Msa0198290:CDS |
| CATTAACAAATCCACGATAT+AGG | 0.413902 | 2_1:+16882228 | Msa0198290:three_prime_UTR |
| CTTGTTGCAGGAAGCCAGAC+TGG | 0.414254 | 2_1:+16881598 | Msa0198290:CDS |
| TTAGCAATTGCCACTGTGGA+TGG | 0.417463 | 2_1:+16881847 | Msa0198290:CDS |
| AAATATCAACACGAAATGAT+AGG | 0.420491 | 2_1:-16882198 | None:intergenic |
| TGTGATGCTGTTATCTGAAC+AGG | 0.420730 | 2_1:+16882409 | Msa0198290:three_prime_UTR |
| ATATTGGCAGGAAAAGGCTT+TGG | 0.427340 | 2_1:+16878099 | Msa0198290:intron |
| AATCGAACAGCGTTCAATAA+AGG | 0.429036 | 2_1:+16875401 | Msa0198290:CDS |
| AAGAGTCCCTTCTCATTTGT+GGG | 0.436076 | 2_1:-16876425 | None:intergenic |
| TATTGGCAGGAAAAGGCTTT+GGG | 0.439363 | 2_1:+16878100 | Msa0198290:intron |
| TTATATGGCCAACTTGTCTC+AGG | 0.445619 | 2_1:+16880627 | Msa0198290:CDS |
| TCTTCAGAGACAGTGTTTGC+TGG | 0.447988 | 2_1:+16882165 | Msa0198290:three_prime_UTR |
| TCATTTGTGGGTAGTGATGA+AGG | 0.455267 | 2_1:-16876413 | None:intergenic |
| AAAGCTTTAACTGCAGTCGC+TGG | 0.455938 | 2_1:+16882368 | Msa0198290:three_prime_UTR |
| CTAGAAATGAAGTTTAAGAT+AGG | 0.461407 | 2_1:+16882140 | Msa0198290:three_prime_UTR |
| ATTGATGATGCATACAATGA+AGG | 0.462406 | 2_1:+16879905 | Msa0198290:CDS |
| CAGCTCCAGCTACTCCAGTC+TGG | 0.463683 | 2_1:-16881612 | None:intergenic |
| AACTTACTCGATTAAAATAC+AGG | 0.466271 | 2_1:-16876259 | None:intergenic |
| ATTGTGGGGATTGAGGAGGC+TGG | 0.483023 | 2_1:+16880597 | Msa0198290:CDS |
| TCTAAACAGAAGTTGCTTCA+CGG | 0.483164 | 2_1:-16882572 | None:intergenic |
| CTTGTTGATGCGTATCGTGT+AGG | 0.485197 | 2_1:+16875377 | Msa0198290:CDS |
| GAAACAACCAAAGGATTGAA+TGG | 0.485329 | 2_1:+16881921 | Msa0198290:exon |
| GGTGATGATTGTGGGGATTG+AGG | 0.486082 | 2_1:+16880590 | Msa0198290:CDS |
| GCCGTTCTTCTCGAAGTCGA+CGG | 0.487343 | 2_1:+16875222 | Msa0198290:CDS |
| TTGTTGATGCGTATCGTGTA+GGG | 0.490848 | 2_1:+16875378 | Msa0198290:CDS |
| ATTGCAGCATTTGAGAAACT+TGG | 0.494805 | 2_1:+16875713 | Msa0198290:intron |
| CCGTTCTTCTCGAAGTCGAC+GGG | 0.496661 | 2_1:+16875223 | Msa0198290:CDS |
| ATCCACAGTGGCAATTGCTA+AGG | 0.496691 | 2_1:-16881845 | None:intergenic |
| CGATGAGAAACGGTTACGTT+GGG | 0.496965 | 2_1:-16875099 | None:intergenic |
| GCCAAGGAAGCCACAAGAGC+AGG | 0.498725 | 2_1:+16880684 | Msa0198290:CDS |
| ATTTGAAGCTGGCAAACAAA+AGG | 0.504477 | 2_1:+16882108 | Msa0198290:three_prime_UTR |
| TAGCAATTGCCACTGTGGAT+GGG | 0.505041 | 2_1:+16881848 | Msa0198290:CDS |
| CATGCGGGAGCCGAATATGC+AGG | 0.506146 | 2_1:+16881553 | Msa0198290:CDS |
| GCCACTGTGGATGGGTTTGG+AGG | 0.506475 | 2_1:+16881856 | Msa0198290:CDS |
| GCGCGGCGCGGAGATTTGCC+GGG | 0.511155 | 2_1:-16875141 | None:intergenic |
| TCGATACCAGCTTATCCAAA+AGG | 0.511673 | 2_1:+16880872 | Msa0198290:CDS |
| GCATGCCATGTGTTGTTCTA+CGG | 0.512070 | 2_1:+16881644 | Msa0198290:CDS |
| GACTGTGTTATTGTTGCCAT+TGG | 0.515762 | 2_1:-16874997 | None:intergenic |
| TTGACAGCCTACAGTAAAAG+TGG | 0.516246 | 2_1:+16879944 | Msa0198290:CDS |
| GATGTGGCTGTCGTCGTCAT+CGG | 0.517315 | 2_1:-16875184 | None:intergenic |
| ACTTGCTGAGGATTTGAAGC+TGG | 0.518502 | 2_1:+16882097 | Msa0198290:three_prime_UTR |
| AGGACCATAATAGAAAAGCT+TGG | 0.521574 | 2_1:+16880549 | Msa0198290:intron |
| GTAGCTGGAGCTGAACGGGC+GGG | 0.528045 | 2_1:+16881622 | Msa0198290:CDS |
| ATAACTCACAACATTAAGAA+TGG | 0.528983 | 2_1:-16882333 | None:intergenic |
| TAGTTGAACATGAAGTTGCT+AGG | 0.529333 | 2_1:-16875020 | None:intergenic |
| ACAAGGACACAGTTGCAGAT+AGG | 0.535437 | 2_1:-16881580 | None:intergenic |
| TAGTATCAGTTTGTTACCAA+TGG | 0.535698 | 2_1:+16874981 | Msa0198290:exon |
| CGGAGAAAACTGCGATGGCG+CGG | 0.538684 | 2_1:-16875158 | None:intergenic |
| TCCACAGTGGCAATTGCTAA+GGG | 0.539116 | 2_1:-16881844 | None:intergenic |
| TCACCTTTCCTGAGACAAGT+TGG | 0.540422 | 2_1:-16880635 | None:intergenic |
| CTGGCACAGGATAGTAAACA+AGG | 0.544597 | 2_1:-16882023 | None:intergenic |
| AGCTTCAAATCCTCAGCAAG+TGG | 0.546975 | 2_1:-16882095 | None:intergenic |
| GTCGAATACCAAAGCTCCAC+GGG | 0.549386 | 2_1:-16882503 | None:intergenic |
| CTTAAAAGATCTGAATAGAC+AGG | 0.549569 | 2_1:-16875761 | None:intergenic |
| GCTGTCGTCGTCATCGGCGA+CGG | 0.551621 | 2_1:-16875178 | None:intergenic |
| ATCTTAAACTTCATTTCTAG+AGG | 0.552203 | 2_1:-16882137 | None:intergenic |
| CAGAAGAAGCGCTGGAGATG+AGG | 0.553446 | 2_1:+16876223 | Msa0198290:intron |
| TCGATGAGAAACGGTTACGT+TGG | 0.558435 | 2_1:-16875100 | None:intergenic |
| CATGTGTTGTTCTACGGAGC+AGG | 0.563360 | 2_1:+16881650 | Msa0198290:CDS |
| AAGCTTTAACTGCAGTCGCT+GGG | 0.565168 | 2_1:+16882369 | Msa0198290:three_prime_UTR |
| CAAATCCACGATATAGGATG+AGG | 0.566067 | 2_1:+16882234 | Msa0198290:three_prime_UTR |
| AGAGGGAAATCGATGAGAAA+CGG | 0.567581 | 2_1:-16875109 | None:intergenic |
| TTGGACTTGATTGTGCGAGT+TGG | 0.568648 | 2_1:+16875732 | Msa0198290:CDS |
| CCGATACAAACCTCTGGCAC+AGG | 0.571298 | 2_1:-16882036 | None:intergenic |
| CGAGGTCATTCGACGTGATG+TGG | 0.573213 | 2_1:-16875200 | None:intergenic |
| TGTTTACTATCCTGTGCCAG+AGG | 0.575070 | 2_1:+16882026 | Msa0198290:three_prime_UTR |
| AGTTGAACATGAAGTTGCTA+GGG | 0.579652 | 2_1:-16875019 | None:intergenic |
| ACAAAGAATAGCAAAGGAGG+TGG | 0.579729 | 2_1:+16880822 | Msa0198290:CDS |
| ATCACTACCCACAAATGAGA+AGG | 0.579842 | 2_1:+16876418 | Msa0198290:CDS |
| GTTTGCCTCATCCTATATCG+TGG | 0.580688 | 2_1:-16882239 | None:intergenic |
| CCTGTGCCAGAGGTTTGTAT+CGG | 0.580964 | 2_1:+16882036 | Msa0198290:three_prime_UTR |
| AAAGTGGTGATAATATTGCC+AGG | 0.582996 | 2_1:+16879960 | Msa0198290:CDS |
| GGGTAACCGATACAAACCTC+TGG | 0.584904 | 2_1:-16882042 | None:intergenic |
| CTGGAGTAGCTGGAGCTGAA+CGG | 0.588173 | 2_1:+16881617 | Msa0198290:CDS |
| CAGTCTGGCTTCCTGCAACA+AGG | 0.591529 | 2_1:-16881597 | None:intergenic |
| ATTGTGGCTGCACTACATGC+GGG | 0.591845 | 2_1:+16881538 | Msa0198290:CDS |
| TTGTGGGGATTGAGGAGGCT+GGG | 0.598027 | 2_1:+16880598 | Msa0198290:CDS |
| GATTGTGGCTGCACTACATG+CGG | 0.601362 | 2_1:+16881537 | Msa0198290:CDS |
| TTTGGATGAAGAACTTGCCA+AGG | 0.603749 | 2_1:+16880668 | Msa0198290:CDS |
| CCCCTTAGCAATTGCCACTG+TGG | 0.604599 | 2_1:+16881843 | Msa0198290:CDS |
| AGTAGCTGGAGCTGAACGGG+CGG | 0.609376 | 2_1:+16881621 | Msa0198290:CDS |
| AACAAACTATCCACTTGCTG+AGG | 0.616071 | 2_1:+16882085 | Msa0198290:three_prime_UTR |
| TGGCCAACTTGTCTCAGGAA+AGG | 0.616864 | 2_1:+16880632 | Msa0198290:CDS |
| GAAGTACATACCTGCTCTTG+TGG | 0.622583 | 2_1:-16880694 | None:intergenic |
| TGAGAGACAAAGAATAGCAA+AGG | 0.632363 | 2_1:+16880816 | Msa0198290:CDS |
| AGTCGAATACCAAAGCTCCA+CGG | 0.634862 | 2_1:-16882504 | None:intergenic |
| CTGCTCCGTAGAACAACACA+TGG | 0.637561 | 2_1:-16881649 | None:intergenic |
| TAGGCTGTCAATATTACCAC+CGG | 0.637767 | 2_1:-16879932 | None:intergenic |
| GATGATTGTGGGGATTGAGG+AGG | 0.640224 | 2_1:+16880593 | Msa0198290:CDS |
| TCTTTAACATACAGATCGGG+TGG | 0.640330 | 2_1:+16876390 | Msa0198290:intron |
| GGCGACGGAGAAAACTGCGA+TGG | 0.642174 | 2_1:-16875163 | None:intergenic |
| TCACTACCCACAAATGAGAA+GGG | 0.642676 | 2_1:+16876419 | Msa0198290:CDS |
| GAGACAAAGAATAGCAAAGG+AGG | 0.650210 | 2_1:+16880819 | Msa0198290:CDS |
| ATAACTCACTGTTCAACACC+AGG | 0.655682 | 2_1:-16878157 | None:intergenic |
| AAAAGTCTATCTTTACGACC+TGG | 0.658689 | 2_1:+16878139 | Msa0198290:CDS |
| AAAACTGCGATGGCGCGGCG+CGG | 0.661882 | 2_1:-16875153 | None:intergenic |
| ATGCGGGAGCCGAATATGCA+GGG | 0.664421 | 2_1:+16881554 | Msa0198290:CDS |
| CCCGTCGACTTCGAGAAGAA+CGG | 0.669716 | 2_1:-16875223 | None:intergenic |
| ATGCCAGAAGAAACAACCAA+AGG | 0.672590 | 2_1:+16881912 | Msa0198290:CDS |
| CCACAGTGGCAATTGCTAAG+GGG | 0.680461 | 2_1:-16881843 | None:intergenic |
| GTCCAGTCTAGAGAAGATTG+TGG | 0.689857 | 2_1:+16881522 | Msa0198290:intron |
| TGGCACAGGATAGTAAACAA+GGG | 0.717951 | 2_1:-16882022 | None:intergenic |
| ATACAATGAAGGAATTCCGG+TGG | 0.719398 | 2_1:+16879916 | Msa0198290:CDS |
| ACCTCCAAACCCATCCACAG+TGG | 0.757484 | 2_1:-16881857 | None:intergenic |
| CGACTTCGAGAAGAACGGCG+AGG | 0.757538 | 2_1:-16875218 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTTATTTTTTTTAA+AGG | - | chr2_1:16879454-16879473 | None:intergenic | 0.0% |
| !! | TAAAAAAAATAAAAAAATAT+TGG | + | chr2_1:16879455-16879474 | Msa0198290:intron | 0.0% |
| !!! | TTTATTTCAAAAGTTATTTT+AGG | - | chr2_1:16877760-16877779 | None:intergenic | 10.0% |
| !!! | TAAAATAACTTTTGAAATAA+AGG | + | chr2_1:16877759-16877778 | Msa0198290:intron | 10.0% |
| !!! | TTTTTTTTTTTTGAGAAAAT+GGG | - | chr2_1:16879376-16879395 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTGAGAAAA+TGG | - | chr2_1:16879377-16879396 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTTTTAAAGGTT+GGG | - | chr2_1:16879449-16879468 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTTTTTAAAGGT+TGG | - | chr2_1:16879450-16879469 | None:intergenic | 10.0% |
| !!! | TTTTTGTTTGTTGATTTATT+AGG | + | chr2_1:16875351-16875370 | Msa0198290:intron | 15.0% |
| !!! | TTTTGTTTGTTGATTTATTA+GGG | + | chr2_1:16875352-16875371 | Msa0198290:intron | 15.0% |
| !! | AAAAATAGGTAATATTCATT+GGG | - | chr2_1:16876733-16876752 | None:intergenic | 15.0% |
| !! | AATGCATATATTTCAAAAAT+AGG | - | chr2_1:16876747-16876766 | None:intergenic | 15.0% |
| !!! | ATTATGAAATACAACTATTT+TGG | - | chr2_1:16877176-16877195 | None:intergenic | 15.0% |
| !! | ATATTTATTCCAAATTCATT+TGG | - | chr2_1:16877256-16877275 | None:intergenic | 15.0% |
| !! | AAAATTTACCAATTCTTAAA+GGG | - | chr2_1:16877623-16877642 | None:intergenic | 15.0% |
| !!! | TATACTTTTTAGTTAAAGTT+AGG | + | chr2_1:16878480-16878499 | Msa0198290:intron | 15.0% |
| !!! | ATACTTTTTAGTTAAAGTTA+GGG | + | chr2_1:16878481-16878500 | Msa0198290:intron | 15.0% |
| !! | TATCATATCAAAGAATAAAA+AGG | - | chr2_1:16878728-16878747 | None:intergenic | 15.0% |
| !! | GTTTCTTAATAAAATTCAAA+CGG | - | chr2_1:16879209-16879228 | None:intergenic | 15.0% |
| !! | TCCAAAAAAAAAAAAAAAAG+AGG | + | chr2_1:16879275-16879294 | Msa0198290:intron | 15.0% |
| !!! | TCCTCTTTTTTTTTTTTTTT+TGG | - | chr2_1:16879279-16879298 | None:intergenic | 15.0% |
| !! | CTCAAAAAAAAAAAAAAAAG+AGG | + | chr2_1:16879381-16879400 | Msa0198290:intron | 15.0% |
| !! | TATAAAAACATCAATATTTG+AGG | + | chr2_1:16880395-16880414 | Msa0198290:intron | 15.0% |
| !! | ATAAAAACATCAATATTTGA+GGG | + | chr2_1:16880396-16880415 | Msa0198290:intron | 15.0% |
| !!! | AAATTTAAAATCATATAGGA+AGG | - | chr2_1:16881232-16881251 | None:intergenic | 15.0% |
| !!! | TTCTGATTTTTTTTTTTAAG+TGG | + | chr2_1:16881764-16881783 | Msa0198290:intron | 15.0% |
| !! | TTACTGTTCAATTTATATGA+TGG | + | chr2_1:16875450-16875469 | Msa0198290:intron | 20.0% |
| !! | TTCAATGTAATTAAATGTGT+CGG | + | chr2_1:16875523-16875542 | Msa0198290:intron | 20.0% |
| !!! | GGTGTTTTAATATTCTTTTT+TGG | + | chr2_1:16875783-16875802 | Msa0198290:intron | 20.0% |
| !!! | AATTTTATTGAAGCCTTATT+TGG | + | chr2_1:16875904-16875923 | Msa0198290:intron | 20.0% |
| !!! | TGTATATTTTAAAGTGGATT+TGG | - | chr2_1:16876009-16876028 | None:intergenic | 20.0% |
| !!! | TTAGGTCTATTGATATTTTT+TGG | + | chr2_1:16876314-16876333 | Msa0198290:intron | 20.0% |
| !!! | TGATTAATGTGATTTTTCTT+TGG | + | chr2_1:16876504-16876523 | Msa0198290:intron | 20.0% |
| !! | TCTCAATTTCTTAAAAGAAA+TGG | + | chr2_1:16876673-16876692 | Msa0198290:intron | 20.0% |
| !! | CAAAAATAGGTAATATTCAT+TGG | - | chr2_1:16876734-16876753 | None:intergenic | 20.0% |
| !!! | TATAGTTTTGGAATTTGTAA+GGG | - | chr2_1:16876774-16876793 | None:intergenic | 20.0% |
| !!! | TGCCATTTCAAATATTTATT+CGG | + | chr2_1:16876819-16876838 | Msa0198290:intron | 20.0% |
| !! | TACCGAATAAATATTTGAAA+TGG | - | chr2_1:16876824-16876843 | None:intergenic | 20.0% |
| !!! | GAGATTTTAATAAATTGCAT+GGG | - | chr2_1:16877578-16877597 | None:intergenic | 20.0% |
| !!! | AGAGATTTTAATAAATTGCA+TGG | - | chr2_1:16877579-16877598 | None:intergenic | 20.0% |
| !! | GAAAATTTACCAATTCTTAA+AGG | - | chr2_1:16877624-16877643 | None:intergenic | 20.0% |
| !!! | AAATGTGGATTAGTTTATTT+TGG | + | chr2_1:16877707-16877726 | Msa0198290:intron | 20.0% |
| !!! | AATGTGGATTAGTTTATTTT+GGG | + | chr2_1:16877708-16877727 | Msa0198290:intron | 20.0% |
| !!! | TAAGAAAATACAATGTTTTG+GGG | - | chr2_1:16877792-16877811 | None:intergenic | 20.0% |
| !!! | GTAAGAAAATACAATGTTTT+GGG | - | chr2_1:16877793-16877812 | None:intergenic | 20.0% |
| !!! | TGTAAGAAAATACAATGTTT+TGG | - | chr2_1:16877794-16877813 | None:intergenic | 20.0% |
| !! | TTATATCTCAATAACCTAAA+AGG | + | chr2_1:16877961-16877980 | Msa0198290:intron | 20.0% |
| !! | CAAGGTAAAATAAGTATAAT+AGG | + | chr2_1:16878359-16878378 | Msa0198290:intron | 20.0% |
| !! | AAGTATAATAGGTCATTAAT+AGG | + | chr2_1:16878370-16878389 | Msa0198290:intron | 20.0% |
| !!! | TACTTTTTAGTTAAAGTTAG+GGG | + | chr2_1:16878482-16878501 | Msa0198290:intron | 20.0% |
| !! | TATTATTCACTAACTAATGT+GGG | - | chr2_1:16878835-16878854 | None:intergenic | 20.0% |
| !! | ATATTATTCACTAACTAATG+TGG | - | chr2_1:16878836-16878855 | None:intergenic | 20.0% |
| !!! | TTATCAAATAATCATTTTGC+TGG | + | chr2_1:16878890-16878909 | Msa0198290:intron | 20.0% |
| !!! | TTTCTAAAAAAACAAAGGTA+CGG | + | chr2_1:16879045-16879064 | Msa0198290:intron | 20.0% |
| !! | AATTATATTGCTCAAATGAA+AGG | + | chr2_1:16879121-16879140 | Msa0198290:intron | 20.0% |
| !! | ATGCTATTAATTCTCATAAA+AGG | + | chr2_1:16879242-16879261 | Msa0198290:intron | 20.0% |
| !! | TGCTATTAATTCTCATAAAA+GGG | + | chr2_1:16879243-16879262 | Msa0198290:intron | 20.0% |
| !! | AGAGAATTAATACACATAAT+TGG | - | chr2_1:16879771-16879790 | None:intergenic | 20.0% |
| !! | GTGTATTAATTCTCTTAAAA+AGG | + | chr2_1:16879776-16879795 | Msa0198290:intron | 20.0% |
| !! | TAAAAACATCAATATTTGAG+GGG | + | chr2_1:16880397-16880416 | Msa0198290:intron | 20.0% |
| !! | TATTATGGTCCTAAAAATTA+TGG | - | chr2_1:16880541-16880560 | None:intergenic | 20.0% |
| !!! | AATCTTAAAGAATCTTTTAG+AGG | + | chr2_1:16881128-16881147 | Msa0198290:intron | 20.0% |
| !! | CAAAGAAAGATAATTCAATA+TGG | - | chr2_1:16881319-16881338 | None:intergenic | 20.0% |
| !! | TCAATTTATATGATGGAAAC+CGG | + | chr2_1:16875457-16875476 | Msa0198290:intron | 25.0% |
| ! | ATAGTTTCCTCAACTATTAT+CGG | - | chr2_1:16875500-16875519 | None:intergenic | 25.0% |
| !!! | TTTGTGTTTTTTTGTGTTCA+TGG | + | chr2_1:16875651-16875670 | Msa0198290:intron | 25.0% |
| ! | CATTAATTAACATGATCTCA+TGG | - | chr2_1:16875879-16875898 | None:intergenic | 25.0% |
| !! | AAACATCTTTAGTACTGAAA+TGG | + | chr2_1:16876136-16876155 | Msa0198290:intron | 25.0% |
| ! | AACTTACTCGATTAAAATAC+AGG | - | chr2_1:16876262-16876281 | None:intergenic | 25.0% |
| ! | ATTGTCTTTAACATACAGAT+CGG | + | chr2_1:16876386-16876405 | Msa0198290:intron | 25.0% |
| ! | GATATTTCGTTATAAAGTGA+AGG | - | chr2_1:16876593-16876612 | None:intergenic | 25.0% |
| ! | TTATAACGAAATATCTGTTG+TGG | + | chr2_1:16876598-16876617 | Msa0198290:intron | 25.0% |
| ! | CATTTATACACCAAAACTAT+AGG | - | chr2_1:16876710-16876729 | None:intergenic | 25.0% |
| !!! | CTATAGTTTTGGAATTTGTA+AGG | - | chr2_1:16876775-16876794 | None:intergenic | 25.0% |
| ! | CAAATTCCAAAACTATAGTT+AGG | + | chr2_1:16876777-16876796 | Msa0198290:intron | 25.0% |
| ! | ATTTGCATAGGAAGATTAAA+CGG | - | chr2_1:16877009-16877028 | None:intergenic | 25.0% |
| ! | TTTCCATGAAAAATTTGCAT+AGG | - | chr2_1:16877021-16877040 | None:intergenic | 25.0% |
| !!! | AACTCCATATTTTTTAGATG+TGG | + | chr2_1:16877224-16877243 | Msa0198290:intron | 25.0% |
| !!! | ACTCCATATTTTTTAGATGT+GGG | + | chr2_1:16877225-16877244 | Msa0198290:intron | 25.0% |
| ! | AACGACTTATTCATGATTAT+AGG | - | chr2_1:16877282-16877301 | None:intergenic | 25.0% |
| !!! | TTTTGATTTTGGATTCTTGT+AGG | + | chr2_1:16877372-16877391 | Msa0198290:intron | 25.0% |
| ! | TAAGAAACTATTCCTCAAAT+AGG | - | chr2_1:16877669-16877688 | None:intergenic | 25.0% |
| !!! | ATTTTTGTTTATGACAGAGT+CGG | - | chr2_1:16877879-16877898 | None:intergenic | 25.0% |
| ! | TATGTGATGAAGAGTTATAT+AGG | - | chr2_1:16878082-16878101 | None:intergenic | 25.0% |
| ! | TATAACTCTTCATCACATAT+TGG | + | chr2_1:16878083-16878102 | Msa0198290:intron | 25.0% |
| !! | AAAAAGTATAGCTCCTTTAA+GGG | - | chr2_1:16878470-16878489 | None:intergenic | 25.0% |
| !! | TAAAAAGTATAGCTCCTTTA+AGG | - | chr2_1:16878471-16878490 | None:intergenic | 25.0% |
| !! | TTACATAAGTTTTCCATCAA+AGG | - | chr2_1:16878627-16878646 | None:intergenic | 25.0% |
| ! | ATCATAATCAACACTATCTT+AGG | - | chr2_1:16878678-16878697 | None:intergenic | 25.0% |
| ! | TATGATAGCTATTCTAACTA+TGG | - | chr2_1:16878755-16878774 | None:intergenic | 25.0% |
| ! | ATTATTCACTAACTAATGTG+GGG | - | chr2_1:16878834-16878853 | None:intergenic | 25.0% |
| !! | ATTTGATAACCACTATGTAA+AGG | - | chr2_1:16878879-16878898 | None:intergenic | 25.0% |
| !! | GAGTTTATTTCACAATTTTG+TGG | + | chr2_1:16878912-16878931 | Msa0198290:intron | 25.0% |
| !!! | GTTAGTTGAGATTTTTTTCT+AGG | + | chr2_1:16878950-16878969 | Msa0198290:intron | 25.0% |
| !! | TTCTAAAAAAACAAAGGTAC+GGG | + | chr2_1:16879046-16879065 | Msa0198290:intron | 25.0% |
| !! | AAAAAAATATTGGTGCTTCA+TGG | + | chr2_1:16879465-16879484 | Msa0198290:intron | 25.0% |
| !! | AAAAAATATTGGTGCTTCAT+GGG | + | chr2_1:16879466-16879485 | Msa0198290:intron | 25.0% |
| !! | TTTATCTTACCTGTTTCTTA+TGG | + | chr2_1:16879686-16879705 | Msa0198290:intron | 25.0% |
| ! | ATCATCAATAAACCTGTTAA+TGG | - | chr2_1:16879894-16879913 | None:intergenic | 25.0% |
| !!! | CAAAATTAAATAGAAGTACC+TGG | - | chr2_1:16879981-16880000 | None:intergenic | 25.0% |
| ! | ACTTTACAATAGTACTAACT+AGG | + | chr2_1:16880003-16880022 | Msa0198290:intron | 25.0% |
| ! | AAGAGCAAAAATCAAAATAG+TGG | - | chr2_1:16880439-16880458 | None:intergenic | 25.0% |
| ! | TAAAAATTATGGTAAGCACA+AGG | - | chr2_1:16880530-16880549 | None:intergenic | 25.0% |
| !! | TTGTGCTTACCATAATTTTT+AGG | + | chr2_1:16880529-16880548 | Msa0198290:intron | 25.0% |
| ! | GTGAGAATTGAAATGAATTA+TGG | + | chr2_1:16881004-16881023 | Msa0198290:intron | 25.0% |
| !!! | CTTTAAGATTTTCAGTTTCT+CGG | - | chr2_1:16881118-16881137 | None:intergenic | 25.0% |
| !! | GCAAATAAATTGCAGTTTTA+AGG | - | chr2_1:16881292-16881311 | None:intergenic | 25.0% |
| ! | GCATTTAACAACTTATCAAT+TGG | + | chr2_1:16881416-16881435 | Msa0198290:intron | 25.0% |
| !!! | TCTGTTGATGATAATTGATA+CGG | - | chr2_1:16881743-16881762 | None:intergenic | 25.0% |
| ! | AAAATTACCATTCAATCCTT+TGG | - | chr2_1:16881931-16881950 | None:intergenic | 25.0% |
| !!! | TTCTTTTCTTTGAGTTTCTT+GGG | - | chr2_1:16882067-16882086 | None:intergenic | 25.0% |
| !! | ATCTTAAACTTCATTTCTAG+AGG | - | chr2_1:16882140-16882159 | None:intergenic | 25.0% |
| !! | CTAGAAATGAAGTTTAAGAT+AGG | + | chr2_1:16882140-16882159 | Msa0198290:three_prime_UTR | 25.0% |
| ! | AAATATCAACACGAAATGAT+AGG | - | chr2_1:16882201-16882220 | None:intergenic | 25.0% |
| !! | TATCATTTCGTGTTGATATT+TGG | + | chr2_1:16882200-16882219 | Msa0198290:three_prime_UTR | 25.0% |
| ! | ATAACTCACAACATTAAGAA+TGG | - | chr2_1:16882336-16882355 | None:intergenic | 25.0% |
| !! | TAGTATCAGTTTGTTACCAA+TGG | + | chr2_1:16874981-16875000 | Msa0198290:exon | 30.0% |
| ACAAAGACACTATGGAATTA+TGG | - | chr2_1:16875628-16875647 | None:intergenic | 30.0% | |
| CTTAAAAGATCTGAATAGAC+AGG | - | chr2_1:16875764-16875783 | None:intergenic | 30.0% | |
| ! | CTGTCTATTCAGATCTTTTA+AGG | + | chr2_1:16875762-16875781 | Msa0198290:CDS | 30.0% |
| !! | TATTGAAGCCTTATTTGGTA+AGG | + | chr2_1:16875909-16875928 | Msa0198290:intron | 30.0% |
| ATCCAAATCCTTACCAAATA+AGG | - | chr2_1:16875920-16875939 | None:intergenic | 30.0% | |
| !! | GCGAGATGTATATTTTAAAG+TGG | - | chr2_1:16876015-16876034 | None:intergenic | 30.0% |
| TCTGATCTTCAATTAACAGT+TGG | + | chr2_1:16876046-16876065 | Msa0198290:intron | 30.0% | |
| CTGATCTTCAATTAACAGTT+GGG | + | chr2_1:16876047-16876066 | Msa0198290:intron | 30.0% | |
| TTGTCTTTAACATACAGATC+GGG | + | chr2_1:16876387-16876406 | Msa0198290:intron | 30.0% | |
| !!! | AAAAAGTGTTTTGCAGGAAA+AGG | + | chr2_1:16876451-16876470 | Msa0198290:CDS | 30.0% |
| !! | TGATTTTTCTTTGGTGTATG+AGG | + | chr2_1:16876513-16876532 | Msa0198290:intron | 30.0% |
| ! | TATCTCCATTCCTATAGTTT+TGG | + | chr2_1:16876697-16876716 | Msa0198290:intron | 30.0% |
| ATACACCAAAACTATAGGAA+TGG | - | chr2_1:16876705-16876724 | None:intergenic | 30.0% | |
| ! | TCTGTACCTAACTATAGTTT+TGG | - | chr2_1:16876786-16876805 | None:intergenic | 30.0% |
| ! | TTTGAAATGGCAAGAGAAAA+AGG | - | chr2_1:16876811-16876830 | None:intergenic | 30.0% |
| ! | CTAGAAATTTTCTTGTTGCA+AGG | - | chr2_1:16876891-16876910 | None:intergenic | 30.0% |
| CTTGCAACAAGAAAATTTCT+AGG | + | chr2_1:16876889-16876908 | Msa0198290:intron | 30.0% | |
| ! | CTTCCTATGCAAATTTTTCA+TGG | + | chr2_1:16877015-16877034 | Msa0198290:intron | 30.0% |
| ! | AAGCAAATGAAGTGTTATGA+GGG | + | chr2_1:16877082-16877101 | Msa0198290:intron | 30.0% |
| AGAGTTAGAGATCATCAATA+TGG | + | chr2_1:16877116-16877135 | Msa0198290:intron | 30.0% | |
| !!! | CATATTTTTTAGATGTGGGA+CGG | + | chr2_1:16877229-16877248 | Msa0198290:intron | 30.0% |
| !!! | ATATTTTTTAGATGTGGGAC+GGG | + | chr2_1:16877230-16877249 | Msa0198290:intron | 30.0% |
| !!! | AGGCTGAAGAATTTTGATTT+TGG | + | chr2_1:16877361-16877380 | Msa0198290:intron | 30.0% |
| TTGACATCAGTTAACTTCAA+TGG | - | chr2_1:16877422-16877441 | None:intergenic | 30.0% | |
| AAGTTAACTGATGTCAACAT+TGG | + | chr2_1:16877425-16877444 | Msa0198290:intron | 30.0% | |
| TAATTACACTCAGCAAACTT+AGG | - | chr2_1:16877553-16877572 | None:intergenic | 30.0% | |
| ! | ATCTTCATCCCTTTAAGAAT+TGG | + | chr2_1:16877612-16877631 | Msa0198290:intron | 30.0% |
| TTACTTGATATTGAAGCTCT+AGG | + | chr2_1:16877929-16877948 | Msa0198290:intron | 30.0% | |
| GAAAAACCATTTCACCATTT+GGG | - | chr2_1:16877998-16878017 | None:intergenic | 30.0% | |
| TTATCCTTGACATGAGTAAA+CGG | - | chr2_1:16878020-16878039 | None:intergenic | 30.0% | |
| TTCAACTTCTTGCAAATACA+AGG | + | chr2_1:16878341-16878360 | Msa0198290:intron | 30.0% | |
| ! | ACCAAGTTGTCCTTTATTTA+TGG | + | chr2_1:16878436-16878455 | Msa0198290:intron | 30.0% |
| TCCATAAATAAAGGACAACT+TGG | - | chr2_1:16878440-16878459 | None:intergenic | 30.0% | |
| GGATAGATCTCCATAAATAA+AGG | - | chr2_1:16878449-16878468 | None:intergenic | 30.0% | |
| ! | GCATTTTTATGAAATCCTTG+TGG | + | chr2_1:16878598-16878617 | Msa0198290:intron | 30.0% |
| TGGAAAACTTATGTAACAAG+AGG | + | chr2_1:16878631-16878650 | Msa0198290:intron | 30.0% | |
| ATAATCAACACTATCTTAGG+TGG | - | chr2_1:16878675-16878694 | None:intergenic | 30.0% | |
| TCAAAGAATAAAAAGGAAGC+AGG | - | chr2_1:16878721-16878740 | None:intergenic | 30.0% | |
| GCAAATAATCCCTGAAATTT+GGG | - | chr2_1:16878792-16878811 | None:intergenic | 30.0% | |
| TGCAAATAATCCCTGAAATT+TGG | - | chr2_1:16878793-16878812 | None:intergenic | 30.0% | |
| TTATTCACTAACTAATGTGG+GGG | - | chr2_1:16878833-16878852 | None:intergenic | 30.0% | |
| ! | TTGGTATAGGTTTTTGTCTT+AGG | + | chr2_1:16878992-16879011 | Msa0198290:intron | 30.0% |
| ! | CGGCATTTCTAAAAAAACAA+AGG | + | chr2_1:16879040-16879059 | Msa0198290:intron | 30.0% |
| TATATTGCTCAAATGAAAGG+TGG | + | chr2_1:16879124-16879143 | Msa0198290:intron | 30.0% | |
| ATATTGCTCAAATGAAAGGT+GGG | + | chr2_1:16879125-16879144 | Msa0198290:intron | 30.0% | |
| TAAAATTCAAACGGTTCAAG+AGG | - | chr2_1:16879200-16879219 | None:intergenic | 30.0% | |
| TCAGAGCTTAGGATATTATT+TGG | + | chr2_1:16879563-16879582 | Msa0198290:intron | 30.0% | |
| AACATGAAATTACACATCCA+TGG | - | chr2_1:16879668-16879687 | None:intergenic | 30.0% | |
| ATGAGATTTCCATAAGAAAC+AGG | - | chr2_1:16879698-16879717 | None:intergenic | 30.0% | |
| ATTAAGAAGCAATGAAGACA+AGG | - | chr2_1:16879735-16879754 | None:intergenic | 30.0% | |
| !! | ATTATCACCACTTTTACTGT+AGG | - | chr2_1:16879954-16879973 | None:intergenic | 30.0% |
| TACTAACTAGGACAATCTTA+TGG | + | chr2_1:16880015-16880034 | Msa0198290:intron | 30.0% | |
| ! | GCTAGTCTAAGTTAATGTAT+CGG | + | chr2_1:16880165-16880184 | Msa0198290:intron | 30.0% |
| AATGAAGACAATGAATGGAT+AGG | - | chr2_1:16880219-16880238 | None:intergenic | 30.0% | |
| AAAAAGAGAGAAAACTGAAG+AGG | - | chr2_1:16880259-16880278 | None:intergenic | 30.0% | |
| ACTAGGTTAAATGAAGTTCA+CGG | + | chr2_1:16880330-16880349 | Msa0198290:intron | 30.0% | |
| !!! | CTTCACTATGTTTTTTCATG+AGG | + | chr2_1:16880758-16880777 | Msa0198290:intron | 30.0% |
| ! | AGAGAATTGAACTAACCTTT+TGG | - | chr2_1:16880890-16880909 | None:intergenic | 30.0% |
| TTTAGAGGCAATCATAGAAA+TGG | + | chr2_1:16881143-16881162 | Msa0198290:intron | 30.0% | |
| TATAGGAAGGAAATCAAACA+TGG | - | chr2_1:16881219-16881238 | None:intergenic | 30.0% | |
| ATAATTGTTGCAGATATCAG+CGG | + | chr2_1:16881712-16881731 | Msa0198290:intron | 30.0% | |
| CAACAAACATGTCAAACAAT+TGG | - | chr2_1:16881968-16881987 | None:intergenic | 30.0% | |
| ! | GTTTGACATGTTTGTTGAAT+AGG | + | chr2_1:16881971-16881990 | Msa0198290:intron | 30.0% |
| !! | TCTTTTCTTTGAGTTTCTTG+GGG | - | chr2_1:16882066-16882085 | None:intergenic | 30.0% |
| !! | GTTCTTTTCTTTGAGTTTCT+TGG | - | chr2_1:16882068-16882087 | None:intergenic | 30.0% |
| CATTAACAAATCCACGATAT+AGG | + | chr2_1:16882228-16882247 | Msa0198290:three_prime_UTR | 30.0% | |
| AGTTGAACATGAAGTTGCTA+GGG | - | chr2_1:16875022-16875041 | None:intergenic | 35.0% | |
| TAGTTGAACATGAAGTTGCT+AGG | - | chr2_1:16875023-16875042 | None:intergenic | 35.0% | |
| AAAACGCAATTGTTCGAATG+TGG | - | chr2_1:16875268-16875287 | None:intergenic | 35.0% | |
| AATCGAACAGCGTTCAATAA+AGG | + | chr2_1:16875401-16875420 | Msa0198290:CDS | 35.0% | |
| GTTAACACCGATAATAGTTG+AGG | + | chr2_1:16875490-16875509 | Msa0198290:intron | 35.0% | |
| ACAAACACACAAAGACACTA+TGG | - | chr2_1:16875636-16875655 | None:intergenic | 35.0% | |
| ATTGCAGCATTTGAGAAACT+TGG | + | chr2_1:16875713-16875732 | Msa0198290:intron | 35.0% | |
| TGCTTATGCATGTGTTGTAA+TGG | + | chr2_1:16875827-16875846 | Msa0198290:intron | 35.0% | |
| !! | AGCCTTATTTGGTAAGGATT+TGG | + | chr2_1:16875915-16875934 | Msa0198290:intron | 35.0% |
| ATTCTAGATTCTACACAGTC+AGG | - | chr2_1:16876094-16876113 | None:intergenic | 35.0% | |
| !! | TAAATTTTCAGAAGAAGCGC+TGG | + | chr2_1:16876215-16876234 | Msa0198290:intron | 35.0% |
| ! | AGTTGTTCATCTTTTGTCTG+TGG | + | chr2_1:16876278-16876297 | Msa0198290:intron | 35.0% |
| ! | TCATCTTTTGTCTGTGGTAT+AGG | + | chr2_1:16876284-16876303 | Msa0198290:intron | 35.0% |
| ! | CATCTTTTGTCTGTGGTATA+GGG | + | chr2_1:16876285-16876304 | Msa0198290:intron | 35.0% |
| ! | ATCTTTTGTCTGTGGTATAG+GGG | + | chr2_1:16876286-16876305 | Msa0198290:intron | 35.0% |
| !!! | CTTCACAAAAAGTGTTTTGC+AGG | + | chr2_1:16876445-16876464 | Msa0198290:CDS | 35.0% |
| AAGGTAAACGTTCTTACACT+TGG | + | chr2_1:16876470-16876489 | Msa0198290:intron | 35.0% | |
| AGAAGAACATATTCCCTAGT+AGG | + | chr2_1:16876639-16876658 | Msa0198290:intron | 35.0% | |
| GATAATCTCTACTCCTACTA+GGG | - | chr2_1:16876655-16876674 | None:intergenic | 35.0% | |
| AGATAATCTCTACTCCTACT+AGG | - | chr2_1:16876656-16876675 | None:intergenic | 35.0% | |
| CAAGGTAAGAAAGTCAACAA+TGG | - | chr2_1:16876873-16876892 | None:intergenic | 35.0% | |
| TTAAACGGAAACTCAGGATT+GGG | - | chr2_1:16876994-16877013 | None:intergenic | 35.0% | |
| ATTAAACGGAAACTCAGGAT+TGG | - | chr2_1:16876995-16877014 | None:intergenic | 35.0% | |
| ! | CAAGCAAATGAAGTGTTATG+AGG | + | chr2_1:16877081-16877100 | Msa0198290:intron | 35.0% |
| CGTCCCACATCTAAAAAATA+TGG | - | chr2_1:16877231-16877250 | None:intergenic | 35.0% | |
| TTTGATCTGACATCTCACAT+CGG | + | chr2_1:16877301-16877320 | Msa0198290:intron | 35.0% | |
| ! | CGATGAATCATGATTTTGAG+TGG | + | chr2_1:16877330-16877349 | Msa0198290:intron | 35.0% |
| !! | GATTTTGAGTGGAGAAAATC+AGG | + | chr2_1:16877341-16877360 | Msa0198290:intron | 35.0% |
| GTAGGTCAAAATACTTGTGT+AGG | + | chr2_1:16877390-16877409 | Msa0198290:intron | 35.0% | |
| AGATTGAGTACGGAACAAAA+TGG | - | chr2_1:16877646-16877665 | None:intergenic | 35.0% | |
| CTCAAATAGGAGATTGAGTA+CGG | - | chr2_1:16877656-16877675 | None:intergenic | 35.0% | |
| GCTATAGTTTCTTGATTCTC+TGG | + | chr2_1:16877815-16877834 | Msa0198290:intron | 35.0% | |
| GGAAAAACCATTTCACCATT+TGG | - | chr2_1:16877999-16878018 | None:intergenic | 35.0% | |
| ! | TTTTCCGTTTACTCATGTCA+AGG | + | chr2_1:16878013-16878032 | Msa0198290:intron | 35.0% |
| AAAAGTCTATCTTTACGACC+TGG | + | chr2_1:16878139-16878158 | Msa0198290:CDS | 35.0% | |
| TATGGAGATCTATCCCTTAA+AGG | + | chr2_1:16878454-16878473 | Msa0198290:intron | 35.0% | |
| AGTTAAAGAGAGAAATCTCG+AGG | + | chr2_1:16878520-16878539 | Msa0198290:intron | 35.0% | |
| GTTAAAGAGAGAAATCTCGA+GGG | + | chr2_1:16878521-16878540 | Msa0198290:intron | 35.0% | |
| TTAAAGAGAGAAATCTCGAG+GGG | + | chr2_1:16878522-16878541 | Msa0198290:intron | 35.0% | |
| ATGCCTACTAATTGATCCTT+GGG | - | chr2_1:16878582-16878601 | None:intergenic | 35.0% | |
| AATGCCTACTAATTGATCCT+TGG | - | chr2_1:16878583-16878602 | None:intergenic | 35.0% | |
| ATGTAACAAGAGGATGCAAA+TGG | + | chr2_1:16878641-16878660 | Msa0198290:intron | 35.0% | |
| TATTCACTAACTAATGTGGG+GGG | - | chr2_1:16878832-16878851 | None:intergenic | 35.0% | |
| !!! | CGTAAGGATAGTTTTGGTAT+AGG | + | chr2_1:16878979-16878998 | Msa0198290:intron | 35.0% |
| TATTGCTCAAATGAAAGGTG+GGG | + | chr2_1:16879126-16879145 | Msa0198290:intron | 35.0% | |
| AACAACCATTTCCTATGTTC+TGG | - | chr2_1:16879174-16879193 | None:intergenic | 35.0% | |
| ! | TAAGTAGCTTTACTTCGTTG+TGG | - | chr2_1:16879638-16879657 | None:intergenic | 35.0% |
| CACATAATTGGAGCATAGTT+CGG | - | chr2_1:16879759-16879778 | None:intergenic | 35.0% | |
| ATGTTTCTCAGATACTGAGT+AGG | + | chr2_1:16879804-16879823 | Msa0198290:intron | 35.0% | |
| AGAGTAACATCTCCATTAAC+AGG | + | chr2_1:16879879-16879898 | Msa0198290:intron | 35.0% | |
| AAAGTGGTGATAATATTGCC+AGG | + | chr2_1:16879960-16879979 | Msa0198290:CDS | 35.0% | |
| TAACTAGGACAATCTTATGG+TGG | + | chr2_1:16880018-16880037 | Msa0198290:intron | 35.0% | |
| ATTACACACTAGCATGTAAG+AGG | + | chr2_1:16880096-16880115 | Msa0198290:intron | 35.0% | |
| TAGCATGTAAGAGGACTATT+TGG | + | chr2_1:16880105-16880124 | Msa0198290:intron | 35.0% | |
| CTTCACTTAGGTATTCCAAT+AGG | - | chr2_1:16880138-16880157 | None:intergenic | 35.0% | |
| CTATTGGAATACCTAAGTGA+AGG | + | chr2_1:16880136-16880155 | Msa0198290:intron | 35.0% | |
| GAGAGAATGAAGACAATGAA+TGG | - | chr2_1:16880224-16880243 | None:intergenic | 35.0% | |
| CTTTATTGGATGACTGAACT+AGG | + | chr2_1:16880313-16880332 | Msa0198290:intron | 35.0% | |
| TCAATATTTGAGGGGATCTA+AGG | + | chr2_1:16880405-16880424 | Msa0198290:intron | 35.0% | |
| AGGACCATAATAGAAAAGCT+TGG | + | chr2_1:16880549-16880568 | Msa0198290:intron | 35.0% | |
| ! | ATCGCCAAGCTTTTCTATTA+TGG | - | chr2_1:16880556-16880575 | None:intergenic | 35.0% |
| AAGCAAAAAGGTGATGATTG+TGG | + | chr2_1:16880581-16880600 | Msa0198290:CDS | 35.0% | |
| AGCAAAAAGGTGATGATTGT+GGG | + | chr2_1:16880582-16880601 | Msa0198290:CDS | 35.0% | |
| TGAGAGACAAAGAATAGCAA+AGG | + | chr2_1:16880816-16880835 | Msa0198290:CDS | 35.0% | |
| ! | AACTAACCTTTTGGATAAGC+TGG | - | chr2_1:16880881-16880900 | None:intergenic | 35.0% |
| ! | GTGATTTTGCCCAAGATTAT+TGG | + | chr2_1:16881045-16881064 | Msa0198290:intron | 35.0% |
| AAGCTGTCACCAATAATCTT+GGG | - | chr2_1:16881057-16881076 | None:intergenic | 35.0% | |
| TAAGCTGTCACCAATAATCT+TGG | - | chr2_1:16881058-16881077 | None:intergenic | 35.0% | |
| GTTTCTCGGTCTTAGTTATT+TGG | - | chr2_1:16881104-16881123 | None:intergenic | 35.0% | |
| TGTTCATACGCTCTTTCTTT+GGG | - | chr2_1:16881389-16881408 | None:intergenic | 35.0% | |
| ATGTTCATACGCTCTTTCTT+TGG | - | chr2_1:16881390-16881409 | None:intergenic | 35.0% | |
| TGGAAAATGAGTGATTGATC+TGG | + | chr2_1:16881436-16881455 | Msa0198290:intron | 35.0% | |
| AGAAGTTCGATGAACTTGTA+TGG | + | chr2_1:16881689-16881708 | Msa0198290:intron | 35.0% | |
| !! | AATCCTTTGGTTGTTTCTTC+TGG | - | chr2_1:16881918-16881937 | None:intergenic | 35.0% |
| GAAACAACCAAAGGATTGAA+TGG | + | chr2_1:16881921-16881940 | Msa0198290:exon | 35.0% | |
| !! | CTTTTCTTTGAGTTTCTTGG+GGG | - | chr2_1:16882065-16882084 | None:intergenic | 35.0% |
| ! | ATTTGAAGCTGGCAAACAAA+AGG | + | chr2_1:16882108-16882127 | Msa0198290:three_prime_UTR | 35.0% |
| !!! | GTTGTGAGTTATTTTGACTG+CGG | + | chr2_1:16882344-16882363 | Msa0198290:three_prime_UTR | 35.0% |
| !! | GGGACATTTTTAACTCATCA+AGG | - | chr2_1:16882486-16882505 | None:intergenic | 35.0% |
| TCTAAACAGAAGTTGCTTCA+CGG | - | chr2_1:16882575-16882594 | None:intergenic | 35.0% | |
| ! | GACTGTGTTATTGTTGCCAT+TGG | - | chr2_1:16875000-16875019 | None:intergenic | 40.0% |
| AGAGGGAAATCGATGAGAAA+CGG | - | chr2_1:16875112-16875131 | None:intergenic | 40.0% | |
| !! | TTTCCCTCTTTCGTTTTTCC+CGG | + | chr2_1:16875123-16875142 | Msa0198290:CDS | 40.0% |
| TTGTTGATGCGTATCGTGTA+GGG | + | chr2_1:16875378-16875397 | Msa0198290:CDS | 40.0% | |
| !! | ATTAAATGTGTCGGTGTCGT+TGG | + | chr2_1:16875532-16875551 | Msa0198290:intron | 40.0% |
| TGTGTTCATGGAGTGTAATG+CGG | + | chr2_1:16875663-16875682 | Msa0198290:intron | 40.0% | |
| ! | TTGGATTTTGTGCAGTGATG+TGG | + | chr2_1:16875934-16875953 | Msa0198290:intron | 40.0% |
| TGTGGTATAGGGGAGAAATT+AGG | + | chr2_1:16876296-16876315 | Msa0198290:intron | 40.0% | |
| TCTTTAACATACAGATCGGG+TGG | + | chr2_1:16876390-16876409 | Msa0198290:intron | 40.0% | |
| TCATTTGTGGGTAGTGATGA+AGG | - | chr2_1:16876416-16876435 | None:intergenic | 40.0% | |
| ATCACTACCCACAAATGAGA+AGG | + | chr2_1:16876418-16876437 | Msa0198290:CDS | 40.0% | |
| TCACTACCCACAAATGAGAA+GGG | + | chr2_1:16876419-16876438 | Msa0198290:CDS | 40.0% | |
| AAGAGTCCCTTCTCATTTGT+GGG | - | chr2_1:16876428-16876447 | None:intergenic | 40.0% | |
| ! | TTTCTTTGGTGTATGAGGAC+TGG | + | chr2_1:16876518-16876537 | Msa0198290:intron | 40.0% |
| ! | TTCTTTGGTGTATGAGGACT+GGG | + | chr2_1:16876519-16876538 | Msa0198290:intron | 40.0% |
| GGAAGATTAAACGGAAACTC+AGG | - | chr2_1:16877000-16877019 | None:intergenic | 40.0% | |
| CTTAGTACATCGAACTAGTC+TGG | - | chr2_1:16877061-16877080 | None:intergenic | 40.0% | |
| CGTACTCAATCTCCTATTTG+AGG | + | chr2_1:16877654-16877673 | Msa0198290:intron | 40.0% | |
| CTCTTGTCTGTTAGCAAATG+TGG | + | chr2_1:16877692-16877711 | Msa0198290:intron | 40.0% | |
| !! | GGGCAAGATTTTAGCCTTTT+AGG | - | chr2_1:16877978-16877997 | None:intergenic | 40.0% |
| AGGCTAAAATCTTGCCCAAA+TGG | + | chr2_1:16877981-16878000 | Msa0198290:intron | 40.0% | |
| ATCTTGCCCAAATGGTGAAA+TGG | + | chr2_1:16877989-16878008 | Msa0198290:intron | 40.0% | |
| ACTCTTCATCACATATTGGC+AGG | + | chr2_1:16878087-16878106 | Msa0198290:intron | 40.0% | |
| CATCACATATTGGCAGGAAA+AGG | + | chr2_1:16878093-16878112 | Msa0198290:intron | 40.0% | |
| ATATTGGCAGGAAAAGGCTT+TGG | + | chr2_1:16878099-16878118 | Msa0198290:intron | 40.0% | |
| TATTGGCAGGAAAAGGCTTT+GGG | + | chr2_1:16878100-16878119 | Msa0198290:intron | 40.0% | |
| ATAACTCACTGTTCAACACC+AGG | - | chr2_1:16878160-16878179 | None:intergenic | 40.0% | |
| CTTGTCATCTCCTAGTTGTT+GGG | + | chr2_1:16878298-16878317 | Msa0198290:intron | 40.0% | |
| TTTCATGTGACCCAACAACT+AGG | - | chr2_1:16878311-16878330 | None:intergenic | 40.0% | |
| TAATAGGTCTTGCTCTTCCA+TGG | + | chr2_1:16878386-16878405 | Msa0198290:intron | 40.0% | |
| AGTCCCAAGGATCAATTAGT+AGG | + | chr2_1:16878576-16878595 | Msa0198290:intron | 40.0% | |
| AAGGAAGCAGGAAAGAATCA+TGG | - | chr2_1:16878709-16878728 | None:intergenic | 40.0% | |
| ! | TCCTTTTGAGCCCAAATTTC+AGG | + | chr2_1:16878779-16878798 | Msa0198290:intron | 40.0% |
| ! | CCTTTTGAGCCCAAATTTCA+GGG | + | chr2_1:16878780-16878799 | Msa0198290:intron | 40.0% |
| CCACTATGTAAAGGATGTCT+TGG | - | chr2_1:16878870-16878889 | None:intergenic | 40.0% | |
| CCAAGACATCCTTTACATAG+TGG | + | chr2_1:16878867-16878886 | Msa0198290:intron | 40.0% | |
| CCAAAACTATCCTTACGTCT+GGG | - | chr2_1:16878976-16878995 | None:intergenic | 40.0% | |
| ACCAAAACTATCCTTACGTC+TGG | - | chr2_1:16878977-16878996 | None:intergenic | 40.0% | |
| CAGTTCCAGAACATAGGAAA+TGG | + | chr2_1:16879166-16879185 | Msa0198290:intron | 40.0% | |
| TTAAAGGTTGGGTACAGTTG+CGG | - | chr2_1:16879438-16879457 | None:intergenic | 40.0% | |
| TACGGGTACGTTTAGCAAAA+TGG | + | chr2_1:16879528-16879547 | Msa0198290:intron | 40.0% | |
| !! | ATATCCTAAGCTCTGAAGCA+CGG | - | chr2_1:16879559-16879578 | None:intergenic | 40.0% |
| AAGCTACTTATGCAAGTCCA+TGG | + | chr2_1:16879648-16879667 | Msa0198290:intron | 40.0% | |
| ! | CTCAGATACTGAGTAGGTTT+TGG | + | chr2_1:16879810-16879829 | Msa0198290:intron | 40.0% |
| !!! | ACTGAGTAGGTTTTGGAACT+TGG | + | chr2_1:16879817-16879836 | Msa0198290:intron | 40.0% |
| TAGGCTGTCAATATTACCAC+CGG | - | chr2_1:16879935-16879954 | None:intergenic | 40.0% | |
| TTGACAGCCTACAGTAAAAG+TGG | + | chr2_1:16879944-16879963 | Msa0198290:CDS | 40.0% | |
| ! | TAGGACAATCTTATGGTGGA+GGG | + | chr2_1:16880022-16880041 | Msa0198290:intron | 40.0% |
| !!! | GCGTTTGGGCTTGTTTTATT+TGG | + | chr2_1:16880052-16880071 | Msa0198290:intron | 40.0% |
| ! | CTATTTGGTCTTCAGCCTAT+TGG | + | chr2_1:16880120-16880139 | Msa0198290:intron | 40.0% |
| AAGAGAGAAAACTGAAGAGG+AGG | - | chr2_1:16880256-16880275 | None:intergenic | 40.0% | |
| GCAAAAAGGTGATGATTGTG+GGG | + | chr2_1:16880583-16880602 | Msa0198290:CDS | 40.0% | |
| TTATATGGCCAACTTGTCTC+AGG | + | chr2_1:16880627-16880646 | Msa0198290:CDS | 40.0% | |
| ! | AAAGGTGATTGCTTCTGGTT+TGG | + | chr2_1:16880650-16880669 | Msa0198290:CDS | 40.0% |
| TTTGGATGAAGAACTTGCCA+AGG | + | chr2_1:16880668-16880687 | Msa0198290:CDS | 40.0% | |
| CAGCAGAAGCTAGACAAAAT+AGG | - | chr2_1:16880798-16880817 | None:intergenic | 40.0% | |
| GAGACAAAGAATAGCAAAGG+AGG | + | chr2_1:16880819-16880838 | Msa0198290:CDS | 40.0% | |
| ACAAAGAATAGCAAAGGAGG+TGG | + | chr2_1:16880822-16880841 | Msa0198290:CDS | 40.0% | |
| TCGATACCAGCTTATCCAAA+AGG | + | chr2_1:16880872-16880891 | Msa0198290:CDS | 40.0% | |
| TGACAGCTTACAGTTGATCT+TGG | + | chr2_1:16881068-16881087 | Msa0198290:intron | 40.0% | |
| TCGGTCTTAGTTATTTGGCT+TGG | - | chr2_1:16881099-16881118 | None:intergenic | 40.0% | |
| ATGCCAGAAGAAACAACCAA+AGG | + | chr2_1:16881912-16881931 | Msa0198290:CDS | 40.0% | |
| TGGCACAGGATAGTAAACAA+GGG | - | chr2_1:16882025-16882044 | None:intergenic | 40.0% | |
| ! | AACAAACTATCCACTTGCTG+AGG | + | chr2_1:16882085-16882104 | Msa0198290:three_prime_UTR | 40.0% |
| CAAATCCACGATATAGGATG+AGG | + | chr2_1:16882234-16882253 | Msa0198290:three_prime_UTR | 40.0% | |
| ! | GATACGTGTGACTTTTGCTT+TGG | + | chr2_1:16882268-16882287 | Msa0198290:three_prime_UTR | 40.0% |
| TGTGATGCTGTTATCTGAAC+AGG | + | chr2_1:16882409-16882428 | Msa0198290:three_prime_UTR | 40.0% | |
| GATGAGTTAAAAATGTCCCG+TGG | + | chr2_1:16882487-16882506 | Msa0198290:three_prime_UTR | 40.0% | |
| ! | CTTTGGTATTCGACTTGCTT+TGG | + | chr2_1:16882512-16882531 | Msa0198290:intron | 40.0% |
| ! | CTTTGGTATTCGACTTGCTT+TGG | + | chr2_1:16882512-16882531 | Msa0198290:intron | 40.0% |
| CGATGAGAAACGGTTACGTT+GGG | - | chr2_1:16875102-16875121 | None:intergenic | 45.0% | |
| TCGATGAGAAACGGTTACGT+TGG | - | chr2_1:16875103-16875122 | None:intergenic | 45.0% | |
| TTGCCGGGAAAAACGAAAGA+GGG | - | chr2_1:16875129-16875148 | None:intergenic | 45.0% | |
| TTTGCCGGGAAAAACGAAAG+AGG | - | chr2_1:16875130-16875149 | None:intergenic | 45.0% | |
| CTTGTTGATGCGTATCGTGT+AGG | + | chr2_1:16875377-16875396 | Msa0198290:CDS | 45.0% | |
| CACCAGATACACCTTCAGTT+CGG | + | chr2_1:16875579-16875598 | Msa0198290:intron | 45.0% | |
| TTGGACTTGATTGTGCGAGT+TGG | + | chr2_1:16875732-16875751 | Msa0198290:CDS | 45.0% | |
| CATCTTATAGCCGAGATCCA+CGG | - | chr2_1:16875960-16875979 | None:intergenic | 45.0% | |
| GAAGAGTCCCTTCTCATTTG+TGG | - | chr2_1:16876429-16876448 | None:intergenic | 45.0% | |
| ! | ACTCAGGATTGGGTTGTTGT+TGG | - | chr2_1:16876984-16877003 | None:intergenic | 45.0% |
| ! | TGAAGTGTTATGAGGGAGAC+AGG | + | chr2_1:16877089-16877108 | Msa0198290:intron | 45.0% |
| CTAGGAGATGACAAGCAACT+AGG | - | chr2_1:16878293-16878312 | None:intergenic | 45.0% | |
| GCTTGTCATCTCCTAGTTGT+TGG | + | chr2_1:16878297-16878316 | Msa0198290:intron | 45.0% | |
| TGGGTCACATGAAAGAGTTG+TGG | + | chr2_1:16878317-16878336 | Msa0198290:intron | 45.0% | |
| GTTCTATGCAACTCCTACCA+TGG | - | chr2_1:16878418-16878437 | None:intergenic | 45.0% | |
| ATCCTTGGGACTCATAGAAG+AGG | - | chr2_1:16878568-16878587 | None:intergenic | 45.0% | |
| ATCCTTGTGGAGTCCTTTGA+TGG | + | chr2_1:16878611-16878630 | Msa0198290:intron | 45.0% | |
| TTCCATCAAAGGACTCCACA+AGG | - | chr2_1:16878616-16878635 | None:intergenic | 45.0% | |
| CCCTGAAATTTGGGCTCAAA+AGG | - | chr2_1:16878783-16878802 | None:intergenic | 45.0% | |
| ! | TTTTTCTAGGCCCAGACGTA+AGG | + | chr2_1:16878963-16878982 | Msa0198290:intron | 45.0% |
| ! | CCCAGACGTAAGGATAGTTT+TGG | + | chr2_1:16878973-16878992 | Msa0198290:intron | 45.0% |
| ! | AACAAAGGTACGGGTACGTT+AGG | + | chr2_1:16879055-16879074 | Msa0198290:intron | 45.0% |
| ! | TGAAAGGTGGGGCATTTAGT+AGG | + | chr2_1:16879137-16879156 | Msa0198290:intron | 45.0% |
| AAGCAGCAGTTCCAGAACAT+AGG | + | chr2_1:16879160-16879179 | Msa0198290:intron | 45.0% | |
| GTACTGCAGTGGTACTTGAA+GGG | - | chr2_1:16879416-16879435 | None:intergenic | 45.0% | |
| TTTGCTAAACGTACCCGTAC+CGG | - | chr2_1:16879527-16879546 | None:intergenic | 45.0% | |
| !! | TATCCTAAGCTCTGAAGCAC+GGG | - | chr2_1:16879558-16879577 | None:intergenic | 45.0% |
| CTAGGACAATCTTATGGTGG+AGG | + | chr2_1:16880021-16880040 | Msa0198290:intron | 45.0% | |
| ! | AGGACAATCTTATGGTGGAG+GGG | + | chr2_1:16880023-16880042 | Msa0198290:intron | 45.0% |
| ! | AATCTTATGGTGGAGGGGAT+GGG | + | chr2_1:16880028-16880047 | Msa0198290:intron | 45.0% |
| CTAGCAGCATACCTTCACTT+AGG | - | chr2_1:16880150-16880169 | None:intergenic | 45.0% | |
| ! | AGTGTCCACGTCTATTTTCC+TGG | + | chr2_1:16880468-16880487 | Msa0198290:intron | 45.0% |
| ! | GTGTCCACGTCTATTTTCCT+GGG | + | chr2_1:16880469-16880488 | Msa0198290:intron | 45.0% |
| ! | TGTCCACGTCTATTTTCCTG+GGG | + | chr2_1:16880470-16880489 | Msa0198290:intron | 45.0% |
| TGGCGATGATCGAAGCAAAA+AGG | + | chr2_1:16880569-16880588 | Msa0198290:CDS | 45.0% | |
| GAGGCTGGGCAAAGTTTATA+TGG | + | chr2_1:16880612-16880631 | Msa0198290:CDS | 45.0% | |
| TCACCTTTCCTGAGACAAGT+TGG | - | chr2_1:16880638-16880657 | None:intergenic | 45.0% | |
| TCAGGAAAGGTGATTGCTTC+TGG | + | chr2_1:16880645-16880664 | Msa0198290:CDS | 45.0% | |
| GAAGTACATACCTGCTCTTG+TGG | - | chr2_1:16880697-16880716 | None:intergenic | 45.0% | |
| GTCCAGTCTAGAGAAGATTG+TGG | + | chr2_1:16881522-16881541 | Msa0198290:intron | 45.0% | |
| AGCCACAATCTTCTCTAGAC+TGG | - | chr2_1:16881527-16881546 | None:intergenic | 45.0% | |
| GATAGGTAGCCCTGCATATT+CGG | - | chr2_1:16881566-16881585 | None:intergenic | 45.0% | |
| ACAAGGACACAGTTGCAGAT+AGG | - | chr2_1:16881583-16881602 | None:intergenic | 45.0% | |
| ! | GCATGCCATGTGTTGTTCTA+CGG | + | chr2_1:16881644-16881663 | Msa0198290:CDS | 45.0% |
| !! | AGCTCTAGATGTCAAACTGC+AGG | - | chr2_1:16881818-16881837 | None:intergenic | 45.0% |
| TCCACAGTGGCAATTGCTAA+GGG | - | chr2_1:16881847-16881866 | None:intergenic | 45.0% | |
| ATCCACAGTGGCAATTGCTA+AGG | - | chr2_1:16881848-16881867 | None:intergenic | 45.0% | |
| TTAGCAATTGCCACTGTGGA+TGG | + | chr2_1:16881847-16881866 | Msa0198290:CDS | 45.0% | |
| TAGCAATTGCCACTGTGGAT+GGG | + | chr2_1:16881848-16881867 | Msa0198290:CDS | 45.0% | |
| CTGGCACAGGATAGTAAACA+AGG | - | chr2_1:16882026-16882045 | None:intergenic | 45.0% | |
| TGTTTACTATCCTGTGCCAG+AGG | + | chr2_1:16882026-16882045 | Msa0198290:three_prime_UTR | 45.0% | |
| AGCTTCAAATCCTCAGCAAG+TGG | - | chr2_1:16882098-16882117 | None:intergenic | 45.0% | |
| ! | ACTTGCTGAGGATTTGAAGC+TGG | + | chr2_1:16882097-16882116 | Msa0198290:three_prime_UTR | 45.0% |
| TCTTCAGAGACAGTGTTTGC+TGG | + | chr2_1:16882165-16882184 | Msa0198290:three_prime_UTR | 45.0% | |
| GTTTGCCTCATCCTATATCG+TGG | - | chr2_1:16882242-16882261 | None:intergenic | 45.0% | |
| ! | AAAGCTTTAACTGCAGTCGC+TGG | + | chr2_1:16882368-16882387 | Msa0198290:three_prime_UTR | 45.0% |
| ! | AAGCTTTAACTGCAGTCGCT+GGG | + | chr2_1:16882369-16882388 | Msa0198290:three_prime_UTR | 45.0% |
| AAAAATGTCCCGTGGAGCTT+TGG | + | chr2_1:16882495-16882514 | Msa0198290:three_prime_UTR | 45.0% | |
| AGTCGAATACCAAAGCTCCA+CGG | - | chr2_1:16882507-16882526 | None:intergenic | 45.0% | |
| !! | TTATATAAAATAATCTTTAT+TGG | + | chr2_1:16880299-16880318 | Msa0198290:intron | 5.0% |
| !! | AAAAAAAAAAAAAAAAATCA+TGG | + | chr2_1:16880926-16880945 | Msa0198290:intron | 5.0% |
| !!! | TATTAAATTTAAAATCATAT+AGG | - | chr2_1:16881236-16881255 | None:intergenic | 5.0% |
| GGTGTTAACGTGTCAGTGTC+CGG | - | chr2_1:16875479-16875498 | None:intergenic | 50.0% | |
| !! | TGTGTCGGTGTCGTTGGTAT+TGG | + | chr2_1:16875538-16875557 | Msa0198290:intron | 50.0% |
| ! | CACCGAACTGAAGGTGTATC+TGG | - | chr2_1:16875584-16875603 | None:intergenic | 50.0% |
| ! | GTAGCATAGCACCGAACTGA+AGG | - | chr2_1:16875593-16875612 | None:intergenic | 50.0% |
| TGGGACGGGCCAAATGAATT+TGG | + | chr2_1:16877244-16877263 | Msa0198290:intron | 50.0% | |
| GATGACGAGTTCAACGACTG+AGG | - | chr2_1:16878269-16878288 | None:intergenic | 50.0% | |
| ATGCAACTCCTACCATGGCT+AGG | - | chr2_1:16878413-16878432 | None:intergenic | 50.0% | |
| GAAATCTCGAGGGGTCTTGA+AGG | + | chr2_1:16878531-16878550 | Msa0198290:intron | 50.0% | |
| GACCTCTTCTATGAGTCCCA+AGG | + | chr2_1:16878563-16878582 | Msa0198290:intron | 50.0% | |
| GGTACTGCAGTGGTACTTGA+AGG | - | chr2_1:16879417-16879436 | None:intergenic | 50.0% | |
| TTGCTAAACGTACCCGTACC+GGG | - | chr2_1:16879526-16879545 | None:intergenic | 50.0% | |
| ! | CAATCTTATGGTGGAGGGGA+TGG | + | chr2_1:16880027-16880046 | Msa0198290:intron | 50.0% |
| ACTGAAGAGGAGGAGAGAGA+GGG | - | chr2_1:16880246-16880265 | None:intergenic | 50.0% | |
| AACTGAAGAGGAGGAGAGAG+AGG | - | chr2_1:16880247-16880266 | None:intergenic | 50.0% | |
| TCTCCCCAGGAAAATAGACG+TGG | - | chr2_1:16880476-16880495 | None:intergenic | 50.0% | |
| GGTGATGATTGTGGGGATTG+AGG | + | chr2_1:16880590-16880609 | Msa0198290:CDS | 50.0% | |
| GATGATTGTGGGGATTGAGG+AGG | + | chr2_1:16880593-16880612 | Msa0198290:CDS | 50.0% | |
| TGGCCAACTTGTCTCAGGAA+AGG | + | chr2_1:16880632-16880651 | Msa0198290:CDS | 50.0% | |
| GATTGTGGCTGCACTACATG+CGG | + | chr2_1:16881537-16881556 | Msa0198290:CDS | 50.0% | |
| ATTGTGGCTGCACTACATGC+GGG | + | chr2_1:16881538-16881557 | Msa0198290:CDS | 50.0% | |
| TGCAACTGTGTCCTTGTTGC+AGG | + | chr2_1:16881586-16881605 | Msa0198290:CDS | 50.0% | |
| CTGCTCCGTAGAACAACACA+TGG | - | chr2_1:16881652-16881671 | None:intergenic | 50.0% | |
| ! | CATGTGTTGTTCTACGGAGC+AGG | + | chr2_1:16881650-16881669 | Msa0198290:CDS | 50.0% |
| CCACAGTGGCAATTGCTAAG+GGG | - | chr2_1:16881846-16881865 | None:intergenic | 50.0% | |
| ! | ATTGCCACTGTGGATGGGTT+TGG | + | chr2_1:16881853-16881872 | Msa0198290:CDS | 50.0% |
| CCTGTGCCAGAGGTTTGTAT+CGG | + | chr2_1:16882036-16882055 | Msa0198290:three_prime_UTR | 50.0% | |
| GGGTAACCGATACAAACCTC+TGG | - | chr2_1:16882045-16882064 | None:intergenic | 50.0% | |
| GTCGAATACCAAAGCTCCAC+GGG | - | chr2_1:16882506-16882525 | None:intergenic | 50.0% | |
| GATGTGGCTGTCGTCGTCAT+CGG | - | chr2_1:16875187-16875206 | None:intergenic | 55.0% | |
| CGAGGTCATTCGACGTGATG+TGG | - | chr2_1:16875203-16875222 | None:intergenic | 55.0% | |
| GCCGTTCTTCTCGAAGTCGA+CGG | + | chr2_1:16875222-16875241 | Msa0198290:CDS | 55.0% | |
| !! | CCCGTCGACTTCGAGAAGAA+CGG | - | chr2_1:16875226-16875245 | None:intergenic | 55.0% |
| CCGTTCTTCTCGAAGTCGAC+GGG | + | chr2_1:16875223-16875242 | Msa0198290:CDS | 55.0% | |
| TTTGTGCAGTGATGTGGCCG+TGG | + | chr2_1:16875940-16875959 | Msa0198290:intron | 55.0% | |
| AGTGATGTGGCCGTGGATCT+CGG | + | chr2_1:16875947-16875966 | Msa0198290:intron | 55.0% | |
| !! | CAGAAGAAGCGCTGGAGATG+AGG | + | chr2_1:16876223-16876242 | Msa0198290:intron | 55.0% |
| CTCTTCCATGGACCTAGCCA+TGG | + | chr2_1:16878398-16878417 | Msa0198290:intron | 55.0% | |
| TCCATGGACCTAGCCATGGT+AGG | + | chr2_1:16878402-16878421 | Msa0198290:intron | 55.0% | |
| TCCTACCATGGCTAGGTCCA+TGG | - | chr2_1:16878406-16878425 | None:intergenic | 55.0% | |
| GTCTTAGGATCTGCGTTGCG+CGG | + | chr2_1:16879007-16879026 | Msa0198290:intron | 55.0% | |
| TCTTAGGATCTGCGTTGCGC+GGG | + | chr2_1:16879008-16879027 | Msa0198290:intron | 55.0% | |
| GTACAGTTGCGGTACTGCAG+TGG | - | chr2_1:16879427-16879446 | None:intergenic | 55.0% | |
| GTACCCGTGCTTCAGAGCTT+AGG | + | chr2_1:16879552-16879571 | Msa0198290:intron | 55.0% | |
| AGTGTGCTCATGTTCTCCCC+AGG | - | chr2_1:16880489-16880508 | None:intergenic | 55.0% | |
| ATTGTGGGGATTGAGGAGGC+TGG | + | chr2_1:16880597-16880616 | Msa0198290:CDS | 55.0% | |
| TTGTGGGGATTGAGGAGGCT+GGG | + | chr2_1:16880598-16880617 | Msa0198290:CDS | 55.0% | |
| ACCTGCTCTTGTGGCTTCCT+TGG | - | chr2_1:16880688-16880707 | None:intergenic | 55.0% | |
| CGCTCTTTCTTTGGGCGTTC+TGG | - | chr2_1:16881381-16881400 | None:intergenic | 55.0% | |
| ATGCGGGAGCCGAATATGCA+GGG | + | chr2_1:16881554-16881573 | Msa0198290:CDS | 55.0% | |
| ! | CAGTCTGGCTTCCTGCAACA+AGG | - | chr2_1:16881600-16881619 | None:intergenic | 55.0% |
| CTTGTTGCAGGAAGCCAGAC+TGG | + | chr2_1:16881598-16881617 | Msa0198290:CDS | 55.0% | |
| CTGGAGTAGCTGGAGCTGAA+CGG | + | chr2_1:16881617-16881636 | Msa0198290:CDS | 55.0% | |
| TGGAGTAGCTGGAGCTGAAC+GGG | + | chr2_1:16881618-16881637 | Msa0198290:CDS | 55.0% | |
| CCCCTTAGCAATTGCCACTG+TGG | + | chr2_1:16881843-16881862 | Msa0198290:CDS | 55.0% | |
| ACCTCCAAACCCATCCACAG+TGG | - | chr2_1:16881860-16881879 | None:intergenic | 55.0% | |
| CCGATACAAACCTCTGGCAC+AGG | - | chr2_1:16882039-16882058 | None:intergenic | 55.0% | |
| CGGAGAAAACTGCGATGGCG+CGG | - | chr2_1:16875161-16875180 | None:intergenic | 60.0% | |
| GGCGACGGAGAAAACTGCGA+TGG | - | chr2_1:16875166-16875185 | None:intergenic | 60.0% | |
| CGACTTCGAGAAGAACGGCG+AGG | - | chr2_1:16875221-16875240 | None:intergenic | 60.0% | |
| CGTTGCGCGGGTACGGAATA+CGG | + | chr2_1:16879020-16879039 | Msa0198290:intron | 60.0% | |
| TGGAGGGGATGGGTGCGTTT+GGG | + | chr2_1:16880038-16880057 | Msa0198290:intron | 60.0% | |
| GCCAAGGAAGCCACAAGAGC+AGG | + | chr2_1:16880684-16880703 | Msa0198290:CDS | 60.0% | |
| CATGCGGGAGCCGAATATGC+AGG | + | chr2_1:16881553-16881572 | Msa0198290:CDS | 60.0% | |
| GGAAGCCAGACTGGAGTAGC+TGG | + | chr2_1:16881607-16881626 | Msa0198290:CDS | 60.0% | |
| CAGCTCCAGCTACTCCAGTC+TGG | - | chr2_1:16881615-16881634 | None:intergenic | 60.0% | |
| AGTAGCTGGAGCTGAACGGG+CGG | + | chr2_1:16881621-16881640 | Msa0198290:CDS | 60.0% | |
| ! | GCCACTGTGGATGGGTTTGG+AGG | + | chr2_1:16881856-16881875 | Msa0198290:CDS | 60.0% |
| AAAACTGCGATGGCGCGGCG+CGG | - | chr2_1:16875156-16875175 | None:intergenic | 65.0% | |
| GCTGTCGTCGTCATCGGCGA+CGG | - | chr2_1:16875181-16875200 | None:intergenic | 65.0% | |
| GGATCTGCGTTGCGCGGGTA+CGG | + | chr2_1:16879013-16879032 | Msa0198290:intron | 65.0% | |
| ACCAGTACCCGCGCAGTACC+CGG | + | chr2_1:16879505-16879524 | Msa0198290:intron | 65.0% | |
| TACCCGCGCAGTACCCGGTA+CGG | + | chr2_1:16879510-16879529 | Msa0198290:intron | 65.0% | |
| ! | TACCCGTACCGGGTACTGCG+CGG | - | chr2_1:16879516-16879535 | None:intergenic | 65.0% |
| GTGGAGGGGATGGGTGCGTT+TGG | + | chr2_1:16880037-16880056 | Msa0198290:intron | 65.0% | |
| GTAGCTGGAGCTGAACGGGC+GGG | + | chr2_1:16881622-16881641 | Msa0198290:CDS | 65.0% | |
| ! | ACCGGGTACTGCGCGGGTAC+TGG | - | chr2_1:16879509-16879528 | None:intergenic | 70.0% |
| ACCCGCGCAGTACCCGGTAC+GGG | + | chr2_1:16879511-16879530 | Msa0198290:intron | 70.0% | |
| ! | ACCCGTACCGGGTACTGCGC+GGG | - | chr2_1:16879515-16879534 | None:intergenic | 70.0% |
| GCGCGGCGCGGAGATTTGCC+GGG | - | chr2_1:16875144-16875163 | None:intergenic | 75.0% | |
| GGCGCGGCGCGGAGATTTGC+CGG | - | chr2_1:16875145-16875164 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 16874924 | 16882682 | 16874924 | ID=Msa0198290;Name=Msa0198290 |
| chr2_1 | mRNA | 16874924 | 16882682 | 16874924 | ID=Msa0198290-mRNA-1;Parent=Msa0198290;Name=Msa0198290-mRNA-1;_AED=0.16;_eAED=0.16;_QI=76|1|1|1|0.83|0.76|13|633|373 |
| chr2_1 | exon | 16874924 | 16875244 | 16874924 | ID=Msa0198290-mRNA-1:exon:6971;Parent=Msa0198290-mRNA-1 |
| chr2_1 | exon | 16875373 | 16875422 | 16875373 | ID=Msa0198290-mRNA-1:exon:6972;Parent=Msa0198290-mRNA-1 |
| chr2_1 | exon | 16875720 | 16875783 | 16875720 | ID=Msa0198290-mRNA-1:exon:6973;Parent=Msa0198290-mRNA-1 |
| chr2_1 | exon | 16876226 | 16876274 | 16876226 | ID=Msa0198290-mRNA-1:exon:6974;Parent=Msa0198290-mRNA-1 |
| chr2_1 | exon | 16876404 | 16876472 | 16876404 | ID=Msa0198290-mRNA-1:exon:6975;Parent=Msa0198290-mRNA-1 |
| chr2_1 | exon | 16878109 | 16878170 | 16878109 | ID=Msa0198290-mRNA-1:exon:6976;Parent=Msa0198290-mRNA-1 |
| chr2_1 | exon | 16879901 | 16879981 | 16879901 | ID=Msa0198290-mRNA-1:exon:6977;Parent=Msa0198290-mRNA-1 |
| chr2_1 | exon | 16880551 | 16880705 | 16880551 | ID=Msa0198290-mRNA-1:exon:6978;Parent=Msa0198290-mRNA-1 |
| chr2_1 | exon | 16880809 | 16880893 | 16880809 | ID=Msa0198290-mRNA-1:exon:6979;Parent=Msa0198290-mRNA-1 |
| chr2_1 | exon | 16881528 | 16881671 | 16881528 | ID=Msa0198290-mRNA-1:exon:6980;Parent=Msa0198290-mRNA-1 |
| chr2_1 | exon | 16881822 | 16881942 | 16881822 | ID=Msa0198290-mRNA-1:exon:6981;Parent=Msa0198290-mRNA-1 |
| chr2_1 | exon | 16882019 | 16882516 | 16882019 | ID=Msa0198290-mRNA-1:exon:6982;Parent=Msa0198290-mRNA-1 |
| chr2_1 | exon | 16882551 | 16882682 | 16882551 | ID=Msa0198290-mRNA-1:exon:6983;Parent=Msa0198290-mRNA-1 |
| chr2_1 | five_prime_UTR | 16874924 | 16874999 | 16874924 | ID=Msa0198290-mRNA-1:five_prime_utr;Parent=Msa0198290-mRNA-1 |
| chr2_1 | CDS | 16875000 | 16875244 | 16875000 | ID=Msa0198290-mRNA-1:cds;Parent=Msa0198290-mRNA-1 |
| chr2_1 | CDS | 16875373 | 16875422 | 16875373 | ID=Msa0198290-mRNA-1:cds;Parent=Msa0198290-mRNA-1 |
| chr2_1 | CDS | 16875720 | 16875783 | 16875720 | ID=Msa0198290-mRNA-1:cds;Parent=Msa0198290-mRNA-1 |
| chr2_1 | CDS | 16876226 | 16876274 | 16876226 | ID=Msa0198290-mRNA-1:cds;Parent=Msa0198290-mRNA-1 |
| chr2_1 | CDS | 16876404 | 16876472 | 16876404 | ID=Msa0198290-mRNA-1:cds;Parent=Msa0198290-mRNA-1 |
| chr2_1 | CDS | 16878109 | 16878170 | 16878109 | ID=Msa0198290-mRNA-1:cds;Parent=Msa0198290-mRNA-1 |
| chr2_1 | CDS | 16879901 | 16879981 | 16879901 | ID=Msa0198290-mRNA-1:cds;Parent=Msa0198290-mRNA-1 |
| chr2_1 | CDS | 16880551 | 16880705 | 16880551 | ID=Msa0198290-mRNA-1:cds;Parent=Msa0198290-mRNA-1 |
| chr2_1 | CDS | 16880809 | 16880893 | 16880809 | ID=Msa0198290-mRNA-1:cds;Parent=Msa0198290-mRNA-1 |
| chr2_1 | CDS | 16881528 | 16881671 | 16881528 | ID=Msa0198290-mRNA-1:cds;Parent=Msa0198290-mRNA-1 |
| chr2_1 | CDS | 16881822 | 16881939 | 16881822 | ID=Msa0198290-mRNA-1:cds;Parent=Msa0198290-mRNA-1 |
| chr2_1 | three_prime_UTR | 16881940 | 16881942 | 16881940 | ID=Msa0198290-mRNA-1:three_prime_utr;Parent=Msa0198290-mRNA-1 |
| chr2_1 | three_prime_UTR | 16882019 | 16882516 | 16882019 | ID=Msa0198290-mRNA-1:three_prime_utr;Parent=Msa0198290-mRNA-1 |
| chr2_1 | three_prime_UTR | 16882551 | 16882682 | 16882551 | ID=Msa0198290-mRNA-1:three_prime_utr;Parent=Msa0198290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
