Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439550 | XP_003600605.1 | 99.048 | 525 | 5 | 0 | 1 | 525 | 1 | 525 | 0.0 | 1053 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439550 | sp|O62703|CTBL1_BOVIN | 43.878 | 490 | 257 | 10 | 45 | 522 | 77 | 560 | 5.87e-126 | 382 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439550 | G7J7W2 | 99.048 | 525 | 5 | 0 | 1 | 525 | 1 | 525 | 0.0 | 1053 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003720 | Msa1439550 | 0.831772 | 1.381021e-55 | -8.615850e-47 |
| Msa0003890 | Msa1439550 | 0.826878 | 2.129864e-54 | -8.615850e-47 |
| Msa0007440 | Msa1439550 | 0.800688 | 1.281376e-48 | -8.615850e-47 |
| Msa0011960 | Msa1439550 | 0.872966 | 2.117704e-67 | -8.615850e-47 |
| Msa0021220 | Msa1439550 | 0.824807 | 6.608277e-54 | -8.615850e-47 |
| Msa0025730 | Msa1439550 | 0.814268 | 1.679811e-51 | -8.615850e-47 |
| Msa0026710 | Msa1439550 | 0.809172 | 2.158277e-50 | -8.615850e-47 |
| Msa0027770 | Msa1439550 | 0.855686 | 5.339680e-62 | -8.615850e-47 |
| Msa0030200 | Msa1439550 | 0.800146 | 1.652888e-48 | -8.615850e-47 |
| Msa0032090 | Msa1439550 | 0.839748 | 1.316412e-57 | -8.615850e-47 |
| Msa0032430 | Msa1439550 | 0.823771 | 1.157847e-53 | -8.615850e-47 |
| Msa0032580 | Msa1439550 | 0.833191 | 6.145980e-56 | -8.615850e-47 |
| Msa0033110 | Msa1439550 | 0.850574 | 1.554811e-60 | -8.615850e-47 |
| Msa0033260 | Msa1439550 | 0.852337 | 4.930855e-61 | -8.615850e-47 |
| Msa0033950 | Msa1439550 | 0.834017 | 3.822134e-56 | -8.615850e-47 |
| Msa0034030 | Msa1439550 | 0.825003 | 5.941226e-54 | -8.615850e-47 |
| Msa0043660 | Msa1439550 | 0.833035 | 6.718135e-56 | -8.615850e-47 |
| Msa0047160 | Msa1439550 | 0.807364 | 5.241047e-50 | -8.615850e-47 |
| Msa0054440 | Msa1439550 | 0.856563 | 2.956420e-62 | -8.615850e-47 |
| Msa0054480 | Msa1439550 | 0.857006 | 2.189135e-62 | -8.615850e-47 |
| Msa0054750 | Msa1439550 | 0.804447 | 2.151224e-49 | -8.615850e-47 |
| Msa0058300 | Msa1439550 | 0.805253 | 1.459548e-49 | -8.615850e-47 |
| Msa0059040 | Msa1439550 | 0.807234 | 5.584327e-50 | -8.615850e-47 |
| Msa0059110 | Msa1439550 | 0.829104 | 6.202823e-55 | -8.615850e-47 |
| Msa0061080 | Msa1439550 | 0.844090 | 9.377833e-59 | -8.615850e-47 |
| Msa0061630 | Msa1439550 | 0.818459 | 1.938431e-52 | -8.615850e-47 |
| Msa0063530 | Msa1439550 | 0.836768 | 7.710333e-57 | -8.615850e-47 |
| Msa0067630 | Msa1439550 | 0.816230 | 6.155414e-52 | -8.615850e-47 |
| Msa0070700 | Msa1439550 | 0.846190 | 2.537020e-59 | -8.615850e-47 |
| Msa0075500 | Msa1439550 | 0.830819 | 2.368524e-55 | -8.615850e-47 |
| Msa0078900 | Msa1439550 | 0.825322 | 4.993815e-54 | -8.615850e-47 |
| Msa0079380 | Msa1439550 | 0.840963 | 6.334604e-58 | -8.615850e-47 |
| Msa0089820 | Msa1439550 | 0.800316 | 1.525877e-48 | -8.615850e-47 |
| Msa0090360 | Msa1439550 | 0.832743 | 7.942429e-56 | -8.615850e-47 |
| Msa0090520 | Msa1439550 | 0.808087 | 3.678409e-50 | -8.615850e-47 |
| Msa0091410 | Msa1439550 | 0.850016 | 2.229256e-60 | -8.615850e-47 |
| Msa0094470 | Msa1439550 | 0.827524 | 1.491818e-54 | -8.615850e-47 |
| Msa0101590 | Msa1439550 | 0.828166 | 1.045623e-54 | -8.615850e-47 |
| Msa0105620 | Msa1439550 | 0.860656 | 1.774579e-63 | -8.615850e-47 |
| Msa0112770 | Msa1439550 | 0.807089 | 5.993691e-50 | -8.615850e-47 |
| Msa0115130 | Msa1439550 | 0.828313 | 9.637426e-55 | -8.615850e-47 |
| Msa0115400 | Msa1439550 | 0.832136 | 1.122968e-55 | -8.615850e-47 |
| Msa0118590 | Msa1439550 | 0.845956 | 2.939013e-59 | -8.615850e-47 |
| Msa1353980 | Msa1439550 | 0.800714 | 1.266303e-48 | -8.615850e-47 |
| Msa1358250 | Msa1439550 | 0.880803 | 4.060898e-70 | -8.615850e-47 |
| Msa1370070 | Msa1439550 | -0.831169 | 1.944424e-55 | -8.615850e-47 |
| Msa1374060 | Msa1439550 | 0.810859 | 9.348376e-51 | -8.615850e-47 |
| Msa1382560 | Msa1439550 | 0.834011 | 3.835304e-56 | -8.615850e-47 |
| Msa1384880 | Msa1439550 | 0.814083 | 1.845745e-51 | -8.615850e-47 |
| Msa1386780 | Msa1439550 | 0.832574 | 8.746419e-56 | -8.615850e-47 |
| Msa1389800 | Msa1439550 | 0.823967 | 1.041431e-53 | -8.615850e-47 |
| Msa1392780 | Msa1439550 | 0.873285 | 1.655238e-67 | -8.615850e-47 |
| Msa1393570 | Msa1439550 | 0.844174 | 8.902940e-59 | -8.615850e-47 |
| Msa1394290 | Msa1439550 | 0.841752 | 3.927155e-58 | -8.615850e-47 |
| Msa1399550 | Msa1439550 | 0.821311 | 4.319954e-53 | -8.615850e-47 |
| Msa1400220 | Msa1439550 | 0.826674 | 2.382576e-54 | -8.615850e-47 |
| Msa1400580 | Msa1439550 | 0.882757 | 7.966512e-71 | -8.615850e-47 |
| Msa1400870 | Msa1439550 | -0.803348 | 3.638232e-49 | -8.615850e-47 |
| Msa1403340 | Msa1439550 | 0.813231 | 2.841595e-51 | -8.615850e-47 |
| Msa1411750 | Msa1439550 | 0.832621 | 8.515712e-56 | -8.615850e-47 |
| Msa1419870 | Msa1439550 | 0.868146 | 8.109201e-66 | -8.615850e-47 |
| Msa1432420 | Msa1439550 | 0.917820 | 3.329597e-86 | -8.615850e-47 |
| Msa1433390 | Msa1439550 | 0.826801 | 2.222678e-54 | -8.615850e-47 |
| Msa1436520 | Msa1439550 | 0.804619 | 1.980162e-49 | -8.615850e-47 |
| Msa1439550 | Msa1443850 | 0.824755 | 6.795343e-54 | -8.615850e-47 |
| Msa1439550 | Msa1446950 | 0.818507 | 1.890360e-52 | -8.615850e-47 |
| Msa1439550 | Msa1454480 | 0.864015 | 1.647379e-64 | -8.615850e-47 |
| Msa1439550 | Msa1457920 | 0.857398 | 1.677815e-62 | -8.615850e-47 |
| Msa0605000 | Msa1439550 | 0.802435 | 5.617319e-49 | -8.615850e-47 |
| Msa0607050 | Msa1439550 | 0.824834 | 6.511939e-54 | -8.615850e-47 |
| Msa0607910 | Msa1439550 | 0.822890 | 1.859273e-53 | -8.615850e-47 |
| Msa0608500 | Msa1439550 | 0.818865 | 1.568171e-52 | -8.615850e-47 |
| Msa0610430 | Msa1439550 | 0.841689 | 4.079213e-58 | -8.615850e-47 |
| Msa0615440 | Msa1439550 | 0.804758 | 1.852599e-49 | -8.615850e-47 |
| Msa0615490 | Msa1439550 | 0.845060 | 5.137959e-59 | -8.615850e-47 |
| Msa0615710 | Msa1439550 | 0.818555 | 1.843941e-52 | -8.615850e-47 |
| Msa0617640 | Msa1439550 | 0.835090 | 2.054312e-56 | -8.615850e-47 |
| Msa0623790 | Msa1439550 | 0.810449 | 1.146327e-50 | -8.615850e-47 |
| Msa0625720 | Msa1439550 | 0.849982 | 2.278645e-60 | -8.615850e-47 |
| Msa0636070 | Msa1439550 | 0.829400 | 5.258588e-55 | -8.615850e-47 |
| Msa0643060 | Msa1439550 | 0.831053 | 2.075997e-55 | -8.615850e-47 |
| Msa0643350 | Msa1439550 | 0.819571 | 1.083071e-52 | -8.615850e-47 |
| Msa0643560 | Msa1439550 | 0.815439 | 9.237836e-52 | -8.615850e-47 |
| Msa0647500 | Msa1439550 | 0.833220 | 6.045249e-56 | -8.615850e-47 |
| Msa0649020 | Msa1439550 | 0.814131 | 1.801401e-51 | -8.615850e-47 |
| Msa0649050 | Msa1439550 | 0.801425 | 9.058019e-49 | -8.615850e-47 |
| Msa0649490 | Msa1439550 | 0.816434 | 5.540824e-52 | -8.615850e-47 |
| Msa0650050 | Msa1439550 | -0.807939 | 3.955838e-50 | -8.615850e-47 |
| Msa0660490 | Msa1439550 | 0.825530 | 4.457843e-54 | -8.615850e-47 |
| Msa0663390 | Msa1439550 | 0.856460 | 3.170314e-62 | -8.615850e-47 |
| Msa0675410 | Msa1439550 | 0.809313 | 2.012300e-50 | -8.615850e-47 |
| Msa0682810 | Msa1439550 | 0.805903 | 1.066362e-49 | -8.615850e-47 |
| Msa0683170 | Msa1439550 | 0.824904 | 6.268142e-54 | -8.615850e-47 |
| Msa0685140 | Msa1439550 | 0.848434 | 6.144476e-60 | -8.615850e-47 |
| Msa0688960 | Msa1439550 | 0.811091 | 8.325855e-51 | -8.615850e-47 |
| Msa0689260 | Msa1439550 | 0.880062 | 7.480195e-70 | -8.615850e-47 |
| Msa0690150 | Msa1439550 | 0.825999 | 3.451141e-54 | -8.615850e-47 |
| Msa0690860 | Msa1439550 | 0.840975 | 6.290271e-58 | -8.615850e-47 |
| Msa0691290 | Msa1439550 | 0.821788 | 3.351698e-53 | -8.615850e-47 |
| Msa0692040 | Msa1439550 | -0.803317 | 3.693276e-49 | -8.615850e-47 |
| Msa0692830 | Msa1439550 | 0.862543 | 4.705429e-64 | -8.615850e-47 |
| Msa0692950 | Msa1439550 | 0.857762 | 1.308460e-62 | -8.615850e-47 |
| Msa0698490 | Msa1439550 | 0.809916 | 1.493222e-50 | -8.615850e-47 |
| Msa0698540 | Msa1439550 | 0.854224 | 1.419074e-61 | -8.615850e-47 |
| Msa0698660 | Msa1439550 | 0.806005 | 1.014987e-49 | -8.615850e-47 |
| Msa0698800 | Msa1439550 | 0.820600 | 6.296607e-53 | -8.615850e-47 |
| Msa0707250 | Msa1439550 | 0.837777 | 4.254273e-57 | -8.615850e-47 |
| Msa0709400 | Msa1439550 | 0.802586 | 5.228468e-49 | -8.615850e-47 |
| Msa0711780 | Msa1439550 | 0.891386 | 4.166479e-74 | -8.615850e-47 |
| Msa0715650 | Msa1439550 | 0.807846 | 4.139967e-50 | -8.615850e-47 |
| Msa0715700 | Msa1439550 | 0.833572 | 4.938687e-56 | -8.615850e-47 |
| Msa0716830 | Msa1439550 | 0.808594 | 2.868396e-50 | -8.615850e-47 |
| Msa0719420 | Msa1439550 | 0.800144 | 1.654350e-48 | -8.615850e-47 |
| Msa0727550 | Msa1439550 | 0.843894 | 1.058059e-58 | -8.615850e-47 |
| Msa0741440 | Msa1439550 | 0.801435 | 9.015523e-49 | -8.615850e-47 |
| Msa0745740 | Msa1439550 | 0.813110 | 3.020978e-51 | -8.615850e-47 |
| Msa0757830 | Msa1439550 | 0.819012 | 1.452375e-52 | -8.615850e-47 |
| Msa0772480 | Msa1439550 | 0.842228 | 2.939120e-58 | -8.615850e-47 |
| Msa0788850 | Msa1439550 | 0.854854 | 9.327717e-62 | -8.615850e-47 |
| Msa0789680 | Msa1439550 | 0.801470 | 8.869335e-49 | -8.615850e-47 |
| Msa0793800 | Msa1439550 | 0.807050 | 6.107703e-50 | -8.615850e-47 |
| Msa0794670 | Msa1439550 | 0.882514 | 9.776127e-71 | -8.615850e-47 |
| Msa0798440 | Msa1439550 | 0.844206 | 8.729120e-59 | -8.615850e-47 |
| Msa0802410 | Msa1439550 | 0.813279 | 2.773994e-51 | -8.615850e-47 |
| Msa0808270 | Msa1439550 | 0.801685 | 8.011566e-49 | -8.615850e-47 |
| Msa0830540 | Msa1439550 | 0.869663 | 2.616392e-66 | -8.615850e-47 |
| Msa0831530 | Msa1439550 | 0.837496 | 5.021900e-57 | -8.615850e-47 |
| Msa0123360 | Msa1439550 | 0.847919 | 8.524218e-60 | -8.615850e-47 |
| Msa0126610 | Msa1439550 | 0.816362 | 5.749951e-52 | -8.615850e-47 |
| Msa0127020 | Msa1439550 | 0.887108 | 1.905069e-72 | -8.615850e-47 |
| Msa0137550 | Msa1439550 | 0.837250 | 5.806759e-57 | -8.615850e-47 |
| Msa0137840 | Msa1439550 | 0.824888 | 6.324454e-54 | -8.615850e-47 |
| Msa0137990 | Msa1439550 | 0.807637 | 4.587085e-50 | -8.615850e-47 |
| Msa0139350 | Msa1439550 | 0.842916 | 1.930042e-58 | -8.615850e-47 |
| Msa0141660 | Msa1439550 | 0.802350 | 5.848442e-49 | -8.615850e-47 |
| Msa0144370 | Msa1439550 | 0.854487 | 1.191415e-61 | -8.615850e-47 |
| Msa0145440 | Msa1439550 | 0.836365 | 9.765355e-57 | -8.615850e-47 |
| Msa0146280 | Msa1439550 | 0.810390 | 1.180544e-50 | -8.615850e-47 |
| Msa0150300 | Msa1439550 | 0.845132 | 4.913546e-59 | -8.615850e-47 |
| Msa0150820 | Msa1439550 | 0.833215 | 6.062390e-56 | -8.615850e-47 |
| Msa0159170 | Msa1439550 | 0.854984 | 8.550911e-62 | -8.615850e-47 |
| Msa0159340 | Msa1439550 | 0.813283 | 2.768370e-51 | -8.615850e-47 |
| Msa0160550 | Msa1439550 | 0.817006 | 4.124019e-52 | -8.615850e-47 |
| Msa0162130 | Msa1439550 | 0.801197 | 1.008839e-48 | -8.615850e-47 |
| Msa0165660 | Msa1439550 | 0.802480 | 5.498838e-49 | -8.615850e-47 |
| Msa0168230 | Msa1439550 | 0.859675 | 3.510067e-63 | -8.615850e-47 |
| Msa0169280 | Msa1439550 | 0.884719 | 1.507674e-71 | -8.615850e-47 |
| Msa0170200 | Msa1439550 | 0.801464 | 8.895776e-49 | -8.615850e-47 |
| Msa0171540 | Msa1439550 | 0.837712 | 4.420132e-57 | -8.615850e-47 |
| Msa0172070 | Msa1439550 | 0.822386 | 2.434975e-53 | -8.615850e-47 |
| Msa0172970 | Msa1439550 | 0.825217 | 5.287217e-54 | -8.615850e-47 |
| Msa0183900 | Msa1439550 | 0.800291 | 1.543726e-48 | -8.615850e-47 |
| Msa0184040 | Msa1439550 | 0.833043 | 6.690514e-56 | -8.615850e-47 |
| Msa0187120 | Msa1439550 | 0.832572 | 8.756654e-56 | -8.615850e-47 |
| Msa0189300 | Msa1439550 | 0.838866 | 2.229992e-57 | -8.615850e-47 |
| Msa0189320 | Msa1439550 | 0.803894 | 2.803845e-49 | -8.615850e-47 |
| Msa0212930 | Msa1439550 | 0.803487 | 3.405515e-49 | -8.615850e-47 |
| Msa0220720 | Msa1439550 | 0.825062 | 5.751820e-54 | -8.615850e-47 |
| Msa0223160 | Msa1439550 | 0.802631 | 5.120108e-49 | -8.615850e-47 |
| Msa0228070 | Msa1439550 | 0.808485 | 3.026911e-50 | -8.615850e-47 |
| Msa0231660 | Msa1439550 | 0.809022 | 2.323808e-50 | -8.615850e-47 |
| Msa1224810 | Msa1439550 | 0.819986 | 8.706839e-53 | -8.615850e-47 |
| Msa1231840 | Msa1439550 | 0.826836 | 2.179982e-54 | -8.615850e-47 |
| Msa1237630 | Msa1439550 | 0.828025 | 1.130555e-54 | -8.615850e-47 |
| Msa1245930 | Msa1439550 | 0.882360 | 1.111709e-70 | -8.615850e-47 |
| Msa1254730 | Msa1439550 | 0.813287 | 2.762728e-51 | -8.615850e-47 |
| Msa1259060 | Msa1439550 | 0.880639 | 4.652041e-70 | -8.615850e-47 |
| Msa1262720 | Msa1439550 | 0.835414 | 1.701157e-56 | -8.615850e-47 |
| Msa1263750 | Msa1439550 | 0.841190 | 5.522922e-58 | -8.615850e-47 |
| Msa1263790 | Msa1439550 | 0.820345 | 7.204648e-53 | -8.615850e-47 |
| Msa1265630 | Msa1439550 | 0.810833 | 9.470473e-51 | -8.615850e-47 |
| Msa1266990 | Msa1439550 | 0.817250 | 3.634185e-52 | -8.615850e-47 |
| Msa1274560 | Msa1439550 | 0.823429 | 1.391694e-53 | -8.615850e-47 |
| Msa1287460 | Msa1439550 | 0.817310 | 3.523153e-52 | -8.615850e-47 |
| Msa1294820 | Msa1439550 | 0.817540 | 3.128089e-52 | -8.615850e-47 |
| Msa1296760 | Msa1439550 | 0.800784 | 1.225023e-48 | -8.615850e-47 |
| Msa1302380 | Msa1439550 | 0.806313 | 8.739628e-50 | -8.615850e-47 |
| Msa1302640 | Msa1439550 | 0.831342 | 1.762830e-55 | -8.615850e-47 |
| Msa1305660 | Msa1439550 | 0.806513 | 7.930027e-50 | -8.615850e-47 |
| Msa1306920 | Msa1439550 | 0.819099 | 1.387478e-52 | -8.615850e-47 |
| Msa1312520 | Msa1439550 | 0.814507 | 1.487283e-51 | -8.615850e-47 |
| Msa1331000 | Msa1439550 | 0.823578 | 1.284652e-53 | -8.615850e-47 |
| Msa1332590 | Msa1439550 | 0.840471 | 8.523378e-58 | -8.615850e-47 |
| Msa1342410 | Msa1439550 | 0.828138 | 1.062003e-54 | -8.615850e-47 |
| Msa0366890 | Msa1439550 | 0.815835 | 7.542783e-52 | -8.615850e-47 |
| Msa0383800 | Msa1439550 | 0.854119 | 1.521624e-61 | -8.615850e-47 |
| Msa0385580 | Msa1439550 | 0.815716 | 8.015197e-52 | -8.615850e-47 |
| Msa0388700 | Msa1439550 | 0.876741 | 1.096842e-68 | -8.615850e-47 |
| Msa0395820 | Msa1439550 | 0.808830 | 2.554525e-50 | -8.615850e-47 |
| Msa0397540 | Msa1439550 | 0.820155 | 7.962878e-53 | -8.615850e-47 |
| Msa0398670 | Msa1439550 | 0.803520 | 3.352694e-49 | -8.615850e-47 |
| Msa0402650 | Msa1439550 | 0.844574 | 6.948280e-59 | -8.615850e-47 |
| Msa0402790 | Msa1439550 | 0.831787 | 1.369419e-55 | -8.615850e-47 |
| Msa0411430 | Msa1439550 | 0.803444 | 3.475311e-49 | -8.615850e-47 |
| Msa0422400 | Msa1439550 | 0.802434 | 5.620677e-49 | -8.615850e-47 |
| Msa0428020 | Msa1439550 | 0.815625 | 8.398696e-52 | -8.615850e-47 |
| Msa0428060 | Msa1439550 | 0.822679 | 2.082599e-53 | -8.615850e-47 |
| Msa0433640 | Msa1439550 | 0.804263 | 2.349322e-49 | -8.615850e-47 |
| Msa0434180 | Msa1439550 | 0.846346 | 2.301277e-59 | -8.615850e-47 |
| Msa0449210 | Msa1439550 | 0.854081 | 1.561123e-61 | -8.615850e-47 |
| Msa0474400 | Msa1439550 | 0.808553 | 2.926188e-50 | -8.615850e-47 |
| Msa0481530 | Msa1439550 | 0.857572 | 1.489974e-62 | -8.615850e-47 |
| Msa0482130 | Msa1439550 | 0.871460 | 6.722015e-67 | -8.615850e-47 |
| Msa0987370 | Msa1439550 | 0.840846 | 6.797909e-58 | -8.615850e-47 |
| Msa0989540 | Msa1439550 | 0.852756 | 3.746254e-61 | -8.615850e-47 |
| Msa0999970 | Msa1439550 | 0.852688 | 3.917031e-61 | -8.615850e-47 |
| Msa1003320 | Msa1439550 | 0.803701 | 3.075197e-49 | -8.615850e-47 |
| Msa1003620 | Msa1439550 | 0.819844 | 9.382339e-53 | -8.615850e-47 |
| Msa1009820 | Msa1439550 | 0.836584 | 8.587836e-57 | -8.615850e-47 |
| Msa1013400 | Msa1439550 | 0.800652 | 1.303546e-48 | -8.615850e-47 |
| Msa1030620 | Msa1439550 | 0.816534 | 5.263118e-52 | -8.615850e-47 |
| Msa1041850 | Msa1439550 | 0.807783 | 4.270187e-50 | -8.615850e-47 |
| Msa1046460 | Msa1439550 | 0.819721 | 1.000865e-52 | -8.615850e-47 |
| Msa1051200 | Msa1439550 | 0.858475 | 8.032380e-63 | -8.615850e-47 |
| Msa1077030 | Msa1439550 | 0.814654 | 1.380388e-51 | -8.615850e-47 |
| Msa1080270 | Msa1439550 | 0.809211 | 2.116464e-50 | -8.615850e-47 |
| Msa1081930 | Msa1439550 | 0.809452 | 1.879379e-50 | -8.615850e-47 |
| Msa1082810 | Msa1439550 | 0.808491 | 3.016959e-50 | -8.615850e-47 |
| Msa1087710 | Msa1439550 | 0.807442 | 5.043787e-50 | -8.615850e-47 |
| Msa1088640 | Msa1439550 | 0.806897 | 6.579166e-50 | -8.615850e-47 |
| Msa1089460 | Msa1439550 | 0.800222 | 1.594467e-48 | -8.615850e-47 |
| Msa1091940 | Msa1439550 | 0.818633 | 1.770050e-52 | -8.615850e-47 |
| Msa1093530 | Msa1439550 | 0.804292 | 2.317181e-49 | -8.615850e-47 |
| Msa1104140 | Msa1439550 | 0.808522 | 2.971479e-50 | -8.615850e-47 |
| Msa1106700 | Msa1439550 | 0.846851 | 1.674766e-59 | -8.615850e-47 |
| Msa0241390 | Msa1439550 | 0.850070 | 2.153759e-60 | -8.615850e-47 |
| Msa0241470 | Msa1439550 | 0.842772 | 2.108719e-58 | -8.615850e-47 |
| Msa0242410 | Msa1439550 | 0.814737 | 1.322937e-51 | -8.615850e-47 |
| Msa0253200 | Msa1439550 | 0.801792 | 7.618936e-49 | -8.615850e-47 |
| Msa0271530 | Msa1439550 | 0.809401 | 1.927258e-50 | -8.615850e-47 |
| Msa0279220 | Msa1439550 | 0.889419 | 2.463752e-73 | -8.615850e-47 |
| Msa0279240 | Msa1439550 | 0.897909 | 8.898453e-77 | -8.615850e-47 |
| Msa0292030 | Msa1439550 | 0.806700 | 7.243173e-50 | -8.615850e-47 |
| Msa0299870 | Msa1439550 | 0.827762 | 1.307745e-54 | -8.615850e-47 |
| Msa0309750 | Msa1439550 | 0.844508 | 7.238828e-59 | -8.615850e-47 |
| Msa0309770 | Msa1439550 | 0.842341 | 2.743252e-58 | -8.615850e-47 |
| Msa0318980 | Msa1439550 | 0.895114 | 1.303145e-75 | -8.615850e-47 |
| Msa0330310 | Msa1439550 | 0.800287 | 1.547192e-48 | -8.615850e-47 |
| Msa0335730 | Msa1439550 | 0.827883 | 1.223253e-54 | -8.615850e-47 |
| Msa0337240 | Msa1439550 | 0.813422 | 2.580389e-51 | -8.615850e-47 |
| Msa0344540 | Msa1439550 | 0.802137 | 6.471133e-49 | -8.615850e-47 |
| Msa0345200 | Msa1439550 | 0.852469 | 4.522273e-61 | -8.615850e-47 |
| Msa0345350 | Msa1439550 | 0.837498 | 5.015974e-57 | -8.615850e-47 |
| Msa0345390 | Msa1439550 | 0.812108 | 5.005148e-51 | -8.615850e-47 |
| Msa0351990 | Msa1439550 | 0.814109 | 1.821359e-51 | -8.615850e-47 |
| Msa0357900 | Msa1439550 | 0.809323 | 2.002524e-50 | -8.615850e-47 |
| Msa1109680 | Msa1439550 | 0.836039 | 1.181617e-56 | -8.615850e-47 |
| Msa1124960 | Msa1439550 | 0.802607 | 5.178672e-49 | -8.615850e-47 |
| Msa1128570 | Msa1439550 | 0.827237 | 1.748272e-54 | -8.615850e-47 |
| Msa1128600 | Msa1439550 | 0.800399 | 1.467987e-48 | -8.615850e-47 |
| Msa1137700 | Msa1439550 | 0.860379 | 2.151980e-63 | -8.615850e-47 |
| Msa1148910 | Msa1439550 | 0.812055 | 5.139232e-51 | -8.615850e-47 |
| Msa1160590 | Msa1439550 | 0.878990 | 1.794910e-69 | -8.615850e-47 |
| Msa1162270 | Msa1439550 | 0.814469 | 1.516551e-51 | -8.615850e-47 |
| Msa1165940 | Msa1439550 | 0.808484 | 3.027174e-50 | -8.615850e-47 |
| Msa1167340 | Msa1439550 | 0.820541 | 6.494848e-53 | -8.615850e-47 |
| Msa1174470 | Msa1439550 | 0.818841 | 1.587853e-52 | -8.615850e-47 |
| Msa1180500 | Msa1439550 | 0.810649 | 1.037563e-50 | -8.615850e-47 |
| Msa1181250 | Msa1439550 | 0.877550 | 5.741832e-69 | -8.615850e-47 |
| Msa1181330 | Msa1439550 | 0.863791 | 1.934165e-64 | -8.615850e-47 |
| Msa1181910 | Msa1439550 | 0.833609 | 4.832862e-56 | -8.615850e-47 |
| Msa1204530 | Msa1439550 | 0.826713 | 2.333068e-54 | -8.615850e-47 |
| Msa1204630 | Msa1439550 | 0.814644 | 1.386788e-51 | -8.615850e-47 |
| Msa1208880 | Msa1439550 | 0.885846 | 5.718257e-72 | -8.615850e-47 |
| Msa1209200 | Msa1439550 | 0.853052 | 3.082094e-61 | -8.615850e-47 |
| Msa1209260 | Msa1439550 | 0.848729 | 5.091000e-60 | -8.615850e-47 |
| Msa1209760 | Msa1439550 | 0.847486 | 1.121508e-59 | -8.615850e-47 |
| Msa0483850 | Msa1439550 | 0.818762 | 1.655211e-52 | -8.615850e-47 |
| Msa0487800 | Msa1439550 | 0.800550 | 1.367435e-48 | -8.615850e-47 |
| Msa0493410 | Msa1439550 | 0.855188 | 7.457292e-62 | -8.615850e-47 |
| Msa0497210 | Msa1439550 | 0.803622 | 3.192984e-49 | -8.615850e-47 |
| Msa0497490 | Msa1439550 | 0.846852 | 1.673641e-59 | -8.615850e-47 |
| Msa0510350 | Msa1439550 | 0.821463 | 3.983896e-53 | -8.615850e-47 |
| Msa0512340 | Msa1439550 | 0.823030 | 1.724879e-53 | -8.615850e-47 |
| Msa0516260 | Msa1439550 | 0.838340 | 3.047768e-57 | -8.615850e-47 |
| Msa0522070 | Msa1439550 | 0.813005 | 3.185966e-51 | -8.615850e-47 |
| Msa0529890 | Msa1439550 | 0.851397 | 9.116918e-61 | -8.615850e-47 |
| Msa0539410 | Msa1439550 | 0.814410 | 1.562475e-51 | -8.615850e-47 |
| Msa0541360 | Msa1439550 | 0.803570 | 3.273515e-49 | -8.615850e-47 |
| Msa0541410 | Msa1439550 | 0.803577 | 3.261740e-49 | -8.615850e-47 |
| Msa0542090 | Msa1439550 | 0.863091 | 3.188436e-64 | -8.615850e-47 |
| Msa0542130 | Msa1439550 | 0.864156 | 1.488818e-64 | -8.615850e-47 |
| Msa0548240 | Msa1439550 | 0.832515 | 9.047058e-56 | -8.615850e-47 |
| Msa0554920 | Msa1439550 | 0.808557 | 2.920735e-50 | -8.615850e-47 |
| Msa0555450 | Msa1439550 | 0.809764 | 1.610312e-50 | -8.615850e-47 |
| Msa0556060 | Msa1439550 | 0.824682 | 7.070139e-54 | -8.615850e-47 |
| Msa0572840 | Msa1439550 | 0.818725 | 1.687415e-52 | -8.615850e-47 |
| Msa0581280 | Msa1439550 | 0.835938 | 1.253553e-56 | -8.615850e-47 |
| Msa0585560 | Msa1439550 | 0.851174 | 1.053963e-60 | -8.615850e-47 |
| Msa0590990 | Msa1439550 | 0.804654 | 1.946883e-49 | -8.615850e-47 |
| Msa0592440 | Msa1439550 | 0.810886 | 9.222948e-51 | -8.615850e-47 |
| Msa0602690 | Msa1439550 | 0.801915 | 7.187673e-49 | -8.615850e-47 |
| Msa0856910 | Msa1439550 | 0.802501 | 5.445428e-49 | -8.615850e-47 |
| Msa0862530 | Msa1439550 | 0.805748 | 1.149085e-49 | -8.615850e-47 |
| Msa0867220 | Msa1439550 | 0.843660 | 1.222016e-58 | -8.615850e-47 |
| Msa0871270 | Msa1439550 | 0.801985 | 6.953819e-49 | -8.615850e-47 |
| Msa0876810 | Msa1439550 | 0.850214 | 1.961793e-60 | -8.615850e-47 |
| Msa0900110 | Msa1439550 | 0.806018 | 1.008352e-49 | -8.615850e-47 |
| Msa0902760 | Msa1439550 | 0.800062 | 1.718481e-48 | -8.615850e-47 |
| Msa0909110 | Msa1439550 | 0.803641 | 3.164583e-49 | -8.615850e-47 |
| Msa0926850 | Msa1439550 | 0.813786 | 2.145586e-51 | -8.615850e-47 |
| Msa0938220 | Msa1439550 | 0.811786 | 5.880932e-51 | -8.615850e-47 |
| Msa0945440 | Msa1439550 | 0.848007 | 8.060129e-60 | -8.615850e-47 |
| Msa0968590 | Msa1439550 | 0.801287 | 9.669976e-49 | -8.615850e-47 |
| Msa0969340 | Msa1439550 | 0.803472 | 3.430134e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439550 | MtrunA17_Chr3g0109531 | 99.048 | 525 | 5 | 0 | 1 | 525 | 1 | 525 | 0.0 | 1053 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439550 | AT3G02710.1 | 75.614 | 529 | 125 | 2 | 1 | 525 | 1 | 529 | 0.0 | 787 |
Find 137 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTAGTTGCTTCATTATT+TGG | 0.121094 | tig0028819:-14530 | Msa1439550:intron |
| TCAGTTGGTTGCTGTCATTT+TGG | 0.177787 | tig0028819:-13289 | Msa1439550:intron |
| AAAGATTCAGAAGTTCTTAA+TGG | 0.254674 | tig0028819:-12861 | Msa1439550:CDS |
| TGATGTTGTTACGTTGATTC+AGG | 0.256713 | tig0028819:-15416 | Msa1439550:CDS |
| GTGGCTGTTGGGGAAGATTA+AGG | 0.265756 | tig0028819:-15161 | Msa1439550:CDS |
| GCAGTATGCATCGGAGATTT+TGG | 0.271538 | tig0028819:-15116 | Msa1439550:CDS |
| GTTGATGCCGTTGGAGAATA+AGG | 0.287924 | tig0028819:-14933 | Msa1439550:CDS |
| TATTATGAAGCAGAAGAAAT+TGG | 0.295478 | tig0028819:-14870 | Msa1439550:CDS |
| TTCGATTTCTGTATTTATAC+TGG | 0.299006 | tig0028819:-12652 | Msa1439550:three_prime_UTR |
| TAAGCTTGTGAAGCTCTTCA+TGG | 0.319731 | tig0028819:+15542 | None:intergenic |
| ATCTGGACTTTATACTCTTC+AGG | 0.322599 | tig0028819:-13608 | Msa1439550:intron |
| GCGAATCGTTCGGGTTGATT+AGG | 0.325409 | tig0028819:+15583 | None:intergenic |
| TAGGAATATCATGACAATAT+TGG | 0.328004 | tig0028819:-12923 | Msa1439550:CDS |
| CTCTTCCTCATCCGAACTCT+TGG | 0.328264 | tig0028819:+14991 | None:intergenic |
| CTTAACAGTGTAAACTTCAT+TGG | 0.328577 | tig0028819:-12819 | Msa1439550:three_prime_UTR |
| TGTGCTCGCTCCTTCTCTTC+TGG | 0.344836 | tig0028819:+12887 | None:intergenic |
| CACAAGCTTAAAGTTCTTGC+TGG | 0.345339 | tig0028819:-15529 | Msa1439550:CDS |
| GACAATATTGGCGATCTTGA+TGG | 0.349058 | tig0028819:-12911 | Msa1439550:CDS |
| TCGGAATCCGCGAATCGTTC+GGG | 0.352290 | tig0028819:+15574 | None:intergenic |
| TACGGCGAATCAGAAGAAAT+TGG | 0.359095 | tig0028819:-15074 | Msa1439550:CDS |
| GGATGAGCGGTTGCGGGTGG+TGG | 0.364644 | tig0028819:+15783 | None:intergenic |
| GACGGCGTCGATTGTGGGTT+GGG | 0.368993 | tig0028819:+15684 | None:intergenic |
| TACAATCGTAAACTAGAATC+TGG | 0.374374 | tig0028819:-13625 | Msa1439550:CDS |
| TTCGGAATCCGCGAATCGTT+CGG | 0.376786 | tig0028819:+15573 | None:intergenic |
| TGAGCGGTTGCGGGTGGTGG+TGG | 0.378306 | tig0028819:+15786 | None:intergenic |
| TTGTCGACGGCGTCGATTGT+GGG | 0.383086 | tig0028819:+15679 | None:intergenic |
| TGGCGTATGCCTCCGCGATA+AGG | 0.396871 | tig0028819:-14850 | Msa1439550:CDS |
| CCCCACTAAACCTCTCATTA+GGG | 0.397176 | tig0028819:-15838 | Msa1439550:five_prime_UTR |
| ACGGCGAATCAGAAGAAATT+GGG | 0.402285 | tig0028819:-15073 | Msa1439550:CDS |
| GCGTTTGGATGAGCGGTTGC+GGG | 0.408371 | tig0028819:+15777 | None:intergenic |
| AAGAAATTGGGGCAGATGAA+TGG | 0.410742 | tig0028819:-15061 | Msa1439550:CDS |
| ATGGCATTATAACTGTTGTA+AGG | 0.413293 | tig0028819:-12842 | Msa1439550:exon |
| TGGGGTGGATGTGATGCTTC+AGG | 0.413573 | tig0028819:-15041 | Msa1439550:CDS |
| ACGATTCGCGGATTCCGAAT+TGG | 0.425378 | tig0028819:-15569 | Msa1439550:CDS |
| AACGGTCTAAAATTGCTAGA+TGG | 0.425766 | tig0028819:+12576 | None:intergenic |
| AGAAATTGGGGCAGATGAAT+GGG | 0.428528 | tig0028819:-15060 | Msa1439550:CDS |
| GCATGTCAAGGATATACTTC+AGG | 0.429337 | tig0028819:-13094 | Msa1439550:intron |
| CGGTTGCGGGTGGTGGTGGA+TGG | 0.435184 | tig0028819:+15790 | None:intergenic |
| GCAGAATTTGCATCGGTTGT+CGG | 0.443160 | tig0028819:-15299 | Msa1439550:CDS |
| ATGAGTGCGAGAAGATAGAT+AGG | 0.444249 | tig0028819:-14022 | Msa1439550:CDS |
| GGATGTGATGCTTCAGGCGG+TGG | 0.444743 | tig0028819:-15035 | Msa1439550:CDS |
| TAATCAACCCGAACGATTCG+CGG | 0.445441 | tig0028819:-15581 | Msa1439550:CDS |
| TCAAGACAACTCCCTGCCCC+TGG | 0.447091 | tig0028819:+12610 | None:intergenic |
| CGACGGCGTCGATTGTGGGT+TGG | 0.448251 | tig0028819:+15683 | None:intergenic |
| TTCTGCCACTACCTCAGCTC+AGG | 0.448731 | tig0028819:+15891 | None:intergenic |
| CTCTTCATGGAGCTCCAATT+CGG | 0.450268 | tig0028819:+15555 | None:intergenic |
| TGAGGTGAAACCGGCGGTGG+CGG | 0.453475 | tig0028819:-15215 | Msa1439550:CDS |
| TGTTGGGGAAGATTAAGGTT+AGG | 0.455452 | tig0028819:-15156 | Msa1439550:CDS |
| GGCGTATGCCTCCGCGATAA+GGG | 0.458877 | tig0028819:-14849 | Msa1439550:CDS |
| CGAGAAGATAGATAGGCTAA+TGG | 0.461422 | tig0028819:-14015 | Msa1439550:CDS |
| GTCAAAGGATCCCAAGAGTT+CGG | 0.461662 | tig0028819:-15002 | Msa1439550:CDS |
| ACGGTACCAGGAGGAGTTAG+AGG | 0.461982 | tig0028819:-14564 | Msa1439550:CDS |
| TAAAGCCTGAGCTGAGGTAG+TGG | 0.464349 | tig0028819:-15896 | Msa1439550:five_prime_UTR |
| GAATTTGATTGAGGTGAAAC+CGG | 0.464918 | tig0028819:-15224 | Msa1439550:CDS |
| TGGAGCACCGGAGCTTTATC+CGG | 0.467966 | tig0028819:-15509 | Msa1439550:CDS |
| TCTTCCTCATCCGAACTCTT+GGG | 0.471486 | tig0028819:+14992 | None:intergenic |
| TTCTTTCAATCGGCGTTCGA+AGG | 0.471752 | tig0028819:+15630 | None:intergenic |
| TCAAATTGAGTTTGATGACT+TGG | 0.471831 | tig0028819:-13756 | Msa1439550:CDS |
| TTCGGATGAGGAAGAGATGG+TGG | 0.473430 | tig0028819:-14984 | Msa1439550:CDS |
| GTGGAATCTTGAGGGGCTCT+AGG | 0.483156 | tig0028819:-14076 | Msa1439550:CDS |
| AAGTTGTTGAAGTGGCTGTT+GGG | 0.484456 | tig0028819:-15172 | Msa1439550:CDS |
| AACCCTAATGAGAGGTTTAG+TGG | 0.484808 | tig0028819:+15836 | None:intergenic |
| CTTTCCAGGTGGAATCTTGA+GGG | 0.489985 | tig0028819:-14084 | Msa1439550:intron |
| TGCGTTTGGATGAGCGGTTG+CGG | 0.491992 | tig0028819:+15776 | None:intergenic |
| GGTGTCGTTGAATTTGCGTT+TGG | 0.492933 | tig0028819:+15762 | None:intergenic |
| TTCGCTCCTCTAACTCCTCC+TGG | 0.495355 | tig0028819:+14558 | None:intergenic |
| GTTGTCGACGGCGTCGATTG+TGG | 0.497342 | tig0028819:+15678 | None:intergenic |
| GGTTCTTGTTGATGCGCTTG+TGG | 0.498065 | tig0028819:-15347 | Msa1439550:CDS |
| GTTGGGGAAGATTAAGGTTA+GGG | 0.503090 | tig0028819:-15155 | Msa1439550:CDS |
| GGCTAATGGAACTATACATC+AGG | 0.506522 | tig0028819:-14001 | Msa1439550:intron |
| TTTACATGCATTAGGAAAGA+GGG | 0.508229 | tig0028819:+12768 | None:intergenic |
| AAAAGCTGAAACTGAACGGT+TGG | 0.509025 | tig0028819:-13780 | Msa1439550:CDS |
| ACATTGAGGTTAACAAGATC+CGG | 0.510454 | tig0028819:+15490 | None:intergenic |
| TGCGATGACAAATTACCCTC+CGG | 0.510486 | tig0028819:-14816 | Msa1439550:CDS |
| TAAAGTTCTTGCTGGAGCAC+CGG | 0.510985 | tig0028819:-15521 | Msa1439550:CDS |
| TTTGCATCGGTTGTCGGAGA+AGG | 0.512034 | tig0028819:-15293 | Msa1439550:CDS |
| AACCTTTCCTTATTCTCCAA+CGG | 0.513307 | tig0028819:+14926 | None:intergenic |
| ACCCTAATGAGAGGTTTAGT+GGG | 0.520452 | tig0028819:+15837 | None:intergenic |
| CAAGACAACTCCCTGCCCCT+GGG | 0.523128 | tig0028819:+12611 | None:intergenic |
| AGAGAGATCGATGTCGTTGG+TGG | 0.524918 | tig0028819:+15729 | None:intergenic |
| GAAAGGTTTGTGAAAGCAGA+AGG | 0.526602 | tig0028819:-14911 | Msa1439550:CDS |
| GAGATCGATGTCGTTGGTGG+AGG | 0.529331 | tig0028819:+15732 | None:intergenic |
| GAACAAGAAAGAACGGTACC+AGG | 0.534798 | tig0028819:-14576 | Msa1439550:CDS |
| AATTGAGTTTGATGACTTGG+AGG | 0.536575 | tig0028819:-13753 | Msa1439550:intron |
| GACAATTGAGAATTTGATTG+AGG | 0.537691 | tig0028819:-15233 | Msa1439550:CDS |
| ATGTTGTTTGTTGATGCCGT+TGG | 0.538373 | tig0028819:-14942 | Msa1439550:CDS |
| TTTCAAATCTTCAACAACAA+TGG | 0.543527 | tig0028819:-15815 | Msa1439550:exon |
| TCTTTCCAGGTGGAATCTTG+AGG | 0.544919 | tig0028819:-14085 | Msa1439550:intron |
| GCATCAACAAGAACCTTAGC+AGG | 0.545350 | tig0028819:+15355 | None:intergenic |
| GGATCCCAAGAGTTCGGATG+AGG | 0.548449 | tig0028819:-14996 | Msa1439550:CDS |
| TGAATTTGCGTTTGGATGAG+CGG | 0.551592 | tig0028819:+15770 | None:intergenic |
| GTCGTTGGTGGAGGATGAAA+CGG | 0.556914 | tig0028819:+15741 | None:intergenic |
| GAAGTTGTTGAAGTGGCTGT+TGG | 0.565011 | tig0028819:-15173 | Msa1439550:CDS |
| CAGACAATCTCCGCCACCGC+CGG | 0.566151 | tig0028819:+15205 | None:intergenic |
| TCGGTTGTCGGAGAAGGATG+CGG | 0.566965 | tig0028819:-15287 | Msa1439550:CDS |
| GAAATTGGGGCAGATGAATG+GGG | 0.568740 | tig0028819:-15059 | Msa1439550:CDS |
| TCAACAAAACGTTCACAAGC+CGG | 0.570628 | tig0028819:+14797 | None:intergenic |
| ACAAGATCCGGATAAAGCTC+CGG | 0.577304 | tig0028819:+15502 | None:intergenic |
| GATTGAGGTGAAACCGGCGG+TGG | 0.578618 | tig0028819:-15218 | Msa1439550:CDS |
| TTTCCAGGTGGAATCTTGAG+GGG | 0.579676 | tig0028819:-14083 | Msa1439550:intron |
| AAACTAGAAAATTTCCCTAA+CGG | 0.584894 | tig0028819:+12558 | None:intergenic |
| TGCTTGTGCAGAATTTGCAT+CGG | 0.590572 | tig0028819:-15306 | Msa1439550:CDS |
| GAGTTCGGATGAGGAAGAGA+TGG | 0.592926 | tig0028819:-14987 | Msa1439550:CDS |
| TCTTGATGGACCAGAAGAGA+AGG | 0.605271 | tig0028819:-12897 | Msa1439550:CDS |
| ATTGGGGCAGATGAATGGGG+TGG | 0.605769 | tig0028819:-15056 | Msa1439550:CDS |
| GCTTGTGGATTGTAGTGTGT+TGG | 0.607878 | tig0028819:-15332 | Msa1439550:CDS |
| TTTGGATGAGCGGTTGCGGG+TGG | 0.608239 | tig0028819:+15780 | None:intergenic |
| TGAGAATGATGAACCTGCTA+AGG | 0.609377 | tig0028819:-15368 | Msa1439550:CDS |
| AAGAGAGAGATCGATGTCGT+TGG | 0.609485 | tig0028819:+15726 | None:intergenic |
| GTCAGGCATTCACAAATGAG+AGG | 0.612340 | tig0028819:-13159 | Msa1439550:intron |
| AGATTTGAAACCCTAATGAG+AGG | 0.613304 | tig0028819:+15828 | None:intergenic |
| GAGTAAAAGCTGAAACTGAA+CGG | 0.614348 | tig0028819:-13784 | Msa1439550:CDS |
| TTACATGCATTAGGAAAGAG+GGG | 0.617679 | tig0028819:+12769 | None:intergenic |
| CTAATGAGAGGTTTAGTGGG+GGG | 0.618122 | tig0028819:+15840 | None:intergenic |
| TTCAACAAATCAACAATCGA+CGG | 0.618753 | tig0028819:+15463 | None:intergenic |
| GGTGGCGATGTATAAGTCAA+AGG | 0.624239 | tig0028819:-15017 | Msa1439550:CDS |
| GCACAGTAAAGCCTGAGCTG+AGG | 0.624822 | tig0028819:-15902 | None:intergenic |
| CAATCGACGGAACAACATTG+AGG | 0.625918 | tig0028819:+15476 | None:intergenic |
| TGCCGTTGGAGAATAAGGAA+AGG | 0.626114 | tig0028819:-14928 | Msa1439550:CDS |
| TAGTAATAAGCAGTATGCAT+CGG | 0.627164 | tig0028819:-15125 | Msa1439550:CDS |
| AGAAGACGAAGTTGTTGAAG+TGG | 0.628312 | tig0028819:-15180 | Msa1439550:CDS |
| ACTTAGTAAACAGCATGTCA+AGG | 0.628328 | tig0028819:-13106 | Msa1439550:CDS |
| CCCTAATGAGAGGTTTAGTG+GGG | 0.630850 | tig0028819:+15838 | None:intergenic |
| CGGCGAATCAGAAGAAATTG+GGG | 0.632291 | tig0028819:-15072 | Msa1439550:CDS |
| GAGAAAGAAACACTGATATG+TGG | 0.639982 | tig0028819:-12713 | Msa1439550:three_prime_UTR |
| AAAATCAAGTGCCCTTATCG+CGG | 0.652002 | tig0028819:+14838 | None:intergenic |
| GGTGGATGTGATGCTTCAGG+CGG | 0.654680 | tig0028819:-15038 | Msa1439550:CDS |
| AGTTGTTGAAGTGGCTGTTG+GGG | 0.656007 | tig0028819:-15171 | Msa1439550:CDS |
| ATCAAGTGCCCTTATCGCGG+AGG | 0.657323 | tig0028819:+14841 | None:intergenic |
| TGCTGCGGTTTATAATACGC+TGG | 0.663673 | tig0028819:-15257 | Msa1439550:CDS |
| ACAAAACGTTCACAAGCCGG+AGG | 0.666267 | tig0028819:+14800 | None:intergenic |
| TTTGATTGAGGTGAAACCGG+CGG | 0.669349 | tig0028819:-15221 | Msa1439550:CDS |
| CAAAACGTTCACAAGCCGGA+GGG | 0.670414 | tig0028819:+14801 | None:intergenic |
| CCTAATGAGAGGTTTAGTGG+GGG | 0.680119 | tig0028819:+15839 | None:intergenic |
| CAAGAAAGAACGGTACCAGG+AGG | 0.701118 | tig0028819:-14573 | Msa1439550:CDS |
| AAGACAACTCCCTGCCCCTG+GGG | 0.703050 | tig0028819:+12612 | None:intergenic |
| GGATGCGGATGAGAATGCTG+CGG | 0.727804 | tig0028819:-15272 | Msa1439550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTAAAAAAGAAAAAATTA+AGG | + | tig0028819:14258-14277 | None:intergenic | 10.0% |
| !!! | ATATTTTTGTAATTTATAGA+TGG | - | tig0028819:14722-14741 | Msa1439550:intron | 10.0% |
| !! | TTGATTGTTATCTTATAAAT+TGG | - | tig0028819:13729-13748 | Msa1439550:intron | 15.0% |
| !! | TATTACATAACTAATGATAA+GGG | + | tig0028819:13952-13971 | None:intergenic | 15.0% |
| !! | ATATTACATAACTAATGATA+AGG | + | tig0028819:13953-13972 | None:intergenic | 15.0% |
| !! | TTTGCTAAATAAAATAAACA+AGG | + | tig0028819:14697-14716 | None:intergenic | 15.0% |
| !! | CATATTAAAAAAAACATGTT+TGG | - | tig0028819:14912-14931 | Msa1439550:CDS | 15.0% |
| !! | ATAAATTAGTCAGTATAAAA+AGG | + | tig0028819:15065-15084 | None:intergenic | 15.0% |
| !!! | TTTATATATGATTTTTCAGT+TGG | - | tig0028819:15080-15099 | Msa1439550:CDS | 15.0% |
| !!! | AAAGTATTAGTTTATATCTC+GGG | + | tig0028819:14167-14186 | None:intergenic | 20.0% |
| !!! | CAAAGTATTAGTTTATATCT+CGG | + | tig0028819:14168-14187 | None:intergenic | 20.0% |
| !!! | TTTTTTTTAGTAAATACCAG+TGG | - | tig0028819:14985-15004 | Msa1439550:CDS | 20.0% |
| !! | ACCAAAAATTTAATTAAGTC+AGG | + | tig0028819:15207-15226 | None:intergenic | 20.0% |
| !!! | ACTTAATTAAATTTTTGGTC+AGG | - | tig0028819:15208-15227 | Msa1439550:CDS | 20.0% |
| ! | TTTCAAATCTTCAACAACAA+TGG | - | tig0028819:12569-12588 | Msa1439550:three_prime_UTR | 25.0% |
| ! | TATTATGAAGCAGAAGAAAT+TGG | - | tig0028819:13514-13533 | Msa1439550:intron | 25.0% |
| !! | TTCTTGTTCTTTTTACTGAT+GGG | + | tig0028819:13797-13816 | None:intergenic | 25.0% |
| !! | TTTCTTGTTCTTTTTACTGA+TGG | + | tig0028819:13798-13817 | None:intergenic | 25.0% |
| ! | GTAAAAAGAACAAGAAAGAA+CGG | - | tig0028819:13801-13820 | Msa1439550:intron | 25.0% |
| ! | TAACATGTATACTTTACCAT+TGG | - | tig0028819:13983-14002 | Msa1439550:intron | 25.0% |
| !! | AAGTATTAGTTTATATCTCG+GGG | + | tig0028819:14166-14185 | None:intergenic | 25.0% |
| ! | CAATCATGAACACAATATAA+GGG | + | tig0028819:14430-14449 | None:intergenic | 25.0% |
| ! | TTAATACAGAATGGAACAAA+TGG | + | tig0028819:14464-14483 | None:intergenic | 25.0% |
| ! | GTATAGAATCATAAAAGATG+TGG | - | tig0028819:14515-14534 | Msa1439550:intron | 25.0% |
| ! | AAATTTAATTAAGTCAGGCA+AGG | + | tig0028819:15202-15221 | None:intergenic | 25.0% |
| !! | GCCTGACTTAATTAAATTTT+TGG | - | tig0028819:15203-15222 | Msa1439550:CDS | 25.0% |
| !! | TATTTTGTTACTGTTAGTGT+TGG | - | tig0028819:15355-15374 | Msa1439550:CDS | 25.0% |
| ! | TAGGAATATCATGACAATAT+TGG | - | tig0028819:15461-15480 | Msa1439550:CDS | 25.0% |
| ! | AAAGATTCAGAAGTTCTTAA+TGG | - | tig0028819:15523-15542 | Msa1439550:CDS | 25.0% |
| !! | AAACAGATTTTACATGCATT+AGG | + | tig0028819:15627-15646 | None:intergenic | 25.0% |
| ! | TTCGATTTCTGTATTTATAC+TGG | - | tig0028819:15732-15751 | Msa1439550:CDS | 25.0% |
| ! | AAACTAGAAAATTTCCCTAA+CGG | + | tig0028819:15829-15848 | None:intergenic | 25.0% |
| !!! | GGAAATTTTCTAGTTTTGAT+AGG | - | tig0028819:15833-15852 | Msa1439550:five_prime_UTR | 25.0% |
| !!! | GTTGTTTTAACGTCTATAAT+TGG | - | tig0028819:15855-15874 | Msa1439550:five_prime_UTR | 25.0% |
| ! | CTTCGATGTTTTCTTTCAAT+CGG | + | tig0028819:12767-12786 | None:intergenic | 30.0% |
| TTCAACAAATCAACAATCGA+CGG | + | tig0028819:12924-12943 | None:intergenic | 30.0% | |
| GACAATTGAGAATTTGATTG+AGG | - | tig0028819:13151-13170 | Msa1439550:CDS | 30.0% | |
| TAGTAATAAGCAGTATGCAT+CGG | - | tig0028819:13259-13278 | Msa1439550:intron | 30.0% | |
| !! | TGAACGTTTTGTTGATGTTT+TGG | - | tig0028819:13595-13614 | Msa1439550:intron | 30.0% |
| !! | GAACGTTTTGTTGATGTTTT+GGG | - | tig0028819:13596-13615 | Msa1439550:intron | 30.0% |
| ! | CTACAAAATTGGTTTAGAAG+TGG | + | tig0028819:13675-13694 | None:intergenic | 30.0% |
| TCTAGAGAGTTCTACAAAAT+TGG | + | tig0028819:13686-13705 | None:intergenic | 30.0% | |
| TCACTAGTTGCTTCATTATT+TGG | - | tig0028819:13854-13873 | Msa1439550:intron | 30.0% | |
| !! | TTGAGTTTTGACATAGTATG+TGG | - | tig0028819:13900-13919 | Msa1439550:intron | 30.0% |
| GATGATAGAACTGTCTAATA+CGG | - | tig0028819:14103-14122 | Msa1439550:intron | 30.0% | |
| ATGATAGAACTGTCTAATAC+GGG | - | tig0028819:14104-14123 | Msa1439550:intron | 30.0% | |
| GCAATCATGAACACAATATA+AGG | + | tig0028819:14431-14450 | None:intergenic | 30.0% | |
| !! | TGGAACAAATGGATTAAGTT+CGG | + | tig0028819:14453-14472 | None:intergenic | 30.0% |
| TGTTCCATTCTGTATTAATC+TGG | - | tig0028819:14466-14485 | Msa1439550:intron | 30.0% | |
| AGAACCAGATTAATACAGAA+TGG | + | tig0028819:14473-14492 | None:intergenic | 30.0% | |
| !! | GTATTAATCTGGTTCTAAGT+TGG | - | tig0028819:14477-14496 | Msa1439550:intron | 30.0% |
| TTTACTCTATCCGAATATCT+GGG | + | tig0028819:14587-14606 | None:intergenic | 30.0% | |
| ! | TTTTACTCTATCCGAATATC+TGG | + | tig0028819:14588-14607 | None:intergenic | 30.0% |
| ! | TCAAATTGAGTTTGATGACT+TGG | - | tig0028819:14628-14647 | Msa1439550:intron | 30.0% |
| TACAATCGTAAACTAGAATC+TGG | - | tig0028819:14759-14778 | Msa1439550:CDS | 30.0% | |
| ATCTCAACTGCAATTTGAAA+TGG | + | tig0028819:14965-14984 | None:intergenic | 30.0% | |
| !! | ATAAAAAGGTGCTGTAAAAC+TGG | + | tig0028819:15051-15070 | None:intergenic | 30.0% |
| AAAAGATGCAACTACTTACT+CGG | + | tig0028819:15136-15155 | None:intergenic | 30.0% | |
| TGAATTTGAATTTGGGGATT+GGG | + | tig0028819:15411-15430 | None:intergenic | 30.0% | |
| AGCTTCTGAATTTGAATTTG+GGG | + | tig0028819:15417-15436 | None:intergenic | 30.0% | |
| GAGCTTCTGAATTTGAATTT+GGG | + | tig0028819:15418-15437 | None:intergenic | 30.0% | |
| AGAGCTTCTGAATTTGAATT+TGG | + | tig0028819:15419-15438 | None:intergenic | 30.0% | |
| ! | TTCAAATTCAGAAGCTCTAA+CGG | - | tig0028819:15421-15440 | Msa1439550:CDS | 30.0% |
| TCATGATATTCCTAAACCAT+GGG | + | tig0028819:15455-15474 | None:intergenic | 30.0% | |
| ATGGCATTATAACTGTTGTA+AGG | - | tig0028819:15542-15561 | Msa1439550:CDS | 30.0% | |
| CTTAACAGTGTAAACTTCAT+TGG | - | tig0028819:15565-15584 | Msa1439550:CDS | 30.0% | |
| TTTACATGCATTAGGAAAGA+GGG | + | tig0028819:15619-15638 | None:intergenic | 30.0% | |
| ! | TTTTACATGCATTAGGAAAG+AGG | + | tig0028819:15620-15639 | None:intergenic | 30.0% |
| ! | GCATGTAAAATCTGTTTTGT+CGG | - | tig0028819:15630-15649 | Msa1439550:CDS | 30.0% |
| ! | CATGTAAAATCTGTTTTGTC+GGG | - | tig0028819:15631-15650 | Msa1439550:CDS | 30.0% |
| ! | TAATATATCTTCTTTTCCCC+AGG | - | tig0028819:15756-15775 | Msa1439550:CDS | 30.0% |
| ! | AATATATCTTCTTTTCCCCA+GGG | - | tig0028819:15757-15776 | Msa1439550:CDS | 30.0% |
| ! | AGATTTGAAACCCTAATGAG+AGG | + | tig0028819:12559-12578 | None:intergenic | 35.0% |
| !!! | GAACGAGTTTTTTTAGGGTT+CGG | + | tig0028819:12731-12750 | None:intergenic | 35.0% |
| !!! | GGAGAGAACGAGTTTTTTTA+GGG | + | tig0028819:12736-12755 | None:intergenic | 35.0% |
| !!! | AGGAGAGAACGAGTTTTTTT+AGG | + | tig0028819:12737-12756 | None:intergenic | 35.0% |
| ACATTGAGGTTAACAAGATC+CGG | + | tig0028819:12897-12916 | None:intergenic | 35.0% | |
| !! | TGATGTTGTTACGTTGATTC+AGG | - | tig0028819:12968-12987 | Msa1439550:intron | 35.0% |
| GAATTTGATTGAGGTGAAAC+CGG | - | tig0028819:13160-13179 | Msa1439550:intron | 35.0% | |
| ! | GATTTTGTTGCAGAGTAGTA+CGG | - | tig0028819:13292-13311 | Msa1439550:intron | 35.0% |
| AACCTTTCCTTATTCTCCAA+CGG | + | tig0028819:13461-13480 | None:intergenic | 35.0% | |
| ! | ACAGCTTTTGCAGCTTTTAT+GGG | - | tig0028819:13626-13645 | Msa1439550:CDS | 35.0% |
| ! | TTTTGCAGCTTTTATGGGTA+AGG | - | tig0028819:13631-13650 | Msa1439550:CDS | 35.0% |
| TGCTTCATTATTTGGTAAGC+AGG | - | tig0028819:13862-13881 | Msa1439550:intron | 35.0% | |
| ! | GAAATAACTCAAGGTACCAA+TGG | + | tig0028819:14002-14021 | None:intergenic | 35.0% |
| TGATAGAACTGTCTAATACG+GGG | - | tig0028819:14105-14124 | Msa1439550:intron | 35.0% | |
| TGCATATTTCAATTCACGCA+TGG | + | tig0028819:14211-14230 | None:intergenic | 35.0% | |
| TGAGTACTCTATATCTTTCC+AGG | - | tig0028819:14286-14305 | Msa1439550:intron | 35.0% | |
| AATGGAACTATACATCAGGT+AGG | - | tig0028819:14387-14406 | Msa1439550:intron | 35.0% | |
| GAACACAATATAAGGGAAAG+AGG | + | tig0028819:14423-14442 | None:intergenic | 35.0% | |
| GAGTAAAAGCTGAAACTGAA+CGG | - | tig0028819:14600-14619 | Msa1439550:intron | 35.0% | |
| ! | AATTGAGTTTGATGACTTGG+AGG | - | tig0028819:14631-14650 | Msa1439550:intron | 35.0% |
| ATCTGGACTTTATACTCTTC+AGG | - | tig0028819:14776-14795 | Msa1439550:CDS | 35.0% | |
| !!! | CTGTCATTTTGGGTCATATT+TGG | - | tig0028819:15106-15125 | Msa1439550:CDS | 35.0% |
| ACTTAGTAAACAGCATGTCA+AGG | - | tig0028819:15278-15297 | Msa1439550:CDS | 35.0% | |
| CTGAATTTGAATTTGGGGAT+TGG | + | tig0028819:15412-15431 | None:intergenic | 35.0% | |
| !!! | TCTAACGGATTATTTTCCCA+TGG | - | tig0028819:15436-15455 | Msa1439550:CDS | 35.0% |
| ! | GGATTATTTTCCCATGGTTT+AGG | - | tig0028819:15442-15461 | Msa1439550:CDS | 35.0% |
| GTCATGATATTCCTAAACCA+TGG | + | tig0028819:15456-15475 | None:intergenic | 35.0% | |
| TTACATGCATTAGGAAAGAG+GGG | + | tig0028819:15618-15637 | None:intergenic | 35.0% | |
| GAGAAAGAAACACTGATATG+TGG | - | tig0028819:15671-15690 | Msa1439550:CDS | 35.0% | |
| ! | ATATATCTTCTTTTCCCCAG+GGG | - | tig0028819:15758-15777 | Msa1439550:CDS | 35.0% |
| ! | AACGGTCTAAAATTGCTAGA+TGG | + | tig0028819:15811-15830 | None:intergenic | 35.0% |
| ! | TCTAGCAATTTTAGACCGTT+AGG | - | tig0028819:15811-15830 | Msa1439550:exon | 35.0% |
| ! | CTAGCAATTTTAGACCGTTA+GGG | - | tig0028819:15812-15831 | Msa1439550:exon | 35.0% |
| ACCCTAATGAGAGGTTTAGT+GGG | + | tig0028819:12550-12569 | None:intergenic | 40.0% | |
| AACCCTAATGAGAGGTTTAG+TGG | + | tig0028819:12551-12570 | None:intergenic | 40.0% | |
| TGAATTTGCGTTTGGATGAG+CGG | + | tig0028819:12617-12636 | None:intergenic | 40.0% | |
| TAAGCTTGTGAAGCTCTTCA+TGG | + | tig0028819:12845-12864 | None:intergenic | 40.0% | |
| CACAAGCTTAAAGTTCTTGC+TGG | - | tig0028819:12855-12874 | Msa1439550:CDS | 40.0% | |
| TGAGAATGATGAACCTGCTA+AGG | - | tig0028819:13016-13035 | Msa1439550:intron | 40.0% | |
| TGCTTGTGCAGAATTTGCAT+CGG | - | tig0028819:13078-13097 | Msa1439550:intron | 40.0% | |
| AGAAGACGAAGTTGTTGAAG+TGG | - | tig0028819:13204-13223 | Msa1439550:intron | 40.0% | |
| AAGTTGTTGAAGTGGCTGTT+GGG | - | tig0028819:13212-13231 | Msa1439550:intron | 40.0% | |
| TGTTGGGGAAGATTAAGGTT+AGG | - | tig0028819:13228-13247 | Msa1439550:intron | 40.0% | |
| GTTGGGGAAGATTAAGGTTA+GGG | - | tig0028819:13229-13248 | Msa1439550:intron | 40.0% | |
| TACGGCGAATCAGAAGAAAT+TGG | - | tig0028819:13310-13329 | Msa1439550:intron | 40.0% | |
| ACGGCGAATCAGAAGAAATT+GGG | - | tig0028819:13311-13330 | Msa1439550:intron | 40.0% | |
| AAGAAATTGGGGCAGATGAA+TGG | - | tig0028819:13323-13342 | Msa1439550:intron | 40.0% | |
| AGAAATTGGGGCAGATGAAT+GGG | - | tig0028819:13324-13343 | Msa1439550:intron | 40.0% | |
| ! | ATGTTGTTTGTTGATGCCGT+TGG | - | tig0028819:13442-13461 | Msa1439550:intron | 40.0% |
| GAAAGGTTTGTGAAAGCAGA+AGG | - | tig0028819:13473-13492 | Msa1439550:intron | 40.0% | |
| AAAATCAAGTGCCCTTATCG+CGG | + | tig0028819:13549-13568 | None:intergenic | 40.0% | |
| TCAACAAAACGTTCACAAGC+CGG | + | tig0028819:13590-13609 | None:intergenic | 40.0% | |
| ! | GACAGCTTTTGCAGCTTTTA+TGG | - | tig0028819:13625-13644 | Msa1439550:CDS | 40.0% |
| TGACATAGTATGTGGACAGA+CGG | - | tig0028819:13908-13927 | Msa1439550:intron | 40.0% | |
| ! | TACCTTGAGTTATTTCGCGA+AGG | - | tig0028819:14006-14025 | Msa1439550:CDS | 40.0% |
| !! | CGAAGGAGAGATTAACTTGT+TGG | - | tig0028819:14023-14042 | Msa1439550:CDS | 40.0% |
| GTACTCTATATCTTTCCAGG+TGG | - | tig0028819:14289-14308 | Msa1439550:intron | 40.0% | |
| ATGAGTGCGAGAAGATAGAT+AGG | - | tig0028819:14362-14381 | Msa1439550:intron | 40.0% | |
| CGAGAAGATAGATAGGCTAA+TGG | - | tig0028819:14369-14388 | Msa1439550:intron | 40.0% | |
| GGCTAATGGAACTATACATC+AGG | - | tig0028819:14383-14402 | Msa1439550:intron | 40.0% | |
| ! | CTTTTTCCCTCCCAGATATT+CGG | - | tig0028819:14574-14593 | Msa1439550:CDS | 40.0% |
| AAAAGCTGAAACTGAACGGT+TGG | - | tig0028819:14604-14623 | Msa1439550:intron | 40.0% | |
| ACTACTACCAAGCCATTACT+TGG | + | tig0028819:14829-14848 | None:intergenic | 40.0% | |
| TCCATGACTGCTTCAAAACA+TGG | - | tig0028819:14875-14894 | Msa1439550:CDS | 40.0% | |
| CCATGACTGCTTCAAAACAT+GGG | - | tig0028819:14876-14895 | Msa1439550:CDS | 40.0% | |
| CATGACTGCTTCAAAACATG+GGG | - | tig0028819:14877-14896 | Msa1439550:CDS | 40.0% | |
| TTATAAGCAGTAAGCACCAC+TGG | + | tig0028819:15004-15023 | None:intergenic | 40.0% | |
| AAACTGGCATCTCATTCAGA+AGG | + | tig0028819:15035-15054 | None:intergenic | 40.0% | |
| !! | TCAGTTGGTTGCTGTCATTT+TGG | - | tig0028819:15095-15114 | Msa1439550:CDS | 40.0% |
| !!! | CAGTTGGTTGCTGTCATTTT+GGG | - | tig0028819:15096-15115 | Msa1439550:CDS | 40.0% |
| GCATGTCAAGGATATACTTC+AGG | - | tig0028819:15290-15309 | Msa1439550:CDS | 40.0% | |
| CTTCAGGTATATATCCTCTG+CGG | - | tig0028819:15306-15325 | Msa1439550:CDS | 40.0% | |
| TTATTCAATCATAGCCGCAG+AGG | + | tig0028819:15323-15342 | None:intergenic | 40.0% | |
| GACAATATTGGCGATCTTGA+TGG | - | tig0028819:15473-15492 | Msa1439550:CDS | 40.0% | |
| CTAATGAGAGGTTTAGTGGG+GGG | + | tig0028819:12547-12566 | None:intergenic | 45.0% | |
| CCTAATGAGAGGTTTAGTGG+GGG | + | tig0028819:12548-12567 | None:intergenic | 45.0% | |
| CCCTAATGAGAGGTTTAGTG+GGG | + | tig0028819:12549-12568 | None:intergenic | 45.0% | |
| CCCCACTAAACCTCTCATTA+GGG | - | tig0028819:12546-12565 | Msa1439550:three_prime_UTR | 45.0% | |
| !! | GGTGTCGTTGAATTTGCGTT+TGG | + | tig0028819:12625-12644 | None:intergenic | 45.0% |
| AAGAGAGAGATCGATGTCGT+TGG | + | tig0028819:12661-12680 | None:intergenic | 45.0% | |
| !!! | TTTTAGGGTTCGGTTGTCGA+CGG | + | tig0028819:12721-12740 | None:intergenic | 45.0% |
| TTCTTTCAATCGGCGTTCGA+AGG | + | tig0028819:12757-12776 | None:intergenic | 45.0% | |
| TAATCAACCCGAACGATTCG+CGG | - | tig0028819:12803-12822 | Msa1439550:three_prime_UTR | 45.0% | |
| CTCTTCATGGAGCTCCAATT+CGG | + | tig0028819:12832-12851 | None:intergenic | 45.0% | |
| TAAAGTTCTTGCTGGAGCAC+CGG | - | tig0028819:12863-12882 | Msa1439550:CDS | 45.0% | |
| ACAAGATCCGGATAAAGCTC+CGG | + | tig0028819:12885-12904 | None:intergenic | 45.0% | |
| CAATCGACGGAACAACATTG+AGG | + | tig0028819:12911-12930 | None:intergenic | 45.0% | |
| GCATCAACAAGAACCTTAGC+AGG | + | tig0028819:13032-13051 | None:intergenic | 45.0% | |
| ! | GCTTGTGGATTGTAGTGTGT+TGG | - | tig0028819:13052-13071 | Msa1439550:intron | 45.0% |
| !! | GCAGAATTTGCATCGGTTGT+CGG | - | tig0028819:13085-13104 | Msa1439550:intron | 45.0% |
| TGCTGCGGTTTATAATACGC+TGG | - | tig0028819:13127-13146 | Msa1439550:CDS | 45.0% | |
| TTTGATTGAGGTGAAACCGG+CGG | - | tig0028819:13163-13182 | Msa1439550:intron | 45.0% | |
| GAAGTTGTTGAAGTGGCTGT+TGG | - | tig0028819:13211-13230 | Msa1439550:intron | 45.0% | |
| AGTTGTTGAAGTGGCTGTTG+GGG | - | tig0028819:13213-13232 | Msa1439550:intron | 45.0% | |
| ! | GCAGTATGCATCGGAGATTT+TGG | - | tig0028819:13268-13287 | Msa1439550:intron | 45.0% |
| CGGCGAATCAGAAGAAATTG+GGG | - | tig0028819:13312-13331 | Msa1439550:intron | 45.0% | |
| GAAATTGGGGCAGATGAATG+GGG | - | tig0028819:13325-13344 | Msa1439550:intron | 45.0% | |
| GGTGGCGATGTATAAGTCAA+AGG | - | tig0028819:13367-13386 | Msa1439550:intron | 45.0% | |
| GTCAAAGGATCCCAAGAGTT+CGG | - | tig0028819:13382-13401 | Msa1439550:intron | 45.0% | |
| TCTTCCTCATCCGAACTCTT+GGG | + | tig0028819:13395-13414 | None:intergenic | 45.0% | |
| GTTGATGCCGTTGGAGAATA+AGG | - | tig0028819:13451-13470 | Msa1439550:intron | 45.0% | |
| TGCCGTTGGAGAATAAGGAA+AGG | - | tig0028819:13456-13475 | Msa1439550:intron | 45.0% | |
| TGCGATGACAAATTACCCTC+CGG | - | tig0028819:13568-13587 | Msa1439550:intron | 45.0% | |
| GAACAAGAAAGAACGGTACC+AGG | - | tig0028819:13808-13827 | Msa1439550:intron | 45.0% | |
| CTCCTTCGCGAAATAACTCA+AGG | + | tig0028819:14011-14030 | None:intergenic | 45.0% | |
| AGAACTGTCTAATACGGGGA+TGG | - | tig0028819:14109-14128 | Msa1439550:intron | 45.0% | |
| ATATCTCGGGGACAGTTCAA+GGG | + | tig0028819:14154-14173 | None:intergenic | 45.0% | |
| TATATCTCGGGGACAGTTCA+AGG | + | tig0028819:14155-14174 | None:intergenic | 45.0% | |
| TCTTTCCAGGTGGAATCTTG+AGG | - | tig0028819:14299-14318 | Msa1439550:intron | 45.0% | |
| CTTTCCAGGTGGAATCTTGA+GGG | - | tig0028819:14300-14319 | Msa1439550:intron | 45.0% | |
| TTTCCAGGTGGAATCTTGAG+GGG | - | tig0028819:14301-14320 | Msa1439550:intron | 45.0% | |
| CTCTATCCGAATATCTGGGA+GGG | + | tig0028819:14583-14602 | None:intergenic | 45.0% | |
| ACTCTATCCGAATATCTGGG+AGG | + | tig0028819:14584-14603 | None:intergenic | 45.0% | |
| GACCAACTGATGCCAAGTAA+TGG | - | tig0028819:14814-14833 | Msa1439550:CDS | 45.0% | |
| AGCCATTACTTGGCATCAGT+TGG | + | tig0028819:14819-14838 | None:intergenic | 45.0% | |
| ACTGATGCCAAGTAATGGCT+TGG | - | tig0028819:14819-14838 | Msa1439550:CDS | 45.0% | |
| !!! | CCCATGTTTTGAAGCAGTCA+TGG | + | tig0028819:14879-14898 | None:intergenic | 45.0% |
| GTCAGGCATTCACAAATGAG+AGG | - | tig0028819:15225-15244 | Msa1439550:CDS | 45.0% | |
| ! | TCTTGATGGACCAGAAGAGA+AGG | - | tig0028819:15487-15506 | Msa1439550:CDS | 45.0% |
| TAAAGCCTGAGCTGAGGTAG+TGG | - | tig0028819:12488-12507 | Msa1439550:three_prime_UTR | 50.0% | |
| CCCCCACTAAACCTCTCATT+AGG | - | tig0028819:12545-12564 | Msa1439550:three_prime_UTR | 50.0% | |
| ! | GTCGTTGGTGGAGGATGAAA+CGG | + | tig0028819:12646-12665 | None:intergenic | 50.0% |
| AGAGAGATCGATGTCGTTGG+TGG | + | tig0028819:12658-12677 | None:intergenic | 50.0% | |
| !! | GCGAATCGTTCGGGTTGATT+AGG | + | tig0028819:12804-12823 | None:intergenic | 50.0% |
| TTCGGAATCCGCGAATCGTT+CGG | + | tig0028819:12814-12833 | None:intergenic | 50.0% | |
| ACGATTCGCGGATTCCGAAT+TGG | - | tig0028819:12815-12834 | Msa1439550:three_prime_UTR | 50.0% | |
| GGTTCTTGTTGATGCGCTTG+TGG | - | tig0028819:13037-13056 | Msa1439550:intron | 50.0% | |
| !! | TTTGCATCGGTTGTCGGAGA+AGG | - | tig0028819:13091-13110 | Msa1439550:intron | 50.0% |
| GTGGCTGTTGGGGAAGATTA+AGG | - | tig0028819:13223-13242 | Msa1439550:intron | 50.0% | |
| CTCTTCCTCATCCGAACTCT+TGG | + | tig0028819:13396-13415 | None:intergenic | 50.0% | |
| GAGTTCGGATGAGGAAGAGA+TGG | - | tig0028819:13397-13416 | Msa1439550:intron | 50.0% | |
| TTCGGATGAGGAAGAGATGG+TGG | - | tig0028819:13400-13419 | Msa1439550:intron | 50.0% | |
| CAAAACGTTCACAAGCCGGA+GGG | + | tig0028819:13586-13605 | None:intergenic | 50.0% | |
| ACAAAACGTTCACAAGCCGG+AGG | + | tig0028819:13587-13606 | None:intergenic | 50.0% | |
| CAAGAAAGAACGGTACCAGG+AGG | - | tig0028819:13811-13830 | Msa1439550:intron | 50.0% | |
| TATCTCGGGGACAGTTCAAG+GGG | + | tig0028819:14153-14172 | None:intergenic | 50.0% | |
| CTGGCATCTCATTCAGAAGG+CGG | + | tig0028819:15032-15051 | None:intergenic | 50.0% | |
| ! | TGTTTTGTCGGGAGAACGAG+AGG | - | tig0028819:15642-15661 | Msa1439550:CDS | 50.0% |
| TTCTGCCACTACCTCAGCTC+AGG | + | tig0028819:12496-12515 | None:intergenic | 55.0% | |
| GAGAGGTTTAGTGGGGGGTT+TGG | + | tig0028819:12542-12561 | None:intergenic | 55.0% | |
| TGCGTTTGGATGAGCGGTTG+CGG | + | tig0028819:12611-12630 | None:intergenic | 55.0% | |
| ! | GAGATCGATGTCGTTGGTGG+AGG | + | tig0028819:12655-12674 | None:intergenic | 55.0% |
| !! | TTGTCGACGGCGTCGATTGT+GGG | + | tig0028819:12708-12727 | None:intergenic | 55.0% |
| TCGGAATCCGCGAATCGTTC+GGG | + | tig0028819:12813-12832 | None:intergenic | 55.0% | |
| !! | TGGAGCACCGGAGCTTTATC+CGG | - | tig0028819:12875-12894 | Msa1439550:CDS | 55.0% |
| TCGGTTGTCGGAGAAGGATG+CGG | - | tig0028819:13097-13116 | Msa1439550:CDS | 55.0% | |
| GGATGCGGATGAGAATGCTG+CGG | - | tig0028819:13112-13131 | Msa1439550:CDS | 55.0% | |
| ATTGGGGCAGATGAATGGGG+TGG | - | tig0028819:13328-13347 | Msa1439550:intron | 55.0% | |
| TGGGGTGGATGTGATGCTTC+AGG | - | tig0028819:13343-13362 | Msa1439550:intron | 55.0% | |
| GGTGGATGTGATGCTTCAGG+CGG | - | tig0028819:13346-13365 | Msa1439550:intron | 55.0% | |
| GGATCCCAAGAGTTCGGATG+AGG | - | tig0028819:13388-13407 | Msa1439550:intron | 55.0% | |
| ATCAAGTGCCCTTATCGCGG+AGG | + | tig0028819:13546-13565 | None:intergenic | 55.0% | |
| ACGGTACCAGGAGGAGTTAG+AGG | - | tig0028819:13820-13839 | Msa1439550:intron | 55.0% | |
| TTCGCTCCTCTAACTCCTCC+TGG | + | tig0028819:13829-13848 | None:intergenic | 55.0% | |
| ATCTCGGGGACAGTTCAAGG+GGG | + | tig0028819:14152-14171 | None:intergenic | 55.0% | |
| GTGGAATCTTGAGGGGCTCT+AGG | - | tig0028819:14308-14327 | Msa1439550:intron | 55.0% | |
| TGTGCTCGCTCCTTCTCTTC+TGG | + | tig0028819:15500-15519 | None:intergenic | 55.0% | |
| ! | ATCTTCTTTTCCCCAGGGGC+AGG | - | tig0028819:15762-15781 | Msa1439550:CDS | 55.0% |
| ! | TCTTCTTTTCCCCAGGGGCA+GGG | - | tig0028819:15763-15782 | Msa1439550:CDS | 55.0% |
| TTTGGATGAGCGGTTGCGGG+TGG | + | tig0028819:12607-12626 | None:intergenic | 60.0% | |
| GCGTTTGGATGAGCGGTTGC+GGG | + | tig0028819:12610-12629 | None:intergenic | 60.0% | |
| !! | GACGGCGTCGATTGTGGGTT+GGG | + | tig0028819:12703-12722 | None:intergenic | 60.0% |
| !! | GTTGTCGACGGCGTCGATTG+TGG | + | tig0028819:12709-12728 | None:intergenic | 60.0% |
| GATTGAGGTGAAACCGGCGG+TGG | - | tig0028819:13166-13185 | Msa1439550:intron | 60.0% | |
| GGATGTGATGCTTCAGGCGG+TGG | - | tig0028819:13349-13368 | Msa1439550:intron | 60.0% | |
| TGGCGTATGCCTCCGCGATA+AGG | - | tig0028819:13534-13553 | Msa1439550:intron | 60.0% | |
| GGCGTATGCCTCCGCGATAA+GGG | - | tig0028819:13535-13554 | Msa1439550:intron | 60.0% | |
| TCTCGGGGACAGTTCAAGGG+GGG | + | tig0028819:14151-14170 | None:intergenic | 60.0% | |
| GAGCCCCTCAAGATTCCACC+TGG | + | tig0028819:14307-14326 | None:intergenic | 60.0% | |
| AAGACAACTCCCTGCCCCTG+GGG | + | tig0028819:15775-15794 | None:intergenic | 60.0% | |
| CAAGACAACTCCCTGCCCCT+GGG | + | tig0028819:15776-15795 | None:intergenic | 60.0% | |
| TCAAGACAACTCCCTGCCCC+TGG | + | tig0028819:15777-15796 | None:intergenic | 60.0% | |
| !! | CGACGGCGTCGATTGTGGGT+TGG | + | tig0028819:12704-12723 | None:intergenic | 65.0% |
| TGAGGTGAAACCGGCGGTGG+CGG | - | tig0028819:13169-13188 | Msa1439550:intron | 65.0% | |
| CAGACAATCTCCGCCACCGC+CGG | + | tig0028819:13182-13201 | None:intergenic | 65.0% | |
| !! | CGGTTGCGGGTGGTGGTGGA+TGG | + | tig0028819:12597-12616 | None:intergenic | 70.0% |
| ! | TGAGCGGTTGCGGGTGGTGG+TGG | + | tig0028819:12601-12620 | None:intergenic | 70.0% |
| GGATGAGCGGTTGCGGGTGG+TGG | + | tig0028819:12604-12623 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0028819 | gene | 12487 | 15919 | 12487 | ID=Msa1439550;Name=Msa1439550 |
| tig0028819 | mRNA | 12487 | 15919 | 12487 | ID=Msa1439550-mRNA-1;Parent=Msa1439550;Name=Msa1439550-mRNA-1;_AED=0.09;_eAED=0.09;_QI=101|1|1|1|1|1|8|366|525 |
| tig0028819 | exon | 12487 | 12942 | 12487 | ID=Msa1439550-mRNA-1:exon:11835;Parent=Msa1439550-mRNA-1 |
| tig0028819 | exon | 13095 | 13176 | 13095 | ID=Msa1439550-mRNA-1:exon:11834;Parent=Msa1439550-mRNA-1 |
| tig0028819 | exon | 13270 | 13307 | 13270 | ID=Msa1439550-mRNA-1:exon:11833;Parent=Msa1439550-mRNA-1 |
| tig0028819 | exon | 13609 | 13665 | 13609 | ID=Msa1439550-mRNA-1:exon:11832;Parent=Msa1439550-mRNA-1 |
| tig0028819 | exon | 13754 | 13817 | 13754 | ID=Msa1439550-mRNA-1:exon:11831;Parent=Msa1439550-mRNA-1 |
| tig0028819 | exon | 14002 | 14098 | 14002 | ID=Msa1439550-mRNA-1:exon:11830;Parent=Msa1439550-mRNA-1 |
| tig0028819 | exon | 14531 | 14615 | 14531 | ID=Msa1439550-mRNA-1:exon:11829;Parent=Msa1439550-mRNA-1 |
| tig0028819 | exon | 14754 | 15919 | 14754 | ID=Msa1439550-mRNA-1:exon:11828;Parent=Msa1439550-mRNA-1 |
| tig0028819 | five_prime_UTR | 15819 | 15919 | 15819 | ID=Msa1439550-mRNA-1:five_prime_utr;Parent=Msa1439550-mRNA-1 |
| tig0028819 | CDS | 14754 | 15818 | 14754 | ID=Msa1439550-mRNA-1:cds;Parent=Msa1439550-mRNA-1 |
| tig0028819 | CDS | 14531 | 14615 | 14531 | ID=Msa1439550-mRNA-1:cds;Parent=Msa1439550-mRNA-1 |
| tig0028819 | CDS | 14002 | 14098 | 14002 | ID=Msa1439550-mRNA-1:cds;Parent=Msa1439550-mRNA-1 |
| tig0028819 | CDS | 13754 | 13817 | 13754 | ID=Msa1439550-mRNA-1:cds;Parent=Msa1439550-mRNA-1 |
| tig0028819 | CDS | 13609 | 13665 | 13609 | ID=Msa1439550-mRNA-1:cds;Parent=Msa1439550-mRNA-1 |
| tig0028819 | CDS | 13270 | 13307 | 13270 | ID=Msa1439550-mRNA-1:cds;Parent=Msa1439550-mRNA-1 |
| tig0028819 | CDS | 13095 | 13176 | 13095 | ID=Msa1439550-mRNA-1:cds;Parent=Msa1439550-mRNA-1 |
| tig0028819 | CDS | 12853 | 12942 | 12853 | ID=Msa1439550-mRNA-1:cds;Parent=Msa1439550-mRNA-1 |
| tig0028819 | three_prime_UTR | 12487 | 12852 | 12487 | ID=Msa1439550-mRNA-1:three_prime_utr;Parent=Msa1439550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
