Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1378460 | XP_003605778.1 | 63.380 | 71 | 21 | 1 | 3 | 68 | 2 | 72 | 7.97e-22 | 91.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1378460 | B7FMD2 | 63.380 | 71 | 21 | 1 | 3 | 68 | 2 | 72 | 3.81e-22 | 91.7 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa1378460 | 0.819425 | 1.169551e-52 | -8.615850e-47 |
| Msa0008850 | Msa1378460 | 0.802205 | 6.265655e-49 | -8.615850e-47 |
| Msa0014410 | Msa1378460 | 0.825127 | 5.552229e-54 | -8.615850e-47 |
| Msa0020630 | Msa1378460 | 0.842935 | 1.907780e-58 | -8.615850e-47 |
| Msa0038310 | Msa1378460 | 0.804860 | 1.763536e-49 | -8.615850e-47 |
| Msa0043940 | Msa1378460 | 0.843360 | 1.470103e-58 | -8.615850e-47 |
| Msa0044710 | Msa1378460 | 0.835234 | 1.888856e-56 | -8.615850e-47 |
| Msa0050720 | Msa1378460 | 0.825740 | 3.975965e-54 | -8.615850e-47 |
| Msa0050770 | Msa1378460 | 0.822271 | 2.590235e-53 | -8.615850e-47 |
| Msa0064550 | Msa1378460 | 0.845530 | 3.834481e-59 | -8.615850e-47 |
| Msa0068410 | Msa1378460 | 0.819825 | 9.475696e-53 | -8.615850e-47 |
| Msa0079770 | Msa1378460 | 0.808895 | 2.473717e-50 | -8.615850e-47 |
| Msa0084680 | Msa1378460 | 0.816273 | 6.021664e-52 | -8.615850e-47 |
| Msa0092710 | Msa1378460 | 0.832346 | 9.963687e-56 | -8.615850e-47 |
| Msa0101060 | Msa1378460 | 0.803894 | 2.802971e-49 | -8.615850e-47 |
| Msa0104290 | Msa1378460 | 0.801182 | 1.016078e-48 | -8.615850e-47 |
| Msa0109490 | Msa1378460 | 0.843163 | 1.658587e-58 | -8.615850e-47 |
| Msa0114250 | Msa1378460 | 0.828380 | 9.283759e-55 | -8.615850e-47 |
| Msa1354090 | Msa1378460 | 0.816043 | 6.776910e-52 | -8.615850e-47 |
| Msa1361190 | Msa1378460 | 0.840767 | 7.131964e-58 | -8.615850e-47 |
| Msa1378460 | Msa1378470 | 0.911902 | 3.591921e-83 | -8.615850e-47 |
| Msa1378460 | Msa1391490 | 0.816044 | 6.772945e-52 | -8.615850e-47 |
| Msa1378460 | Msa1397970 | 0.826148 | 3.179318e-54 | -8.615850e-47 |
| Msa1378460 | Msa1398800 | 0.816186 | 6.297912e-52 | -8.615850e-47 |
| Msa1378460 | Msa1418200 | 0.809246 | 2.080826e-50 | -8.615850e-47 |
| Msa1378460 | Msa1421870 | 0.830362 | 3.065064e-55 | -8.615850e-47 |
| Msa1378460 | Msa1422890 | 0.843514 | 1.337155e-58 | -8.615850e-47 |
| Msa1378460 | Msa1427830 | 0.821737 | 3.444028e-53 | -8.615850e-47 |
| Msa1378460 | Msa1431730 | 0.810139 | 1.337175e-50 | -8.615850e-47 |
| Msa1378460 | Msa1434660 | 0.808171 | 3.531370e-50 | -8.615850e-47 |
| Msa1378460 | Msa1439120 | 0.843865 | 1.077530e-58 | -8.615850e-47 |
| Msa1378460 | Msa1440220 | 0.839281 | 1.740134e-57 | -8.615850e-47 |
| Msa1378460 | Msa1440610 | 0.823698 | 1.204165e-53 | -8.615850e-47 |
| Msa1378460 | Msa1450020 | 0.806643 | 7.447665e-50 | -8.615850e-47 |
| Msa1378460 | Msa1454110 | 0.820020 | 8.551269e-53 | -8.615850e-47 |
| Msa1378460 | Msa1455660 | 0.844837 | 5.902379e-59 | -8.615850e-47 |
| Msa0607200 | Msa1378460 | 0.801701 | 7.952338e-49 | -8.615850e-47 |
| Msa0618520 | Msa1378460 | 0.825376 | 4.848897e-54 | -8.615850e-47 |
| Msa0620640 | Msa1378460 | 0.808389 | 3.171840e-50 | -8.615850e-47 |
| Msa0628100 | Msa1378460 | 0.839758 | 1.308048e-57 | -8.615850e-47 |
| Msa0642180 | Msa1378460 | 0.802737 | 4.867502e-49 | -8.615850e-47 |
| Msa0647000 | Msa1378460 | 0.803040 | 4.214278e-49 | -8.615850e-47 |
| Msa0651400 | Msa1378460 | 0.845742 | 3.358478e-59 | -8.615850e-47 |
| Msa0656680 | Msa1378460 | 0.802006 | 6.883984e-49 | -8.615850e-47 |
| Msa0667970 | Msa1378460 | 0.802905 | 4.493106e-49 | -8.615850e-47 |
| Msa0676100 | Msa1378460 | 0.920305 | 1.513233e-87 | -8.615850e-47 |
| Msa0704220 | Msa1378460 | 0.803301 | 3.721931e-49 | -8.615850e-47 |
| Msa0705420 | Msa1378460 | 0.811296 | 7.514771e-51 | -8.615850e-47 |
| Msa0714600 | Msa1378460 | 0.818030 | 2.424500e-52 | -8.615850e-47 |
| Msa0734660 | Msa1378460 | 0.841367 | 4.960711e-58 | -8.615850e-47 |
| Msa0743640 | Msa1378460 | 0.803023 | 4.248709e-49 | -8.615850e-47 |
| Msa0750380 | Msa1378460 | 0.817661 | 2.937700e-52 | -8.615850e-47 |
| Msa0755090 | Msa1378460 | 0.814967 | 1.176552e-51 | -8.615850e-47 |
| Msa0760890 | Msa1378460 | 0.833248 | 5.947743e-56 | -8.615850e-47 |
| Msa0769830 | Msa1378460 | 0.805233 | 1.473883e-49 | -8.615850e-47 |
| Msa0776220 | Msa1378460 | 0.845258 | 4.542705e-59 | -8.615850e-47 |
| Msa0787720 | Msa1378460 | 0.803257 | 3.799905e-49 | -8.615850e-47 |
| Msa0802210 | Msa1378460 | 0.802826 | 4.665035e-49 | -8.615850e-47 |
| Msa0804120 | Msa1378460 | 0.837895 | 3.968619e-57 | -8.615850e-47 |
| Msa0806720 | Msa1378460 | 0.811332 | 7.380172e-51 | -8.615850e-47 |
| Msa0806760 | Msa1378460 | 0.821530 | 3.844368e-53 | -8.615850e-47 |
| Msa0811510 | Msa1378460 | 0.800509 | 1.394061e-48 | -8.615850e-47 |
| Msa0813670 | Msa1378460 | 0.831366 | 1.738584e-55 | -8.615850e-47 |
| Msa0828570 | Msa1378460 | 0.855891 | 4.651355e-62 | -8.615850e-47 |
| Msa0830720 | Msa1378460 | 0.816237 | 6.134336e-52 | -8.615850e-47 |
| Msa0834460 | Msa1378460 | 0.810774 | 9.751383e-51 | -8.615850e-47 |
| Msa0127440 | Msa1378460 | 0.810866 | 9.315237e-51 | -8.615850e-47 |
| Msa0142420 | Msa1378460 | 0.814712 | 1.339934e-51 | -8.615850e-47 |
| Msa0154240 | Msa1378460 | 0.837221 | 5.907762e-57 | -8.615850e-47 |
| Msa0154270 | Msa1378460 | 0.809016 | 2.330046e-50 | -8.615850e-47 |
| Msa0155610 | Msa1378460 | 0.868352 | 6.959707e-66 | -8.615850e-47 |
| Msa0159750 | Msa1378460 | 0.843634 | 1.242100e-58 | -8.615850e-47 |
| Msa0182640 | Msa1378460 | 0.832556 | 8.835531e-56 | -8.615850e-47 |
| Msa0182930 | Msa1378460 | 0.831792 | 1.365499e-55 | -8.615850e-47 |
| Msa0183560 | Msa1378460 | 0.802600 | 5.193928e-49 | -8.615850e-47 |
| Msa0193760 | Msa1378460 | 0.809346 | 1.980304e-50 | -8.615850e-47 |
| Msa0198440 | Msa1378460 | 0.802948 | 4.402323e-49 | -8.615850e-47 |
| Msa0199730 | Msa1378460 | 0.816722 | 4.776766e-52 | -8.615850e-47 |
| Msa0208630 | Msa1378460 | 0.805410 | 1.353130e-49 | -8.615850e-47 |
| Msa0213080 | Msa1378460 | 0.801216 | 9.998006e-49 | -8.615850e-47 |
| Msa0216210 | Msa1378460 | 0.825512 | 4.502080e-54 | -8.615850e-47 |
| Msa0222660 | Msa1378460 | 0.821246 | 4.470326e-53 | -8.615850e-47 |
| Msa0235550 | Msa1378460 | 0.816396 | 5.651729e-52 | -8.615850e-47 |
| Msa1238730 | Msa1378460 | 0.806565 | 7.733726e-50 | -8.615850e-47 |
| Msa1241820 | Msa1378460 | 0.809250 | 2.076721e-50 | -8.615850e-47 |
| Msa1282920 | Msa1378460 | 0.805583 | 1.244807e-49 | -8.615850e-47 |
| Msa1293050 | Msa1378460 | 0.813774 | 2.158915e-51 | -8.615850e-47 |
| Msa1306190 | Msa1378460 | 0.842783 | 2.094066e-58 | -8.615850e-47 |
| Msa1306200 | Msa1378460 | 0.843752 | 1.155169e-58 | -8.615850e-47 |
| Msa1317030 | Msa1378460 | 0.812837 | 3.467633e-51 | -8.615850e-47 |
| Msa1320380 | Msa1378460 | 0.807644 | 4.571372e-50 | -8.615850e-47 |
| Msa1326400 | Msa1378460 | 0.803367 | 3.606731e-49 | -8.615850e-47 |
| Msa1335970 | Msa1378460 | -0.801593 | 8.367715e-49 | -8.615850e-47 |
| Msa0366870 | Msa1378460 | 0.834814 | 2.411427e-56 | -8.615850e-47 |
| Msa0371070 | Msa1378460 | 0.811025 | 8.604747e-51 | -8.615850e-47 |
| Msa0377280 | Msa1378460 | 0.830203 | 3.351162e-55 | -8.615850e-47 |
| Msa0380040 | Msa1378460 | 0.803295 | 3.732108e-49 | -8.615850e-47 |
| Msa0382590 | Msa1378460 | 0.826287 | 2.947334e-54 | -8.615850e-47 |
| Msa0389060 | Msa1378460 | 0.818920 | 1.523346e-52 | -8.615850e-47 |
| Msa0392050 | Msa1378460 | 0.815170 | 1.060314e-51 | -8.615850e-47 |
| Msa0401340 | Msa1378460 | 0.844047 | 9.626244e-59 | -8.615850e-47 |
| Msa0404690 | Msa1378460 | 0.828931 | 6.832059e-55 | -8.615850e-47 |
| Msa0414780 | Msa1378460 | 0.825842 | 3.759223e-54 | -8.615850e-47 |
| Msa0418430 | Msa1378460 | 0.831636 | 1.492271e-55 | -8.615850e-47 |
| Msa0419990 | Msa1378460 | 0.802609 | 5.171889e-49 | -8.615850e-47 |
| Msa0421160 | Msa1378460 | 0.800296 | 1.540475e-48 | -8.615850e-47 |
| Msa0431520 | Msa1378460 | 0.822699 | 2.060135e-53 | -8.615850e-47 |
| Msa0431830 | Msa1378460 | 0.823982 | 1.032894e-53 | -8.615850e-47 |
| Msa0432720 | Msa1378460 | 0.818441 | 1.957580e-52 | -8.615850e-47 |
| Msa0448080 | Msa1378460 | 0.851943 | 6.384997e-61 | -8.615850e-47 |
| Msa0448120 | Msa1378460 | 0.860768 | 1.640506e-63 | -8.615850e-47 |
| Msa0462590 | Msa1378460 | 0.852296 | 5.066567e-61 | -8.615850e-47 |
| Msa0465800 | Msa1378460 | 0.835244 | 1.877962e-56 | -8.615850e-47 |
| Msa0469950 | Msa1378460 | 0.815652 | 8.285214e-52 | -8.615850e-47 |
| Msa0472740 | Msa1378460 | 0.862494 | 4.869876e-64 | -8.615850e-47 |
| Msa0473530 | Msa1378460 | 0.829105 | 6.199729e-55 | -8.615850e-47 |
| Msa0475580 | Msa1378460 | 0.803383 | 3.578686e-49 | -8.615850e-47 |
| Msa0984000 | Msa1378460 | 0.830984 | 2.158494e-55 | -8.615850e-47 |
| Msa1004210 | Msa1378460 | 0.862830 | 3.837834e-64 | -8.615850e-47 |
| Msa1014350 | Msa1378460 | 0.821361 | 4.206057e-53 | -8.615850e-47 |
| Msa1046610 | Msa1378460 | 0.864070 | 1.583501e-64 | -8.615850e-47 |
| Msa1055360 | Msa1378460 | 0.827094 | 1.891001e-54 | -8.615850e-47 |
| Msa1093390 | Msa1378460 | 0.823869 | 1.097654e-53 | -8.615850e-47 |
| Msa1102540 | Msa1378460 | 0.802616 | 5.154732e-49 | -8.615850e-47 |
| Msa0240780 | Msa1378460 | 0.805002 | 1.646958e-49 | -8.615850e-47 |
| Msa0242290 | Msa1378460 | 0.808689 | 2.737390e-50 | -8.615850e-47 |
| Msa0260190 | Msa1378460 | 0.819261 | 1.274620e-52 | -8.615850e-47 |
| Msa0261970 | Msa1378460 | 0.801288 | 9.664148e-49 | -8.615850e-47 |
| Msa0264050 | Msa1378460 | 0.818002 | 2.460125e-52 | -8.615850e-47 |
| Msa0265580 | Msa1378460 | 0.824030 | 1.006491e-53 | -8.615850e-47 |
| Msa0274520 | Msa1378460 | 0.802719 | 4.908555e-49 | -8.615850e-47 |
| Msa0280490 | Msa1378460 | 0.823921 | 1.067431e-53 | -8.615850e-47 |
| Msa0282170 | Msa1378460 | 0.816815 | 4.551769e-52 | -8.615850e-47 |
| Msa0284780 | Msa1378460 | 0.802510 | 5.420854e-49 | -8.615850e-47 |
| Msa0298830 | Msa1378460 | 0.800847 | 1.189521e-48 | -8.615850e-47 |
| Msa0299790 | Msa1378460 | 0.813520 | 2.455575e-51 | -8.615850e-47 |
| Msa0301980 | Msa1378460 | 0.806340 | 8.628455e-50 | -8.615850e-47 |
| Msa0303440 | Msa1378460 | 0.814436 | 1.542183e-51 | -8.615850e-47 |
| Msa0318250 | Msa1378460 | 0.821647 | 3.613540e-53 | -8.615850e-47 |
| Msa0318270 | Msa1378460 | 0.840338 | 9.237363e-58 | -8.615850e-47 |
| Msa0318310 | Msa1378460 | 0.840730 | 7.293607e-58 | -8.615850e-47 |
| Msa0326670 | Msa1378460 | 0.807976 | 3.885058e-50 | -8.615850e-47 |
| Msa0339310 | Msa1378460 | 0.801878 | 7.313160e-49 | -8.615850e-47 |
| Msa0344680 | Msa1378460 | 0.812080 | 5.074423e-51 | -8.615850e-47 |
| Msa0354390 | Msa1378460 | 0.847395 | 1.188562e-59 | -8.615850e-47 |
| Msa0357380 | Msa1378460 | 0.859706 | 3.436387e-63 | -8.615850e-47 |
| Msa0357390 | Msa1378460 | 0.870436 | 1.461706e-66 | -8.615850e-47 |
| Msa0358290 | Msa1378460 | 0.824848 | 6.462702e-54 | -8.615850e-47 |
| Msa1111630 | Msa1378460 | 0.815436 | 9.252978e-52 | -8.615850e-47 |
| Msa1144730 | Msa1378460 | 0.815440 | 9.235559e-52 | -8.615850e-47 |
| Msa1157730 | Msa1378460 | 0.833021 | 6.775748e-56 | -8.615850e-47 |
| Msa1159360 | Msa1378460 | 0.801565 | 8.481157e-49 | -8.615850e-47 |
| Msa1167170 | Msa1378460 | 0.808930 | 2.431819e-50 | -8.615850e-47 |
| Msa1177240 | Msa1378460 | 0.813905 | 2.019864e-51 | -8.615850e-47 |
| Msa1182830 | Msa1378460 | 0.838761 | 2.372772e-57 | -8.615850e-47 |
| Msa1187520 | Msa1378460 | 0.810379 | 1.186748e-50 | -8.615850e-47 |
| Msa0486530 | Msa1378460 | 0.800213 | 1.601602e-48 | -8.615850e-47 |
| Msa0525270 | Msa1378460 | 0.810149 | 1.330768e-50 | -8.615850e-47 |
| Msa0530930 | Msa1378460 | 0.808055 | 3.737969e-50 | -8.615850e-47 |
| Msa0530950 | Msa1378460 | 0.837684 | 4.493916e-57 | -8.615850e-47 |
| Msa0532840 | Msa1378460 | 0.801943 | 7.092625e-49 | -8.615850e-47 |
| Msa0533010 | Msa1378460 | 0.803001 | 4.292419e-49 | -8.615850e-47 |
| Msa0568610 | Msa1378460 | 0.823194 | 1.579352e-53 | -8.615850e-47 |
| Msa0577230 | Msa1378460 | 0.815867 | 7.418574e-52 | -8.615850e-47 |
| Msa0579340 | Msa1378460 | 0.800725 | 1.259465e-48 | -8.615850e-47 |
| Msa0583740 | Msa1378460 | 0.810147 | 1.331666e-50 | -8.615850e-47 |
| Msa0583790 | Msa1378460 | 0.813873 | 2.053558e-51 | -8.615850e-47 |
| Msa0584280 | Msa1378460 | 0.818763 | 1.654355e-52 | -8.615850e-47 |
| Msa0593810 | Msa1378460 | 0.810142 | 1.335365e-50 | -8.615850e-47 |
| Msa0600820 | Msa1378460 | 0.819659 | 1.033821e-52 | -8.615850e-47 |
| Msa0847200 | Msa1378460 | 0.803061 | 4.171717e-49 | -8.615850e-47 |
| Msa0848380 | Msa1378460 | 0.808329 | 3.267877e-50 | -8.615850e-47 |
| Msa0851740 | Msa1378460 | 0.800731 | 1.256238e-48 | -8.615850e-47 |
| Msa0853480 | Msa1378460 | 0.807439 | 5.050930e-50 | -8.615850e-47 |
| Msa0854120 | Msa1378460 | 0.814784 | 1.291747e-51 | -8.615850e-47 |
| Msa0863760 | Msa1378460 | 0.800644 | 1.308224e-48 | -8.615850e-47 |
| Msa0903730 | Msa1378460 | 0.803125 | 4.047131e-49 | -8.615850e-47 |
| Msa0909710 | Msa1378460 | 0.800679 | 1.286915e-48 | -8.615850e-47 |
| Msa0945960 | Msa1378460 | 0.821266 | 4.424213e-53 | -8.615850e-47 |
| Msa0950620 | Msa1378460 | 0.805433 | 1.337925e-49 | -8.615850e-47 |
| Msa0964680 | Msa1378460 | 0.825400 | 4.785100e-54 | -8.615850e-47 |
| Msa0971860 | Msa1378460 | 0.817179 | 3.770706e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1378460 | MtrunA17_Chr4g0019521 | 63.380 | 71 | 21 | 1 | 3 | 68 | 2 | 72 | 7.33e-26 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 15 sgRNAs with CRISPR-Local
Find 18 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCACTCTTGGTATAGAATT+AGG | 0.267818 | tig0020061:+50278 | Msa1378460:CDS |
| CTTCTACCTTGGCAAGATAA+TGG | 0.344639 | tig0020061:-50313 | None:intergenic |
| GTATAGAATTAGGACCCCTT+TGG | 0.412469 | tig0020061:+50288 | Msa1378460:CDS |
| CACTCACCATTAGCCACTCT+TGG | 0.472156 | tig0020061:+50266 | Msa1378460:CDS |
| AAGAAAGACATAGGAGGAAG+AGG | 0.481981 | tig0020061:+50367 | Msa1378460:CDS |
| AGATGCATGGTCTTCTACCT+TGG | 0.492293 | tig0020061:-50324 | None:intergenic |
| TCTATACCAAGAGTGGCTAA+TGG | 0.502607 | tig0020061:-50272 | None:intergenic |
| GGCAAGATAATGGAACCAAA+GGG | 0.513637 | tig0020061:-50303 | None:intergenic |
| TTGGTTCCATTATCTTGCCA+AGG | 0.539176 | tig0020061:+50307 | Msa1378460:CDS |
| CATGAAGAAAAGAAAGACAT+AGG | 0.556728 | tig0020061:+50358 | Msa1378460:CDS |
| TGGCAAGATAATGGAACCAA+AGG | 0.571857 | tig0020061:-50304 | None:intergenic |
| TCCTAATTCTATACCAAGAG+TGG | 0.590163 | tig0020061:-50279 | None:intergenic |
| TGATTGGAGTTAGAGATGCA+TGG | 0.614307 | tig0020061:-50337 | None:intergenic |
| GAAGAAAAGAAAGACATAGG+AGG | 0.619275 | tig0020061:+50361 | Msa1378460:CDS |
| GCAAGATAATGGAACCAAAG+GGG | 0.711481 | tig0020061:-50302 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GTCTTTCTTTTCTTCATGAT+TGG | - | tig0020061:50356-50375 | None:intergenic | 30.0% |
| CATGAAGAAAAGAAAGACAT+AGG | + | tig0020061:50358-50377 | Msa1378460:CDS | 30.0% | |
| TCCTAATTCTATACCAAGAG+TGG | - | tig0020061:50282-50301 | None:intergenic | 35.0% | |
| GAAGAAAAGAAAGACATAGG+AGG | + | tig0020061:50361-50380 | Msa1378460:CDS | 35.0% | |
| TCTATACCAAGAGTGGCTAA+TGG | - | tig0020061:50275-50294 | None:intergenic | 40.0% | |
| GCCACTCTTGGTATAGAATT+AGG | + | tig0020061:50278-50297 | Msa1378460:CDS | 40.0% | |
| GTATAGAATTAGGACCCCTT+TGG | + | tig0020061:50288-50307 | Msa1378460:CDS | 40.0% | |
| !! | GCAAGATAATGGAACCAAAG+GGG | - | tig0020061:50305-50324 | None:intergenic | 40.0% |
| !! | GGCAAGATAATGGAACCAAA+GGG | - | tig0020061:50306-50325 | None:intergenic | 40.0% |
| !! | TGGCAAGATAATGGAACCAA+AGG | - | tig0020061:50307-50326 | None:intergenic | 40.0% |
| TTGGTTCCATTATCTTGCCA+AGG | + | tig0020061:50307-50326 | Msa1378460:CDS | 40.0% | |
| CTTCTACCTTGGCAAGATAA+TGG | - | tig0020061:50316-50335 | None:intergenic | 40.0% | |
| TGATTGGAGTTAGAGATGCA+TGG | - | tig0020061:50340-50359 | None:intergenic | 40.0% | |
| AAGAAAGACATAGGAGGAAG+AGG | + | tig0020061:50367-50386 | Msa1378460:CDS | 40.0% | |
| !!! | TGAAAAGCACTTTTCGCATC+AGG | + | tig0020061:50423-50442 | Msa1378460:CDS | 40.0% |
| AGATGCATGGTCTTCTACCT+TGG | - | tig0020061:50327-50346 | None:intergenic | 45.0% | |
| !! | AAAGCACTTTTCGCATCAGG+TGG | + | tig0020061:50426-50445 | Msa1378460:CDS | 45.0% |
| CACTCACCATTAGCCACTCT+TGG | + | tig0020061:50266-50285 | Msa1378460:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020061 | gene | 50259 | 50465 | 50259 | ID=Msa1378460;Name=Msa1378460 |
| tig0020061 | mRNA | 50259 | 50465 | 50259 | ID=Msa1378460-mRNA-1;Parent=Msa1378460;Name=Msa1378460-mRNA-1;_AED=0.54;_eAED=0.55;_QI=0|-1|0|1|-1|1|1|0|68 |
| tig0020061 | exon | 50259 | 50465 | 50259 | ID=Msa1378460-mRNA-1:exon:6068;Parent=Msa1378460-mRNA-1 |
| tig0020061 | CDS | 50259 | 50465 | 50259 | ID=Msa1378460-mRNA-1:cds;Parent=Msa1378460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
