AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0261970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0261970 MtrunA17_Chr2g0324291 95.890 146 4 1 1 146 1 144 1.49e-98 285
Msa0261970 MtrunA17_Chr2g0324291 70.103 97 19 2 162 248 22 118 5.36e-42 140
Msa0261970 MtrunA17_Chr2g0324281 95.918 98 3 1 153 250 2 98 1.64e-63 197
Msa0261970 MtrunA17_Chr2g0324281 60.465 129 31 4 17 135 3 121 4.33e-43 145
Msa0261970 MtrunA17_Chr4g0021321 53.285 137 58 2 22 152 34 170 3.16e-45 152
Msa0261970 MtrunA17_Chr4g0021321 58.333 120 35 3 145 249 18 137 3.10e-39 136
Msa0261970 MtrunA17_Chr2g0324261 64.545 110 29 2 29 128 37 146 2.48e-43 147
Msa0261970 MtrunA17_Chr2g0324261 63.478 115 26 4 149 250 21 132 8.11e-38 132
Msa0261970 MtrunA17_Chr2g0282171 46.715 137 63 4 2 133 1 132 5.21e-32 117
Msa0261970 MtrunA17_Chr2g0282171 57.778 90 25 2 167 243 24 113 7.35e-28 106
Msa0261970 MtrunA17_Chr8g0360011 59.551 89 34 1 29 115 32 120 7.39e-31 114
Msa0261970 MtrunA17_Chr8g0360011 58.140 86 24 2 170 243 35 120 7.69e-28 107
Msa0261970 MtrunA17_Chr4g0047371 40.260 154 83 5 6 152 7 158 4.00e-30 111
Msa0261970 MtrunA17_Chr4g0047371 51.685 89 28 2 170 243 32 120 4.41e-26 100
Msa0261970 MtrunA17_Chr1g0154561 52.381 84 35 1 167 245 29 112 4.02e-28 107
Msa0261970 MtrunA17_Chr1g0154561 48.352 91 42 2 29 119 29 114 2.49e-26 102
Msa0261970 MtrunA17_Chr4g0047381 45.690 116 55 3 6 115 7 120 7.21e-28 106
Msa0261970 MtrunA17_Chr4g0047381 50.000 102 35 2 158 243 19 120 2.51e-26 102
Msa0261970 MtrunA17_Chr5g0403521 48.889 90 41 2 30 119 33 117 2.50e-27 105
Msa0261970 MtrunA17_Chr5g0403521 54.321 81 32 1 170 245 35 115 3.19e-27 105
Msa0261970 MtrunA17_Chr1g0175871 36.975 119 62 4 5 115 30 143 2.02e-22 91.3
Msa0261970 MtrunA17_Chr1g0175871 38.333 120 53 4 145 243 24 143 3.43e-21 87.8
Msa0261970 MtrunA17_Chr7g0258821 46.753 77 38 1 170 243 170 246 9.43e-22 93.6
Msa0261970 MtrunA17_Chr7g0258821 43.820 89 41 3 32 119 170 250 4.35e-21 91.7
Msa0261970 MtrunA17_Chr1g0175641 34.677 124 69 3 126 243 38 155 1.17e-21 89.0
Msa0261970 MtrunA17_Chr1g0175641 42.857 84 44 2 32 115 76 155 4.05e-20 84.7
Msa0261970 MtrunA17_Chr1g0175571 41.000 100 49 3 32 128 122 214 2.54e-21 89.0
Msa0261970 MtrunA17_Chr1g0175571 45.000 80 38 2 170 243 122 201 6.94e-20 85.1
Msa0261970 MtrunA17_Chr2g0308681 38.889 90 51 1 30 119 105 190 1.26e-18 82.0
Msa0261970 MtrunA17_Chr2g0308681 37.895 95 53 1 158 246 95 189 2.49e-18 81.3
Msa0261970 MtrunA17_Chr1g0150921 44.068 59 26 1 33 91 365 416 5.34e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0261970 AT4G03510.3 54.545 99 36 2 24 118 38 131 1.03e-31 117
Msa0261970 AT4G03510.3 56.383 94 32 2 162 246 38 131 3.51e-30 113
Msa0261970 AT4G03510.1 54.545 99 36 2 24 118 38 131 1.03e-31 117
Msa0261970 AT4G03510.1 56.383 94 32 2 162 246 38 131 3.51e-30 113
Msa0261970 AT4G03510.2 54.545 99 36 2 24 118 38 131 1.03e-31 117
Msa0261970 AT4G03510.2 56.383 94 32 2 162 246 38 131 3.51e-30 113
Msa0261970 AT4G03510.4 54.545 99 36 2 24 118 38 131 1.03e-31 117
Msa0261970 AT4G03510.4 56.383 94 32 2 162 246 38 131 3.51e-30 113
Msa0261970 AT4G28270.1 48.718 117 42 5 30 137 17 124 1.50e-30 112
Msa0261970 AT4G28270.1 56.667 90 25 3 170 246 19 107 3.98e-27 103
Msa0261970 AT1G19310.1 53.125 96 30 2 165 245 6 101 1.31e-28 108
Msa0261970 AT1G19310.1 51.136 88 38 2 32 119 21 103 2.18e-25 100
Msa0261970 AT1G74990.1 56.098 82 31 1 167 243 14 95 3.96e-28 104
Msa0261970 AT1G74990.1 46.667 105 47 3 29 133 14 109 1.54e-27 103
Msa0261970 AT4G27470.1 37.079 178 94 7 32 202 42 208 1.96e-26 103
Msa0261970 AT4G27470.1 45.283 106 50 2 137 234 8 113 2.54e-24 97.8
Msa0261970 AT2G23780.3 46.465 99 47 3 21 119 16 108 3.48e-26 102
Msa0261970 AT2G23780.3 51.852 81 34 1 170 245 26 106 4.20e-26 102
Msa0261970 AT2G23780.2 46.465 99 47 3 21 119 16 108 3.48e-26 102
Msa0261970 AT2G23780.2 51.852 81 34 1 170 245 26 106 4.20e-26 102
Msa0261970 AT2G23780.1 46.465 99 47 3 21 119 16 108 3.48e-26 102
Msa0261970 AT2G23780.1 51.852 81 34 1 170 245 26 106 4.20e-26 102
Msa0261970 AT3G58030.4 45.745 94 47 2 153 243 120 212 4.50e-22 94.7
Msa0261970 AT3G58030.4 42.991 107 48 4 13 119 123 216 1.16e-20 90.5
Msa0261970 AT3G58030.2 45.745 94 47 2 153 243 120 212 4.50e-22 94.7
Msa0261970 AT3G58030.2 42.991 107 48 4 13 119 123 216 1.16e-20 90.5
Msa0261970 AT3G58030.1 45.745 94 47 2 153 243 120 212 4.50e-22 94.7
Msa0261970 AT3G58030.1 42.991 107 48 4 13 119 123 216 1.16e-20 90.5
Msa0261970 AT3G58030.3 45.745 94 47 2 153 243 120 212 4.50e-22 94.7
Msa0261970 AT3G58030.3 42.991 107 48 4 13 119 123 216 1.16e-20 90.5
Msa0261970 AT2G42030.1 51.220 82 36 2 165 243 134 214 1.41e-20 90.1
Msa0261970 AT2G42030.1 46.067 89 40 2 32 120 139 219 2.27e-20 89.7
Msa0261970 AT2G44410.1 44.048 84 33 3 170 243 123 202 1.94e-18 84.0
Msa0261970 AT2G44410.1 36.957 92 46 2 32 119 123 206 1.20e-16 79.0

Find 80 sgRNAs with CRISPR-Local

Find 501 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAATCATAATTGTATAAT+TGG 0.103009 2_2:+60651942 None:intergenic
ATGCATTCTGCTGCCAATTA+AGG 0.210654 2_2:-60651868 Msa0261970:five_prime_UTR
GAAATTTCTGATTTGCATAT+TGG 0.222866 2_2:+60650556 None:intergenic
GACCACTTGGTCCTTCTTCA+TGG 0.262295 2_2:-60643821 Msa0261970:CDS
GATTTGCATATTGGACATTC+TGG 0.274453 2_2:+60650565 None:intergenic
GAAATTTCTAATTTGCATAC+TGG 0.298115 2_2:+60643918 None:intergenic
GCTTCTGCTTGTTCTAGTTC+AGG 0.300850 2_2:+60650397 None:intergenic
TCAACACTTGTTCCACTATA+TGG 0.312394 2_2:-60650529 Msa0261970:CDS
ACAACTTCTGTTGGAACCTT+TGG 0.333163 2_2:+60644070 None:intergenic
TTTGTGGTCATCTTTATTGT+TGG 0.347245 2_2:-60643989 Msa0261970:CDS
CTTGGTCCTTCTTCATGGTT+GGG 0.358525 2_2:-60643816 None:intergenic
AAAATCATAATTGTATAATT+GGG 0.361963 2_2:+60651943 None:intergenic
GCACCATATGCTAGTGCTAA+TGG 0.364544 2_2:-60650788 Msa0261970:exon
AGCAGAAGCACCACCAGCAC+AGG 0.376264 2_2:-60650371 Msa0261970:CDS
AAGAGGTAACTTGGACATAA+AGG 0.400504 2_2:-60651582 Msa0261970:five_prime_UTR
TTTGTGGTCATCTCTATTGT+TGG 0.402478 2_2:-60650639 Msa0261970:CDS
ACTTGGTCCTTCTTCATGGT+TGG 0.409561 2_2:-60643817 None:intergenic
ATTCAACCATTTGTAAATGC+AGG 0.410491 2_2:+60643965 None:intergenic
TAATGGACATTCTGTCGAAC+CGG 0.412747 2_2:-60650771 Msa0261970:CDS
TTCCAACACAAGAGGTAACT+TGG 0.424249 2_2:-60651591 Msa0261970:five_prime_UTR
GTTGGCCTTGTATTTACAAA+TGG 0.435974 2_2:-60650621 Msa0261970:CDS
TCAACTCTTGTTCCACTGTA+TGG 0.446790 2_2:-60643891 Msa0261970:CDS
AAATTTCTAATTTGCATACT+GGG 0.451104 2_2:+60643919 None:intergenic
GAAGAAGGACCAAGTGGTCT+AGG 0.454906 2_2:+60643825 None:intergenic
TAATTGTATAATTGGGGTGG+GGG 0.463627 2_2:+60651950 None:intergenic
GATCCGGTGGTAACTCTTTG+TGG 0.463998 2_2:-60644005 Msa0261970:CDS
GTTGCAGTATCAAGTGATCT+TGG 0.469495 2_2:+60650430 None:intergenic
GATCCAGTGGTAACACTTTG+TGG 0.471364 2_2:-60650655 Msa0261970:CDS
GAAAGTTAGTTGTGTGATGA+AGG 0.480952 2_2:+60651818 None:intergenic
GATCTTGGACCAAGTGGTCT+TGG 0.481662 2_2:+60650445 None:intergenic
AAGTGATGGTGATGATGTGC+AGG 0.486214 2_2:+60651792 None:intergenic
GTCCAAGTTACCTCTTGTGT+TGG 0.487804 2_2:+60651589 None:intergenic
GCCACTAGAACAACTTCTGT+TGG 0.492004 2_2:+60644061 None:intergenic
GTTTCACCACGACCATATAG+TGG 0.492063 2_2:+60650517 None:intergenic
GTTGGCCCTGCATTTACAAA+TGG 0.501144 2_2:-60643971 Msa0261970:CDS
AAAACAACATCAACTTCTAA+AGG 0.501531 2_2:-60643861 Msa0261970:CDS
CCTAGAGAATGTGCAAGATC+CGG 0.502900 2_2:-60644021 Msa0261970:CDS
CATAATTGTATAATTGGGGT+GGG 0.507870 2_2:+60651948 None:intergenic
GAAGGTGAGGCTCATCAAGA+TGG 0.515188 2_2:-60650481 Msa0261970:CDS
CCGGATCTTGCACATTCTCT+AGG 0.515488 2_2:+60644021 None:intergenic
AATGGACATTCTGTCGAACC+GGG 0.527440 2_2:-60650770 Msa0261970:CDS
TGTCCATTAGCACTAGCATA+TGG 0.529146 2_2:+60650785 None:intergenic
TTAATCCATTTGTAAATACA+AGG 0.530718 2_2:+60650616 None:intergenic
TCATAATTGTATAATTGGGG+TGG 0.541461 2_2:+60651947 None:intergenic
CTTGGACCAAGTGGTCTTGG+TGG 0.541843 2_2:+60650448 None:intergenic
AACCGTAGTGCTAGTGCCAA+AGG 0.546546 2_2:-60644086 Msa0261970:CDS
CTCACCTTCAGAACTTGATG+TGG 0.546869 2_2:+60650495 None:intergenic
AATGGATTAATAGCACCTCA+TGG 0.547502 2_2:-60650603 Msa0261970:CDS
ATAATTGTATAATTGGGGTG+GGG 0.549988 2_2:+60651949 None:intergenic
TCCAACAGAAGTTGTTCTAG+TGG 0.551420 2_2:-60644062 Msa0261970:CDS
AACTTACCCAACCATGAAGA+AGG 0.552111 2_2:+60643810 None:intergenic
TTCAACCATTTGTAAATGCA+GGG 0.555191 2_2:+60643966 None:intergenic
CATTAGCATCAGCTTTGCCC+CGG 0.566386 2_2:+60650752 None:intergenic
TGCAAACTACTCTCCTGTGC+TGG 0.567244 2_2:+60650358 None:intergenic
AAGGTGAGGCTCATCAAGAT+GGG 0.576426 2_2:-60650480 Msa0261970:CDS
AACCTTTGGCACTAGCACTA+CGG 0.576753 2_2:+60644084 None:intergenic
CACATCAAGTTCTGAAGGTG+AGG 0.577593 2_2:-60650494 Msa0261970:CDS
ACCGTGCTGTTACAAGCTGA+AGG 0.578295 2_2:+60651333 None:intergenic
CTTACATAGCTAAGAAGTGA+TGG 0.578724 2_2:+60651778 None:intergenic
AAACTACTCTCCTGTGCTGG+TGG 0.580631 2_2:+60650361 None:intergenic
GTTGTACCACCAAGACCACT+TGG 0.583553 2_2:-60650454 Msa0261970:CDS
CTTGTTCCACTGTATGGTCG+TGG 0.584211 2_2:-60643885 Msa0261970:CDS
AAATCATAATTGTATAATTG+GGG 0.585977 2_2:+60651944 None:intergenic
AATTGTATAATTGGGGTGGG+GGG 0.594122 2_2:+60651951 None:intergenic
ATGGATTAATAGCACCTCAT+GGG 0.600842 2_2:-60650602 Msa0261970:CDS
TGACCACAAAGTGTTACCAC+TGG 0.610639 2_2:+60650652 None:intergenic
GTTGTACCACCTAGACCACT+TGG 0.611866 2_2:-60643834 Msa0261970:CDS
GAAACCACATCAAGTTCTGA+AGG 0.614193 2_2:-60650499 Msa0261970:CDS
CTTGTTCCACTATATGGTCG+TGG 0.622216 2_2:-60650523 Msa0261970:CDS
CCCTTCAGCTTGTAACAGCA+CGG 0.625188 2_2:-60651334 Msa0261970:intron
TTTCTCATTATGTTCCCATG+AGG 0.630818 2_2:+60650588 None:intergenic
CCGTGCTGTTACAAGCTGAA+GGG 0.637119 2_2:+60651334 None:intergenic
TCAAGTGATCTTGGACCAAG+TGG 0.644730 2_2:+60650439 None:intergenic
GAAGGACCAAGTGGTCTAGG+TGG 0.674378 2_2:+60643828 None:intergenic
AGAGAATGTGCAAGATCCGG+TGG 0.678733 2_2:-60644018 Msa0261970:CDS
AACCATGAAGAAGGACCAAG+TGG 0.678753 2_2:+60643819 None:intergenic
TGACCACAAAGAGTTACCAC+CGG 0.680072 2_2:+60644002 None:intergenic
GGAGCATGTGAAAGATCCAG+TGG 0.680623 2_2:-60650668 Msa0261970:CDS
AGTGATGGTGATGATGTGCA+GGG 0.694895 2_2:+60651793 None:intergenic
ATGGACATTCTGTCGAACCG+GGG 0.697290 2_2:-60650769 Msa0261970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATAAAATAAAAATAAA+GGG + chr2_2:60645790-60645809 None:intergenic 0.0%
!! TATATATAAAATAAAAATAA+AGG + chr2_2:60645791-60645810 None:intergenic 0.0%
!!! TATTTTTATTTTATATATAT+CGG - chr2_2:60645792-60645811 Msa0261970:intron 0.0%
!! AAAATCATAATTGTATAATT+GGG + chr2_2:60643838-60643857 None:intergenic 10.0%
!! ATAAAAATAAAAATAGATCA+TGG - chr2_2:60646963-60646982 Msa0261970:intron 10.0%
!!! ACATATTTAAGTATTTTTAT+TGG + chr2_2:60647681-60647700 None:intergenic 10.0%
!!! CAATATTTTTATAATTAGTA+AGG + chr2_2:60648534-60648553 None:intergenic 10.0%
!! TGATAAAATTATTGATATAA+GGG - chr2_2:60648955-60648974 Msa0261970:intron 10.0%
!!! AGCAAATTATATTTTTATAT+AGG + chr2_2:60651614-60651633 None:intergenic 10.0%
!! AAATCATAATTGTATAATTG+GGG + chr2_2:60643837-60643856 None:intergenic 15.0%
!! CAAAATCATAATTGTATAAT+TGG + chr2_2:60643839-60643858 None:intergenic 15.0%
!! AGAGAAAATACTAATATTTA+GGG - chr2_2:60644716-60644735 Msa0261970:intron 15.0%
!!! TAGATCGTAAATTAAATTTT+TGG - chr2_2:60645836-60645855 Msa0261970:intron 15.0%
!!! ATTGATAATTAACTTAACTT+TGG - chr2_2:60647411-60647430 Msa0261970:intron 15.0%
!! TTTAATAAAAGTAGCTATTA+AGG - chr2_2:60647618-60647637 Msa0261970:intron 15.0%
!! TTTAATGATATAAAGATAGT+GGG + chr2_2:60647704-60647723 None:intergenic 15.0%
!!! TTTTATTACTTTTTTAAACG+TGG - chr2_2:60647818-60647837 Msa0261970:intron 15.0%
!!! TTTATTACTTTTTTAAACGT+GGG - chr2_2:60647819-60647838 Msa0261970:intron 15.0%
!!! ATTTGTGATTTGATTTTTTT+TGG - chr2_2:60648033-60648052 Msa0261970:intron 15.0%
!!! TTTGTGATTTGATTTTTTTT+GGG - chr2_2:60648034-60648053 Msa0261970:intron 15.0%
!!! ATCTCTACAATATTTTTTTT+TGG - chr2_2:60648425-60648444 Msa0261970:intron 15.0%
!! AAATTTATTATCCAAGAAAT+TGG - chr2_2:60648472-60648491 Msa0261970:intron 15.0%
!! GTGATAAAATTATTGATATA+AGG - chr2_2:60648954-60648973 Msa0261970:intron 15.0%
!! ATCAAGTAATATTATTGTTA+TGG - chr2_2:60649173-60649192 Msa0261970:intron 15.0%
!! TCAAGTAATATTATTGTTAT+GGG - chr2_2:60649174-60649193 Msa0261970:intron 15.0%
!!! TTAATTAAATTTTAGCCTTT+TGG + chr2_2:60649223-60649242 None:intergenic 15.0%
!!! TATGATTTTTTGTTTTGTTT+TGG - chr2_2:60649353-60649372 Msa0261970:intron 15.0%
!! ACATCTTAAAATAAATCAAA+GGG + chr2_2:60649582-60649601 None:intergenic 15.0%
!! AACATCTTAAAATAAATCAA+AGG + chr2_2:60649583-60649602 None:intergenic 15.0%
!!! ATGGTTTTTTTTAGTTATAA+TGG + chr2_2:60650026-60650045 None:intergenic 15.0%
!! ATGATTAAAATCAAAGTAAA+AGG - chr2_2:60650496-60650515 Msa0261970:CDS 15.0%
!! TGATTAAAATCAAAGTAAAA+GGG - chr2_2:60650497-60650516 Msa0261970:CDS 15.0%
!! TATATTTAACTAGTTAAAAG+AGG - chr2_2:60650581-60650600 Msa0261970:CDS 15.0%
!! ATATTTAACTAGTTAAAAGA+GGG - chr2_2:60650582-60650601 Msa0261970:CDS 15.0%
!!! TTTTATTCTTTGTATATAGT+TGG - chr2_2:60650837-60650856 Msa0261970:intron 15.0%
!! TTTATTCTTTGTATATAGTT+GGG - chr2_2:60650838-60650857 Msa0261970:intron 15.0%
!!! ATCTTTTATTTGTTTTTGAA+GGG + chr2_2:60650878-60650897 None:intergenic 15.0%
!!! TATCTTTTATTTGTTTTTGA+AGG + chr2_2:60650879-60650898 None:intergenic 15.0%
!! AAAACAAATAAAAGATAAAG+TGG - chr2_2:60650882-60650901 Msa0261970:intron 15.0%
!! CTAAAAATCATATGATATAT+AGG + chr2_2:60650974-60650993 None:intergenic 15.0%
!! AAAAGTGAAAAATCCTTAAT+TGG + chr2_2:60643926-60643945 None:intergenic 20.0%
!! ATCTCTTTCAGAAAAAATAA+AGG + chr2_2:60644520-60644539 None:intergenic 20.0%
!! ATGAATGAAACTTCATTTAT+TGG - chr2_2:60644579-60644598 Msa0261970:intron 20.0%
!!! AAATCATTCAAAGATTTTGA+AGG - chr2_2:60644626-60644645 Msa0261970:intron 20.0%
!! CAGAGAAAATACTAATATTT+AGG - chr2_2:60644715-60644734 Msa0261970:intron 20.0%
!!! ACTTTTTTTAAGTTTCAAGT+TGG - chr2_2:60644757-60644776 Msa0261970:intron 20.0%
!!! CTTTTTTTAAGTTTCAAGTT+GGG - chr2_2:60644758-60644777 Msa0261970:intron 20.0%
!!! TTATGTATGACATTTTAAGT+TGG - chr2_2:60644832-60644851 Msa0261970:intron 20.0%
!! TGTCATAATTCATACAAATT+AGG + chr2_2:60644871-60644890 None:intergenic 20.0%
!! TTAATCCATTTGTAAATACA+AGG + chr2_2:60645165-60645184 None:intergenic 20.0%
!! ATGATATTCAATCAAATTTC+CGG + chr2_2:60645482-60645501 None:intergenic 20.0%
!! TAATTTACGATCTATAGTTA+TGG + chr2_2:60645830-60645849 None:intergenic 20.0%
!! GAATAAATTGTTGATCTAAT+GGG + chr2_2:60646275-60646294 None:intergenic 20.0%
!! AGAATAAATTGTTGATCTAA+TGG + chr2_2:60646276-60646295 None:intergenic 20.0%
!! AAATCAAGTTACTAACTTAT+TGG - chr2_2:60646697-60646716 Msa0261970:intron 20.0%
!! AATAAAAATAGATCATGGAT+AGG - chr2_2:60646968-60646987 Msa0261970:intron 20.0%
!! ATAAAAATAGATCATGGATA+GGG - chr2_2:60646969-60646988 Msa0261970:intron 20.0%
!! TAACAATTTCAATAGTGAAA+TGG - chr2_2:60647052-60647071 Msa0261970:intron 20.0%
!! AACAATTTCAATAGTGAAAT+GGG - chr2_2:60647053-60647072 Msa0261970:intron 20.0%
!! AGATAAAACTTGATAAAGAA+AGG + chr2_2:60647098-60647117 None:intergenic 20.0%
!! ATAAAACTTGATAAAACTTG+TGG + chr2_2:60647172-60647191 None:intergenic 20.0%
!! TTTATCTATCTCAAAAAAGA+TGG - chr2_2:60647187-60647206 Msa0261970:intron 20.0%
!! GTTTAATGATATAAAGATAG+TGG + chr2_2:60647705-60647724 None:intergenic 20.0%
!! TTCTTGGATAATAAATTTCT+TGG + chr2_2:60648470-60648489 None:intergenic 20.0%
!! AAAAAATATCACCAATTTCT+TGG + chr2_2:60648486-60648505 None:intergenic 20.0%
!!! AGAAATTGGTGATATTTTTT+TGG - chr2_2:60648486-60648505 Msa0261970:intron 20.0%
!!! GAAATTGGTGATATTTTTTT+GGG - chr2_2:60648487-60648506 Msa0261970:intron 20.0%
!!! AATTAGTAAGGTACATTTTT+AGG + chr2_2:60648522-60648541 None:intergenic 20.0%
!!! TGATATTTTAGTTGAAAATG+AGG - chr2_2:60648603-60648622 Msa0261970:intron 20.0%
!!! CTTTTTTGTCAATAACATAT+AGG - chr2_2:60648819-60648838 Msa0261970:intron 20.0%
!! TATTGATATAAGGGATTAAA+TGG - chr2_2:60648964-60648983 Msa0261970:intron 20.0%
!! ATTGATATAAGGGATTAAAT+GGG - chr2_2:60648965-60648984 Msa0261970:intron 20.0%
!! TATTGTTATGGGTTTAATAT+TGG - chr2_2:60649185-60649204 Msa0261970:intron 20.0%
!!! TTTTTTGAGTTATTATTCTC+AGG - chr2_2:60649256-60649275 Msa0261970:intron 20.0%
!! AACAAAACAAAAAATCATAG+AGG + chr2_2:60649352-60649371 None:intergenic 20.0%
!! ATACGAGATCAAAAAAATTT+AGG + chr2_2:60649607-60649626 None:intergenic 20.0%
!!! GTTTTTTTTAGTTATAATGG+AGG + chr2_2:60650023-60650042 None:intergenic 20.0%
!!! AGTGTACTTTTTTTTTTTGA+AGG + chr2_2:60650140-60650159 None:intergenic 20.0%
!! ACTTTAAATATGATTATCTC+CGG - chr2_2:60650316-60650335 Msa0261970:intron 20.0%
!! TTTCAATAAATTCTCTTTAC+CGG + chr2_2:60650338-60650357 None:intergenic 20.0%
!! TTTCAATAAATTCTCTTTAC+CGG + chr2_2:60650338-60650357 None:intergenic 20.0%
!! TATTTAACTAGTTAAAAGAG+GGG - chr2_2:60650583-60650602 Msa0261970:CDS 20.0%
!!! TATTTTTTTGAAAAATCACG+AGG - chr2_2:60650798-60650817 Msa0261970:intron 20.0%
!!! TTCATTGCAACTTTTTTATA+TGG - chr2_2:60651264-60651283 Msa0261970:intron 20.0%
!!! TCATTGCAACTTTTTTATAT+GGG - chr2_2:60651265-60651284 Msa0261970:intron 20.0%
!! TATAATAGTATATGGTCAAA+AGG + chr2_2:60651342-60651361 None:intergenic 20.0%
!! AAGTACAGTATAATAGTATA+TGG + chr2_2:60651350-60651369 None:intergenic 20.0%
!!! AAATTTCTAATTTGCATACT+GGG + chr2_2:60651862-60651881 None:intergenic 20.0%
!! ATTGTTAACTCGTAAGTTTT+TGG + chr2_2:60644112-60644131 None:intergenic 25.0%
! AAAAACTTACGAGTTAACAA+TGG - chr2_2:60644111-60644130 Msa0261970:CDS 25.0%
!!! GATGCATGTTTTTTACATAA+AGG - chr2_2:60644245-60644264 Msa0261970:intron 25.0%
!! TTTTGTTGAAAATGAAGCAA+AGG - chr2_2:60644484-60644503 Msa0261970:intron 25.0%
! TTACAAACAAATTGTACTTG+TGG + chr2_2:60644804-60644823 None:intergenic 25.0%
! TGAATTATGACAAATGTTAG+AGG - chr2_2:60644879-60644898 Msa0261970:intron 25.0%
! GAATTATGACAAATGTTAGA+GGG - chr2_2:60644880-60644899 Msa0261970:intron 25.0%
! AATTATGACAAATGTTAGAG+GGG - chr2_2:60644881-60644900 Msa0261970:intron 25.0%
!! TTTTGAATGCAACATATGTT+TGG - chr2_2:60645089-60645108 Msa0261970:intron 25.0%
!! GAAATTTCTGATTTGCATAT+TGG + chr2_2:60645225-60645244 None:intergenic 25.0%
! GATTGAATATCATATGTAAG+AGG - chr2_2:60645489-60645508 Msa0261970:intron 25.0%
!! TAATTGGCTTAAATCATAGT+GGG - chr2_2:60645560-60645579 Msa0261970:intron 25.0%
!!! TTCAAAGTTTAGCCTTAATA+CGG + chr2_2:60645876-60645895 None:intergenic 25.0%
! GAAGATCAGAAATTTATCAA+TGG - chr2_2:60645893-60645912 Msa0261970:intron 25.0%
! ATCAGAAATTTATCAATGGA+TGG - chr2_2:60645897-60645916 Msa0261970:intron 25.0%
!!! AGTTTTAGATATGAGTCTTT+TGG - chr2_2:60646063-60646082 Msa0261970:intron 25.0%
!!! GTTTTAGATATGAGTCTTTT+GGG - chr2_2:60646064-60646083 Msa0261970:intron 25.0%
! AAAAACATTGTGTTAAACGT+TGG - chr2_2:60646175-60646194 Msa0261970:intron 25.0%
! CAATTTATTCTCACAACATT+TGG - chr2_2:60646285-60646304 Msa0261970:intron 25.0%
! TGCAATAAGTTATATGAAGT+AGG + chr2_2:60646371-60646390 None:intergenic 25.0%
! AAAGATTCATTGCAGATTTA+TGG + chr2_2:60646598-60646617 None:intergenic 25.0%
!!! ATGGAAGAATTTTCAAGTAA+AGG - chr2_2:60646646-60646665 Msa0261970:intron 25.0%
!!! TGGAAGAATTTTCAAGTAAA+GGG - chr2_2:60646647-60646666 Msa0261970:intron 25.0%
! GTGGTAATATAATCTCAATT+TGG - chr2_2:60646930-60646949 Msa0261970:intron 25.0%
! TAACGCAAGTGTAAAAAAAT+AGG - chr2_2:60647283-60647302 Msa0261970:intron 25.0%
! GTAATAAAATGTGTACTACA+TGG + chr2_2:60647766-60647785 None:intergenic 25.0%
! GTAATAAAATGTGTACTACT+TGG + chr2_2:60647807-60647826 None:intergenic 25.0%
! GGATAACAAGATAACATTAA+AGG - chr2_2:60648055-60648074 Msa0261970:intron 25.0%
!! CTATGGTTATCTGTTTATTT+TGG + chr2_2:60648089-60648108 None:intergenic 25.0%
! GTTAGCAAATCAAACAAAAA+GGG + chr2_2:60648389-60648408 None:intergenic 25.0%
! TGTTAGCAAATCAAACAAAA+AGG + chr2_2:60648390-60648409 None:intergenic 25.0%
!!! TTTTGTTTGATTTGCTAACA+TGG - chr2_2:60648390-60648409 Msa0261970:intron 25.0%
!! AATCTCAATCTTTTCTTTAG+AGG - chr2_2:60648640-60648659 Msa0261970:intron 25.0%
! AAGAAAATTGACACTACTAA+TGG + chr2_2:60648668-60648687 None:intergenic 25.0%
!! ATTAGTAGTGTCAATTTTCT+TGG - chr2_2:60648667-60648686 Msa0261970:intron 25.0%
!! ATTTTCTTGGATTGATTGAA+AGG - chr2_2:60648680-60648699 Msa0261970:intron 25.0%
! TACTTGTAGCATATAAAAAG+AGG - chr2_2:60649075-60649094 Msa0261970:intron 25.0%
!! TTCTGTTAAGCATTTGATTT+AGG - chr2_2:60649377-60649396 Msa0261970:intron 25.0%
! TATCTCTTTCATGTATTTGT+TGG - chr2_2:60649979-60649998 Msa0261970:intron 25.0%
! CAATGGTGAAAACAAAATTA+TGG + chr2_2:60650045-60650064 None:intergenic 25.0%
!!! AATTTTGTTTTCACCATTGT+TGG - chr2_2:60650046-60650065 Msa0261970:intron 25.0%
! TTAATTTCTCTAGTCAGATA+AGG - chr2_2:60650178-60650197 Msa0261970:intron 25.0%
! GATTTAAATAGGATTATCTC+CGG - chr2_2:60650378-60650397 Msa0261970:CDS 25.0%
!!! TTTTTTTTCCTTTTAGAGAG+AGG + chr2_2:60650523-60650542 None:intergenic 25.0%
! TGTTAGCGTAATAAAAAAAG+CGG + chr2_2:60650618-60650637 None:intergenic 25.0%
!!! TTTTATTTGTTTTTGAAGGG+AGG + chr2_2:60650875-60650894 None:intergenic 25.0%
! AGTGGAAAATTATATAGCAA+AGG - chr2_2:60650900-60650919 Msa0261970:intron 25.0%
! TGCTATATATATCACATTCA+CGG - chr2_2:60651086-60651105 Msa0261970:intron 25.0%
!!! CATTGCAACTTTTTTATATG+GGG - chr2_2:60651266-60651285 Msa0261970:intron 25.0%
! ATACTATTATACTGTACTTC+TGG - chr2_2:60651351-60651370 Msa0261970:five_prime_UTR 25.0%
! AAACTATGAAATCTTCTCAA+AGG + chr2_2:60651435-60651454 None:intergenic 25.0%
!! GAAATTTCTAATTTGCATAC+TGG + chr2_2:60651863-60651882 None:intergenic 25.0%
! AAAACAACATCAACTTCTAA+AGG - chr2_2:60651917-60651936 Msa0261970:five_prime_UTR 25.0%
ATAATTGTATAATTGGGGTG+GGG + chr2_2:60643832-60643851 None:intergenic 30.0%
CATAATTGTATAATTGGGGT+GGG + chr2_2:60643833-60643852 None:intergenic 30.0%
TCATAATTGTATAATTGGGG+TGG + chr2_2:60643834-60643853 None:intergenic 30.0%
!! AAGTTTTTGGAAGCAAACTA+AGG + chr2_2:60644099-60644118 None:intergenic 30.0%
TCTGAAAGAGATCAAAATTC+TGG - chr2_2:60644528-60644547 Msa0261970:intron 30.0%
!!! TGTATGACATTTTAAGTTGG+TGG - chr2_2:60644835-60644854 Msa0261970:intron 30.0%
!!! ATGTTCCATTTTTTGAAGTC+TGG - chr2_2:60644923-60644942 Msa0261970:intron 30.0%
! CAGTTTTACCTTTCAAATTC+AGG - chr2_2:60644968-60644987 Msa0261970:intron 30.0%
TTGCACATTTGCTTACAATA+TGG - chr2_2:60645438-60645457 Msa0261970:intron 30.0%
! CTAATTGGCTTAAATCATAG+TGG - chr2_2:60645559-60645578 Msa0261970:intron 30.0%
TTCAACACTCATTCTCTTAT+TGG + chr2_2:60645642-60645661 None:intergenic 30.0%
TACATATGAGAGAAATGCTA+GGG + chr2_2:60645687-60645706 None:intergenic 30.0%
TTACATATGAGAGAAATGCT+AGG + chr2_2:60645688-60645707 None:intergenic 30.0%
AAGGGAATAAAGCAAAATCA+TGG + chr2_2:60645772-60645791 None:intergenic 30.0%
TTCTTTAGTTGACCGTATTA+AGG - chr2_2:60645861-60645880 Msa0261970:intron 30.0%
TGAGTTACCTGAGAATAAAT+TGG - chr2_2:60646036-60646055 Msa0261970:intron 30.0%
AAATCAAGATCAACTTTGTG+CGG - chr2_2:60646406-60646425 Msa0261970:intron 30.0%
! TTTGGTCTTTGATTTCTCAT+TGG - chr2_2:60646492-60646511 Msa0261970:intron 30.0%
! TCTTTGATTTCTCATTGGTT+AGG - chr2_2:60646497-60646516 Msa0261970:intron 30.0%
!!! TTTTATGATTTGCTTGCGTT+TGG - chr2_2:60646615-60646634 Msa0261970:intron 30.0%
!! TTTATGATTTGCTTGCGTTT+GGG - chr2_2:60646616-60646635 Msa0261970:intron 30.0%
TCAAGTTACTAACTTATTGG+TGG - chr2_2:60646700-60646719 Msa0261970:intron 30.0%
TTCAATAGTGAAATGGGATT+TGG - chr2_2:60647059-60647078 Msa0261970:intron 30.0%
!! TCAAGTTTTATCTATCTCTC+AGG - chr2_2:60647105-60647124 Msa0261970:intron 30.0%
!! CAAGTTTTATCTATCTCTCA+GGG - chr2_2:60647106-60647125 Msa0261970:intron 30.0%
! TTAACTTAACTTTGGAAGAG+AGG - chr2_2:60647419-60647438 Msa0261970:intron 30.0%
!! GGAATTAAAACAGAGGTATT+TGG + chr2_2:60647496-60647515 None:intergenic 30.0%
!!! CTCTGTTTTAATTCCATATC+CGG - chr2_2:60647501-60647520 Msa0261970:intron 30.0%
TAATCAACCACTTCTTTAAC+CGG + chr2_2:60647523-60647542 None:intergenic 30.0%
CCTTATTAGTGTATTACCAT+TGG + chr2_2:60647655-60647674 None:intergenic 30.0%
CCAATGGTAATACACTAATA+AGG - chr2_2:60647652-60647671 Msa0261970:intron 30.0%
TTATTACTCCTTTATGCAAG+TGG - chr2_2:60647779-60647798 Msa0261970:intron 30.0%
TATTACTCCTTTATGCAAGT+GGG - chr2_2:60647780-60647799 Msa0261970:intron 30.0%
!!! CTCATTTTTTCTTCCTCTAA+TGG - chr2_2:60647902-60647921 Msa0261970:intron 30.0%
!!! ATTTTTTCTTCCTCTAATGG+AGG - chr2_2:60647905-60647924 Msa0261970:intron 30.0%
!!! TTTTTTCTTCCTCTAATGGA+GGG - chr2_2:60647906-60647925 Msa0261970:intron 30.0%
TAATCAAAATAGTAGCAGTG+TGG - chr2_2:60648007-60648026 Msa0261970:intron 30.0%
TAACGCAAGTGTAAAAAAAC+AGG + chr2_2:60648251-60648270 None:intergenic 30.0%
AGCAGAATTCAAAAAGATGT+TGG - chr2_2:60648335-60648354 Msa0261970:intron 30.0%
! ACTGACGTATGTTAATGTTT+TGG - chr2_2:60648363-60648382 Msa0261970:intron 30.0%
TTGGCACATTTGTTCTTAAA+AGG + chr2_2:60648451-60648470 None:intergenic 30.0%
!! GGTACATTTTTAGGAACAAA+GGG + chr2_2:60648513-60648532 None:intergenic 30.0%
!! AGGTACATTTTTAGGAACAA+AGG + chr2_2:60648514-60648533 None:intergenic 30.0%
TGAAGATTCTCTCAATTTCT+CGG + chr2_2:60648571-60648590 None:intergenic 30.0%
TGTCAATAACATATAGGATG+AGG - chr2_2:60648825-60648844 Msa0261970:intron 30.0%
! AATTTGATACGCGATGTTTT+GGG - chr2_2:60648850-60648869 Msa0261970:intron 30.0%
!! AATTTTCACGGTTGATATGT+CGG + chr2_2:60648888-60648907 None:intergenic 30.0%
! GAGACATGCATTAATTTTCA+CGG + chr2_2:60648900-60648919 None:intergenic 30.0%
ATTCTTAGGTGCTAAACTTT+AGG - chr2_2:60649298-60649317 Msa0261970:intron 30.0%
! TTTTTAAACTTGTGCCTCAA+GGG + chr2_2:60649419-60649438 None:intergenic 30.0%
TTTCTTAACTTATGCCCTAA+GGG - chr2_2:60649541-60649560 Msa0261970:intron 30.0%
AAATCTTGAGAGAGATAACA+GGG + chr2_2:60649727-60649746 None:intergenic 30.0%
AAAATCTTGAGAGAGATAAC+AGG + chr2_2:60649728-60649747 None:intergenic 30.0%
ATTTGAGAAGAAGAGAATGA+GGG - chr2_2:60649862-60649881 Msa0261970:intron 30.0%
!!! TTTTTTGAAAAATCACGAGG+AGG - chr2_2:60650801-60650820 Msa0261970:intron 30.0%
! TCTTTATCGTGGATTAAACT+TGG - chr2_2:60650925-60650944 Msa0261970:intron 30.0%
TAACAGAATTACCGAATTGA+GGG + chr2_2:60651055-60651074 None:intergenic 30.0%
ATAACAGAATTACCGAATTG+AGG + chr2_2:60651056-60651075 None:intergenic 30.0%
!!! AGCAGAACAGCAATTTTTTA+TGG + chr2_2:60651384-60651403 None:intergenic 30.0%
! TAAAAAATTGCTGTTCTGCT+TGG - chr2_2:60651384-60651403 Msa0261970:five_prime_UTR 30.0%
ATGAAATCTTCTCAAAGGAA+AGG + chr2_2:60651430-60651449 None:intergenic 30.0%
TTGTTATATATGATCCTCCT+TGG - chr2_2:60651643-60651662 Msa0261970:five_prime_UTR 30.0%
TTTGTGGTCATCTTTATTGT+TGG - chr2_2:60651789-60651808 Msa0261970:five_prime_UTR 30.0%
TTCAACCATTTGTAAATGCA+GGG + chr2_2:60651815-60651834 None:intergenic 30.0%
ATTCAACCATTTGTAAATGC+AGG + chr2_2:60651816-60651835 None:intergenic 30.0%
TAATTGTATAATTGGGGTGG+GGG + chr2_2:60643831-60643850 None:intergenic 35.0%
GAAAGTTAGTTGTGTGATGA+AGG + chr2_2:60643963-60643982 None:intergenic 35.0%
CTTACATAGCTAAGAAGTGA+TGG + chr2_2:60644003-60644022 None:intergenic 35.0%
!!! AATTTTGGTTCCAACACAAG+AGG - chr2_2:60644179-60644198 Msa0261970:intron 35.0%
AAGAGGTAACTTGGACATAA+AGG - chr2_2:60644196-60644215 Msa0261970:intron 35.0%
TTAGAGGGGACAAATTATAC+TGG - chr2_2:60644895-60644914 Msa0261970:intron 35.0%
TAGCTCCAGACTTCAAAAAA+TGG + chr2_2:60644931-60644950 None:intergenic 35.0%
ATATGGTGCCTGAATTTGAA+AGG + chr2_2:60644979-60644998 None:intergenic 35.0%
TTTGTGGTCATCTCTATTGT+TGG - chr2_2:60645139-60645158 Msa0261970:intron 35.0%
!! GTTGGCCTTGTATTTACAAA+TGG - chr2_2:60645157-60645176 Msa0261970:intron 35.0%
!! AATGGATTAATAGCACCTCA+TGG - chr2_2:60645175-60645194 Msa0261970:intron 35.0%
! ATGGATTAATAGCACCTCAT+GGG - chr2_2:60645176-60645195 Msa0261970:intron 35.0%
TTTCTCATTATGTTCCCATG+AGG + chr2_2:60645193-60645212 None:intergenic 35.0%
GATTTGCATATTGGACATTC+TGG + chr2_2:60645216-60645235 None:intergenic 35.0%
TCAACACTTGTTCCACTATA+TGG - chr2_2:60645249-60645268 Msa0261970:intron 35.0%
TCCGGAAATCAAGCTTATAT+GGG + chr2_2:60645464-60645483 None:intergenic 35.0%
TTCCGGAAATCAAGCTTATA+TGG + chr2_2:60645465-60645484 None:intergenic 35.0%
!! ATTAGAAAGTGAGTGTTGGA+GGG + chr2_2:60645544-60645563 None:intergenic 35.0%
!! AATTAGAAAGTGAGTGTTGG+AGG + chr2_2:60645545-60645564 None:intergenic 35.0%
TCCAACACTCACTTTCTAAT+TGG - chr2_2:60645544-60645563 Msa0261970:intron 35.0%
! GAAATGGGTTCCACTTAAAA+TGG - chr2_2:60645595-60645614 Msa0261970:intron 35.0%
!! TAAAATGGTGGGTCATACAT+TGG - chr2_2:60645610-60645629 Msa0261970:intron 35.0%
CGCTTTAGCATGTATTGAAT+CGG - chr2_2:60645725-60645744 Msa0261970:intron 35.0%
TTTATCAATGGATGGTCGTT+TGG - chr2_2:60645905-60645924 Msa0261970:intron 35.0%
ACTGACACCAATTTATTCTC+AGG + chr2_2:60646046-60646065 None:intergenic 35.0%
!! TAGATATGAGTCTTTTGGGT+TGG - chr2_2:60646068-60646087 Msa0261970:intron 35.0%
!!! AGATATGAGTCTTTTGGGTT+GGG - chr2_2:60646069-60646088 Msa0261970:intron 35.0%
AATCAAGATCAACTTTGTGC+GGG - chr2_2:60646407-60646426 Msa0261970:intron 35.0%
! GTCACTAGTTTGCATCAATT+TGG - chr2_2:60646474-60646493 Msa0261970:intron 35.0%
AGAGTGGTAATTAAAAGCAG+AGG + chr2_2:60646745-60646764 None:intergenic 35.0%
!! CTGCTTTTAATTACCACTCT+TGG - chr2_2:60646745-60646764 Msa0261970:intron 35.0%
ACTTCATCCCATTATGTGTT+TGG - chr2_2:60646770-60646789 Msa0261970:intron 35.0%
CTTCATCCCATTATGTGTTT+GGG - chr2_2:60646771-60646790 Msa0261970:intron 35.0%
ATAGCACCCAAACACATAAT+GGG + chr2_2:60646780-60646799 None:intergenic 35.0%
TATAGCACCCAAACACATAA+TGG + chr2_2:60646781-60646800 None:intergenic 35.0%
AAGCATCCAAATGAGTACTT+TGG - chr2_2:60647025-60647044 Msa0261970:intron 35.0%
ATCCAAATGAGTACTTTGGT+GGG - chr2_2:60647029-60647048 Msa0261970:intron 35.0%
GATAAAGAAAGGAGAATGAG+AGG + chr2_2:60647087-60647106 None:intergenic 35.0%
CGGATATGGAATTAAAACAG+AGG + chr2_2:60647503-60647522 None:intergenic 35.0%
TTGTTAAGGAACTACCATTG+TGG + chr2_2:60647551-60647570 None:intergenic 35.0%
ACAATGGTAGTTCCTTAACA+AGG - chr2_2:60647550-60647569 Msa0261970:intron 35.0%
CATTTAAGGAGTCCTTGTTA+AGG + chr2_2:60647565-60647584 None:intergenic 35.0%
CTTAACAAGGACTCCTTAAA+TGG - chr2_2:60647563-60647582 Msa0261970:intron 35.0%
AAATAAGTGATGTGTCACGT+GGG + chr2_2:60647591-60647610 None:intergenic 35.0%
TAAATAAGTGATGTGTCACG+TGG + chr2_2:60647592-60647611 None:intergenic 35.0%
ACATGGTCTCACTTGTAAAA+AGG + chr2_2:60647749-60647768 None:intergenic 35.0%
AAGGAACGGACAACTATATA+AGG + chr2_2:60647874-60647893 None:intergenic 35.0%
TATAGTTGTCCGTTCCTTAA+CGG - chr2_2:60647876-60647895 Msa0261970:intron 35.0%
AGAGTGATCCTTGTTAAGTA+AGG - chr2_2:60647939-60647958 Msa0261970:intron 35.0%
! ATTACGAGCATTGCATGTAT+GGG + chr2_2:60647991-60648010 None:intergenic 35.0%
!! AGTTGATAATTAACCAGACG+TGG + chr2_2:60648123-60648142 None:intergenic 35.0%
ACAATACAAAAAGGTGGGAT+GGG + chr2_2:60648795-60648814 None:intergenic 35.0%
AACAATACAAAAAGGTGGGA+TGG + chr2_2:60648796-60648815 None:intergenic 35.0%
! GAATTTGATACGCGATGTTT+TGG - chr2_2:60648849-60648868 Msa0261970:intron 35.0%
! ATTTGATACGCGATGTTTTG+GGG - chr2_2:60648851-60648870 Msa0261970:intron 35.0%
!!! ACTAGTGTTAGACTTTTTCG+AGG + chr2_2:60649148-60649167 None:intergenic 35.0%
!! AATTTTAGCCTTTTGGATGC+AGG + chr2_2:60649216-60649235 None:intergenic 35.0%
AAATTCCAGCCTCTATTCTT+AGG - chr2_2:60649284-60649303 Msa0261970:intron 35.0%
AGTTTAGCACCTAAGAATAG+AGG + chr2_2:60649296-60649315 None:intergenic 35.0%
! GTTTTTAAACTTGTGCCTCA+AGG + chr2_2:60649420-60649439 None:intergenic 35.0%
GTTTCTTAACTTATGCCCTA+AGG - chr2_2:60649540-60649559 Msa0261970:intron 35.0%
! ATTTAAGGCTCGTAAAATGC+TGG - chr2_2:60649695-60649714 Msa0261970:intron 35.0%
! TTTAAGGCTCGTAAAATGCT+GGG - chr2_2:60649696-60649715 Msa0261970:intron 35.0%
GATTTGAGAAGAAGAGAATG+AGG - chr2_2:60649861-60649880 Msa0261970:intron 35.0%
GCACATATCAAAACCAACAA+TGG + chr2_2:60650062-60650081 None:intergenic 35.0%
AAGGTCACAATGGATAACAA+TGG - chr2_2:60650197-60650216 Msa0261970:intron 35.0%
TGTATATAGTTGGGCTCTAT+TGG - chr2_2:60650847-60650866 Msa0261970:intron 35.0%
GTATATAGTTGGGCTCTATT+GGG - chr2_2:60650848-60650867 Msa0261970:intron 35.0%
AACAGAATTACCGAATTGAG+GGG + chr2_2:60651054-60651073 None:intergenic 35.0%
AGCTATGAAAAACCCTAACT+TGG + chr2_2:60651149-60651168 None:intergenic 35.0%
GAGAAGAAATTGTGTGTTGA+AGG + chr2_2:60651191-60651210 None:intergenic 35.0%
! TAAGAAGTGATAGTGATGTG+CGG + chr2_2:60651213-60651232 None:intergenic 35.0%
! TGACATGTGACGTAACTTTT+TGG - chr2_2:60651577-60651596 Msa0261970:five_prime_UTR 35.0%
!!! GACGTAACTTTTTGGTGTTT+TGG - chr2_2:60651585-60651604 Msa0261970:five_prime_UTR 35.0%
AATTGTATAATTGGGGTGGG+GGG + chr2_2:60643830-60643849 None:intergenic 40.0%
ATGCATTCTGCTGCCAATTA+AGG - chr2_2:60643910-60643929 Msa0261970:CDS 40.0%
TTCCAACACAAGAGGTAACT+TGG - chr2_2:60644187-60644206 Msa0261970:intron 40.0%
TGTCCATTAGCACTAGCATA+TGG + chr2_2:60644996-60645015 None:intergenic 40.0%
! TAATGGACATTCTGTCGAAC+CGG - chr2_2:60645007-60645026 Msa0261970:intron 40.0%
! GAAACCACATCAAGTTCTGA+AGG - chr2_2:60645279-60645298 Msa0261970:intron 40.0%
GTTGCAGTATCAAGTGATCT+TGG + chr2_2:60645351-60645370 None:intergenic 40.0%
GCCCATATAAGCTTGATTTC+CGG - chr2_2:60645460-60645479 Msa0261970:intron 40.0%
GCCAATTAGAAAGTGAGTGT+TGG + chr2_2:60645548-60645567 None:intergenic 40.0%
!!! TCATAGTGGGTCTCACATTT+TGG - chr2_2:60645573-60645592 Msa0261970:intron 40.0%
!! TGGGTCTCACATTTTGGAAA+TGG - chr2_2:60645579-60645598 Msa0261970:intron 40.0%
!! GGGTCTCACATTTTGGAAAT+GGG - chr2_2:60645580-60645599 Msa0261970:intron 40.0%
ATGGGTTCCACTTAAAATGG+TGG - chr2_2:60645598-60645617 Msa0261970:intron 40.0%
TGGGTTCCACTTAAAATGGT+GGG - chr2_2:60645599-60645618 Msa0261970:intron 40.0%
! GTATGACCCACCATTTTAAG+TGG + chr2_2:60645608-60645627 None:intergenic 40.0%
ATGGGTCCTCTACTTTATTC+TGG - chr2_2:60645960-60645979 Msa0261970:intron 40.0%
GTCCTCTACTTTATTCTGGT+GGG - chr2_2:60645964-60645983 Msa0261970:intron 40.0%
CATTGTGTTAAACGTTGGAG+AGG - chr2_2:60646180-60646199 Msa0261970:intron 40.0%
TTCTCACAACATTTGGCACA+AGG - chr2_2:60646292-60646311 Msa0261970:intron 40.0%
AAGTGGTCGGAAATGTAAGA+AGG + chr2_2:60646539-60646558 None:intergenic 40.0%
CATTGCAGATTTATGGCACT+TGG + chr2_2:60646591-60646610 None:intergenic 40.0%
CATCCAAATGAGTACTTTGG+TGG - chr2_2:60647028-60647047 Msa0261970:intron 40.0%
! TACCCACCAAAGTACTCATT+TGG + chr2_2:60647034-60647053 None:intergenic 40.0%
TGATAAAACTTGTGGACCCT+AGG + chr2_2:60647164-60647183 None:intergenic 40.0%
! GTATTTTCGAAATGGCTGCA+GGG + chr2_2:60647247-60647266 None:intergenic 40.0%
TCCATATCCGGTTAAAGAAG+TGG - chr2_2:60647513-60647532 Msa0261970:intron 40.0%
ACCACTTCTTTAACCGGATA+TGG + chr2_2:60647517-60647536 None:intergenic 40.0%
GGTTGATTAAGCATCCACAA+TGG - chr2_2:60647534-60647553 Msa0261970:intron 40.0%
AATAAGTGATGTGTCACGTG+GGG + chr2_2:60647590-60647609 None:intergenic 40.0%
TAAGGACTCAATGACTCCAA+TGG - chr2_2:60647636-60647655 Msa0261970:intron 40.0%
ATAGTTGTCCGTTCCTTAAC+GGG - chr2_2:60647877-60647896 Msa0261970:intron 40.0%
GAAAAAATGAGTCCCCGTTA+AGG + chr2_2:60647893-60647912 None:intergenic 40.0%
! GATTACGAGCATTGCATGTA+TGG + chr2_2:60647992-60648011 None:intergenic 40.0%
! ACGTGGTGGAAGAAAATCTA+TGG + chr2_2:60648106-60648125 None:intergenic 40.0%
TGATAATTAACCAGACGTGG+TGG + chr2_2:60648120-60648139 None:intergenic 40.0%
! TAACTAGCGCATGGGTATTT+TGG - chr2_2:60648273-60648292 Msa0261970:intron 40.0%
! AACTAGCGCATGGGTATTTT+GGG - chr2_2:60648274-60648293 Msa0261970:intron 40.0%
ACACGATGTACGACACATTT+AGG - chr2_2:60648760-60648779 Msa0261970:intron 40.0%
! ACGACACATTTAGGATCATG+TGG - chr2_2:60648769-60648788 Msa0261970:intron 40.0%
! AATGGGCTTAAATTCCCCAT+CGG - chr2_2:60648982-60649001 Msa0261970:intron 40.0%
!! AATGTTAACTTGTGCCCTTG+AGG - chr2_2:60649402-60649421 Msa0261970:intron 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG + chr2_2:60649558-60649577 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG + chr2_2:60649559-60649578 None:intergenic 40.0%
AGAAGAAGAGAATGAGGGAA+AGG - chr2_2:60649867-60649886 Msa0261970:intron 40.0%
! GCAAAGAGTGTACTTGAAAG+TGG + chr2_2:60650114-60650133 None:intergenic 40.0%
CTAGTCAGATAAGGTCACAA+TGG - chr2_2:60650187-60650206 Msa0261970:intron 40.0%
TAAAAGGGCCTCTCTCTAAA+AGG - chr2_2:60650512-60650531 Msa0261970:CDS 40.0%
TAGCAAAGGTCTCTTTATCG+TGG - chr2_2:60650914-60650933 Msa0261970:intron 40.0%
TCATACTTCACCCCTCAATT+CGG - chr2_2:60651041-60651060 Msa0261970:intron 40.0%
TGCTATTCTGCTACCAAGTT+AGG - chr2_2:60651133-60651152 Msa0261970:intron 40.0%
GCTATTCTGCTACCAAGTTA+GGG - chr2_2:60651134-60651153 Msa0261970:intron 40.0%
ACAACTTCTGTTGGAACCTT+TGG + chr2_2:60651711-60651730 None:intergenic 40.0%
TCCAACAGAAGTTGTTCTAG+TGG - chr2_2:60651716-60651735 Msa0261970:five_prime_UTR 40.0%
TCAACTCTTGTTCCACTGTA+TGG - chr2_2:60651887-60651906 Msa0261970:five_prime_UTR 40.0%
! AGTGATGGTGATGATGTGCA+GGG + chr2_2:60643988-60644007 None:intergenic 45.0%
! AAGTGATGGTGATGATGTGC+AGG + chr2_2:60643989-60644008 None:intergenic 45.0%
GTCCAAGTTACCTCTTGTGT+TGG + chr2_2:60644192-60644211 None:intergenic 45.0%
GCACCATATGCTAGTGCTAA+TGG - chr2_2:60644990-60645009 Msa0261970:intron 45.0%
AATGGACATTCTGTCGAACC+GGG - chr2_2:60645008-60645027 Msa0261970:intron 45.0%
GATCCAGTGGTAACACTTTG+TGG - chr2_2:60645123-60645142 Msa0261970:intron 45.0%
! TGACCACAAAGTGTTACCAC+TGG + chr2_2:60645129-60645148 None:intergenic 45.0%
CTTGTTCCACTATATGGTCG+TGG - chr2_2:60645255-60645274 Msa0261970:intron 45.0%
GTTTCACCACGACCATATAG+TGG + chr2_2:60645264-60645283 None:intergenic 45.0%
CTCACCTTCAGAACTTGATG+TGG + chr2_2:60645286-60645305 None:intergenic 45.0%
!! CACATCAAGTTCTGAAGGTG+AGG - chr2_2:60645284-60645303 Msa0261970:intron 45.0%
AAGGTGAGGCTCATCAAGAT+GGG - chr2_2:60645298-60645317 Msa0261970:intron 45.0%
TCAAGTGATCTTGGACCAAG+TGG + chr2_2:60645342-60645361 None:intergenic 45.0%
!! GCTTCTGCTTGTTCTAGTTC+AGG + chr2_2:60645384-60645403 None:intergenic 45.0%
TAGAGGGCAAGAACAGACAT+TGG + chr2_2:60645936-60645955 None:intergenic 45.0%
AATGTCTGTTCTTGCCCTCT+AGG - chr2_2:60645935-60645954 Msa0261970:intron 45.0%
GGTCCTCTACTTTATTCTGG+TGG - chr2_2:60645963-60645982 Msa0261970:intron 45.0%
GTCCCACCAGAATAAAGTAG+AGG + chr2_2:60645969-60645988 None:intergenic 45.0%
!!! TATGAGTCTTTTGGGTTGGG+AGG - chr2_2:60646072-60646091 Msa0261970:intron 45.0%
GCGTAGGCGATTATTAGCAT+GGG - chr2_2:60646117-60646136 Msa0261970:intron 45.0%
TAGGCGATTATTAGCATGGG+AGG - chr2_2:60646120-60646139 Msa0261970:intron 45.0%
GTGTTAAACGTTGGAGAGGA+TGG - chr2_2:60646184-60646203 Msa0261970:intron 45.0%
TCACAACATTTGGCACAAGG+AGG - chr2_2:60646295-60646314 Msa0261970:intron 45.0%
TCCAAACTGAAGCAAGTGGT+CGG + chr2_2:60646552-60646571 None:intergenic 45.0%
AGTGTCCAAACTGAAGCAAG+TGG + chr2_2:60646556-60646575 None:intergenic 45.0%
AAGCACAACACAAGGTGTGA+CGG + chr2_2:60646895-60646914 None:intergenic 45.0%
TCACACCTTGTGTTGTGCTT+GGG - chr2_2:60646895-60646914 Msa0261970:intron 45.0%
TATCTCTCAGGGTATACCCT+AGG - chr2_2:60647117-60647136 Msa0261970:intron 45.0%
! GGTATTTTCGAAATGGCTGC+AGG + chr2_2:60647248-60647267 None:intergenic 45.0%
CCATTTCGAAAATACCCCTG+CGG - chr2_2:60647252-60647271 Msa0261970:intron 45.0%
TGCGTTAGTTAACTACCGCA+GGG + chr2_2:60647270-60647289 None:intergenic 45.0%
TTGCGTTAGTTAACTACCGC+AGG + chr2_2:60647271-60647290 None:intergenic 45.0%
CATACGTCACATCAGAAAGC+AGG + chr2_2:60647472-60647491 None:intergenic 45.0%
ACTTGGTCCCACTTGCATAA+AGG + chr2_2:60647790-60647809 None:intergenic 45.0%
TCTCTCTCCTGGGTAACTAA+CGG + chr2_2:60647847-60647866 None:intergenic 45.0%
TTAGTTACCCAGGAGAGAGA+AGG - chr2_2:60647847-60647866 Msa0261970:intron 45.0%
ATAAGGACCTTCTCTCTCCT+GGG + chr2_2:60647857-60647876 None:intergenic 45.0%
TATAAGGACCTTCTCTCTCC+TGG + chr2_2:60647858-60647877 None:intergenic 45.0%
TAGTTGTCCGTTCCTTAACG+GGG - chr2_2:60647878-60647897 Msa0261970:intron 45.0%
AATGAGTCCCCGTTAAGGAA+CGG + chr2_2:60647888-60647907 None:intergenic 45.0%
CTCTAATGGAGGGTCCTTAA+CGG - chr2_2:60647916-60647935 Msa0261970:intron 45.0%
ACAAGGATCACTCTCCGTTA+AGG + chr2_2:60647933-60647952 None:intergenic 45.0%
! AGATTTTCTTCCACCACGTC+TGG - chr2_2:60648107-60648126 Msa0261970:intron 45.0%
TGCGTTAGTTAACTAGCGCA+TGG - chr2_2:60648264-60648283 Msa0261970:intron 45.0%
GCGTTAGTTAACTAGCGCAT+GGG - chr2_2:60648265-60648284 Msa0261970:intron 45.0%
TAGCACCTAAGAATAGAGGC+TGG + chr2_2:60649292-60649311 None:intergenic 45.0%
AGAGAATGAGGGAAAGGAGA+AGG - chr2_2:60649873-60649892 Msa0261970:intron 45.0%
GAGAATGAGGGAAAGGAGAA+GGG - chr2_2:60649874-60649893 Msa0261970:intron 45.0%
GTGTCTGATCGCAGAGATAA+AGG + chr2_2:60651018-60651037 None:intergenic 45.0%
ATTGAGGGGTGAAGTATGAC+AGG + chr2_2:60651040-60651059 None:intergenic 45.0%
! CGGTTCATCGTTTTCAGTGA+TGG + chr2_2:60651677-60651696 None:intergenic 45.0%
AACCTTTGGCACTAGCACTA+CGG + chr2_2:60651697-60651716 None:intergenic 45.0%
GCCACTAGAACAACTTCTGT+TGG + chr2_2:60651720-60651739 None:intergenic 45.0%
CCTAGAGAATGTGCAAGATC+CGG - chr2_2:60651757-60651776 Msa0261970:five_prime_UTR 45.0%
TGACCACAAAGAGTTACCAC+CGG + chr2_2:60651779-60651798 None:intergenic 45.0%
GTTGGCCCTGCATTTACAAA+TGG - chr2_2:60651807-60651826 Msa0261970:five_prime_UTR 45.0%
AACCATGAAGAAGGACCAAG+TGG + chr2_2:60651962-60651981 None:intergenic 45.0%
!!! TAAAAATAAAGATTAAATTT+TGG - chr2_2:60644164-60644183 Msa0261970:intron 5.0%
!!! AAATAATACATAATTTTTTT+TGG + chr2_2:60649679-60649698 None:intergenic 5.0%
!! AAAAAATTATGTATTATTTA+AGG - chr2_2:60649680-60649699 Msa0261970:intron 5.0%
!!! AATCTAAAATAATTTTTTTT+AGG + chr2_2:60650362-60650381 None:intergenic 5.0%
!!! AAATTATTTTAGATTTAAAT+AGG - chr2_2:60650367-60650386 Msa0261970:intron 5.0%
!!! ATTCTAAAATAATTTTTTTT+AGG + chr2_2:60650424-60650443 None:intergenic 5.0%
! CCGTGCTGTTACAAGCTGAA+GGG + chr2_2:60644447-60644466 None:intergenic 50.0%
CCCTTCAGCTTGTAACAGCA+CGG - chr2_2:60644444-60644463 Msa0261970:intron 50.0%
! ACCGTGCTGTTACAAGCTGA+AGG + chr2_2:60644448-60644467 None:intergenic 50.0%
ATGGACATTCTGTCGAACCG+GGG - chr2_2:60645009-60645028 Msa0261970:intron 50.0%
CATTAGCATCAGCTTTGCCC+CGG + chr2_2:60645029-60645048 None:intergenic 50.0%
GGAGCATGTGAAAGATCCAG+TGG - chr2_2:60645110-60645129 Msa0261970:intron 50.0%
GAAGGTGAGGCTCATCAAGA+TGG - chr2_2:60645297-60645316 Msa0261970:intron 50.0%
GTTGTACCACCAAGACCACT+TGG - chr2_2:60645324-60645343 Msa0261970:intron 50.0%
GATCTTGGACCAAGTGGTCT+TGG + chr2_2:60645336-60645355 None:intergenic 50.0%
AAACTACTCTCCTGTGCTGG+TGG + chr2_2:60645420-60645439 None:intergenic 50.0%
TGCAAACTACTCTCCTGTGC+TGG + chr2_2:60645423-60645442 None:intergenic 50.0%
GGGCAAGAACAGACATTGGA+AGG + chr2_2:60645932-60645951 None:intergenic 50.0%
TGTTCTTGCCCTCTAGGTGA+TGG - chr2_2:60645941-60645960 Msa0261970:intron 50.0%
GTTCTTGCCCTCTAGGTGAT+GGG - chr2_2:60645942-60645961 Msa0261970:intron 50.0%
TAGAGGACCCATCACCTAGA+GGG + chr2_2:60645952-60645971 None:intergenic 50.0%
GGCGTAGGCGATTATTAGCA+TGG - chr2_2:60646116-60646135 Msa0261970:intron 50.0%
GCGATTATTAGCATGGGAGG+AGG - chr2_2:60646123-60646142 Msa0261970:intron 50.0%
TAAACGTTGGAGAGGATGGC+AGG - chr2_2:60646188-60646207 Msa0261970:intron 50.0%
CAAGATCAACTTTGTGCGGG+TGG - chr2_2:60646410-60646429 Msa0261970:intron 50.0%
TCCGACCACTTGCTTCAGTT+TGG - chr2_2:60646548-60646567 Msa0261970:intron 50.0%
!! CTTGCGTTTGGGCGTTGAAA+TGG - chr2_2:60646627-60646646 Msa0261970:intron 50.0%
TGGGATGAAGTCACCAAGAG+TGG + chr2_2:60646761-60646780 None:intergenic 50.0%
AGCACAACACAAGGTGTGAC+GGG + chr2_2:60646894-60646913 None:intergenic 50.0%
GTCACACCTTGTGTTGTGCT+TGG - chr2_2:60646894-60646913 Msa0261970:intron 50.0%
CACACCTTGTGTTGTGCTTG+GGG - chr2_2:60646896-60646915 Msa0261970:intron 50.0%
ACACCTTGTGTTGTGCTTGG+GGG - chr2_2:60646897-60646916 Msa0261970:intron 50.0%
TCAGGGTATACCCTAGGCAT+AGG - chr2_2:60647123-60647142 Msa0261970:intron 50.0%
GGTATACCCTAGGCATAGGT+CGG - chr2_2:60647127-60647146 Msa0261970:intron 50.0%
GTATACCCTAGGCATAGGTC+GGG - chr2_2:60647128-60647147 Msa0261970:intron 50.0%
TATACCCTAGGCATAGGTCG+GGG - chr2_2:60647129-60647148 Msa0261970:intron 50.0%
!!! CCGCAGGGGTATTTTCGAAA+TGG + chr2_2:60647255-60647274 None:intergenic 50.0%
GCGTTAGTTAACTACCGCAG+GGG + chr2_2:60647269-60647288 None:intergenic 50.0%
ATGCGTGAGTTAACTCACGC+TGG - chr2_2:60647372-60647391 Msa0261970:intron 50.0%
TGTCACGTGGGGTCCATTTA+AGG + chr2_2:60647579-60647598 None:intergenic 50.0%
CTCTCTCCTGGGTAACTAAC+GGG + chr2_2:60647846-60647865 None:intergenic 50.0%
CGTTAAGGACCCTCCATTAG+AGG + chr2_2:60647918-60647937 None:intergenic 50.0%
TGGGGGGTCCTTACTTAACA+AGG + chr2_2:60647950-60647969 None:intergenic 50.0%
GTTAAGTAAGGACCCCCCAT+TGG - chr2_2:60647951-60647970 Msa0261970:intron 50.0%
!! TCCAAGAGCATCTCCAATGG+GGG + chr2_2:60647967-60647986 None:intergenic 50.0%
!! CTCCAAGAGCATCTCCAATG+GGG + chr2_2:60647968-60647987 None:intergenic 50.0%
!! GCTCCAAGAGCATCTCCAAT+GGG + chr2_2:60647969-60647988 None:intergenic 50.0%
!! GTATTTTGGGCAAGGCTGCA+AGG - chr2_2:60648287-60648306 Msa0261970:intron 50.0%
TTAACAGTGTGCCTCCGATG+GGG + chr2_2:60648999-60649018 None:intergenic 50.0%
GTTAACAGTGTGCCTCCGAT+GGG + chr2_2:60649000-60649019 None:intergenic 50.0%
TGTTAACAGTGTGCCTCCGA+TGG + chr2_2:60649001-60649020 None:intergenic 50.0%
TGGAGAAGCCTGCATCCAAA+AGG - chr2_2:60649205-60649224 Msa0261970:intron 50.0%
GAGAAGGGAGAAGATCGAAG+TGG - chr2_2:60649889-60649908 Msa0261970:intron 50.0%
! TGATGGTTTGTCTGCCAAGG+AGG + chr2_2:60651660-60651679 None:intergenic 50.0%
! CAGTGATGGTTTGTCTGCCA+AGG + chr2_2:60651663-60651682 None:intergenic 50.0%
AACCGTAGTGCTAGTGCCAA+AGG - chr2_2:60651692-60651711 Msa0261970:five_prime_UTR 50.0%
CCGGATCTTGCACATTCTCT+AGG + chr2_2:60651760-60651779 None:intergenic 50.0%
AGAGAATGTGCAAGATCCGG+TGG - chr2_2:60651760-60651779 Msa0261970:five_prime_UTR 50.0%
GATCCGGTGGTAACTCTTTG+TGG - chr2_2:60651773-60651792 Msa0261970:five_prime_UTR 50.0%
CTTGTTCCACTGTATGGTCG+TGG - chr2_2:60651893-60651912 Msa0261970:five_prime_UTR 50.0%
! GTTTTGCCACGACCATACAG+TGG + chr2_2:60651902-60651921 None:intergenic 50.0%
GTTGTACCACCTAGACCACT+TGG - chr2_2:60651944-60651963 Msa0261970:five_prime_UTR 50.0%
GAAGAAGGACCAAGTGGTCT+AGG + chr2_2:60651956-60651975 None:intergenic 50.0%
GACCACTTGGTCCTTCTTCA+TGG - chr2_2:60651957-60651976 Msa0261970:five_prime_UTR 50.0%
! CTTGGACCAAGTGGTCTTGG+TGG + chr2_2:60645333-60645352 None:intergenic 55.0%
GTAGAGGACCCATCACCTAG+AGG + chr2_2:60645953-60645972 None:intergenic 55.0%
CTTTATTCTGGTGGGACCCC+TGG - chr2_2:60645972-60645991 Msa0261970:intron 55.0%
!!! GAGTCTTTTGGGTTGGGAGG+AGG - chr2_2:60646075-60646094 Msa0261970:intron 55.0%
!!! CTTTTGGGTTGGGAGGAGGA+TGG - chr2_2:60646079-60646098 Msa0261970:intron 55.0%
AGGATGGAGAGGCTTGCAAG+TGG - chr2_2:60646095-60646114 Msa0261970:intron 55.0%
! CATGGGAGGAGGAGCATGTA+GGG - chr2_2:60646134-60646153 Msa0261970:intron 55.0%
CAACTTTGTGCGGGTGGTTG+CGG - chr2_2:60646416-60646435 Msa0261970:intron 55.0%
! GGGTGGTTGCGGCTCTAATT+AGG - chr2_2:60646427-60646446 Msa0261970:intron 55.0%
AGTCCCCCAAGCACAACACA+AGG + chr2_2:60646903-60646922 None:intergenic 55.0%
TGTGTTGTGCTTGGGGGACT+CGG - chr2_2:60646903-60646922 Msa0261970:intron 55.0%
ATACCCTAGGCATAGGTCGG+GGG - chr2_2:60647130-60647149 Msa0261970:intron 55.0%
!! CCAAGAGCATCTCCAATGGG+GGG + chr2_2:60647966-60647985 None:intergenic 55.0%
!! GGCTCCAAGAGCATCTCCAA+TGG + chr2_2:60647970-60647989 None:intergenic 55.0%
CTGCGTGAGTTAACTCACGC+TGG + chr2_2:60648192-60648211 None:intergenic 55.0%
!! GCGCATGGGTATTTTGGGCA+AGG - chr2_2:60648279-60648298 Msa0261970:intron 55.0%
! AAGGCGCAAGCGAAAAGTGC+AGG - chr2_2:60648306-60648325 Msa0261970:intron 55.0%
! AGGCGCAAGCGAAAAGTGCA+GGG - chr2_2:60648307-60648326 Msa0261970:intron 55.0%
GGGCTTAAATTCCCCATCGG+AGG - chr2_2:60648985-60649004 Msa0261970:intron 55.0%
GAAGGACCAAGTGGTCTAGG+TGG + chr2_2:60651953-60651972 None:intergenic 55.0%
!! AGCAGAAGCACCACCAGCAC+AGG - chr2_2:60645407-60645426 Msa0261970:intron 60.0%
ATTCTGGTGGGACCCCTGGT+TGG - chr2_2:60645976-60645995 Msa0261970:intron 60.0%
AAGACTCCCCCCTCCAACCA+GGG + chr2_2:60645992-60646011 None:intergenic 60.0%
TAAGACTCCCCCCTCCAACC+AGG + chr2_2:60645993-60646012 None:intergenic 60.0%
GAGAGGCTTGCAAGTGGCGT+AGG - chr2_2:60646101-60646120 Msa0261970:intron 60.0%
! GCATGGGAGGAGGAGCATGT+AGG - chr2_2:60646133-60646152 Msa0261970:intron 60.0%
ACGTTGGAGAGGATGGCAGG+TGG - chr2_2:60646191-60646210 Msa0261970:intron 60.0%
!! GCTTGGGGGACTCGGTTTTG+TGG - chr2_2:60646911-60646930 Msa0261970:intron 60.0%
GTGGGACCCGTTAGTTACCC+AGG - chr2_2:60647837-60647856 Msa0261970:intron 60.0%
CCCCCCATTGGAGATGCTCT+TGG - chr2_2:60647963-60647982 Msa0261970:intron 60.0%
! CGCAAGCGAAAAGTGCAGGG+CGG - chr2_2:60648310-60648329 Msa0261970:intron 60.0%
ATTGGGGTGGGGGGTGAAGC+AGG + chr2_2:60643821-60643840 None:intergenic 65.0%
TGGTGGGACCCCTGGTTGGA+GGG - chr2_2:60645980-60645999 Msa0261970:intron 65.0%
AGACTCCCCCCTCCAACCAG+GGG + chr2_2:60645991-60646010 None:intergenic 65.0%
GGGTTGGGAGGAGGATGGAG+AGG - chr2_2:60646084-60646103 Msa0261970:intron 65.0%
GCACCCCCGACCTATGCCTA+GGG + chr2_2:60647136-60647155 None:intergenic 65.0%
! CGCGAGCGAAAAGTGCAGGG+CGG + chr2_2:60647224-60647243 None:intergenic 65.0%
! GGGCGCGAGCGAAAAGTGCA+GGG + chr2_2:60647227-60647246 None:intergenic 65.0%
! AGGGCGCGAGCGAAAAGTGC+AGG + chr2_2:60647228-60647247 None:intergenic 65.0%
CTGGTGGGACCCCTGGTTGG+AGG - chr2_2:60645979-60645998 Msa0261970:intron 70.0%
GGTGGGACCCCTGGTTGGAG+GGG - chr2_2:60645981-60646000 Msa0261970:intron 70.0%
GTGGGACCCCTGGTTGGAGG+GGG - chr2_2:60645982-60646001 Msa0261970:intron 70.0%
TGGGACCCCTGGTTGGAGGG+GGG - chr2_2:60645983-60646002 Msa0261970:intron 70.0%
CGCACCCCCGACCTATGCCT+AGG + chr2_2:60647137-60647156 None:intergenic 70.0%
! GTCGGGGGTGCGACGACCTA+GGG - chr2_2:60647145-60647164 Msa0261970:intron 70.0%
! GGTCGGGGGTGCGACGACCT+AGG - chr2_2:60647144-60647163 Msa0261970:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 60643818 60651982 60643818 ID=Msa0261970;Name=Msa0261970
chr2_2 mRNA 60643818 60651982 60643818 ID=Msa0261970-mRNA-1;Parent=Msa0261970;Name=Msa0261970-mRNA-1;_AED=0.12;_eAED=0.12;_QI=655|0.5|0.33|1|0.5|0.33|3|0|250
chr2_2 exon 60643818 60644131 60643818 ID=Msa0261970-mRNA-1:exon:18644;Parent=Msa0261970-mRNA-1
chr2_2 exon 60650368 60650810 60650368 ID=Msa0261970-mRNA-1:exon:18643;Parent=Msa0261970-mRNA-1
chr2_2 exon 60651335 60651982 60651335 ID=Msa0261970-mRNA-1:exon:18642;Parent=Msa0261970-mRNA-1
chr2_2 five_prime_UTR 60651335 60651982 60651335 ID=Msa0261970-mRNA-1:five_prime_utr;Parent=Msa0261970-mRNA-1
chr2_2 five_prime_UTR 60650804 60650810 60650804 ID=Msa0261970-mRNA-1:five_prime_utr;Parent=Msa0261970-mRNA-1
chr2_2 CDS 60650368 60650803 60650368 ID=Msa0261970-mRNA-1:cds;Parent=Msa0261970-mRNA-1
chr2_2 CDS 60643818 60644131 60643818 ID=Msa0261970-mRNA-1:cds;Parent=Msa0261970-mRNA-1
Gene Sequence

>Msa0261970

ATGCTAGTGCTAATGGACATTCTGTCGAACCGGGGCAAAGCTGATGCTAATGCTAATGCTAATGCAGATTCTAATAAAATCTGTTCTAATGATTTTGAATGCAACATATGTTTGGAGCATGTGAAAGATCCAGTGGTAACACTTTGTGGTCATCTCTATTGTTGGCCTTGTATTTACAAATGGATTAATAGCACCTCATGGGAACATAATGAGAAACCAGAATGTCCAATATGCAAATCAGAAATTTCAGAATCAACACTTGTTCCACTATATGGTCGTGGTGAAACCACATCAAGTTCTGAAGGTGAGGCTCATCAAGATGGGAATGTTGTACCACCAAGACCACTTGGTCCAAGATCACTTGATACTGCAACTGTTTCACAACCTGAACTAGAACAAGCAGAAGCAGAAGCAGAAGCACCACCAGCACAGGAGAACAAACCATCACTGAAAACGATGAACCGTAGTGCTAGTGCCAAAGGTTCCAACAGAAGTTGTTCTAGTGGCTTTGACTGCAACATATGCCTAGAGAATGTGCAAGATCCGGTGGTAACTCTTTGTGGTCATCTTTATTGTTGGCCCTGCATTTACAAATGGTTGAATACTCGTAATAAAAAATCACAATGCCCAGTATGCAAATTAGAAATTTCAGAATCAACTCTTGTTCCACTGTATGGTCGTGGCAAAACAACATCAACTTCTAAAGGAATTGTTGTACCACCTAGACCACTTGGTCCTTCTTCATGGTTG

Protein sequence

>Msa0261970

MLVLMDILSNRGKADANANANADSNKICSNDFECNICLEHVKDPVVTLCGHLYCWPCIYKWINSTSWEHNEKPECPICKSEISESTLVPLYGRGETTSSSEGEAHQDGNVVPPRPLGPRSLDTATVSQPELEQAEAEAEAPPAQENKPSLKTMNRSASAKGSNRSCSSGFDCNICLENVQDPVVTLCGHLYCWPCIYKWLNTRNKKSQCPVCKLEISESTLVPLYGRGKTTSTSKGIVVPPRPLGPSSWL