AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0761640


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0761640 MtrunA17_Chr5g0411911 87.879 363 10 1 290 618 1 363 0.0 639
Msa0761640 MtrunA17_Chr5g0411911 64.118 340 60 3 10 287 12 351 3.74e-138 407
Msa0761640 MtrunA17_Chr5g0411901 79.063 363 41 2 290 618 1 362 0.0 555
Msa0761640 MtrunA17_Chr5g0411901 63.944 355 55 5 1 287 1 350 2.38e-143 420
Msa0761640 MtrunA17_Chr5g0411881 76.816 358 49 1 295 618 5 362 0.0 544
Msa0761640 MtrunA17_Chr5g0411881 64.225 355 54 5 1 287 1 350 1.98e-143 420
Msa0761640 MtrunA17_Chr5g0411871 70.055 364 74 2 288 617 13 375 1.86e-175 502
Msa0761640 MtrunA17_Chr5g0411871 60.563 355 67 6 1 287 15 364 7.63e-131 389
Msa0761640 MtrunA17_Chr5g0411931 73.143 350 60 1 302 617 11 360 2.47e-173 496
Msa0761640 MtrunA17_Chr5g0411931 73.729 354 21 4 1 287 1 349 2.83e-168 483
Msa0761640 MtrunA17_Chr4g0064291 71.225 351 67 1 301 617 10 360 8.01e-173 495
Msa0761640 MtrunA17_Chr4g0064291 60.169 354 69 5 1 287 1 349 1.02e-133 395
Msa0761640 MtrunA17_Chr5g0411821 70.940 351 68 1 301 617 10 360 3.35e-171 493
Msa0761640 MtrunA17_Chr5g0411821 65.330 349 59 3 1 287 1 349 1.64e-148 434
Msa0761640 MtrunA17_Chr5g0411841 70.370 351 70 1 301 617 10 360 1.15e-167 482
Msa0761640 MtrunA17_Chr5g0411841 65.043 349 60 3 1 287 1 349 2.60e-145 425
Msa0761640 MtrunA17_Chr5g0411801 69.231 351 74 1 301 617 42 392 5.58e-165 476
Msa0761640 MtrunA17_Chr5g0411801 59.040 354 73 4 1 287 33 381 6.49e-131 389
Msa0761640 MtrunA17_Chr5g0411811 69.801 351 72 1 301 617 10 360 1.99e-164 474
Msa0761640 MtrunA17_Chr5g0411811 61.032 349 74 6 1 287 1 349 4.10e-128 381
Msa0761640 MtrunA17_Chr8g0367151 70.940 351 68 1 301 617 10 360 2.27e-156 453
Msa0761640 MtrunA17_Chr8g0367151 57.910 354 77 6 1 287 1 349 3.40e-120 360
Msa0761640 MtrunA17_Chr5g0411791 67.683 328 72 1 324 617 7 334 1.08e-136 402
Msa0761640 MtrunA17_Chr5g0411791 57.764 322 64 6 33 287 7 323 9.10e-103 315
Msa0761640 MtrunA17_Chr8g0383721 59.312 349 107 2 300 614 9 356 5.40e-129 383
Msa0761640 MtrunA17_Chr8g0383721 59.471 227 82 3 1 223 1 221 8.08e-84 266
Msa0761640 MtrunA17_Chr8g0383721 68.000 75 24 0 213 287 274 348 2.42e-26 110
Msa0761640 MtrunA17_Chr5g0411941 54.493 345 123 1 305 615 14 358 3.05e-117 353
Msa0761640 MtrunA17_Chr5g0411941 47.619 336 114 7 14 287 14 349 8.00e-82 261
Msa0761640 MtrunA17_Chr1g0157021 53.936 343 123 2 306 613 14 356 1.68e-108 330
Msa0761640 MtrunA17_Chr1g0157021 43.678 348 123 7 8 287 7 349 8.67e-78 251
Msa0761640 MtrunA17_Chr1g0208031 47.564 349 149 1 299 613 6 354 2.83e-100 309
Msa0761640 MtrunA17_Chr1g0208031 42.183 339 134 5 11 287 9 347 1.12e-72 238
Msa0761640 MtrunA17_Chr2g0279791 47.278 349 148 3 302 615 59 406 5.23e-91 287
Msa0761640 MtrunA17_Chr2g0279791 43.235 340 129 7 11 287 59 397 1.42e-74 244
Msa0761640 MtrunA17_Chr2g0279801 50.532 188 82 2 428 615 38 214 2.88e-41 149
Msa0761640 MtrunA17_Chr2g0279801 39.791 191 68 4 144 287 15 205 3.43e-23 98.2
Msa0761640 MtrunA17_Chr5g0411851 87.324 71 9 0 1 71 1 71 7.57e-39 139
Msa0761640 MtrunA17_Chr5g0411851 82.258 62 11 0 301 362 10 71 1.38e-30 115
Msa0761640 MtrunA17_Chr5g0411861 76.562 64 15 0 555 618 2 65 1.66e-28 108
Msa0761640 MtrunA17_Chr5g0411861 79.245 53 11 0 235 287 1 53 9.12e-24 94.7
Msa0761640 MtrunA17_Chr8g0385221 29.612 206 116 8 25 205 68 269 3.84e-16 81.3
Msa0761640 MtrunA17_Chr8g0385221 24.384 365 198 15 316 610 68 424 7.53e-14 73.9
Msa0761640 MtrunA17_Chr6g0474141 28.436 211 132 7 1 204 6 204 3.11e-14 74.7
Msa0761640 MtrunA17_Chr5g0411921 53.448 58 22 1 76 128 3 60 2.89e-12 67.0
Msa0761640 MtrunA17_Chr3g0125911 28.342 187 112 5 39 205 37 221 3.91e-11 65.1
Msa0761640 MtrunA17_Chr3g0125961 27.807 187 113 5 39 205 37 221 6.10e-11 64.7
Msa0761640 MtrunA17_Chr4g0021211 25.405 185 119 3 38 205 60 242 8.33e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0761640 AT4G37980.1 62.994 354 97 1 299 618 4 357 2.39e-141 415
Msa0761640 AT4G37980.1 68.159 201 60 1 11 207 7 207 2.02e-85 271
Msa0761640 AT4G37980.1 73.750 80 21 0 208 287 266 345 2.65e-32 128
Msa0761640 AT4G37990.1 63.559 354 95 1 299 618 4 357 1.06e-139 411
Msa0761640 AT4G37990.1 69.652 201 57 1 11 207 7 207 4.88e-85 270
Msa0761640 AT4G37990.1 76.923 78 18 0 210 287 268 345 1.90e-31 126
Msa0761640 AT4G37970.1 59.312 349 108 1 303 617 13 361 2.98e-139 410
Msa0761640 AT4G37970.1 48.837 344 114 6 6 287 7 350 4.57e-91 286
Msa0761640 AT4G39330.1 54.857 350 124 1 301 616 10 359 6.54e-130 386
Msa0761640 AT4G39330.1 46.991 349 123 6 1 287 1 349 8.91e-96 298
Msa0761640 AT2G21730.1 53.521 355 129 3 298 616 1 355 3.05e-123 369
Msa0761640 AT2G21730.1 47.826 345 106 6 12 287 6 345 4.37e-93 291
Msa0761640 AT2G21890.1 52.260 354 134 2 298 616 1 354 2.33e-122 367
Msa0761640 AT2G21890.1 47.384 344 108 5 12 287 6 344 4.49e-94 294
Msa0761640 AT4G37970.4 56.890 283 88 1 303 551 13 295 5.17e-101 309
Msa0761640 AT4G37970.4 58.738 206 81 1 6 207 7 212 5.13e-74 239
Msa0761640 AT4G37980.2 61.672 287 76 1 299 551 4 290 5.52e-101 309
Msa0761640 AT4G37980.2 68.159 201 60 1 11 207 7 207 2.21e-85 269
Msa0761640 AT4G39330.2 52.721 294 105 1 301 560 10 303 3.92e-98 302
Msa0761640 AT4G39330.2 59.242 211 82 1 1 207 1 211 1.56e-80 257
Msa0761640 AT3G19450.1 48.844 346 143 1 302 613 9 354 7.38e-91 285
Msa0761640 AT3G19450.1 44.543 339 126 6 11 287 9 347 1.02e-68 228
Msa0761640 AT1G72680.1 45.190 343 153 2 307 615 14 355 1.00e-87 277
Msa0761640 AT1G72680.1 41.742 333 133 5 16 287 14 346 1.48e-72 238
Msa0761640 AT4G34230.1 46.821 346 150 1 302 613 8 353 3.94e-82 263
Msa0761640 AT4G34230.1 44.853 272 134 4 7 269 4 268 1.37e-48 174
Msa0761640 AT4G34230.1 48.718 78 40 0 210 287 269 346 3.53e-17 84.0
Msa0761640 AT4G34230.2 46.532 346 151 1 302 613 8 353 2.53e-81 260
Msa0761640 AT4G34230.2 44.853 272 134 4 7 269 4 268 1.28e-48 174
Msa0761640 AT4G34230.2 47.436 78 41 0 210 287 269 346 2.02e-16 81.6
Msa0761640 AT4G37970.3 55.128 234 71 1 303 502 13 246 1.07e-76 245
Msa0761640 AT4G37970.3 58.738 206 81 1 6 207 7 212 3.57e-74 238
Msa0761640 AT4G37970.2 55.411 231 69 1 303 499 13 243 6.96e-76 243
Msa0761640 AT4G37970.2 58.738 206 81 1 6 207 7 212 3.88e-74 238
Msa0761640 AT5G63620.3 31.553 206 112 8 25 205 70 271 8.98e-20 91.3
Msa0761640 AT5G63620.3 24.686 239 121 7 316 499 70 304 1.14e-13 72.8
Msa0761640 AT5G63620.1 31.553 206 112 8 25 205 70 271 1.49e-19 92.0
Msa0761640 AT5G63620.2 31.553 206 112 8 25 205 70 271 1.64e-19 92.0
Msa0761640 AT5G51970.1 30.814 172 101 7 39 202 43 204 6.78e-13 70.9
Msa0761640 AT5G51970.2 30.814 172 101 7 39 202 43 204 6.78e-13 70.9
Msa0761640 AT5G43940.1 24.784 347 188 13 330 609 36 376 2.15e-12 69.7
Msa0761640 AT5G43940.1 27.957 186 114 4 39 205 36 220 1.36e-11 67.0
Msa0761640 AT1G22440.1 26.087 253 137 9 39 258 40 275 2.30e-12 69.7
Msa0761640 AT5G43940.2 24.784 347 188 13 330 609 48 388 2.85e-12 69.3
Msa0761640 AT5G43940.2 27.957 186 114 4 39 205 48 232 1.43e-11 67.0
Msa0761640 AT1G22430.3 24.901 253 151 8 39 258 42 288 9.62e-12 67.0
Msa0761640 AT4G22110.3 25.121 207 128 6 39 224 43 243 9.72e-12 66.6
Msa0761640 AT1G22430.4 25.439 228 135 7 39 237 42 263 1.12e-11 66.6
Msa0761640 AT1G22430.5 25.439 228 135 7 39 237 42 263 1.12e-11 66.6
Msa0761640 AT1G22430.2 24.901 253 151 8 39 258 42 288 1.58e-11 67.0
Msa0761640 AT1G22430.1 24.901 253 151 8 39 258 42 288 1.58e-11 67.0
Msa0761640 AT4G22110.2 25.121 207 128 6 39 224 43 243 2.14e-11 66.6
Msa0761640 AT4G22110.1 25.121 207 128 6 39 224 43 243 2.14e-11 66.6

Find 156 sgRNAs with CRISPR-Local

Find 618 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAATGTTTGAGTATATTT+AGG 0.119813 5_2:+19117948 None:intergenic
GATATTTCACATCTGCTTTA+AGG 0.136438 5_2:+19126509 None:intergenic
GCTGGTTCCATCACTATATT+TGG 0.170826 5_2:+19127475 None:intergenic
GCTCTAACACTATTATATTT+TGG 0.176190 5_2:+19116730 None:intergenic
TCAATAGCTGGAAGTTTAAT+TGG 0.184530 5_2:-19117216 Msa0761640:CDS
TATAGTCCTCTTCGACATTT+TGG 0.197168 5_2:-19117786 Msa0761640:CDS
TTCTTTGGATGCTCAAATTC+AGG 0.236168 5_2:+19128220 None:intergenic
TATCGATTCGTGATTGATAT+TGG 0.245698 5_2:-19117066 Msa0761640:CDS
GCCCAACCAAATGCCTTCTT+TGG 0.249082 5_2:+19128205 None:intergenic
CCCCTTTCCATTTCTTTAGA+AGG 0.260521 5_2:-19118963 Msa0761640:intron
GTGAAATTTGCTAAAGCTTT+TGG 0.271062 5_2:-19117702 Msa0761640:CDS
ATTGGTTTATTGAAATCTAA+TGG 0.271827 5_2:-19117416 Msa0761640:CDS
AATTAGTACATCGCCTAAAA+AGG 0.289281 5_2:-19117664 Msa0761640:CDS
TCTTGGTGGACTTGGTCATA+TGG 0.309264 5_2:-19117727 Msa0761640:CDS
GCCCATCCAAAGGCTTTCTT+AGG 0.319650 5_2:+19119012 None:intergenic
TGAATGTTTGAGTATATTTA+GGG 0.324279 5_2:+19117949 None:intergenic
TCTTGGTGGACTTGGCCATA+TGG 0.337845 5_2:-19127279 Msa0761640:CDS
TACGAACTATCCACTAGTTC+CGG 0.344610 5_2:-19127760 Msa0761640:CDS
AAATACAGGCACGAACTTAC+AGG 0.345327 5_2:-19118095 Msa0761640:intron
TTTAGGCGATGTACTAATTA+CGG 0.366491 5_2:+19117668 None:intergenic
CGGACGAGCACTTTGTGTTT+CGG 0.369545 5_2:-19127421 Msa0761640:intron
GTGAAATTTGCCAAAGCCTT+TGG 0.370310 5_2:-19127254 Msa0761640:CDS
GTTGTTGGTCTTGGTGGACT+TGG 0.372585 5_2:-19127287 Msa0761640:CDS
AAGTTTAATTGGAGGGATAA+AGG 0.373525 5_2:-19117205 Msa0761640:CDS
CACATTAGCACCAAAGGCTT+TGG 0.375006 5_2:+19127244 None:intergenic
CATCAAAACTTCAGGGAAAC+AGG 0.379283 5_2:-19118429 Msa0761640:intron
GAGCATCCAAAGAAGGCATT+TGG 0.380999 5_2:-19128211 Msa0761640:CDS
ACCATCAGTGAGTGTCAATT+GGG 0.382344 5_2:+19127499 None:intergenic
AAACCAATCAATGGTAAAAC+AGG 0.382671 5_2:+19117431 None:intergenic
TATTATAATATAGTTTGAAA+TGG 0.383528 5_2:-19119064 Msa0761640:intron
GTGTTTCCTAAGAAAGCCTT+TGG 0.390933 5_2:-19119018 Msa0761640:CDS
AAGTGAACCTTCTAAAGAAA+TGG 0.391377 5_2:+19118956 None:intergenic
ATAGGAATGATCTCAATATC+AGG 0.391852 5_2:+19126562 None:intergenic
AAAACATACCCCGGGACTAA+TGG 0.397804 5_2:+19118315 None:intergenic
AACCATCAGTGAGTGTCAAT+TGG 0.401417 5_2:+19127498 None:intergenic
TTTAAAGTTGGAGACAAAGT+AGG 0.401632 5_2:-19118038 Msa0761640:CDS
GTTGTTGGTCTTGGTGGACT+TGG 0.406204 5_2:-19117735 Msa0761640:CDS
ATAGGTGTTGTTGGTCTTGG+TGG 0.407624 5_2:-19127293 Msa0761640:CDS
CCCCTTTCAATTTCTCCAGA+AGG 0.415467 5_2:-19128156 Msa0761640:intron
AAATGTACCTGCATCTGATC+TGG 0.416120 5_2:+19117588 None:intergenic
AATATAGGTGTTGTTGGTCT+TGG 0.416186 5_2:-19127296 Msa0761640:CDS
CCAAGCCCTTAAAACATTGC+AGG 0.416443 5_2:-19117030 Msa0761640:exon
GCATCAAGAGGTAACTCATC+TGG 0.417564 5_2:+19127395 None:intergenic
ATAGGAGTTGTTGGTCTTGG+TGG 0.419786 5_2:-19117741 Msa0761640:CDS
TGGGCAGCTAGGGACTCTTC+TGG 0.423900 5_2:-19118994 Msa0761640:CDS
ACGAACTATCCACTAGTTCC+GGG 0.427510 5_2:-19127759 Msa0761640:CDS
CGCGATGGCACCATCACCTA+TGG 0.430946 5_2:-19117915 Msa0761640:CDS
TTCACATTATGCAGAATGAA+TGG 0.433959 5_2:-19118353 Msa0761640:CDS
TGGGCAGCTAGAGACTCTTC+TGG 0.441511 5_2:-19128187 Msa0761640:CDS
CATTCAAGGTGTTGTATTGT+GGG 0.442854 5_2:-19118392 Msa0761640:CDS
TTAAAGTTGGAGACAAAGTA+GGG 0.443890 5_2:-19118037 Msa0761640:CDS
TGGCAAATTTCACAGCCATA+TGG 0.446571 5_2:+19127264 None:intergenic
TCCAAAGAAGGCATTTGGTT+GGG 0.449991 5_2:-19128206 Msa0761640:CDS
TTCATAAGGCGAAGAATGAA+TGG 0.450733 5_2:-19127788 Msa0761640:CDS
TGAGAAAGATGTAGCATTCA+AGG 0.455978 5_2:-19118406 Msa0761640:CDS
GGTATGAATATAGGTGTTGT+TGG 0.459605 5_2:-19127302 Msa0761640:CDS
GTAGGGAGAAAGATAGTGGC+TGG 0.463044 5_2:-19126652 Msa0761640:intron
ATATACAGACATGAAATTGT+TGG 0.463799 5_2:-19127647 Msa0761640:intron
TCACATTATGCAGAATGAAT+GGG 0.468998 5_2:-19118352 Msa0761640:CDS
GGTATGAATATAGGAGTTGT+TGG 0.473313 5_2:-19117750 Msa0761640:CDS
AACCTTCTGGAGAAATTGAA+AGG 0.475349 5_2:+19128154 None:intergenic
CAAAGTAGGGGTGGGATACA+TGG 0.477101 5_2:-19118024 Msa0761640:CDS
AATATAGGAGTTGTTGGTCT+TGG 0.479644 5_2:-19117744 Msa0761640:CDS
GCTGTGTTGACGTAATCAAT+AGG 0.480301 5_2:+19126544 None:intergenic
ACCTTCTGGAGAAATTGAAA+GGG 0.480545 5_2:+19128155 None:intergenic
AAATATACTCAAACATTCAA+TGG 0.481148 5_2:-19117945 Msa0761640:CDS
CCTCCAAGTAAAGAAAATAC+AGG 0.487127 5_2:+19117350 None:intergenic
GATTTCAATAAACCAATCAA+TGG 0.487235 5_2:+19117422 None:intergenic
CAATGTAACTCCTGAGATTG+AGG 0.489775 5_2:-19117148 Msa0761640:CDS
TCATAAGGCGAAGAATGAAT+GGG 0.490720 5_2:-19127787 Msa0761640:CDS
ATTCATTCTTCGCCTTATGA+AGG 0.497579 5_2:+19127790 None:intergenic
GTAGGGAGAAAGTCAATAGC+TGG 0.498727 5_2:-19117228 Msa0761640:intron
GCTGCTCCTCTCCTTTGTGC+TGG 0.498766 5_2:-19127371 Msa0761640:CDS
AACCACCTATCCATTAGTCC+CGG 0.500566 5_2:-19118325 Msa0761640:CDS
TTCCTAAGAAAGCCTTTGGA+TGG 0.501309 5_2:-19119014 Msa0761640:CDS
GACAAGCCTGGTATGAATAT+AGG 0.503872 5_2:-19117759 Msa0761640:CDS
ATAGGAACAACCTCAATCTC+AGG 0.503943 5_2:+19117138 None:intergenic
ATGTCACTCGGACCTTCATA+AGG 0.505748 5_2:-19127802 Msa0761640:CDS
CAGAGTAGGTGTCGGATGCT+TGG 0.505785 5_2:-19127576 Msa0761640:CDS
AACCTTCTAAAGAAATGGAA+AGG 0.507463 5_2:+19118961 None:intergenic
ATAGTGGCTGGAAGTTTGAT+TGG 0.509085 5_2:-19126640 Msa0761640:CDS
AAGCCTTTGGATGGGCAGCT+AGG 0.509276 5_2:-19119005 Msa0761640:CDS
GACAAGCCTGGTATGAATAT+AGG 0.509901 5_2:-19127311 Msa0761640:CDS
AGCCTTTGGATGGGCAGCTA+GGG 0.516328 5_2:-19119004 Msa0761640:CDS
GCAATGGAGCGTCTTGCTAA+AGG 0.517863 5_2:-19117099 Msa0761640:CDS
TCTAAAATCTAAAATACCAT+TGG 0.519293 5_2:+19116940 None:intergenic
ATTGGTTTACTCAAGTCTCA+TGG 0.521108 5_2:-19126855 Msa0761640:intron
GCATTCAAGGTGTTGTATTG+TGG 0.522756 5_2:-19118393 Msa0761640:CDS
ACCTTCTAAAGAAATGGAAA+GGG 0.523495 5_2:+19118962 None:intergenic
AGAAAAGCCACCATGAGTGC+TGG 0.530485 5_2:+19127457 None:intergenic
ATCCAAAGAAGGCATTTGGT+TGG 0.531418 5_2:-19128207 Msa0761640:CDS
ATATATATACCTGCAAGTAA+AGG 0.531437 5_2:+19126780 None:intergenic
TGAATTTGAGCATCCAAAGA+AGG 0.538083 5_2:-19128218 Msa0761640:CDS
ACCACCTATCCATTAGTCCC+GGG 0.540962 5_2:-19118324 Msa0761640:CDS
AAAGTGAGCAAGTTCAAAGT+TGG 0.541588 5_2:-19127602 Msa0761640:CDS
AGTGATGGAACCAGCACTCA+TGG 0.542579 5_2:-19127467 Msa0761640:CDS
AAAGCTTACCCCGGAACTAG+TGG 0.544688 5_2:+19127750 None:intergenic
GCATTAAAAGTGTTGTATTG+TGG 0.545788 5_2:-19127828 Msa0761640:CDS
GAAAATACAGGAAGCTCTAG+AGG 0.546279 5_2:+19117362 None:intergenic
ATTGGTAGGGAGAAAGATAG+TGG 0.553404 5_2:-19126656 Msa0761640:intron
AGTTGGAGACAAAGTAGGGG+TGG 0.553693 5_2:-19118033 Msa0761640:CDS
GTCTCATGGAAAGCTTGTAA+TGG 0.559201 5_2:-19126841 Msa0761640:CDS
CCCCAATTGACACTCACTGA+TGG 0.559334 5_2:-19127500 Msa0761640:CDS
TGGCTGGAAGTTTGATTGGT+GGG 0.560766 5_2:-19126636 Msa0761640:CDS
TACGGTCACATTAGCACCAA+AGG 0.563794 5_2:+19127238 None:intergenic
TCCTAAGAAAGCCTTTGGAT+GGG 0.565194 5_2:-19119013 Msa0761640:CDS
TAGCTGGAAGTTTAATTGGA+GGG 0.567406 5_2:-19117212 Msa0761640:CDS
GTTGGCATAGTTACAGAAGT+GGG 0.578876 5_2:-19127629 Msa0761640:CDS
GTCCCTAGCTGCCCATCCAA+AGG 0.583346 5_2:+19119002 None:intergenic
GTGGCTGGAAGTTTGATTGG+TGG 0.585158 5_2:-19126637 Msa0761640:CDS
GCTGCAACGAGTACTTTGAA+TGG 0.585867 5_2:-19117482 Msa0761640:CDS
ATCTAATGGAAAGCTTGTAA+TGG 0.587781 5_2:-19117402 Msa0761640:CDS
CGATTATGTCAACACAGCAA+TGG 0.588395 5_2:-19117115 Msa0761640:CDS
ATAGCTGGAAGTTTAATTGG+AGG 0.588996 5_2:-19117213 Msa0761640:CDS
TGTTGGCATAGTTACAGAAG+TGG 0.590305 5_2:-19127630 Msa0761640:CDS
TCACACAAGTACAACAAAGA+GGG 0.592618 5_2:+19116914 None:intergenic
GATGGTTCCAAATATAGTGA+TGG 0.592641 5_2:-19127482 Msa0761640:CDS
AAGGAAGCAATAGAACACTT+AGG 0.595080 5_2:-19117639 Msa0761640:CDS
CCGCGATCCAGATCAGATGC+AGG 0.596450 5_2:-19117595 Msa0761640:intron
CACATTATGCAGAATGAATG+GGG 0.597941 5_2:-19118351 Msa0761640:CDS
GGAGAAACCTCCATAGGTGA+TGG 0.604248 5_2:+19117905 None:intergenic
CATGGAAAGCTTGTAATGGT+TGG 0.604281 5_2:-19126837 Msa0761640:CDS
GTTGGAGACAAAGTAGGGGT+GGG 0.608564 5_2:-19118032 Msa0761640:CDS
ATTTCACATCTGCTTTAAGG+AGG 0.611618 5_2:+19126512 None:intergenic
TTCAATGGTAAGTATCGCGA+TGG 0.612763 5_2:-19117930 Msa0761640:CDS
ATCACACAAGTACAACAAAG+AGG 0.614153 5_2:+19116913 None:intergenic
ATACCCCGGGACTAATGGAT+AGG 0.615005 5_2:+19118320 None:intergenic
AATGGAAAGCTTGTAATGGT+TGG 0.618001 5_2:-19117398 Msa0761640:CDS
CCCCGGGACTAATGGATAGG+TGG 0.620100 5_2:+19118323 None:intergenic
GTAATACCAGCACAAAGGAG+AGG 0.623289 5_2:+19127365 None:intergenic
ATTCATTCTGCATAATGTGA+AGG 0.626134 5_2:+19118355 None:intergenic
TGATTACGTCAACACAGCGA+TGG 0.626468 5_2:-19126539 Msa0761640:CDS
CCTTCTAAAGAAATGGAAAG+GGG 0.632604 5_2:+19118963 None:intergenic
TACAGGTGTAGTAACAGAGG+TGG 0.634996 5_2:-19118078 Msa0761640:CDS
AGAGGAGCAGCAGCATCAAG+AGG 0.635270 5_2:+19127383 None:intergenic
TCGAGTTCAAAATGTCGAAG+AGG 0.636928 5_2:+19127332 None:intergenic
TTCAAAGTTGGAGACAGAGT+AGG 0.639117 5_2:-19127590 Msa0761640:CDS
TCGAGTCCAAAATGTCGAAG+AGG 0.639224 5_2:+19117780 None:intergenic
TGAGTCGGAGAAACCTCCAT+AGG 0.648832 5_2:+19117899 None:intergenic
GTTGGAGACAGAGTAGGTGT+CGG 0.649941 5_2:-19127584 Msa0761640:CDS
ACAGGTGTAGTAACAGAGGT+GGG 0.650453 5_2:-19118077 Msa0761640:CDS
GCTGTGTTGACATAATCGAT+AGG 0.651012 5_2:+19117120 None:intergenic
ACAACACCTATATTCATACC+AGG 0.652836 5_2:+19127305 None:intergenic
CCTTCTGGAGAAATTGAAAG+GGG 0.653235 5_2:+19128156 None:intergenic
TAAAGTTGGAGACAAAGTAG+GGG 0.656574 5_2:-19118036 Msa0761640:CDS
CCATCAGTGAGTGTCAATTG+GGG 0.658178 5_2:+19127500 None:intergenic
ACAACTCCTATATTCATACC+AGG 0.664201 5_2:+19117753 None:intergenic
GATGGCACCATCACCTATGG+AGG 0.673821 5_2:-19117912 Msa0761640:intron
CCACCTATCCATTAGTCCCG+GGG 0.685161 5_2:-19118323 Msa0761640:intron
CATAAGGCGAAGAATGAATG+GGG 0.693942 5_2:-19127786 Msa0761640:CDS
CCTGCATCTGATCTGGATCG+CGG 0.694160 5_2:+19117595 None:intergenic
CGAACTATCCACTAGTTCCG+GGG 0.700828 5_2:-19127758 Msa0761640:intron
ACACAGTAATACCAGCACAA+AGG 0.710961 5_2:+19127360 None:intergenic
ACTTACAGGTGTAGTAACAG+AGG 0.711676 5_2:-19118081 Msa0761640:CDS
GATGGAACCAGCACTCATGG+TGG 0.728708 5_2:-19127464 Msa0761640:CDS
GTATTGTGGAATATGTCACT+CGG 0.739362 5_2:-19127814 Msa0761640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATTTTAATATATTTA+GGG - chr5_2:19120624-19120643 Msa0761640:intron 0.0%
!! AATTTAAAAAAATAAAAAAA+TGG - chr5_2:19122007-19122026 Msa0761640:intron 0.0%
!! ATAGTAATATAAATTGAATA+TGG + chr5_2:19117071-19117090 None:intergenic 10.0%
!!! ATATTTTGATTTATATGTTT+GGG + chr5_2:19117254-19117273 None:intergenic 10.0%
!!! TATATTTTGATTTATATGTT+TGG + chr5_2:19117255-19117274 None:intergenic 10.0%
!!! TTTAATTTAAACATTTAGAA+GGG + chr5_2:19118244-19118263 None:intergenic 10.0%
!!! ATTTAATTTAAACATTTAGA+AGG + chr5_2:19118245-19118264 None:intergenic 10.0%
!! AATAAATAAATGTATATAAG+TGG + chr5_2:19119846-19119865 Msa0761650:intron 10.0%
!!! AAAAACAAAAAAATTTTACA+GGG + chr5_2:19121810-19121829 None:intergenic 10.0%
!!! TAAAAACAAAAAAATTTTAC+AGG + chr5_2:19121811-19121830 None:intergenic 10.0%
!!! TTTTTGAAATATGAAAAAAA+TGG - chr5_2:19122097-19122116 Msa0761640:intron 10.0%
!!! TTTTGAAAAATGAAAAAAAA+TGG - chr5_2:19122134-19122153 Msa0761640:intron 10.0%
!! TAAAAATTAGAAAAAAAATC+TGG + chr5_2:19122394-19122413 None:intergenic 10.0%
!!! AAAAAGAATTTTCAAAATTT+TGG - chr5_2:19122452-19122471 Msa0761640:intron 10.0%
!!! TTTTTGAAATATGAAAAAAA+TGG + chr5_2:19122097-19122116 None:intergenic 10.0%
!! CTGAAAATAATTTAAAAAAA+TGG + chr5_2:19122731-19122750 None:intergenic 10.0%
!!! TATTTTCAGATTTTTTAATT+TGG - chr5_2:19122742-19122761 Msa0761640:intron 10.0%
!!! TAAAACAAAAATTTTTTTAC+AGG - chr5_2:19122919-19122938 Msa0761640:intron 10.0%
!!! AAAACAAAAATTTTTTTACA+GGG - chr5_2:19122920-19122939 Msa0761640:intron 10.0%
!! AAAAAAAAATATTTGGAAAA+TGG + chr5_2:19123235-19123254 None:intergenic 10.0%
!! ATGGAAAAAAAAAAAATATT+TGG + chr5_2:19123242-19123261 None:intergenic 10.0%
!! TCTGTTTAAATAAAAAAATA+AGG + chr5_2:19124755-19124774 None:intergenic 10.0%
!!! ATTTTTTTAAAAAAGAAGAA+AGG - chr5_2:19125629-19125648 Msa0761640:intron 10.0%
!! TATTATAATATAGTTTGAAA+TGG - chr5_2:19125890-19125909 Msa0761640:intron 10.0%
!!! AATTGTATATACTATTTTTT+TGG + chr5_2:19126249-19126268 None:intergenic 10.0%
!! TAAAATAATTGATAAAGTAA+AGG + chr5_2:19126754-19126773 None:intergenic 10.0%
!! ATATTATGTTTAGAAAGAAA+AGG + chr5_2:19116846-19116865 None:intergenic 15.0%
!! AAATTCAATTTGATTCTAAT+TGG - chr5_2:19117274-19117293 Msa0761640:intron 15.0%
!! TATTTCGGATAATAATTTAA+TGG - chr5_2:19118531-19118550 Msa0761640:intron 15.0%
!! TAATAAAATGTAGTAGTTTA+TGG - chr5_2:19118571-19118590 Msa0761640:intron 15.0%
!!! AAATATTTTTTTTTTTGTGG+TGG + chr5_2:19119031-19119050 None:intergenic 15.0%
!!! AATATAGCTTATATTTGTTA+GGG + chr5_2:19119688-19119707 Msa0761650:five_prime_UTR 15.0%
!!! ATTAAAGTTTTAGTTTGTTA+TGG + chr5_2:19119731-19119750 Msa0761650:five_prime_UTR 15.0%
!!! AGTTACCATTTTTTTTTTTT+GGG - chr5_2:19120042-19120061 Msa0761640:intron 15.0%
!!! GGTTCTTTTATTTTAATAAA+TGG + chr5_2:19120436-19120455 Msa0761650:intron 15.0%
!! TAAAAAGAGAATAAAAACTA+GGG + chr5_2:19120610-19120629 Msa0761650:intron 15.0%
!! ATAAAAAGAGAATAAAAACT+AGG + chr5_2:19120611-19120630 Msa0761650:intron 15.0%
!! ATGAATTTGATAAACAATTA+AGG + chr5_2:19121080-19121099 None:intergenic 15.0%
!! TATCAAATTCATACTTATAA+TGG - chr5_2:19121088-19121107 Msa0761640:intron 15.0%
!!! GAAATAATTATTTCCTTTTA+TGG + chr5_2:19121438-19121457 None:intergenic 15.0%
!!! TCTGTTTTTCTTTTTTTAAA+CGG + chr5_2:19121639-19121658 None:intergenic 15.0%
!!! TATTTTTTTTTCGAAAAATG+TGG - chr5_2:19122213-19122232 Msa0761640:intron 15.0%
!!! AAAAATCTGGAAAAAAATTT+TGG + chr5_2:19122381-19122400 None:intergenic 15.0%
!!! TTTTAACTTGATTTAAAACT+TGG + chr5_2:19123024-19123043 None:intergenic 15.0%
!! AGTGTTAATATGTAATAATA+AGG - chr5_2:19123095-19123114 Msa0761640:intron 15.0%
!!! TATTTATTTTGTTGATATCA+TGG + chr5_2:19123682-19123701 None:intergenic 15.0%
!!! TAATAAAATAATGTTTTGGT+GGG + chr5_2:19124049-19124068 None:intergenic 15.0%
!!! AGAGTAATAAAATAATGTTT+TGG + chr5_2:19124053-19124072 None:intergenic 15.0%
!! AGAATTAATTAAAATGTCTT+TGG + chr5_2:19124111-19124130 None:intergenic 15.0%
!!! TCTTTTATGTTTTATTGTTT+AGG + chr5_2:19124492-19124511 None:intergenic 15.0%
!! ATAAACAATAAATCGAAAAA+GGG - chr5_2:19124946-19124965 Msa0761640:intron 15.0%
!!! TGTACAATTTTTTGTTTTTT+TGG + chr5_2:19124977-19124996 None:intergenic 15.0%
!! TACAAAAAAAAAATCGAAAA+AGG - chr5_2:19124993-19125012 Msa0761640:intron 15.0%
!! ACAAAAAAAAAATCGAAAAA+GGG - chr5_2:19124994-19125013 Msa0761640:intron 15.0%
!! AATGAATAGATTGAAAAAAA+GGG - chr5_2:19125369-19125388 Msa0761640:intron 15.0%
!!! AAATTTGTGTTAGTTTTATT+TGG - chr5_2:19126156-19126175 Msa0761640:intron 15.0%
!! TAAACTATAATAGAAGTTAA+AGG + chr5_2:19126670-19126689 None:intergenic 15.0%
!!! AAAGTAAAAAAGTTTAAAGT+TGG - chr5_2:19126904-19126923 Msa0761640:intron 15.0%
!! ACATTTCATTTGATTAATTT+CGG - chr5_2:19127383-19127402 Msa0761640:CDS 15.0%
!! AAATAACATCATGAAAAAAG+TGG - chr5_2:19116981-19117000 Msa0761640:three_prime_UTR 20.0%
!!! TATGTTTGGGTTTTTTTAAA+TGG + chr5_2:19117241-19117260 None:intergenic 20.0%
!! TTTAGATGATGTACTAATTA+CGG + chr5_2:19117737-19117756 None:intergenic 20.0%
!! AATTAGTACATCATCTAAAA+AGG - chr5_2:19117738-19117757 Msa0761640:CDS 20.0%
!!! ATCAATCTAGAATAATTTGT+AGG - chr5_2:19118011-19118030 Msa0761640:CDS 20.0%
!!! TATTGTTGTTATATCATTTC+TGG - chr5_2:19118642-19118661 Msa0761640:intron 20.0%
!!! TAATTTAGCTTCTTCAATTT+AGG + chr5_2:19119142-19119161 None:intergenic 20.0%
!!! TTGTTATTATGCATTTACTT+TGG + chr5_2:19119359-19119378 None:intergenic 20.0%
!! ATGTAACAATCATTATGAAA+CGG + chr5_2:19119411-19119430 None:intergenic 20.0%
!! GAATATAGCTTATATTTGTT+AGG + chr5_2:19119689-19119708 Msa0761650:five_prime_UTR 20.0%
!! ACAAATATAAGCTATATTCT+AGG - chr5_2:19119690-19119709 Msa0761640:intron 20.0%
!!! GAGTTACCATTTTTTTTTTT+TGG - chr5_2:19120041-19120060 Msa0761640:intron 20.0%
!! TTCATCCCAAAAAAAAAAAA+TGG + chr5_2:19120050-19120069 Msa0761650:intron 20.0%
!! AAATAACGTCAATATTGTTA+AGG + chr5_2:19120186-19120205 Msa0761650:intron 20.0%
!! AATCACGATTATGATTTATT+TGG + chr5_2:19120246-19120265 Msa0761650:intron 20.0%
!!! AGTGTTTTTTACTATTAAAG+TGG + chr5_2:19120299-19120318 Msa0761650:exon 20.0%
!! AAAAAGAGAATAAAAACTAG+GGG + chr5_2:19120609-19120628 Msa0761650:intron 20.0%
!!! TCTTTTCCTTGTTTTTTTAA+AGG + chr5_2:19120951-19120970 None:intergenic 20.0%
!! TTAAAAAAACAAGGAAAAGA+TGG - chr5_2:19120951-19120970 Msa0761640:intron 20.0%
!! TTACATAATTTACCAAGTAT+TGG + chr5_2:19121280-19121299 None:intergenic 20.0%
!! TAAAACACAATTACCATAAA+AGG - chr5_2:19121422-19121441 Msa0761640:intron 20.0%
!!! TTTATTTTTCGTTTCATGAA+AGG + chr5_2:19121687-19121706 None:intergenic 20.0%
!!! AAATTAGTGTCAAAATTTTC+AGG - chr5_2:19123164-19123183 Msa0761640:intron 20.0%
!!! AATTAGTGTCAAAATTTTCA+GGG - chr5_2:19123165-19123184 Msa0761640:intron 20.0%
!!! TTTTTTTTTCCATATATGAG+AGG - chr5_2:19123249-19123268 Msa0761640:intron 20.0%
!! TAGGTCTAAGAAATAATTAT+AGG - chr5_2:19123287-19123306 Msa0761640:intron 20.0%
!! AAATTGGTAAAGTTCAAAAT+TGG - chr5_2:19123418-19123437 Msa0761640:intron 20.0%
!! ATATGTCACAATTACATTTA+CGG - chr5_2:19123493-19123512 Msa0761640:intron 20.0%
!!! AAGTAAGTTTTTACATATAC+AGG - chr5_2:19123797-19123816 Msa0761640:intron 20.0%
!! ATATATTAATATGAATGGTC+TGG - chr5_2:19123963-19123982 Msa0761640:intron 20.0%
!!! AATAAAATAATGTTTTGGTG+GGG + chr5_2:19124048-19124067 None:intergenic 20.0%
!!! GTAATAAAATAATGTTTTGG+TGG + chr5_2:19124050-19124069 None:intergenic 20.0%
!!! ATTTTATTACTCTTATGTTG+TGG - chr5_2:19124060-19124079 Msa0761640:intron 20.0%
!!! TTTTATTACTCTTATGTTGT+GGG - chr5_2:19124061-19124080 Msa0761640:intron 20.0%
!! TTTAGAAGACATATTATGTT+GGG - chr5_2:19124085-19124104 Msa0761640:intron 20.0%
!! TTTAATTAATTCTGCAAAGT+TGG - chr5_2:19124118-19124137 Msa0761640:intron 20.0%
!! TTAATTAATTCTGCAAAGTT+GGG - chr5_2:19124119-19124138 Msa0761640:intron 20.0%
!! AAAATAAAGAGGGATTAATT+TGG + chr5_2:19124145-19124164 None:intergenic 20.0%
!!! TGTTTTATTGTTTAGGTTAT+GGG + chr5_2:19124485-19124504 None:intergenic 20.0%
!!! ATGTTTTATTGTTTAGGTTA+TGG + chr5_2:19124486-19124505 None:intergenic 20.0%
!! AGTATTATAGCAATAATTGA+AGG + chr5_2:19124848-19124867 None:intergenic 20.0%
!!! TACAACTATAATCGTTTTTA+TGG + chr5_2:19124911-19124930 None:intergenic 20.0%
!! CATAAACAATAAATCGAAAA+AGG - chr5_2:19124945-19124964 Msa0761640:intron 20.0%
!!! TGTTATAATTTTTATTCTGC+TGG + chr5_2:19125075-19125094 None:intergenic 20.0%
!! GAATGAATAGATTGAAAAAA+AGG - chr5_2:19125368-19125387 Msa0761640:intron 20.0%
!! ACTTTATGAAGATATTTGTA+AGG + chr5_2:19125802-19125821 None:intergenic 20.0%
!! AATGTATTAAATTAGTGAAG+AGG + chr5_2:19126033-19126052 None:intergenic 20.0%
!!! ACCTTTCTTTGAAATTAAAA+GGG + chr5_2:19126093-19126112 None:intergenic 20.0%
!!! TACCTTTCTTTGAAATTAAA+AGG + chr5_2:19126094-19126113 None:intergenic 20.0%
!! TGATGAGTAAAATAAAATGT+TGG + chr5_2:19126282-19126301 None:intergenic 20.0%
!! ATGTGACAATTAAAAAGAAA+CGG + chr5_2:19126698-19126717 None:intergenic 20.0%
!! TAGAAAATAATTGCTCAATT+TGG - chr5_2:19126820-19126839 Msa0761640:CDS 20.0%
!! ATAACTGATGTAATAAATAC+AGG - chr5_2:19126845-19126864 Msa0761640:intron 20.0%
!! TGAATGTTTGAGTATATTTA+GGG + chr5_2:19127008-19127027 None:intergenic 20.0%
!! TTGAATGTTTGAGTATATTT+AGG + chr5_2:19127009-19127028 None:intergenic 20.0%
!! AAATATACTCAAACATTCAA+TGG - chr5_2:19127009-19127028 Msa0761640:intron 20.0%
!! AATATTGTACAACATTTCAT+AGG - chr5_2:19127450-19127469 Msa0761640:CDS 20.0%
!!! ATTGGTTTATTGAAATCTAA+TGG - chr5_2:19127538-19127557 Msa0761640:CDS 20.0%
!! TTGTATTAATTTCGCATTAT+TGG - chr5_2:19127704-19127723 Msa0761640:intron 20.0%
!!! TCTAAAATCTAAAATACCAT+TGG + chr5_2:19128017-19128036 None:intergenic 20.0%
! GAAAAAGTGAGCAAATAAAA+TGG + chr5_2:19116895-19116914 None:intergenic 25.0%
! ATGCTTTACATTTGTTTGTA+AGG - chr5_2:19116921-19116940 Msa0761640:three_prime_UTR 25.0%
! TCGTCAAAATTAGTAGAAAT+AGG + chr5_2:19116955-19116974 None:intergenic 25.0%
! TATTACTATGTCAAATTTCC+AGG - chr5_2:19117082-19117101 Msa0761640:CDS 25.0%
! ATTACTATGTCAAATTTCCA+GGG - chr5_2:19117083-19117102 Msa0761640:CDS 25.0%
! ATATACAGACATGAAATTGT+TGG - chr5_2:19117307-19117326 Msa0761640:intron 25.0%
! TACATCATCTAAAAAGGAAA+AGG - chr5_2:19117744-19117763 Msa0761640:CDS 25.0%
! TATAGTTGCTTATTTAGAGA+CGG - chr5_2:19117866-19117885 Msa0761640:intron 25.0%
! CTAATTGTCAACTTCTAAAT+CGG + chr5_2:19117984-19118003 None:intergenic 25.0%
! ATATATATACCTGCAAGTAA+AGG + chr5_2:19118177-19118196 None:intergenic 25.0%
! TGAAATACTTGTGAGTTTAA+AGG + chr5_2:19118274-19118293 None:intergenic 25.0%
! TCACAAGTATTTCACATTAT+TGG - chr5_2:19118280-19118299 Msa0761640:intron 25.0%
! AAGTATTTCACATTATTGGT+AGG - chr5_2:19118284-19118303 Msa0761640:intron 25.0%
! AGTATTTCACATTATTGGTA+GGG - chr5_2:19118285-19118304 Msa0761640:intron 25.0%
!!! TATCGATTTGTGATTGATAT+TGG - chr5_2:19118464-19118483 Msa0761640:intron 25.0%
! TAAAATCAAGCTCTTGAATT+TGG - chr5_2:19118495-19118514 Msa0761640:intron 25.0%
! GGCAGAATATTCAAATATTT+CGG - chr5_2:19118516-19118535 Msa0761640:intron 25.0%
! AGATTTATATCTCTTGTAAC+AGG + chr5_2:19118717-19118736 None:intergenic 25.0%
! ACAATGCATAAAAATATGCA+AGG - chr5_2:19118986-19119005 Msa0761640:CDS 25.0%
! AGGTTCCAATTTGATTAAAA+TGG - chr5_2:19119293-19119312 Msa0761640:intron 25.0%
! TTGATCAACAAGTTATGATT+AGG - chr5_2:19119500-19119519 Msa0761640:intron 25.0%
! TGATCAACAAGTTATGATTA+GGG - chr5_2:19119501-19119520 Msa0761640:intron 25.0%
! CTAAATTTAGTTGACACATT+TGG + chr5_2:19120014-19120033 Msa0761650:intron 25.0%
! GTCAACTAAATTTAGATGAA+AGG - chr5_2:19120019-19120038 Msa0761640:intron 25.0%
! TGTTAAGGCAAAATTGTATT+AGG + chr5_2:19120171-19120190 Msa0761650:intron 25.0%
! ACGATTATGATTTATTTGGT+TGG + chr5_2:19120242-19120261 Msa0761650:intron 25.0%
! GGAAGATAATTCAAGAAAAA+GGG + chr5_2:19120278-19120297 Msa0761650:intron 25.0%
! TGGAAGATAATTCAAGAAAA+AGG + chr5_2:19120279-19120298 Msa0761650:intron 25.0%
! TAAAAAACACTACAACAAGA+CGG - chr5_2:19120308-19120327 Msa0761640:intron 25.0%
! TGGAGAAATCACTTAAAAAA+TGG - chr5_2:19120383-19120402 Msa0761640:intron 25.0%
! GGAGAAATCACTTAAAAAAT+GGG - chr5_2:19120384-19120403 Msa0761640:intron 25.0%
! GAGAAATCACTTAAAAAATG+GGG - chr5_2:19120385-19120404 Msa0761640:intron 25.0%
! AGAAATCACTTAAAAAATGG+GGG - chr5_2:19120386-19120405 Msa0761640:intron 25.0%
! GGGGAAAAAAATCAAATATA+CGG - chr5_2:19120405-19120424 Msa0761640:intron 25.0%
! GGGAAAAAAATCAAATATAC+GGG - chr5_2:19120406-19120425 Msa0761640:intron 25.0%
! GGAAAAAAATCAAATATACG+GGG - chr5_2:19120407-19120426 Msa0761640:intron 25.0%
! GAAAAAAATCAAATATACGG+GGG - chr5_2:19120408-19120427 Msa0761640:intron 25.0%
! AAAAGAGAATAAAAACTAGG+GGG + chr5_2:19120608-19120627 Msa0761650:intron 25.0%
!!! ATTTTTGGCATCTTTTTCAT+TGG + chr5_2:19120774-19120793 None:intergenic 25.0%
! AATGAAAAAGATGCCAAAAA+TGG - chr5_2:19120773-19120792 Msa0761640:intron 25.0%
!! TCTATGCCTTTAAAAAAACA+AGG - chr5_2:19120942-19120961 Msa0761640:intron 25.0%
! TTAACAAAACTTCCAATACT+TGG - chr5_2:19121265-19121284 Msa0761640:intron 25.0%
! CTAAAAGACACCTTTATAAA+AGG + chr5_2:19121485-19121504 None:intergenic 25.0%
!!! TTTTGTTTTAAAAAGGTCTC+TGG + chr5_2:19122909-19122928 None:intergenic 25.0%
! GAAACAAGTGAAAAAGATAT+AGG - chr5_2:19123187-19123206 Msa0761640:intron 25.0%
! GTCTAAGAAATAATTATAGG+AGG - chr5_2:19123290-19123309 Msa0761640:intron 25.0%
!!! CTTAGAAATACCTACTTTTT+TGG + chr5_2:19123630-19123649 None:intergenic 25.0%
!! TTTTGTTGATATCATGGTAA+AGG + chr5_2:19123676-19123695 None:intergenic 25.0%
! ATAATAAAAGACTCTACCTT+AGG - chr5_2:19123699-19123718 Msa0761640:intron 25.0%
! TAATAAAAGACTCTACCTTA+GGG - chr5_2:19123700-19123719 Msa0761640:intron 25.0%
!!! TTTTAAGAATATCAAGCAAG+AGG + chr5_2:19124015-19124034 None:intergenic 25.0%
!! CTTTAGAAGACATATTATGT+TGG - chr5_2:19124084-19124103 Msa0761640:intron 25.0%
! GTGAAAAACGAAAATAAAGA+GGG + chr5_2:19124155-19124174 None:intergenic 25.0%
! AGTGAAAAACGAAAATAAAG+AGG + chr5_2:19124156-19124175 None:intergenic 25.0%
!!! CTTTATTTTCGTTTTTCACT+TGG - chr5_2:19124156-19124175 Msa0761640:intron 25.0%
! AACAATTCATGTATGAACAA+AGG + chr5_2:19124236-19124255 None:intergenic 25.0%
!!! GTTTTATTGTTTAGGTTATG+GGG + chr5_2:19124484-19124503 None:intergenic 25.0%
! TGTTAATTACGAAGCTAATA+AGG + chr5_2:19124547-19124566 None:intergenic 25.0%
!!! ATTTTTGAAGAAGCTCATTT+AGG + chr5_2:19124627-19124646 None:intergenic 25.0%
! CTATGTGTATATACAATTGT+AGG + chr5_2:19124690-19124709 None:intergenic 25.0%
! CAGTATATGAATGTATCTAA+TGG + chr5_2:19124716-19124735 None:intergenic 25.0%
! TAGATACATTCATATACTGT+TGG - chr5_2:19124717-19124736 Msa0761640:intron 25.0%
! AAAAAAAAATCGAAAAAGGG+AGG - chr5_2:19124997-19125016 Msa0761640:intron 25.0%
!!! GTATCGTTCTCATTTTAATT+TGG + chr5_2:19125116-19125135 None:intergenic 25.0%
! ATAGATTGAAAAAAAGGGTT+TGG - chr5_2:19125374-19125393 Msa0761640:intron 25.0%
!!! GCTTGTTGTCAAAATATTAT+TGG + chr5_2:19125708-19125727 None:intergenic 25.0%
! CATTATTGTTACAAAGATGT+GGG + chr5_2:19125831-19125850 None:intergenic 25.0%
! TCATTATTGTTACAAAGATG+TGG + chr5_2:19125832-19125851 None:intergenic 25.0%
!!! TCCCTTTTAATTTCAAAGAA+AGG - chr5_2:19126089-19126108 Msa0761640:intron 25.0%
!!! ATGCTTTTTAAAGTACATCT+CGG - chr5_2:19126304-19126323 Msa0761640:intron 25.0%
! TATTCAAAGAATGAATTGGA+TGG - chr5_2:19126437-19126456 Msa0761640:intron 25.0%
! ATTCAAAGAATGAATTGGAT+GGG - chr5_2:19126438-19126457 Msa0761640:intron 25.0%
! GATTTCAATAAACCAATCAA+TGG + chr5_2:19127535-19127554 None:intergenic 25.0%
! ATTAATTTCGCATTATTGGT+AGG - chr5_2:19127708-19127727 Msa0761640:intron 25.0%
! TTAATTTCGCATTATTGGTA+GGG - chr5_2:19127709-19127728 Msa0761640:intron 25.0%
!!! AATATCCTGCAATGTTTTAA+GGG + chr5_2:19127932-19127951 None:intergenic 25.0%
!! AAATCTATGTTTTGCACTTA+TGG - chr5_2:19128113-19128132 Msa0761640:intron 25.0%
!! AAATCTATGTTTTGCACTTA+TGG - chr5_2:19128113-19128132 Msa0761640:intron 25.0%
!! GCTCTAACACTATTATATTT+TGG + chr5_2:19128227-19128246 None:intergenic 25.0%
AATGAATGAATTGAACCTTC+TGG + chr5_2:19116816-19116835 None:intergenic 30.0%
TAACATCATGAAAAAAGTGG+AGG - chr5_2:19116984-19117003 Msa0761640:three_prime_UTR 30.0%
GCATTATCTTATTATGTCCT+AGG - chr5_2:19117011-19117030 Msa0761640:three_prime_UTR 30.0%
ATGATGATAATCAAACACCT+AGG + chr5_2:19117031-19117050 None:intergenic 30.0%
!! GCATTAAAAGTGTTGTATTG+TGG - chr5_2:19117126-19117145 Msa0761640:CDS 30.0%
! CTTTTCTAACTCAATGGTTT+CGG - chr5_2:19117513-19117532 Msa0761640:intron 30.0%
TATTGTACCTTCATCTGATT+CGG + chr5_2:19117817-19117836 None:intergenic 30.0%
TCATTCACAAAATTACTCAG+CGG - chr5_2:19117958-19117977 Msa0761640:CDS 30.0%
! AATAATTTGTAGGCTGCAAT+GGG - chr5_2:19118021-19118040 Msa0761640:CDS 30.0%
ATAGGAATGATCTCAATATC+AGG + chr5_2:19118395-19118414 None:intergenic 30.0%
GATATTTCACATCTGCTTTA+AGG + chr5_2:19118448-19118467 None:intergenic 30.0%
ATAATAGACAACTACACGAA+AGG - chr5_2:19118749-19118768 Msa0761640:intron 30.0%
ATCAATTGAATGCTAGTTAG+TGG - chr5_2:19118784-19118803 Msa0761640:intron 30.0%
AAGGAACAAGAGAAAAAAGA+TGG + chr5_2:19118817-19118836 None:intergenic 30.0%
!!! ATTTTTTTTTTTGTGGTGGC+CGG + chr5_2:19119027-19119046 None:intergenic 30.0%
ATTCTCTCTAGTGTCAATTT+AGG + chr5_2:19119170-19119189 None:intergenic 30.0%
TGGAAATGAGAGAAAATACA+TGG - chr5_2:19119268-19119287 Msa0761640:intron 30.0%
!! ATGCATTTACTTTGGAATGT+TGG + chr5_2:19119351-19119370 None:intergenic 30.0%
!!! TTAGGGTTTTGAGTTTTTGT+TGG - chr5_2:19119518-19119537 Msa0761640:intron 30.0%
CTTATATACAAGTACATGCT+AGG - chr5_2:19119634-19119653 Msa0761640:intron 30.0%
GTGATGTAATCATACTTAGT+TGG + chr5_2:19119762-19119781 Msa0761650:five_prime_UTR 30.0%
AGATAATTCAAGAAAAAGGG+TGG + chr5_2:19120275-19120294 Msa0761650:intron 30.0%
CAAAACAAAGTCGTATTAGA+TGG - chr5_2:19120363-19120382 Msa0761640:intron 30.0%
AACCACAAAATCAACTCAAT+GGG + chr5_2:19120557-19120576 Msa0761650:CDS 30.0%
AAAGAGAATAAAAACTAGGG+GGG + chr5_2:19120607-19120626 Msa0761650:intron 30.0%
! TAATATATTTAGGGTTGCAG+AGG - chr5_2:19120633-19120652 Msa0761640:intron 30.0%
! AATATATTTAGGGTTGCAGA+GGG - chr5_2:19120634-19120653 Msa0761640:intron 30.0%
ACACCATATAAGAAAACAGA+AGG + chr5_2:19120800-19120819 None:intergenic 30.0%
!! ATGGTGTCATTATCATTTCA+TGG - chr5_2:19120813-19120832 Msa0761640:intron 30.0%
ATCATTTCATGGATTTAGCT+TGG - chr5_2:19120824-19120843 Msa0761640:intron 30.0%
ATAAAAGAGAATATCGTGGT+GGG + chr5_2:19120985-19121004 None:intergenic 30.0%
TTGCATAAAAGAGAATATCG+TGG + chr5_2:19120989-19121008 None:intergenic 30.0%
TATAATGCAGAACTAGTAGA+AGG + chr5_2:19121542-19121561 None:intergenic 30.0%
GAAAATGACCTCAAATTACA+GGG + chr5_2:19121750-19121769 None:intergenic 30.0%
!!! TTTGTTTTTAAAAAGGTCCC+TGG - chr5_2:19121821-19121840 Msa0761640:intron 30.0%
CATACAACGTAATACTAAGA+AGG - chr5_2:19123120-19123139 Msa0761640:intron 30.0%
GGTATAAAAGTTAACAACGT+AGG + chr5_2:19123214-19123233 None:intergenic 30.0%
!!! TTTTTTCCATATATGAGAGG+AGG - chr5_2:19123252-19123271 Msa0761640:intron 30.0%
GAGGAGGAAATCAAATATAT+AGG - chr5_2:19123268-19123287 Msa0761640:intron 30.0%
!! ATGTTTTAGACTTTTGCCTA+CGG - chr5_2:19123603-19123622 Msa0761640:intron 30.0%
AACATCATCGAACAAAGAAA+AGG - chr5_2:19123836-19123855 Msa0761640:intron 30.0%
GATATCAATCTTACTATCCA+AGG - chr5_2:19124361-19124380 Msa0761640:intron 30.0%
AAATTCATCGGATGAAGATA+TGG + chr5_2:19124435-19124454 None:intergenic 30.0%
!! AGAGAGTGTTGAAAATTCAT+CGG + chr5_2:19124447-19124466 None:intergenic 30.0%
TCATTTAGGCAAAATTGATG+AGG + chr5_2:19124613-19124632 None:intergenic 30.0%
GTATATACAATTGTAGGTGT+TGG + chr5_2:19124684-19124703 None:intergenic 30.0%
!!! CATATACTGTTGGCTTTTAT+TGG - chr5_2:19124727-19124746 Msa0761640:intron 30.0%
!!! TTTTATGGTTTTGATTCTGC+TGG + chr5_2:19124896-19124915 None:intergenic 30.0%
AGTATGGAGAAAGTTTAAAC+TGG - chr5_2:19125195-19125214 Msa0761640:intron 30.0%
GTATGGAGAAAGTTTAAACT+GGG - chr5_2:19125196-19125215 Msa0761640:intron 30.0%
! TAACTTTTCATCTAGAGAGA+AGG - chr5_2:19125249-19125268 Msa0761640:intron 30.0%
AAAGGATGAAGGAAATACAA+TGG - chr5_2:19125307-19125326 Msa0761640:intron 30.0%
AAGGATGAAGGAAATACAAT+GGG - chr5_2:19125308-19125327 Msa0761640:intron 30.0%
!!! TTTATTGTTTTTTGGACAGC+AGG - chr5_2:19125502-19125521 Msa0761640:intron 30.0%
CTAAGTGATATGATATCACA+TGG + chr5_2:19125606-19125625 None:intergenic 30.0%
AGATATTTGTAAGGTTGTGA+GGG + chr5_2:19125793-19125812 None:intergenic 30.0%
AAGATATTTGTAAGGTTGTG+AGG + chr5_2:19125794-19125813 None:intergenic 30.0%
! ACCTTCTAAAGAAATGGAAA+GGG + chr5_2:19125995-19126014 None:intergenic 30.0%
! AACCTTCTAAAGAAATGGAA+AGG + chr5_2:19125996-19126015 None:intergenic 30.0%
! AAGTGAACCTTCTAAAGAAA+TGG + chr5_2:19126001-19126020 None:intergenic 30.0%
!!! TGCTTTTTAAAGTACATCTC+GGG - chr5_2:19126305-19126324 Msa0761640:intron 30.0%
CAGCTATTCAAAGAATGAAT+TGG - chr5_2:19126433-19126452 Msa0761640:intron 30.0%
GATGTTTACATCAATGTTCT+TGG - chr5_2:19126486-19126505 Msa0761640:intron 30.0%
TTATGATGCATCAAAACTTC+AGG - chr5_2:19126517-19126536 Msa0761640:CDS 30.0%
TATGATGCATCAAAACTTCA+GGG - chr5_2:19126518-19126537 Msa0761640:CDS 30.0%
ATTCATTCTGCATAATGTGA+AGG + chr5_2:19126602-19126621 None:intergenic 30.0%
TTCACATTATGCAGAATGAA+TGG - chr5_2:19126601-19126620 Msa0761640:CDS 30.0%
TCACATTATGCAGAATGAAT+GGG - chr5_2:19126602-19126621 Msa0761640:CDS 30.0%
! TTTAAAGTTGGAGACAAAGT+AGG - chr5_2:19126916-19126935 Msa0761640:intron 30.0%
TTAAAGTTGGAGACAAAGTA+GGG - chr5_2:19126917-19126936 Msa0761640:intron 30.0%
!!! GTGAAATTTGCTAAAGCTTT+TGG - chr5_2:19127252-19127271 Msa0761640:CDS 30.0%
TTTAGGCGATGTACTAATTA+CGG + chr5_2:19127289-19127308 None:intergenic 30.0%
AATTAGTACATCGCCTAAAA+AGG - chr5_2:19127290-19127309 Msa0761640:CDS 30.0%
! ATTGCTTCCTTTTCCTTTTT+AGG + chr5_2:19117754-19117773 None:intergenic 30.0%
AAACCAATCAATGGTAAAAC+AGG + chr5_2:19127526-19127545 None:intergenic 30.0%
ATCTAATGGAAAGCTTGTAA+TGG - chr5_2:19127552-19127571 Msa0761640:CDS 30.0%
! CTTCCTGTATTTTCTTTACT+TGG - chr5_2:19127601-19127620 Msa0761640:CDS 30.0%
TCAATAGCTGGAAGTTTAAT+TGG - chr5_2:19127738-19127757 Msa0761640:intron 30.0%
AAGTTTAATTGGAGGGATAA+AGG - chr5_2:19127749-19127768 Msa0761640:intron 30.0%
!! TATCGATTCGTGATTGATAT+TGG - chr5_2:19127888-19127907 Msa0761640:intron 30.0%
! GAATATCCTGCAATGTTTTA+AGG + chr5_2:19127933-19127952 None:intergenic 30.0%
TTCTTTGGATGCTCAAATTC+AGG + chr5_2:19116737-19116756 None:intergenic 35.0%
TGAATTTGAGCATCCAAAGA+AGG - chr5_2:19116736-19116755 Msa0761640:three_prime_UTR 35.0%
! ACCTTCTGGAGAAATTGAAA+GGG + chr5_2:19116802-19116821 None:intergenic 35.0%
! AACCTTCTGGAGAAATTGAA+AGG + chr5_2:19116803-19116822 None:intergenic 35.0%
GTATTGTGGAATATGTCACT+CGG - chr5_2:19117140-19117159 Msa0761640:CDS 35.0%
ATTCATTCTTCGCCTTATGA+AGG + chr5_2:19117167-19117186 None:intergenic 35.0%
TTCATAAGGCGAAGAATGAA+TGG - chr5_2:19117166-19117185 Msa0761640:CDS 35.0%
TCATAAGGCGAAGAATGAAT+GGG - chr5_2:19117167-19117186 Msa0761640:CDS 35.0%
TAAAAGTAGAAAGCTTACCC+CGG + chr5_2:19117216-19117235 None:intergenic 35.0%
AAAGTGAGCAAGTTCAAAGT+TGG - chr5_2:19117352-19117371 Msa0761640:CDS 35.0%
GATGGTTCCAAATATAGTGA+TGG - chr5_2:19117472-19117491 Msa0761640:CDS 35.0%
ACAACACCTATATTCATACC+AGG + chr5_2:19117652-19117671 None:intergenic 35.0%
! GGTATGAATATAGGTGTTGT+TGG - chr5_2:19117652-19117671 Msa0761640:CDS 35.0%
!! AATATAGGTGTTGTTGGTCT+TGG - chr5_2:19117658-19117677 Msa0761640:CDS 35.0%
! GAATAATTTGTAGGCTGCAA+TGG - chr5_2:19118020-19118039 Msa0761640:CDS 35.0%
TATTATCGACACAGTTTCAG+CGG - chr5_2:19118056-19118075 Msa0761640:CDS 35.0%
AAACCAATCAGAGGTAATAG+AGG + chr5_2:19118087-19118106 None:intergenic 35.0%
! ATTGGTTTACTCAAGTCTCA+TGG - chr5_2:19118099-19118118 Msa0761640:intron 35.0%
AGGGCATATTTAGCATCATA+TGG + chr5_2:19118225-19118244 None:intergenic 35.0%
!! ATTTCACATCTGCTTTAAGG+AGG + chr5_2:19118445-19118464 None:intergenic 35.0%
ATGCAAGTATGAAATCTCCT+TGG + chr5_2:19118614-19118633 None:intergenic 35.0%
ACAAGAGAAAAAAGATGGAG+AGG + chr5_2:19118812-19118831 None:intergenic 35.0%
GAGATAAAGAGATAGCATGA+AGG + chr5_2:19118836-19118855 None:intergenic 35.0%
! TGAGTTTAGCTCAGTTGTTA+TGG - chr5_2:19118963-19118982 Msa0761640:intron 35.0%
GCATAAAAATATGCAAGGTC+CGG - chr5_2:19118991-19119010 Msa0761640:CDS 35.0%
CATAAAAATATGCAAGGTCC+GGG - chr5_2:19118992-19119011 Msa0761640:CDS 35.0%
ATAAAAATATGCAAGGTCCG+GGG - chr5_2:19118993-19119012 Msa0761640:CDS 35.0%
!!! TTTTTTTTTTTGTGGTGGCC+GGG + chr5_2:19119026-19119045 None:intergenic 35.0%
TTTCCACTCTTAACCCATTT+GGG + chr5_2:19119254-19119273 None:intergenic 35.0%
ATTTCCACTCTTAACCCATT+TGG + chr5_2:19119255-19119274 None:intergenic 35.0%
ATGAGAGAAAATACATGGAG+AGG - chr5_2:19119273-19119292 Msa0761640:intron 35.0%
!! GCACGCCATTTTAATCAAAT+TGG + chr5_2:19119301-19119320 None:intergenic 35.0%
! GGCGTGCAATTTTCAAAATA+AGG - chr5_2:19119314-19119333 Msa0761640:intron 35.0%
TTGGGATGAAAAATCACTCA+AGG - chr5_2:19120060-19120079 Msa0761640:intron 35.0%
TTCTCTTCTTCGACATTCAT+CGG + chr5_2:19120474-19120493 Msa0761650:intron 35.0%
CTTTCTGTGAACTTTGTAGT+TGG - chr5_2:19120519-19120538 Msa0761640:intron 35.0%
!!! TACCCATTGAGTTGATTTTG+TGG - chr5_2:19120552-19120571 Msa0761640:intron 35.0%
CAACCACAAAATCAACTCAA+TGG + chr5_2:19120558-19120577 Msa0761650:CDS 35.0%
! ATTTTGTGGTTGACTGGATT+TGG - chr5_2:19120566-19120585 Msa0761640:intron 35.0%
AAGAGAATAAAAACTAGGGG+GGG + chr5_2:19120606-19120625 Msa0761650:intron 35.0%
AAAAGCAAAAGTGACGAAGA+TGG + chr5_2:19120663-19120682 Msa0761650:intron 35.0%
!! GTGATTGAGTGCTTTTTAAG+AGG + chr5_2:19120724-19120743 Msa0761650:CDS 35.0%
! GAAAACAGAAGGACCATTTT+TGG + chr5_2:19120789-19120808 None:intergenic 35.0%
! GGTCCTTCTGTTTTCTTATA+TGG - chr5_2:19120794-19120813 Msa0761640:intron 35.0%
CATAAAAGAGAATATCGTGG+TGG + chr5_2:19120986-19121005 None:intergenic 35.0%
! CTAGACGACACCTTTTATAA+AGG - chr5_2:19121472-19121491 Msa0761640:intron 35.0%
CGAAAATGACCTCAAATTAC+AGG + chr5_2:19121751-19121770 None:intergenic 35.0%
TGATTTCCTCCTCTCATATA+TGG + chr5_2:19123261-19123280 None:intergenic 35.0%
TTATACAGACATGCGATTGT+TGG - chr5_2:19123373-19123392 Msa0761640:intron 35.0%
! ATGAAATTAGCCTGTAGTGA+CGG + chr5_2:19123468-19123487 None:intergenic 35.0%
TTGAACAACAAAGGAGTGAA+CGG + chr5_2:19124285-19124304 None:intergenic 35.0%
GACATTGACAATCCTTACTA+TGG + chr5_2:19124410-19124429 None:intergenic 35.0%
TTAGGCAAAATTGATGAGGA+AGG + chr5_2:19124609-19124628 None:intergenic 35.0%
!! CAACTGCATAATGGATTATC+AGG + chr5_2:19124661-19124680 None:intergenic 35.0%
AAAAAATCGAAAAAGGGAGG+AGG - chr5_2:19125000-19125019 Msa0761640:intron 35.0%
!!! CTTTTTTACTTTCAGCTGAG+AGG + chr5_2:19125138-19125157 None:intergenic 35.0%
! CATACTTTGTTGTCTAGATC+TGG + chr5_2:19125181-19125200 None:intergenic 35.0%
CAGATCTAGACAACAAAGTA+TGG - chr5_2:19125179-19125198 Msa0761640:intron 35.0%
GAGAAAGTTTAAACTGGGAT+TGG - chr5_2:19125201-19125220 Msa0761640:intron 35.0%
TCTAGAGAGAAGGAGAAATA+TGG - chr5_2:19125259-19125278 Msa0761640:intron 35.0%
CTAGAGAGAAGGAGAAATAT+GGG - chr5_2:19125260-19125279 Msa0761640:intron 35.0%
TTGAAGTGAAGTGAAGTGAA+GGG - chr5_2:19125284-19125303 Msa0761640:intron 35.0%
AGGATGAAGGAAATACAATG+GGG - chr5_2:19125309-19125328 Msa0761640:intron 35.0%
!! TGATGCTGTTTCTTTAAACC+AGG - chr5_2:19125401-19125420 Msa0761640:intron 35.0%
!! GATGCTGTTTCTTTAAACCA+GGG - chr5_2:19125402-19125421 Msa0761640:intron 35.0%
!! ATGCTGTTTCTTTAAACCAG+GGG - chr5_2:19125403-19125422 Msa0761640:intron 35.0%
CACAAATTTGTGTAGTGTGT+AGG - chr5_2:19125570-19125589 Msa0761640:intron 35.0%
AGTGATATGATATCACATGG+TGG + chr5_2:19125603-19125622 None:intergenic 35.0%
TATCTTCAAACACATGTGTG+TGG - chr5_2:19125756-19125775 Msa0761640:intron 35.0%
! CCTTCTAAAGAAATGGAAAG+GGG + chr5_2:19125994-19126013 None:intergenic 35.0%
TGAGAAAGATGTAGCATTCA+AGG - chr5_2:19126548-19126567 Msa0761640:CDS 35.0%
!! CATTCAAGGTGTTGTATTGT+GGG - chr5_2:19126562-19126581 Msa0761640:CDS 35.0%
CACATTATGCAGAATGAATG+GGG - chr5_2:19126603-19126622 Msa0761640:CDS 35.0%
TAAAGTTGGAGACAAAGTAG+GGG - chr5_2:19126918-19126937 Msa0761640:intron 35.0%
! TATAGTCCTCTTCGACATTT+TGG - chr5_2:19117616-19117635 Msa0761640:CDS 35.0%
ACAACTCCTATATTCATACC+AGG + chr5_2:19127204-19127223 None:intergenic 35.0%
GGTATGAATATAGGAGTTGT+TGG - chr5_2:19127204-19127223 Msa0761640:intron 35.0%
! AATATAGGAGTTGTTGGTCT+TGG - chr5_2:19127210-19127229 Msa0761640:intron 35.0%
TACATCGCCTAAAAAGGAAA+AGG - chr5_2:19127296-19127315 Msa0761640:CDS 35.0%
AAGGAAGCAATAGAACACTT+AGG - chr5_2:19117763-19117782 Msa0761640:CDS 35.0%
! CATCCTGTTTTACCATTGAT+TGG - chr5_2:19127520-19127539 Msa0761640:CDS 35.0%
AATGGAAAGCTTGTAATGGT+TGG - chr5_2:19127556-19127575 Msa0761640:CDS 35.0%
CCTCCAAGTAAAGAAAATAC+AGG + chr5_2:19127607-19127626 None:intergenic 35.0%
! CCTGTATTTTCTTTACTTGG+AGG - chr5_2:19127604-19127623 Msa0761640:CDS 35.0%
ATAGCTGGAAGTTTAATTGG+AGG - chr5_2:19127741-19127760 Msa0761640:intron 35.0%
TAGCTGGAAGTTTAATTGGA+GGG - chr5_2:19127742-19127761 Msa0761640:intron 35.0%
! TTTTGTGTATCATCTGCCAA+TGG - chr5_2:19127998-19128017 Msa0761640:intron 35.0%
TCACACAAGTACAACAAAGA+GGG + chr5_2:19128043-19128062 None:intergenic 35.0%
ATCACACAAGTACAACAAAG+AGG + chr5_2:19128044-19128063 None:intergenic 35.0%
!! ATCCAAAGAAGGCATTTGGT+TGG - chr5_2:19116747-19116766 Msa0761640:three_prime_UTR 40.0%
!! TCCAAAGAAGGCATTTGGTT+GGG - chr5_2:19116748-19116767 Msa0761640:three_prime_UTR 40.0%
! CCTTCTGGAGAAATTGAAAG+GGG + chr5_2:19116801-19116820 None:intergenic 40.0%
CATAAGGCGAAGAATGAATG+GGG - chr5_2:19117168-19117187 Msa0761640:CDS 40.0%
TACGAACTATCCACTAGTTC+CGG - chr5_2:19117194-19117213 Msa0761640:CDS 40.0%
TGTTGGCATAGTTACAGAAG+TGG - chr5_2:19117324-19117343 Msa0761640:intron 40.0%
GTTGGCATAGTTACAGAAGT+GGG - chr5_2:19117325-19117344 Msa0761640:intron 40.0%
TTCAAAGTTGGAGACAGAGT+AGG - chr5_2:19117364-19117383 Msa0761640:CDS 40.0%
ACCATCAGTGAGTGTCAATT+GGG + chr5_2:19117458-19117477 None:intergenic 40.0%
AACCATCAGTGAGTGTCAAT+TGG + chr5_2:19117459-19117478 None:intergenic 40.0%
! GCTGGTTCCATCACTATATT+TGG + chr5_2:19117482-19117501 None:intergenic 40.0%
! TGGTGGCTTTTCTAACTCAA+TGG - chr5_2:19117507-19117526 Msa0761640:intron 40.0%
ACACAGTAATACCAGCACAA+AGG + chr5_2:19117597-19117616 None:intergenic 40.0%
TCGAGTTCAAAATGTCGAAG+AGG + chr5_2:19117625-19117644 None:intergenic 40.0%
GACAAGCCTGGTATGAATAT+AGG - chr5_2:19117643-19117662 Msa0761640:CDS 40.0%
TGGCAAATTTCACAGCCATA+TGG + chr5_2:19117693-19117712 None:intergenic 40.0%
GTGAAATTTGCCAAAGCCTT+TGG - chr5_2:19117700-19117719 Msa0761640:CDS 40.0%
CATCCTCTATTACCTCTGAT+TGG - chr5_2:19118081-19118100 Msa0761640:CDS 40.0%
GACTTGAGTAAACCAATCAG+AGG + chr5_2:19118096-19118115 None:intergenic 40.0%
GTCTCATGGAAAGCTTGTAA+TGG - chr5_2:19118113-19118132 Msa0761640:intron 40.0%
CATGGAAAGCTTGTAATGGT+TGG - chr5_2:19118117-19118136 Msa0761640:intron 40.0%
CCTGCAAGTAAAGGAAAAAC+AGG + chr5_2:19118168-19118187 None:intergenic 40.0%
!! CCTGTTTTTCCTTTACTTGC+AGG - chr5_2:19118165-19118184 Msa0761640:intron 40.0%
ATTGGTAGGGAGAAAGATAG+TGG - chr5_2:19118298-19118317 Msa0761640:intron 40.0%
ATAGTGGCTGGAAGTTTGAT+TGG - chr5_2:19118314-19118333 Msa0761640:intron 40.0%
! GCTGTGTTGACGTAATCAAT+AGG + chr5_2:19118413-19118432 None:intergenic 40.0%
CATTCAGTGTATCGTTTCCA+AGG - chr5_2:19118594-19118613 Msa0761640:intron 40.0%
ACAACTGAGCTAAACTCATG+AGG + chr5_2:19118961-19118980 None:intergenic 40.0%
!!! TTTTTTTTTTGTGGTGGCCG+GGG + chr5_2:19119025-19119044 None:intergenic 40.0%
!! GAGTTGATTTTGTGGTTGAC+TGG - chr5_2:19120560-19120579 Msa0761640:intron 40.0%
AGAGAATAAAAACTAGGGGG+GGG + chr5_2:19120605-19120624 Msa0761650:intron 40.0%
TGTGCTCTGATTGAGATTGA+GGG - chr5_2:19120847-19120866 Msa0761640:intron 40.0%
! GGGGTGATATTGTTTCTTTC+TGG - chr5_2:19120867-19120886 Msa0761640:intron 40.0%
AAACAAGGAAAAGATGGCTG+TGG - chr5_2:19120957-19120976 Msa0761640:intron 40.0%
ATTCCTCAAGTGTGAGATTC+TGG - chr5_2:19121038-19121057 Msa0761640:intron 40.0%
TATCCAGAATCTCACACTTG+AGG + chr5_2:19121044-19121063 None:intergenic 40.0%
ATGACCTCAAATTACAGGGA+CGG + chr5_2:19121746-19121765 None:intergenic 40.0%
TCAAAACACGCCCAAATTAC+AGG - chr5_2:19122979-19122998 Msa0761640:intron 40.0%
CAAAACACGCCCAAATTACA+GGG - chr5_2:19122980-19122999 Msa0761640:intron 40.0%
GATTGTTGGCATAGTTACAG+AGG - chr5_2:19123387-19123406 Msa0761640:intron 40.0%
TACAGAGGTTGGAAGCAAAT+TGG - chr5_2:19123402-19123421 Msa0761640:intron 40.0%
! TGAAATTAGCCTGTAGTGAC+GGG + chr5_2:19123467-19123486 None:intergenic 40.0%
ATTCGTCTGTCATTGCTAGA+TGG - chr5_2:19123570-19123589 Msa0761640:intron 40.0%
!!! TACCTACTTTTTTGGTCCGT+AGG + chr5_2:19123622-19123641 None:intergenic 40.0%
! AAGACTCTACCTTAGGGTTT+TGG - chr5_2:19123706-19123725 Msa0761640:intron 40.0%
TAATGACTGCCAAAACCCTA+AGG + chr5_2:19123718-19123737 None:intergenic 40.0%
GAACAAAGAAAAGGACCATG+TGG - chr5_2:19123845-19123864 Msa0761640:intron 40.0%
TTAAACGCCACCATATCACA+TGG + chr5_2:19123872-19123891 None:intergenic 40.0%
TGTTCTTCATCTCCTTCTTC+AGG - chr5_2:19124255-19124274 Msa0761640:intron 40.0%
GTTCTTCATCTCCTTCTTCA+GGG - chr5_2:19124256-19124275 Msa0761640:intron 40.0%
TGAACAACAAAGGAGTGAAC+GGG + chr5_2:19124284-19124303 None:intergenic 40.0%
TCAAAGTTGCAGCCATAGTA+AGG - chr5_2:19124395-19124414 Msa0761640:intron 40.0%
AATTGATGAGGAAGGTTCTG+AGG + chr5_2:19124601-19124620 None:intergenic 40.0%
! AGATCTGGAGTGACAAAGAT+TGG + chr5_2:19125166-19125185 None:intergenic 40.0%
CTTGAAGTGAAGTGAAGTGA+AGG - chr5_2:19125283-19125302 Msa0761640:intron 40.0%
TGAAGGAAATACAATGGGGA+AGG - chr5_2:19125313-19125332 Msa0761640:intron 40.0%
!! TGCTGTTTCTTTAAACCAGG+GGG - chr5_2:19125404-19125423 Msa0761640:intron 40.0%
GTGTTTCCTAAGAAAGCCTT+TGG - chr5_2:19125936-19125955 Msa0761640:intron 40.0%
TTCCTAAGAAAGCCTTTGGA+TGG - chr5_2:19125940-19125959 Msa0761640:intron 40.0%
TCCTAAGAAAGCCTTTGGAT+GGG - chr5_2:19125941-19125960 Msa0761640:intron 40.0%
CCCCTTTCCATTTCTTTAGA+AGG - chr5_2:19125991-19126010 Msa0761640:intron 40.0%
CATCAAAACTTCAGGGAAAC+AGG - chr5_2:19126525-19126544 Msa0761640:CDS 40.0%
!! GCATTCAAGGTGTTGTATTG+TGG - chr5_2:19126561-19126580 Msa0761640:CDS 40.0%
AAGGAGTTGAAAACATACCC+CGG + chr5_2:19126651-19126670 None:intergenic 40.0%
AAATACAGGCACGAACTTAC+AGG - chr5_2:19126859-19126878 Msa0761640:intron 40.0%
ACTTACAGGTGTAGTAACAG+AGG - chr5_2:19126873-19126892 Msa0761640:intron 40.0%
! TTCAATGGTAAGTATCGCGA+TGG - chr5_2:19127024-19127043 Msa0761640:intron 40.0%
GACAAGCCTGGTATGAATAT+AGG - chr5_2:19117643-19117662 Msa0761640:CDS 40.0%
AAATGTACCTGCATCTGATC+TGG + chr5_2:19127369-19127388 None:intergenic 40.0%
! GAAAATACAGGAAGCTCTAG+AGG + chr5_2:19127595-19127614 None:intergenic 40.0%
CAATGTAACTCCTGAGATTG+AGG - chr5_2:19127806-19127825 Msa0761640:CDS 40.0%
ATAGGAACAACCTCAATCTC+AGG + chr5_2:19127819-19127838 None:intergenic 40.0%
! GCTGTGTTGACATAATCGAT+AGG + chr5_2:19127837-19127856 None:intergenic 40.0%
CGATTATGTCAACACAGCAA+TGG - chr5_2:19127839-19127858 Msa0761640:CDS 40.0%
!! GAGCATCCAAAGAAGGCATT+TGG - chr5_2:19116743-19116762 Msa0761640:three_prime_UTR 45.0%
CCCCTTTCAATTTCTCCAGA+AGG - chr5_2:19116798-19116817 Msa0761640:intron 45.0%
GTCTTTCTCAGATGTTTCCC+TGG + chr5_2:19117103-19117122 None:intergenic 45.0%
ATGTCACTCGGACCTTCATA+AGG - chr5_2:19117152-19117171 Msa0761640:CDS 45.0%
ACGAACTATCCACTAGTTCC+GGG - chr5_2:19117195-19117214 Msa0761640:CDS 45.0%
CCATCAGTGAGTGTCAATTG+GGG + chr5_2:19117457-19117476 None:intergenic 45.0%
GCATCAAGAGGTAACTCATC+TGG + chr5_2:19117562-19117581 None:intergenic 45.0%
GTAATACCAGCACAAAGGAG+AGG + chr5_2:19117592-19117611 None:intergenic 45.0%
! CATTTTGAACTCGACAAGCC+TGG - chr5_2:19117631-19117650 Msa0761640:CDS 45.0%
!! ATAGGTGTTGTTGGTCTTGG+TGG - chr5_2:19117661-19117680 Msa0761640:CDS 45.0%
CACATTAGCACCAAAGGCTT+TGG + chr5_2:19117713-19117732 None:intergenic 45.0%
TACGGTCACATTAGCACCAA+AGG + chr5_2:19117719-19117738 None:intergenic 45.0%
TCGTGATCCGAATCAGATGA+AGG - chr5_2:19117807-19117826 Msa0761640:intron 45.0%
! GGAAAAACAGGAAGCTCTAG+AGG + chr5_2:19118156-19118175 None:intergenic 45.0%
TGGCTGGAAGTTTGATTGGT+GGG - chr5_2:19118318-19118337 Msa0761640:intron 45.0%
TGATTACGTCAACACAGCGA+TGG - chr5_2:19118415-19118434 Msa0761640:CDS 45.0%
ACTACACGAAAGGTCACGTT+TGG - chr5_2:19118759-19118778 Msa0761640:intron 45.0%
GAATCGAACCTGAGACATCA+AGG - chr5_2:19119186-19119205 Msa0761640:intron 45.0%
!! TTGGGTTGACCTAGTGGTAT+TGG + chr5_2:19119236-19119255 None:intergenic 45.0%
TACCACTAGGTCAACCCAAA+TGG - chr5_2:19119237-19119256 Msa0761640:intron 45.0%
ACCACTAGGTCAACCCAAAT+GGG - chr5_2:19119238-19119257 Msa0761640:intron 45.0%
!! CAACCCAAATGGGTTAAGAG+TGG - chr5_2:19119248-19119267 Msa0761640:intron 45.0%
GTACATGCTAGGTTGCTTGA+AGG - chr5_2:19119645-19119664 Msa0761640:intron 45.0%
! CATCGGAGATACGTGGTTTT+CGG + chr5_2:19120457-19120476 Msa0761650:intron 45.0%
AGAATAAAAACTAGGGGGGG+GGG + chr5_2:19120603-19120622 Msa0761650:intron 45.0%
GAGAATAAAAACTAGGGGGG+GGG + chr5_2:19120604-19120623 Msa0761650:intron 45.0%
GTGTGCTCTGATTGAGATTG+AGG - chr5_2:19120846-19120865 Msa0761640:intron 45.0%
GTGCTCTGATTGAGATTGAG+GGG - chr5_2:19120848-19120867 Msa0761640:intron 45.0%
CAAACCGTCCCTGTAATTTG+AGG - chr5_2:19121739-19121758 Msa0761640:intron 45.0%
GCAAACCGTCCCTGTAATTT+GGG + chr5_2:19121738-19121757 None:intergenic 45.0%
TGCAAACCGTCCCTGTAATT+TGG + chr5_2:19121737-19121756 None:intergenic 45.0%
GTTGGCATAGTTACAGAGGT+TGG - chr5_2:19123391-19123410 Msa0761640:intron 45.0%
TGCCTACGGACCAAAAAAGT+AGG - chr5_2:19123617-19123636 Msa0761640:intron 45.0%
ACCATGTGGACCATGTGATA+TGG - chr5_2:19123859-19123878 Msa0761640:intron 45.0%
ACCATATCACATGGTCCACA+TGG + chr5_2:19123863-19123882 None:intergenic 45.0%
ATGTGGACCATGTGATATGG+TGG - chr5_2:19123862-19123881 Msa0761640:intron 45.0%
GAATGGTCTGGATTGAGCAT+TGG - chr5_2:19123975-19123994 Msa0761640:intron 45.0%
TCAAGCAAGAGGTCATTGAC+AGG + chr5_2:19124004-19124023 None:intergenic 45.0%
CGCAATGCGTTGAACAACAA+AGG + chr5_2:19124294-19124313 None:intergenic 45.0%
!! CTTTGATTCTGAAGCTGCCT+TGG + chr5_2:19124381-19124400 None:intergenic 45.0%
!! AGGTGTTGGCAACTGCATAA+TGG + chr5_2:19124670-19124689 None:intergenic 45.0%
! TCTGGAGTGACAAAGATTGG+TGG + chr5_2:19125163-19125182 None:intergenic 45.0%
GTGAAGTGAAGTGAAGGGAA+AGG - chr5_2:19125289-19125308 Msa0761640:intron 45.0%
GAAGTGAAGGGAAAGGATGA+AGG - chr5_2:19125296-19125315 Msa0761640:intron 45.0%
ATACAATGGGGAAGGAGAAG+TGG - chr5_2:19125321-19125340 Msa0761640:intron 45.0%
! AGGGGGTGTGATTCGAAAAA+GGG - chr5_2:19125421-19125440 Msa0761640:intron 45.0%
AACCACCTATCCATTAGTCC+CGG - chr5_2:19126629-19126648 Msa0761640:CDS 45.0%
AAAACATACCCCGGGACTAA+TGG + chr5_2:19126642-19126661 None:intergenic 45.0%
AGGAGTTGAAAACATACCCC+GGG + chr5_2:19126650-19126669 None:intergenic 45.0%
TACAGGTGTAGTAACAGAGG+TGG - chr5_2:19126876-19126895 Msa0761640:intron 45.0%
ACAGGTGTAGTAACAGAGGT+GGG - chr5_2:19126877-19126896 Msa0761640:intron 45.0%
CTCGTTTGCAACCATTGAGT+CGG + chr5_2:19127073-19127092 None:intergenic 45.0%
CCATCAAGAGGTAAGCTATC+AGG + chr5_2:19127114-19127133 None:intergenic 45.0%
CCTGATAGCTTACCTCTTGA+TGG - chr5_2:19127111-19127130 Msa0761640:intron 45.0%
TCGAGTCCAAAATGTCGAAG+AGG + chr5_2:19127177-19127196 None:intergenic 45.0%
!! ATAGGAGTTGTTGGTCTTGG+TGG - chr5_2:19127213-19127232 Msa0761640:intron 45.0%
!! TCTTGGTGGACTTGGTCATA+TGG - chr5_2:19127227-19127246 Msa0761640:intron 45.0%
GCTGCAACGAGTACTTTGAA+TGG - chr5_2:19127472-19127491 Msa0761640:CDS 45.0%
GTAGGGAGAAAGTCAATAGC+TGG - chr5_2:19127726-19127745 Msa0761640:intron 45.0%
!!! CCTGCAATGTTTTAAGGGCT+TGG + chr5_2:19127927-19127946 None:intergenic 45.0%
CCAAGCCCTTAAAACATTGC+AGG - chr5_2:19127924-19127943 Msa0761640:intron 45.0%
!!! AAAAAATATTTTTTTTTTTG+TGG + chr5_2:19119034-19119053 None:intergenic 5.0%
!!! CTTTTTATTTTAATATATTT+AGG - chr5_2:19120623-19120642 Msa0761640:intron 5.0%
!!! TTAAATTTTTTTTTTTTACA+AGG + chr5_2:19121781-19121800 None:intergenic 5.0%
!!! AAATTTTTTTGTTTTTAAAA+AGG - chr5_2:19121814-19121833 Msa0761640:intron 5.0%
!!! TTTTAAATTTTAATATTATG+TGG + chr5_2:19121935-19121954 None:intergenic 5.0%
!!! ATTTTTTAAAACTATATAAT+TGG + chr5_2:19122694-19122713 None:intergenic 5.0%
!!! ATTTTTTAAAACTATATAAT+CGG - chr5_2:19122694-19122713 Msa0761640:intron 5.0%
!!! TTTAAAATTTTAATATTATG+TGG - chr5_2:19122795-19122814 Msa0761640:intron 5.0%
!!! AAAAAATTTTTGTTTTAAAA+AGG + chr5_2:19122916-19122935 None:intergenic 5.0%
!!! TTTAAAATTTTTTTTTTTAC+AGG - chr5_2:19122948-19122967 Msa0761640:intron 5.0%
!!! TTAAAATTTTTTTTTTTACA+GGG - chr5_2:19122949-19122968 Msa0761640:intron 5.0%
!! TAATTTACAATTAAATAAAT+TGG + chr5_2:19123331-19123350 None:intergenic 5.0%
!! ATTAATATATTATATATCAA+TGG + chr5_2:19123953-19123972 None:intergenic 5.0%
!! ATATAATATATTAATATGAA+TGG - chr5_2:19123958-19123977 Msa0761640:intron 5.0%
!! AAAATCAATAATTTATTATT+TGG + chr5_2:19124822-19124841 None:intergenic 5.0%
!! AAAAAACAATAAAAAAAAAT+AGG + chr5_2:19125495-19125514 None:intergenic 5.0%
!!! TATTTTTTTTTATTGTTTTT+TGG - chr5_2:19125494-19125513 Msa0761640:intron 5.0%
GCCCAACCAAATGCCTTCTT+TGG + chr5_2:19116752-19116771 None:intergenic 50.0%
CGAACTATCCACTAGTTCCG+GGG - chr5_2:19117196-19117215 Msa0761640:CDS 50.0%
AAAGCTTACCCCGGAACTAG+TGG + chr5_2:19117207-19117226 None:intergenic 50.0%
GTTGGAGACAGAGTAGGTGT+CGG - chr5_2:19117370-19117389 Msa0761640:CDS 50.0%
CCCCAATTGACACTCACTGA+TGG - chr5_2:19117454-19117473 Msa0761640:CDS 50.0%
! AGTGATGGAACCAGCACTCA+TGG - chr5_2:19117487-19117506 Msa0761640:intron 50.0%
AGAAAAGCCACCATGAGTGC+TGG + chr5_2:19117500-19117519 None:intergenic 50.0%
CGGACGAGCACTTTGTGTTT+CGG - chr5_2:19117533-19117552 Msa0761640:intron 50.0%
!! GTTGTTGGTCTTGGTGGACT+TGG - chr5_2:19117667-19117686 Msa0761640:CDS 50.0%
!! TCTTGGTGGACTTGGCCATA+TGG - chr5_2:19117675-19117694 Msa0761640:CDS 50.0%
GTAGGCTGCAATGGGTACTT+TGG - chr5_2:19118029-19118048 Msa0761640:CDS 50.0%
GCTGCAATGGGTACTTTGGA+TGG - chr5_2:19118033-19118052 Msa0761640:CDS 50.0%
!!! GGAAGCTCTAGAGGCTTTTC+AGG + chr5_2:19118147-19118166 None:intergenic 50.0%
! GTAGGGAGAAAGATAGTGGC+TGG - chr5_2:19118302-19118321 Msa0761640:intron 50.0%
GTGGCTGGAAGTTTGATTGG+TGG - chr5_2:19118317-19118336 Msa0761640:intron 50.0%
TCGAACCTGAGACATCAAGG+AGG - chr5_2:19119189-19119208 Msa0761640:intron 50.0%
!! TGACCTAGTGGTATTGGCCT+GGG + chr5_2:19119230-19119249 None:intergenic 50.0%
!! TTGACCTAGTGGTATTGGCC+TGG + chr5_2:19119231-19119250 None:intergenic 50.0%
!! ACCCATTTGGGTTGACCTAG+TGG + chr5_2:19119242-19119261 None:intergenic 50.0%
CGACATTCATCGGAGATACG+TGG + chr5_2:19120464-19120483 Msa0761650:intron 50.0%
AATAAAAACTAGGGGGGGGG+GGG + chr5_2:19120601-19120620 Msa0761650:intron 50.0%
GAATAAAAACTAGGGGGGGG+GGG + chr5_2:19120602-19120621 Msa0761650:intron 50.0%
! ACTGTGCAACTTTTGCCACG+TGG + chr5_2:19121894-19121913 None:intergenic 50.0%
! ACGTTGAGGTGGCATGGTTT+TGG + chr5_2:19122876-19122895 None:intergenic 50.0%
AACCATGCCACCTCAACGTT+TGG - chr5_2:19122877-19122896 Msa0761640:intron 50.0%
ACCATGCCACCTCAACGTTT+GGG - chr5_2:19122878-19122897 Msa0761640:intron 50.0%
ACACGCCCAAATTACAGGGA+CGG - chr5_2:19122984-19123003 Msa0761640:intron 50.0%
CAGACAAAACCCGTCACTAC+AGG - chr5_2:19123455-19123474 Msa0761640:intron 50.0%
!! GGTTCTGAGGTATGTTGCAC+TGG + chr5_2:19124588-19124607 None:intergenic 50.0%
!!! CTTTTTCGAATCACACCCCC+TGG + chr5_2:19125422-19125441 None:intergenic 50.0%
! CAGGGGGTGTGATTCGAAAA+AGG - chr5_2:19125420-19125439 Msa0761640:intron 50.0%
GGGTGTGATTCGAAAAAGGG+AGG - chr5_2:19125424-19125443 Msa0761640:intron 50.0%
ACAGCAGGTCACAAACTGAC+AGG - chr5_2:19125517-19125536 Msa0761640:intron 50.0%
GCCCATCCAAAGGCTTTCTT+AGG + chr5_2:19125945-19125964 None:intergenic 50.0%
ACCACCTATCCATTAGTCCC+GGG - chr5_2:19126630-19126649 Msa0761640:CDS 50.0%
! ATACCCCGGGACTAATGGAT+AGG + chr5_2:19126637-19126656 None:intergenic 50.0%
AGTTGGAGACAAAGTAGGGG+TGG - chr5_2:19126921-19126940 Msa0761640:intron 50.0%
GTTGGAGACAAAGTAGGGGT+GGG - chr5_2:19126922-19126941 Msa0761640:intron 50.0%
CAAAGTAGGGGTGGGATACA+TGG - chr5_2:19126930-19126949 Msa0761640:intron 50.0%
GGAGAAACCTCCATAGGTGA+TGG + chr5_2:19127052-19127071 None:intergenic 50.0%
TGAGTCGGAGAAACCTCCAT+AGG + chr5_2:19127058-19127077 None:intergenic 50.0%
TGGAGGTTTCTCCGACTCAA+TGG - chr5_2:19127059-19127078 Msa0761640:intron 50.0%
!! AGCTTACCTCTTGATGGTGC+CGG - chr5_2:19127117-19127136 Msa0761640:intron 50.0%
! CATTTTGGACTCGACAAGCC+TGG - chr5_2:19127183-19127202 Msa0761640:intron 50.0%
!! GTTGTTGGTCTTGGTGGACT+TGG - chr5_2:19117667-19117686 Msa0761640:CDS 50.0%
! GCAATGGAGCGTCTTGCTAA+AGG - chr5_2:19127855-19127874 Msa0761640:intron 50.0%
TGGGCAGCTAGAGACTCTTC+TGG - chr5_2:19116767-19116786 Msa0761640:three_prime_UTR 55.0%
!! CAGAGTAGGTGTCGGATGCT+TGG - chr5_2:19117378-19117397 Msa0761640:CDS 55.0%
GATGGAACCAGCACTCATGG+TGG - chr5_2:19117490-19117509 Msa0761640:intron 55.0%
AGAGGAGCAGCAGCATCAAG+AGG + chr5_2:19117574-19117593 None:intergenic 55.0%
GTGCTCCTCCTTGATGTCTC+AGG + chr5_2:19119197-19119216 None:intergenic 55.0%
!! GTGGTATTGGCCTGGGATCT+GGG + chr5_2:19119223-19119242 None:intergenic 55.0%
!! AGTGGTATTGGCCTGGGATC+TGG + chr5_2:19119224-19119243 None:intergenic 55.0%
GATCCCAGGCCAATACCACT+AGG - chr5_2:19119224-19119243 Msa0761640:intron 55.0%
ATAAAAACTAGGGGGGGGGG+GGG + chr5_2:19120600-19120619 Msa0761650:intron 55.0%
!! TGCCACGTCAGCGTTTTGGT+GGG + chr5_2:19121848-19121867 None:intergenic 55.0%
! ATGCCACGTCAGCGTTTTGG+TGG + chr5_2:19121849-19121868 None:intergenic 55.0%
ACCAAAACGCTGACGTGGCA+TGG - chr5_2:19121848-19121867 Msa0761640:intron 55.0%
! TTTGCCACGTGTCACTGACG+TGG - chr5_2:19121905-19121924 Msa0761640:intron 55.0%
ACCCAAACGTTGAGGTGGCA+TGG + chr5_2:19122882-19122901 None:intergenic 55.0%
ATGCCACCTCAACGTTTGGG+TGG - chr5_2:19122881-19122900 Msa0761640:intron 55.0%
TGCCACCTCAACGTTTGGGT+GGG - chr5_2:19122882-19122901 Msa0761640:intron 55.0%
GTGAACGGGATCCCTGAAGA+AGG + chr5_2:19124270-19124289 None:intergenic 55.0%
GCAGGTCACAAACTGACAGG+TGG - chr5_2:19125520-19125539 Msa0761640:intron 55.0%
AAGCCTTTGGATGGGCAGCT+AGG - chr5_2:19125949-19125968 Msa0761640:intron 55.0%
AGCCTTTGGATGGGCAGCTA+GGG - chr5_2:19125950-19125969 Msa0761640:intron 55.0%
CCACCTATCCATTAGTCCCG+GGG - chr5_2:19126631-19126650 Msa0761640:CDS 55.0%
GATGGCACCATCACCTATGG+AGG - chr5_2:19127042-19127061 Msa0761640:intron 55.0%
TCCAGCGCAAAGAAGAGGAC+CGG + chr5_2:19127139-19127158 None:intergenic 55.0%
GTGACTCCAGCGCAAAGAAG+AGG + chr5_2:19127144-19127163 None:intergenic 55.0%
CCTGCATCTGATCTGGATCG+CGG + chr5_2:19127362-19127381 None:intergenic 55.0%
GCTGCTCCTCTCCTTTGTGC+TGG - chr5_2:19117583-19117602 Msa0761640:intron 60.0%
TAAAAACTAGGGGGGGGGGG+GGG + chr5_2:19120599-19120618 Msa0761650:intron 60.0%
!! TCAGCGTTTTGGTGGGGCCA+GGG + chr5_2:19121841-19121860 None:intergenic 60.0%
!! GCCACGTCAGCGTTTTGGTG+GGG + chr5_2:19121847-19121866 None:intergenic 60.0%
! GCCATGCCACGTCAGCGTTT+TGG + chr5_2:19121852-19121871 None:intergenic 60.0%
GTGGCATGGCAGTGCACACA+TGG - chr5_2:19121862-19121881 Msa0761640:intron 60.0%
CATGCCACGTCAGTGACACG+TGG + chr5_2:19121912-19121931 None:intergenic 60.0%
CACAGTCAGCAACTGCCACG+TGG - chr5_2:19122850-19122869 Msa0761640:intron 60.0%
!!! GTGGCATGGTTTTGGCCACG+TGG + chr5_2:19122868-19122887 None:intergenic 60.0%
GCCACCTCAACGTTTGGGTG+GGG - chr5_2:19122883-19122902 Msa0761640:intron 60.0%
GTCCCTAGCTGCCCATCCAA+AGG + chr5_2:19125955-19125974 None:intergenic 60.0%
TGGGCAGCTAGGGACTCTTC+TGG - chr5_2:19125960-19125979 Msa0761640:intron 60.0%
! CCCCGGGACTAATGGATAGG+TGG + chr5_2:19126634-19126653 None:intergenic 60.0%
CGCGATGGCACCATCACCTA+TGG - chr5_2:19127039-19127058 Msa0761640:intron 60.0%
AGAGGACCGGCACCATCAAG+AGG + chr5_2:19127126-19127145 None:intergenic 60.0%
CCGCGATCCAGATCAGATGC+AGG - chr5_2:19127359-19127378 Msa0761640:CDS 60.0%
AAGGTCCGGGGTTCGAACCC+CGG - chr5_2:19119005-19119024 Msa0761640:CDS 65.0%
! GGAGCACTCTCCCAGATCCC+AGG - chr5_2:19119210-19119229 Msa0761640:intron 65.0%
AAAAACTAGGGGGGGGGGGG+GGG + chr5_2:19120598-19120617 Msa0761650:intron 65.0%
!! GTCAGCGTTTTGGTGGGGCC+AGG + chr5_2:19121842-19121861 None:intergenic 65.0%
GCCCCACCAAAACGCTGACG+TGG - chr5_2:19121843-19121862 Msa0761640:intron 65.0%
!! TTTGCCACGTGGCGCTGACG+TGG + chr5_2:19122825-19122844 None:intergenic 65.0%
GCCCCACCCAAACGTTGAGG+TGG + chr5_2:19122887-19122906 None:intergenic 65.0%
CTGGCCCCACCCAAACGTTG+AGG + chr5_2:19122890-19122909 None:intergenic 65.0%
GCCGGTCCTCTTCTTTGCGC+TGG - chr5_2:19127135-19127154 Msa0761640:intron 65.0%
CAAGCCACGTCAGCGCCACG+TGG - chr5_2:19122818-19122837 Msa0761640:intron 70.0%
GGTGGCCGGGGTTCGAACCC+CGG + chr5_2:19119013-19119032 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 19116722 19128254 19116722 ID=Msa0761640;Name=Msa0761640
chr5_2 mRNA 19116722 19128254 19116722 ID=Msa0761640-mRNA-1;Parent=Msa0761640;Name=Msa0761640-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.41|0.30|1|0.66|0.38|13|268|618
chr5_2 exon 19116722 19116790 19116722 ID=Msa0761640-mRNA-1:exon:8230;Parent=Msa0761640-mRNA-1
chr5_2 exon 19116842 19117246 19116842 ID=Msa0761640-mRNA-1:exon:8229;Parent=Msa0761640-mRNA-1
chr5_2 exon 19117351 19117504 19117351 ID=Msa0761640-mRNA-1:exon:8228;Parent=Msa0761640-mRNA-1
chr5_2 exon 19117596 19117810 19117596 ID=Msa0761640-mRNA-1:exon:8227;Parent=Msa0761640-mRNA-1
chr5_2 exon 19117913 19118109 19117913 ID=Msa0761640-mRNA-1:exon:8226;Parent=Msa0761640-mRNA-1
chr5_2 exon 19118324 19118437 19118324 ID=Msa0761640-mRNA-1:exon:8225;Parent=Msa0761640-mRNA-1
chr5_2 exon 19118964 19119073 19118964 ID=Msa0761640-mRNA-1:exon:8224;Parent=Msa0761640-mRNA-1
chr5_2 exon 19126504 19126670 19126504 ID=Msa0761640-mRNA-1:exon:8223;Parent=Msa0761640-mRNA-1
chr5_2 exon 19126790 19126862 19126790 ID=Msa0761640-mRNA-1:exon:8222;Parent=Msa0761640-mRNA-1
chr5_2 exon 19127241 19127435 19127241 ID=Msa0761640-mRNA-1:exon:8221;Parent=Msa0761640-mRNA-1
chr5_2 exon 19127448 19127661 19127448 ID=Msa0761640-mRNA-1:exon:8220;Parent=Msa0761640-mRNA-1
chr5_2 exon 19127759 19127872 19127759 ID=Msa0761640-mRNA-1:exon:8219;Parent=Msa0761640-mRNA-1
chr5_2 exon 19128157 19128254 19128157 ID=Msa0761640-mRNA-1:exon:8218;Parent=Msa0761640-mRNA-1
chr5_2 CDS 19128157 19128254 19128157 ID=Msa0761640-mRNA-1:cds;Parent=Msa0761640-mRNA-1
chr5_2 CDS 19127759 19127872 19127759 ID=Msa0761640-mRNA-1:cds;Parent=Msa0761640-mRNA-1
chr5_2 CDS 19127448 19127661 19127448 ID=Msa0761640-mRNA-1:cds;Parent=Msa0761640-mRNA-1
chr5_2 CDS 19127241 19127435 19127241 ID=Msa0761640-mRNA-1:cds;Parent=Msa0761640-mRNA-1
chr5_2 CDS 19126790 19126862 19126790 ID=Msa0761640-mRNA-1:cds;Parent=Msa0761640-mRNA-1
chr5_2 CDS 19126504 19126670 19126504 ID=Msa0761640-mRNA-1:cds;Parent=Msa0761640-mRNA-1
chr5_2 CDS 19118964 19119073 19118964 ID=Msa0761640-mRNA-1:cds;Parent=Msa0761640-mRNA-1
chr5_2 CDS 19118324 19118437 19118324 ID=Msa0761640-mRNA-1:cds;Parent=Msa0761640-mRNA-1
chr5_2 CDS 19117913 19118109 19117913 ID=Msa0761640-mRNA-1:cds;Parent=Msa0761640-mRNA-1
chr5_2 CDS 19117596 19117810 19117596 ID=Msa0761640-mRNA-1:cds;Parent=Msa0761640-mRNA-1
chr5_2 CDS 19117351 19117504 19117351 ID=Msa0761640-mRNA-1:cds;Parent=Msa0761640-mRNA-1
chr5_2 CDS 19117041 19117246 19117041 ID=Msa0761640-mRNA-1:cds;Parent=Msa0761640-mRNA-1
chr5_2 three_prime_UTR 19116842 19117040 19116842 ID=Msa0761640-mRNA-1:three_prime_utr;Parent=Msa0761640-mRNA-1
chr5_2 three_prime_UTR 19116722 19116790 19116722 ID=Msa0761640-mRNA-1:three_prime_utr;Parent=Msa0761640-mRNA-1
Gene Sequence

>Msa0761640

ATGGCAACACAACCTGAATTTGAGCATCCAAAGAAGGCATTTGGTTGGGCAGCTAGAGACTCTTCTGGTGTTCTCTCCCCTTTCAATTTCTCCAGAAGGGAAACATCTGAGAAAGACGTAGCATTAAAAGTGTTGTATTGTGGAATATGTCACTCGGACCTTCATAAGGCGAAGAATGAATGGGGCACTACGAACTATCCACTAGTTCCGGGACATGAAATTGTTGGCATAGTTACAGAAGTGGGAAGCAAAGTGAGCAAGTTCAAAGTTGGAGACAGAGTAGGTGTCGGATGCTTGGTTGATTCTTGTCACTCATGTCAAAATTGTGTTGATAATCTTGAGAATTACTGTCCCCAATTGACACTCACTGATGGTTCCAAATATAGTGATGGAACCAGCACTCATGGTGGCTTTTCTAACTCAATGCACTTTGTGTTTCGGATTCCAGATGAGTTACCTCTTGATGCTGCTGCTCCTCTCCTTTGTGCTGGTATTACTGTGTATAGTCCTCTTCGACATTTTGAACTCGACAAGCCTGGTATGAATATAGGTGTTGTTGGTCTTGGTGGACTTGGCCATATGGCTGTGAAATTTGCCAAAGCCTTTGGTGCTAATGTGACCTCTCATGGAAAGCTTGTAATGGTTGGTGCACCTGAAAAGCCTCTAGAGCTTCCTGTTTTTCCTTTACTTGCAGGGAGAAAGATAGTGGCTGGAAGTTTGATTGGTGGGATCAAAGAGACTCAAGAAATGATTGATTTTGCAGCAGAACACAATGTAAAGCCTGATATTGAGATCATTCCTATTGATTACGTCAACACAGCGATGGAGCGCCTCCTTAAAGCAGATGTGAAATATCGATTTTTTGAAATGGCAATAGATGCTACTAAACTAGTAGTGTTTCCTAAGAAAGCCTTTGGATGGGCAGCTAGGGACTCTTCTGGTGTTCTATCCCCTTTCCATTTCTTTAGAAGGGAAACAGGTGAGAAAGATGTAGCATTCAAGGTGTTGTATTGTGGGATATGTCACTCTGACCTTCACATTATGCAGAATGAATGGGGCAAAACCACCTATCCATTAGTCCCGGGGCACGAACTTACAGGTGTAGTAACAGAGGTGGGAAGCAAAGTAAAAAAGTTTAAAGTTGGAGACAAAGTAGGGGTGGGATACATGGTCGATTCATGTCGTTCATGCGAAAATTGTGCTGAAGATCTTGAAAATTACTGCCCTAAATATACTCAAACATTCAATGGTAAGTATCGCGATGGCACCATCACCTATGGAGTGTATAGTCCTCTTCGACATTTTGGACTCGACAAGCCTGGTATGAATATAGGAGTTGTTGGTCTTGGTGGACTTGGTCATATGGCTGTGAAATTTGCTAAAGCTTTTGGTGCTAAAGTGACCGTAATTAGTACATCGCCTAAAAAGGAAAAGGAAGCAATAGAACACTTAGGAGCAGACTCGTTTCTTGTAAGCCGCGATCCAGATCAGATGCAGGCTGCAACGAGTACTTTGAATGGCATTATTGACACAGTTTCAGTGAGTCATCCTGTTTTACCATTGATTGGTTTATTGAAATCTAATGGAAAGCTTGTAATGGTTGGTGCAGTAGCAAAGCCTCTAGAGCTTCCTGTATTTTCTTTACTTGGAGGGAGAAAGTCAATAGCTGGAAGTTTAATTGGAGGGATAAAGGAGACACAAGAAATGATTGATTTTGCATCTAAACACAATGTAACTCCTGAGATTGAGGTTGTTCCTATCGATTATGTCAACACAGCAATGGAGCGTCTTGCTAAAGGAGATGTCAAATATCGATTCGTGATTGATATTGGAAATTCATTAAAACCAAGCCCTTAA

Protein sequence

>Msa0761640

MATQPEFEHPKKAFGWAARDSSGVLSPFNFSRRETSEKDVALKVLYCGICHSDLHKAKNEWGTTNYPLVPGHEIVGIVTEVGSKVSKFKVGDRVGVGCLVDSCHSCQNCVDNLENYCPQLTLTDGSKYSDGTSTHGGFSNSMHFVFRIPDELPLDAAAPLLCAGITVYSPLRHFELDKPGMNIGVVGLGGLGHMAVKFAKAFGANVTSHGKLVMVGAPEKPLELPVFPLLAGRKIVAGSLIGGIKETQEMIDFAAEHNVKPDIEIIPIDYVNTAMERLLKADVKYRFFEMAIDATKLVVFPKKAFGWAARDSSGVLSPFHFFRRETGEKDVAFKVLYCGICHSDLHIMQNEWGKTTYPLVPGHELTGVVTEVGSKVKKFKVGDKVGVGYMVDSCRSCENCAEDLENYCPKYTQTFNGKYRDGTITYGVYSPLRHFGLDKPGMNIGVVGLGGLGHMAVKFAKAFGAKVTVISTSPKKEKEAIEHLGADSFLVSRDPDQMQAATSTLNGIIDTVSVSHPVLPLIGLLKSNGKLVMVGAVAKPLELPVFSLLGGRKSIAGSLIGGIKETQEMIDFASKHNVTPEIEVVPIDYVNTAMERLAKGDVKYRFVIDIGNSLKPSP*