Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284740 | XP_013441671.1 | 96.117 | 206 | 8 | 0 | 1 | 206 | 1 | 206 | 1.58e-143 | 408 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284740 | sp|Q9ZUF7|LOR6_ARATH | 56.500 | 200 | 75 | 3 | 7 | 206 | 4 | 191 | 5.93e-76 | 229 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284740 | G7IGE6 | 96.117 | 206 | 8 | 0 | 1 | 206 | 1 | 206 | 7.53e-144 | 408 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017320 | Msa0284740 | 0.802865 | 4.580528e-49 | -8.615850e-47 |
| Msa0026430 | Msa0284740 | 0.801777 | 7.672856e-49 | -8.615850e-47 |
| Msa0051630 | Msa0284740 | 0.811413 | 7.088019e-51 | -8.615850e-47 |
| Msa0051740 | Msa0284740 | 0.815327 | 9.784127e-52 | -8.615850e-47 |
| Msa0054820 | Msa0284740 | 0.818405 | 1.993672e-52 | -8.615850e-47 |
| Msa0074750 | Msa0284740 | 0.800283 | 1.549612e-48 | -8.615850e-47 |
| Msa0081650 | Msa0284740 | 0.803086 | 4.122185e-49 | -8.615850e-47 |
| Msa0100160 | Msa0284740 | 0.809206 | 2.121739e-50 | -8.615850e-47 |
| Msa0174260 | Msa0284740 | 0.806924 | 6.495113e-50 | -8.615850e-47 |
| Msa0203040 | Msa0284740 | 0.937003 | 7.011675e-98 | -8.615850e-47 |
| Msa0218350 | Msa0284740 | 0.814091 | 1.838284e-51 | -8.615850e-47 |
| Msa0227230 | Msa0284740 | 0.800686 | 1.282751e-48 | -8.615850e-47 |
| Msa0246230 | Msa0284740 | 0.915235 | 7.490625e-85 | -8.615850e-47 |
| Msa0271790 | Msa0284740 | 0.800712 | 1.267147e-48 | -8.615850e-47 |
| Msa0284740 | Msa0303520 | 0.802563 | 5.286221e-49 | -8.615850e-47 |
| Msa0284740 | Msa0376910 | 0.801088 | 1.061819e-48 | -8.615850e-47 |
| Msa0284740 | Msa0377440 | 0.801577 | 8.431141e-49 | -8.615850e-47 |
| Msa0284740 | Msa0378970 | 0.800247 | 1.576030e-48 | -8.615850e-47 |
| Msa0284740 | Msa0387050 | 0.819476 | 1.138495e-52 | -8.615850e-47 |
| Msa0284740 | Msa0431210 | 0.801987 | 6.945241e-49 | -8.615850e-47 |
| Msa0284740 | Msa0471900 | 0.809523 | 1.814475e-50 | -8.615850e-47 |
| Msa0284740 | Msa0474940 | 0.806691 | 7.274231e-50 | -8.615850e-47 |
| Msa0284740 | Msa0559500 | 0.809530 | 1.807713e-50 | -8.615850e-47 |
| Msa0284740 | Msa0560500 | 0.807615 | 4.636047e-50 | -8.615850e-47 |
| Msa0284740 | Msa0621600 | 0.802639 | 5.100075e-49 | -8.615850e-47 |
| Msa0284740 | Msa0652690 | 0.800737 | 1.252517e-48 | -8.615850e-47 |
| Msa0284740 | Msa0658680 | 0.810145 | 1.333239e-50 | -8.615850e-47 |
| Msa0284740 | Msa0709160 | 0.828320 | 9.601517e-55 | -8.615850e-47 |
| Msa0284740 | Msa0732600 | 0.809087 | 2.249775e-50 | -8.615850e-47 |
| Msa0284740 | Msa0818890 | 0.818379 | 2.021541e-52 | -8.615850e-47 |
| Msa0284740 | Msa0866400 | 0.815525 | 8.839613e-52 | -8.615850e-47 |
| Msa0284740 | Msa0866410 | 0.805678 | 1.188711e-49 | -8.615850e-47 |
| Msa0284740 | Msa1063420 | 0.813395 | 2.616108e-51 | -8.615850e-47 |
| Msa0284740 | Msa1077070 | 0.827603 | 1.428253e-54 | -8.615850e-47 |
| Msa0284740 | Msa1098890 | 0.808714 | 2.703430e-50 | -8.615850e-47 |
| Msa0284740 | Msa1122780 | 0.821271 | 4.411435e-53 | -8.615850e-47 |
| Msa0284740 | Msa1127430 | 0.801333 | 9.459018e-49 | -8.615850e-47 |
| Msa0284740 | Msa1215070 | 0.803316 | 3.694809e-49 | -8.615850e-47 |
| Msa0284740 | Msa1264420 | 0.802567 | 5.276171e-49 | -8.615850e-47 |
| Msa0284740 | Msa1270660 | 0.826742 | 2.295708e-54 | -8.615850e-47 |
| Msa0284740 | Msa1270730 | 0.814238 | 1.705388e-51 | -8.615850e-47 |
| Msa0284740 | Msa1317770 | 0.802958 | 4.381230e-49 | -8.615850e-47 |
| Msa0284740 | Msa1336040 | 0.823522 | 1.323928e-53 | -8.615850e-47 |
| Msa0284740 | Msa1341490 | 0.809727 | 1.640532e-50 | -8.615850e-47 |
| Msa0284740 | Msa1359560 | 0.805279 | 1.441459e-49 | -8.615850e-47 |
| Msa0284740 | Msa1372290 | 0.802136 | 6.474337e-49 | -8.615850e-47 |
| Msa0284740 | Msa1376130 | 0.801808 | 7.561364e-49 | -8.615850e-47 |
| Msa0284740 | Msa1450720 | 0.800998 | 1.107757e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284740 | MtrunA17_Chr2g0300771 | 96.117 | 206 | 8 | 0 | 1 | 206 | 1 | 206 | 1.45e-147 | 408 |
| Msa0284740 | MtrunA17_Chr4g0003271 | 29.665 | 209 | 130 | 7 | 1 | 205 | 1 | 196 | 4.48e-22 | 89.4 |
| Msa0284740 | MtrunA17_Chr2g0333111 | 29.703 | 202 | 125 | 7 | 7 | 204 | 19 | 207 | 7.30e-17 | 75.9 |
| Msa0284740 | MtrunA17_Chr7g0244321 | 28.342 | 187 | 123 | 5 | 12 | 197 | 28 | 204 | 1.59e-16 | 74.7 |
| Msa0284740 | MtrunA17_Chr2g0333101 | 30.168 | 179 | 108 | 7 | 30 | 204 | 41 | 206 | 1.60e-15 | 72.4 |
| Msa0284740 | MtrunA17_Chr7g0244331 | 27.638 | 199 | 127 | 7 | 5 | 199 | 21 | 206 | 3.85e-15 | 71.2 |
| Msa0284740 | MtrunA17_Chr7g0244341 | 26.633 | 199 | 135 | 5 | 5 | 202 | 21 | 209 | 1.20e-14 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284740 | AT2G05910.1 | 56.500 | 200 | 75 | 3 | 7 | 206 | 4 | 191 | 6.02e-77 | 229 |
| Msa0284740 | AT5G20640.1 | 50.000 | 208 | 98 | 4 | 4 | 206 | 9 | 215 | 5.52e-69 | 210 |
| Msa0284740 | AT3G15810.1 | 27.861 | 201 | 126 | 7 | 7 | 203 | 20 | 205 | 2.06e-16 | 75.1 |
| Msa0284740 | AT1G80120.1 | 26.108 | 203 | 128 | 8 | 7 | 202 | 6 | 193 | 5.00e-11 | 60.1 |
Find 57 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTACACTTGACTACATTTA+TGG | 0.127172 | 2_3:+23340896 | Msa0284740:CDS |
| AACAAGGATTTCAAGCTTCT+TGG | 0.214724 | 2_3:-23339106 | None:intergenic |
| AGGCTGGGACTTTGAGATTA+GGG | 0.292979 | 2_3:+23339913 | Msa0284740:CDS |
| TATTTGAGCCAATATTATAT+TGG | 0.315483 | 2_3:-23340999 | None:intergenic |
| ACAATGCTGCAATGCTTGTC+AGG | 0.358681 | 2_3:-23339944 | None:intergenic |
| TTAACCAAACATGAATTTCC+AGG | 0.375687 | 2_3:-23339842 | None:intergenic |
| TGGTTAAGAACAAAGGAATC+AGG | 0.379875 | 2_3:+23339858 | Msa0284740:CDS |
| ATGTATTAACTAATATGAAA+TGG | 0.399378 | 2_3:-23339017 | None:intergenic |
| ATATCATGTAGTTGTGAAAC+CGG | 0.408825 | 2_3:+23340841 | Msa0284740:CDS |
| AGAACCTGGAAATTCATGTT+TGG | 0.410797 | 2_3:+23339838 | Msa0284740:CDS |
| AAGGCTGGGACTTTGAGATT+AGG | 0.425248 | 2_3:+23339912 | Msa0284740:CDS |
| TTCGTCGTCGCAGACGGTGT+TGG | 0.426654 | 2_3:+23339242 | Msa0284740:CDS |
| TCGTCGTCGCAGACGGTGTT+GGG | 0.426913 | 2_3:+23339243 | Msa0284740:CDS |
| CGGTGTTGGGTGTGAGGAAA+AGG | 0.429005 | 2_3:+23339256 | Msa0284740:CDS |
| GTTGATGGTTGTGGAATTCA+TGG | 0.436790 | 2_3:+23339345 | Msa0284740:CDS |
| TTGGATTAATTAGCAATATG+TGG | 0.437205 | 2_3:-23340924 | None:intergenic |
| GTAAAGCATGCAGCTACATA+TGG | 0.441907 | 2_3:+23341051 | Msa0284740:three_prime_UTR |
| ATGCTAGCTCTTCACAACTT+TGG | 0.447246 | 2_3:-23340943 | None:intergenic |
| GAAGAGTTGATTCTAAGAGA+TGG | 0.449712 | 2_3:+23339375 | Msa0284740:CDS |
| ATCAGGATTGCAATTGAGCC+AGG | 0.456564 | 2_3:+23339875 | Msa0284740:CDS |
| GGGCTGTTAGTAACAAAGGC+TGG | 0.459412 | 2_3:+23339897 | Msa0284740:CDS |
| TTTGCTTCTCATGCGTAGAA+AGG | 0.475993 | 2_3:+23339410 | Msa0284740:CDS |
| CTCTAAGCATTTATAAGAAG+TGG | 0.485897 | 2_3:+23339762 | Msa0284740:CDS |
| TGAAAATGTGCAGGGAGGTA+TGG | 0.497953 | 2_3:+23339733 | Msa0284740:intron |
| GGTTATAGTGTAAACTATGA+AGG | 0.510131 | 2_3:+23339788 | Msa0284740:CDS |
| CACTGATTGTAGGACTCAAA+AGG | 0.512818 | 2_3:+23339311 | Msa0284740:CDS |
| CTATTGTTCGTCGTCGCAGA+CGG | 0.514860 | 2_3:+23339236 | Msa0284740:CDS |
| CCTTTGTTACTAACAGCCCC+TGG | 0.527858 | 2_3:-23339893 | None:intergenic |
| GGCTGTTAGTAACAAAGGCT+GGG | 0.537091 | 2_3:+23339898 | Msa0284740:CDS |
| CAATAGAGTTTACTAACGAT+TGG | 0.539463 | 2_3:-23339219 | None:intergenic |
| CGCAGACGGTGTTGGGTGTG+AGG | 0.540715 | 2_3:+23339250 | Msa0284740:CDS |
| AGCATTTATAAGAAGTGGAA+AGG | 0.545640 | 2_3:+23339767 | Msa0284740:CDS |
| TCATGTTTGGTTAAGAACAA+AGG | 0.548192 | 2_3:+23339851 | Msa0284740:CDS |
| TATCATGTAGTTGTGAAACC+GGG | 0.550855 | 2_3:+23340842 | Msa0284740:CDS |
| TAAAGCATGCAGCTACATAT+GGG | 0.562539 | 2_3:+23341052 | Msa0284740:three_prime_UTR |
| CCACATGTAGTGAGTGGTGG+TGG | 0.563567 | 2_3:+23339279 | Msa0284740:CDS |
| GTATTCAGCTTAAAAGAACC+TGG | 0.563706 | 2_3:+23339824 | Msa0284740:CDS |
| TGTAGTTGTGAAACCGGGGA+TGG | 0.571453 | 2_3:+23340847 | Msa0284740:CDS |
| CCAGGGGCTGTTAGTAACAA+AGG | 0.575524 | 2_3:+23339893 | Msa0284740:CDS |
| GGCTGGGACTTTGAGATTAG+GGG | 0.576442 | 2_3:+23339914 | Msa0284740:CDS |
| ACAAAAGCTTGATCCATCCC+CGG | 0.577739 | 2_3:-23340860 | None:intergenic |
| TAGAGGCAACATAGTAGCAC+AGG | 0.581579 | 2_3:+23339973 | Msa0284740:CDS |
| CAACTTTCAACTAAGTAACA+AGG | 0.585279 | 2_3:-23339157 | None:intergenic |
| GGAGAAATTGATAGAAAACA+AGG | 0.587852 | 2_3:+23340814 | Msa0284740:CDS |
| TGCAGCATTGTTGATACTAG+AGG | 0.590465 | 2_3:+23339956 | Msa0284740:CDS |
| CAATGCTGCAATGCTTGTCA+GGG | 0.592241 | 2_3:-23339943 | None:intergenic |
| ATATGCATCAATGTGATGGT+AGG | 0.594293 | 2_3:-23341028 | None:intergenic |
| GGTTGGGATAAATAAAGAAG+TGG | 0.595544 | 2_3:+23340793 | Msa0284740:intron |
| TCAGGATTGCAATTGAGCCA+GGG | 0.612778 | 2_3:+23339876 | Msa0284740:CDS |
| CAGGATTGCAATTGAGCCAG+GGG | 0.617829 | 2_3:+23339877 | Msa0284740:CDS |
| CCACCACCACTCACTACATG+TGG | 0.632877 | 2_3:-23339279 | None:intergenic |
| TTACATATGCATCAATGTGA+TGG | 0.645562 | 2_3:-23341032 | None:intergenic |
| TGTGCAGGGAGGTATGGTTG+AGG | 0.645663 | 2_3:+23339739 | Msa0284740:intron |
| AAAAGGCCACATGTAGTGAG+TGG | 0.660839 | 2_3:+23339273 | Msa0284740:CDS |
| TTGATGGTTGTGGAATTCAT+GGG | 0.667824 | 2_3:+23339346 | Msa0284740:CDS |
| ATCATGTAGTTGTGAAACCG+GGG | 0.679432 | 2_3:+23340843 | Msa0284740:CDS |
| AGGCCACATGTAGTGAGTGG+TGG | 0.689979 | 2_3:+23339276 | Msa0284740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTATACACATAAATATT+GGG | - | chr2_3:23340001-23340020 | None:intergenic | 10.0% |
| !! | ATTATTATACACATAAATAT+TGG | - | chr2_3:23340002-23340021 | None:intergenic | 10.0% |
| !! | TGTATATTAGTAAAAAATTA+CGG | - | chr2_3:23340090-23340109 | None:intergenic | 10.0% |
| !!! | TTTATAAGTAATTAGATTTT+TGG | + | chr2_3:23340296-23340315 | Msa0284740:intron | 10.0% |
| !! | TTATTATACACATAAATATT+GGG | - | chr2_3:23340001-23340020 | None:intergenic | 10.0% |
| !! | ATTATTATACACATAAATAT+TGG | - | chr2_3:23340002-23340021 | None:intergenic | 10.0% |
| !! | TGTATATTAGTAAAAAATTA+CGG | - | chr2_3:23340090-23340109 | None:intergenic | 10.0% |
| !!! | TTTATAAGTAATTAGATTTT+TGG | + | chr2_3:23340296-23340315 | Msa0284740:intron | 10.0% |
| !! | ATGTATTAACTAATATGAAA+TGG | - | chr2_3:23339020-23339039 | None:intergenic | 15.0% |
| !! | TCAACAAAAAAAATAAAACA+AGG | - | chr2_3:23339125-23339144 | None:intergenic | 15.0% |
| !!! | TTTCATTTTATATTGTGTAT+AGG | + | chr2_3:23339516-23339535 | Msa0284740:intron | 15.0% |
| !!! | AAAATTACACATTTTCAAAT+GGG | - | chr2_3:23340050-23340069 | None:intergenic | 15.0% |
| !! | ATGAAAAACCAATATAATAT+TGG | + | chr2_3:23340991-23341010 | Msa0284740:three_prime_UTR | 15.0% |
| !! | ATGTATTAACTAATATGAAA+TGG | - | chr2_3:23339020-23339039 | None:intergenic | 15.0% |
| !! | TCAACAAAAAAAATAAAACA+AGG | - | chr2_3:23339125-23339144 | None:intergenic | 15.0% |
| !!! | TTTCATTTTATATTGTGTAT+AGG | + | chr2_3:23339516-23339535 | Msa0284740:intron | 15.0% |
| !!! | AAAATTACACATTTTCAAAT+GGG | - | chr2_3:23340050-23340069 | None:intergenic | 15.0% |
| !! | ATGAAAAACCAATATAATAT+TGG | + | chr2_3:23340991-23341010 | Msa0284740:three_prime_UTR | 15.0% |
| !! | AAAGAATCAAAAGAGATATA+AGG | - | chr2_3:23339677-23339696 | None:intergenic | 20.0% |
| !!! | CAAAATTACACATTTTCAAA+TGG | - | chr2_3:23340051-23340070 | None:intergenic | 20.0% |
| !!! | GTTAGAAATCAATTCATTTT+CGG | - | chr2_3:23340593-23340612 | None:intergenic | 20.0% |
| !!! | CTACTTTTAATTAAACTTAG+TGG | - | chr2_3:23340644-23340663 | None:intergenic | 20.0% |
| !! | AAAAGTAGAAACTCATATAT+TGG | + | chr2_3:23340656-23340675 | Msa0284740:intron | 20.0% |
| !!! | TATGTTTTATCTTGATAGAA+TGG | - | chr2_3:23340730-23340749 | None:intergenic | 20.0% |
| !! | TATTTGAGCCAATATTATAT+TGG | - | chr2_3:23341002-23341021 | None:intergenic | 20.0% |
| !! | AAAGAATCAAAAGAGATATA+AGG | - | chr2_3:23339677-23339696 | None:intergenic | 20.0% |
| !!! | CAAAATTACACATTTTCAAA+TGG | - | chr2_3:23340051-23340070 | None:intergenic | 20.0% |
| !!! | GTTAGAAATCAATTCATTTT+CGG | - | chr2_3:23340593-23340612 | None:intergenic | 20.0% |
| !!! | CTACTTTTAATTAAACTTAG+TGG | - | chr2_3:23340644-23340663 | None:intergenic | 20.0% |
| !! | AAAAGTAGAAACTCATATAT+TGG | + | chr2_3:23340656-23340675 | Msa0284740:intron | 20.0% |
| !!! | TATGTTTTATCTTGATAGAA+TGG | - | chr2_3:23340730-23340749 | None:intergenic | 20.0% |
| !! | TATTTGAGCCAATATTATAT+TGG | - | chr2_3:23341002-23341021 | None:intergenic | 20.0% |
| !! | GTTTTTATACACACAGATTT+TGG | - | chr2_3:23339062-23339081 | None:intergenic | 25.0% |
| ! | ATGAAAACTTCAAAGTGATA+TGG | - | chr2_3:23339502-23339521 | None:intergenic | 25.0% |
| !!! | ATTTCATTTTGAAAATGTGC+AGG | + | chr2_3:23339724-23339743 | Msa0284740:intron | 25.0% |
| !!! | TTTCATTTTGAAAATGTGCA+GGG | + | chr2_3:23339725-23339744 | Msa0284740:intron | 25.0% |
| !!! | AATAATTTTTTTAGGCGAGT+TGG | + | chr2_3:23340469-23340488 | Msa0284740:intron | 25.0% |
| !!! | ATAATTTTTTTAGGCGAGTT+GGG | + | chr2_3:23340470-23340489 | Msa0284740:intron | 25.0% |
| ! | TGGAAAAAAACAACAAAAGT+TGG | - | chr2_3:23340624-23340643 | None:intergenic | 25.0% |
| ! | TAGAATGGCTTAACTATATA+TGG | - | chr2_3:23340715-23340734 | None:intergenic | 25.0% |
| !! | TTGTTGATTAATGTGTATAC+AGG | + | chr2_3:23340772-23340791 | Msa0284740:intron | 25.0% |
| ! | TTGGATTAATTAGCAATATG+TGG | - | chr2_3:23340927-23340946 | None:intergenic | 25.0% |
| !! | GTTTTTATACACACAGATTT+TGG | - | chr2_3:23339062-23339081 | None:intergenic | 25.0% |
| ! | ATGAAAACTTCAAAGTGATA+TGG | - | chr2_3:23339502-23339521 | None:intergenic | 25.0% |
| !!! | ATTTCATTTTGAAAATGTGC+AGG | + | chr2_3:23339724-23339743 | Msa0284740:intron | 25.0% |
| !!! | TTTCATTTTGAAAATGTGCA+GGG | + | chr2_3:23339725-23339744 | Msa0284740:intron | 25.0% |
| !!! | AATAATTTTTTTAGGCGAGT+TGG | + | chr2_3:23340469-23340488 | Msa0284740:intron | 25.0% |
| !!! | ATAATTTTTTTAGGCGAGTT+GGG | + | chr2_3:23340470-23340489 | Msa0284740:intron | 25.0% |
| ! | TGGAAAAAAACAACAAAAGT+TGG | - | chr2_3:23340624-23340643 | None:intergenic | 25.0% |
| ! | TAGAATGGCTTAACTATATA+TGG | - | chr2_3:23340715-23340734 | None:intergenic | 25.0% |
| !! | TTGTTGATTAATGTGTATAC+AGG | + | chr2_3:23340772-23340791 | Msa0284740:intron | 25.0% |
| ! | TTGGATTAATTAGCAATATG+TGG | - | chr2_3:23340927-23340946 | None:intergenic | 25.0% |
| CTGTGTGTATAAAAACTCAT+TGG | + | chr2_3:23339066-23339085 | Msa0284740:five_prime_UTR | 30.0% | |
| AAAAACTCATTGGTAGACTT+TGG | + | chr2_3:23339076-23339095 | Msa0284740:five_prime_UTR | 30.0% | |
| CAACTTTCAACTAAGTAACA+AGG | - | chr2_3:23339160-23339179 | None:intergenic | 30.0% | |
| CAATAGAGTTTACTAACGAT+TGG | - | chr2_3:23339222-23339241 | None:intergenic | 30.0% | |
| ! | TATAGGTATTGTTTGTTCGA+AGG | + | chr2_3:23339533-23339552 | Msa0284740:intron | 30.0% |
| ! | ATAGGTATTGTTTGTTCGAA+GGG | + | chr2_3:23339534-23339553 | Msa0284740:intron | 30.0% |
| CTCTAAGCATTTATAAGAAG+TGG | + | chr2_3:23339762-23339781 | Msa0284740:CDS | 30.0% | |
| AGCATTTATAAGAAGTGGAA+AGG | + | chr2_3:23339767-23339786 | Msa0284740:CDS | 30.0% | |
| GGTTATAGTGTAAACTATGA+AGG | + | chr2_3:23339788-23339807 | Msa0284740:CDS | 30.0% | |
| TTAACCAAACATGAATTTCC+AGG | - | chr2_3:23339845-23339864 | None:intergenic | 30.0% | |
| TCATGTTTGGTTAAGAACAA+AGG | + | chr2_3:23339851-23339870 | Msa0284740:CDS | 30.0% | |
| AATTACGGTCAAAGTAAGTT+AGG | - | chr2_3:23340075-23340094 | None:intergenic | 30.0% | |
| TCAACTGTGTCAAGTATTAT+GGG | + | chr2_3:23340248-23340267 | Msa0284740:intron | 30.0% | |
| ACAAACGAACCATATTTGTA+GGG | - | chr2_3:23340343-23340362 | None:intergenic | 30.0% | |
| CTGATTATGAGACTAATATG+TGG | + | chr2_3:23340364-23340383 | Msa0284740:intron | 30.0% | |
| CAAAACATTGAGATATGTTC+TGG | - | chr2_3:23340514-23340533 | None:intergenic | 30.0% | |
| ! | TGAATTGATTTCTAACCAAC+TGG | + | chr2_3:23340597-23340616 | Msa0284740:intron | 30.0% |
| !!! | TGATATGCCATTTTGCAAAA+AGG | + | chr2_3:23340688-23340707 | Msa0284740:intron | 30.0% |
| !!! | GATATGCCATTTTGCAAAAA+GGG | + | chr2_3:23340689-23340708 | Msa0284740:intron | 30.0% |
| TGATTAATGTGTATACAGGT+TGG | + | chr2_3:23340776-23340795 | Msa0284740:intron | 30.0% | |
| GATTAATGTGTATACAGGTT+GGG | + | chr2_3:23340777-23340796 | Msa0284740:intron | 30.0% | |
| GGAGAAATTGATAGAAAACA+AGG | + | chr2_3:23340814-23340833 | Msa0284740:CDS | 30.0% | |
| ATATCATGTAGTTGTGAAAC+CGG | + | chr2_3:23340841-23340860 | Msa0284740:CDS | 30.0% | |
| !!! | ATGGATCAAGCTTTTGTTTT+TGG | + | chr2_3:23340866-23340885 | Msa0284740:CDS | 30.0% |
| TTACATATGCATCAATGTGA+TGG | - | chr2_3:23341035-23341054 | None:intergenic | 30.0% | |
| CTGTGTGTATAAAAACTCAT+TGG | + | chr2_3:23339066-23339085 | Msa0284740:five_prime_UTR | 30.0% | |
| AAAAACTCATTGGTAGACTT+TGG | + | chr2_3:23339076-23339095 | Msa0284740:five_prime_UTR | 30.0% | |
| CAACTTTCAACTAAGTAACA+AGG | - | chr2_3:23339160-23339179 | None:intergenic | 30.0% | |
| CAATAGAGTTTACTAACGAT+TGG | - | chr2_3:23339222-23339241 | None:intergenic | 30.0% | |
| ! | TATAGGTATTGTTTGTTCGA+AGG | + | chr2_3:23339533-23339552 | Msa0284740:intron | 30.0% |
| ! | ATAGGTATTGTTTGTTCGAA+GGG | + | chr2_3:23339534-23339553 | Msa0284740:intron | 30.0% |
| CTCTAAGCATTTATAAGAAG+TGG | + | chr2_3:23339762-23339781 | Msa0284740:CDS | 30.0% | |
| AGCATTTATAAGAAGTGGAA+AGG | + | chr2_3:23339767-23339786 | Msa0284740:CDS | 30.0% | |
| GGTTATAGTGTAAACTATGA+AGG | + | chr2_3:23339788-23339807 | Msa0284740:CDS | 30.0% | |
| TTAACCAAACATGAATTTCC+AGG | - | chr2_3:23339845-23339864 | None:intergenic | 30.0% | |
| TCATGTTTGGTTAAGAACAA+AGG | + | chr2_3:23339851-23339870 | Msa0284740:CDS | 30.0% | |
| AATTACGGTCAAAGTAAGTT+AGG | - | chr2_3:23340075-23340094 | None:intergenic | 30.0% | |
| TCAACTGTGTCAAGTATTAT+GGG | + | chr2_3:23340248-23340267 | Msa0284740:intron | 30.0% | |
| ACAAACGAACCATATTTGTA+GGG | - | chr2_3:23340343-23340362 | None:intergenic | 30.0% | |
| CTGATTATGAGACTAATATG+TGG | + | chr2_3:23340364-23340383 | Msa0284740:intron | 30.0% | |
| CAAAACATTGAGATATGTTC+TGG | - | chr2_3:23340514-23340533 | None:intergenic | 30.0% | |
| ! | TGAATTGATTTCTAACCAAC+TGG | + | chr2_3:23340597-23340616 | Msa0284740:intron | 30.0% |
| !!! | TGATATGCCATTTTGCAAAA+AGG | + | chr2_3:23340688-23340707 | Msa0284740:intron | 30.0% |
| !!! | GATATGCCATTTTGCAAAAA+GGG | + | chr2_3:23340689-23340708 | Msa0284740:intron | 30.0% |
| TGATTAATGTGTATACAGGT+TGG | + | chr2_3:23340776-23340795 | Msa0284740:intron | 30.0% | |
| GATTAATGTGTATACAGGTT+GGG | + | chr2_3:23340777-23340796 | Msa0284740:intron | 30.0% | |
| GGAGAAATTGATAGAAAACA+AGG | + | chr2_3:23340814-23340833 | Msa0284740:CDS | 30.0% | |
| ATATCATGTAGTTGTGAAAC+CGG | + | chr2_3:23340841-23340860 | Msa0284740:CDS | 30.0% | |
| !!! | ATGGATCAAGCTTTTGTTTT+TGG | + | chr2_3:23340866-23340885 | Msa0284740:CDS | 30.0% |
| TTACATATGCATCAATGTGA+TGG | - | chr2_3:23341035-23341054 | None:intergenic | 30.0% | |
| ! | TACACACAGATTTTGGACAA+TGG | - | chr2_3:23339055-23339074 | None:intergenic | 35.0% |
| AACAAGGATTTCAAGCTTCT+TGG | - | chr2_3:23339109-23339128 | None:intergenic | 35.0% | |
| !! | GTTTTGTAGTCACTGATTGT+AGG | + | chr2_3:23339301-23339320 | Msa0284740:CDS | 35.0% |
| !! | GACTCAAAAGGTTGTTTTCA+AGG | + | chr2_3:23339323-23339342 | Msa0284740:CDS | 35.0% |
| !! | AAGGTTGTTTTCAAGGTTGA+TGG | + | chr2_3:23339330-23339349 | Msa0284740:CDS | 35.0% |
| ! | TTGATGGTTGTGGAATTCAT+GGG | + | chr2_3:23339346-23339365 | Msa0284740:CDS | 35.0% |
| ! | GAAGAGTTGATTCTAAGAGA+TGG | + | chr2_3:23339375-23339394 | Msa0284740:CDS | 35.0% |
| GTATTCAGCTTAAAAGAACC+TGG | + | chr2_3:23339824-23339843 | Msa0284740:CDS | 35.0% | |
| AGAACCTGGAAATTCATGTT+TGG | + | chr2_3:23339838-23339857 | Msa0284740:CDS | 35.0% | |
| TGGTTAAGAACAAAGGAATC+AGG | + | chr2_3:23339858-23339877 | Msa0284740:CDS | 35.0% | |
| GTCAACTGTGTCAAGTATTA+TGG | + | chr2_3:23340247-23340266 | Msa0284740:intron | 35.0% | |
| CTTGAGTATCCCTACAAATA+TGG | + | chr2_3:23340331-23340350 | Msa0284740:intron | 35.0% | |
| CACAAACGAACCATATTTGT+AGG | - | chr2_3:23340344-23340363 | None:intergenic | 35.0% | |
| ! | ATAAAGACTTGTTCGTGCTT+TGG | - | chr2_3:23340408-23340427 | None:intergenic | 35.0% |
| !! | TTTTGAGAGTTCAACTAACC+AGG | + | chr2_3:23340529-23340548 | Msa0284740:intron | 35.0% |
| ! | AACTAACCAGGTTCTAATGT+TGG | + | chr2_3:23340541-23340560 | Msa0284740:intron | 35.0% |
| ! | ATATGGCCCTTTTTGCAAAA+TGG | - | chr2_3:23340698-23340717 | None:intergenic | 35.0% |
| GGTTGGGATAAATAAAGAAG+TGG | + | chr2_3:23340793-23340812 | Msa0284740:intron | 35.0% | |
| TATCATGTAGTTGTGAAACC+GGG | + | chr2_3:23340842-23340861 | Msa0284740:CDS | 35.0% | |
| GCTACACTTGACTACATTTA+TGG | + | chr2_3:23340896-23340915 | Msa0284740:CDS | 35.0% | |
| ATATGCATCAATGTGATGGT+AGG | - | chr2_3:23341031-23341050 | None:intergenic | 35.0% | |
| TAAAGCATGCAGCTACATAT+GGG | + | chr2_3:23341052-23341071 | Msa0284740:three_prime_UTR | 35.0% | |
| ! | TACACACAGATTTTGGACAA+TGG | - | chr2_3:23339055-23339074 | None:intergenic | 35.0% |
| AACAAGGATTTCAAGCTTCT+TGG | - | chr2_3:23339109-23339128 | None:intergenic | 35.0% | |
| !! | GTTTTGTAGTCACTGATTGT+AGG | + | chr2_3:23339301-23339320 | Msa0284740:CDS | 35.0% |
| !! | GACTCAAAAGGTTGTTTTCA+AGG | + | chr2_3:23339323-23339342 | Msa0284740:CDS | 35.0% |
| !! | AAGGTTGTTTTCAAGGTTGA+TGG | + | chr2_3:23339330-23339349 | Msa0284740:CDS | 35.0% |
| ! | TTGATGGTTGTGGAATTCAT+GGG | + | chr2_3:23339346-23339365 | Msa0284740:CDS | 35.0% |
| ! | GAAGAGTTGATTCTAAGAGA+TGG | + | chr2_3:23339375-23339394 | Msa0284740:CDS | 35.0% |
| GTATTCAGCTTAAAAGAACC+TGG | + | chr2_3:23339824-23339843 | Msa0284740:CDS | 35.0% | |
| AGAACCTGGAAATTCATGTT+TGG | + | chr2_3:23339838-23339857 | Msa0284740:CDS | 35.0% | |
| TGGTTAAGAACAAAGGAATC+AGG | + | chr2_3:23339858-23339877 | Msa0284740:CDS | 35.0% | |
| GTCAACTGTGTCAAGTATTA+TGG | + | chr2_3:23340247-23340266 | Msa0284740:intron | 35.0% | |
| CTTGAGTATCCCTACAAATA+TGG | + | chr2_3:23340331-23340350 | Msa0284740:intron | 35.0% | |
| CACAAACGAACCATATTTGT+AGG | - | chr2_3:23340344-23340363 | None:intergenic | 35.0% | |
| ! | ATAAAGACTTGTTCGTGCTT+TGG | - | chr2_3:23340408-23340427 | None:intergenic | 35.0% |
| !! | TTTTGAGAGTTCAACTAACC+AGG | + | chr2_3:23340529-23340548 | Msa0284740:intron | 35.0% |
| ! | AACTAACCAGGTTCTAATGT+TGG | + | chr2_3:23340541-23340560 | Msa0284740:intron | 35.0% |
| ! | ATATGGCCCTTTTTGCAAAA+TGG | - | chr2_3:23340698-23340717 | None:intergenic | 35.0% |
| GGTTGGGATAAATAAAGAAG+TGG | + | chr2_3:23340793-23340812 | Msa0284740:intron | 35.0% | |
| TATCATGTAGTTGTGAAACC+GGG | + | chr2_3:23340842-23340861 | Msa0284740:CDS | 35.0% | |
| GCTACACTTGACTACATTTA+TGG | + | chr2_3:23340896-23340915 | Msa0284740:CDS | 35.0% | |
| ATATGCATCAATGTGATGGT+AGG | - | chr2_3:23341031-23341050 | None:intergenic | 35.0% | |
| TAAAGCATGCAGCTACATAT+GGG | + | chr2_3:23341052-23341071 | Msa0284740:three_prime_UTR | 35.0% | |
| ! | CACAGATTTTGGACAATGGT+TGG | - | chr2_3:23339051-23339070 | None:intergenic | 40.0% |
| ! | CACTGATTGTAGGACTCAAA+AGG | + | chr2_3:23339311-23339330 | Msa0284740:CDS | 40.0% |
| !!! | GTTTTCAAGGTTGATGGTTG+TGG | + | chr2_3:23339336-23339355 | Msa0284740:CDS | 40.0% |
| !! | GTTGATGGTTGTGGAATTCA+TGG | + | chr2_3:23339345-23339364 | Msa0284740:CDS | 40.0% |
| TTTGCTTCTCATGCGTAGAA+AGG | + | chr2_3:23339410-23339429 | Msa0284740:CDS | 40.0% | |
| !! | CATTTTGAAAATGTGCAGGG+AGG | + | chr2_3:23339728-23339747 | Msa0284740:intron | 40.0% |
| TGCAGCATTGTTGATACTAG+AGG | + | chr2_3:23339956-23339975 | Msa0284740:CDS | 40.0% | |
| TTCAAATGGGTCATCTATCG+CGG | - | chr2_3:23340037-23340056 | None:intergenic | 40.0% | |
| CTGTGTCAAGTATTATGGGA+CGG | + | chr2_3:23340252-23340271 | Msa0284740:intron | 40.0% | |
| TGAGACTAATATGTGGTCGA+CGG | + | chr2_3:23340371-23340390 | Msa0284740:intron | 40.0% | |
| !! | CAGGTTCTAATGTTGGTAGT+GGG | + | chr2_3:23340548-23340567 | Msa0284740:intron | 40.0% |
| ! | ACAACAAAAGTTGGTCCAGT+TGG | - | chr2_3:23340615-23340634 | None:intergenic | 40.0% |
| ATCATGTAGTTGTGAAACCG+GGG | + | chr2_3:23340843-23340862 | Msa0284740:CDS | 40.0% | |
| ! | ATGCTAGCTCTTCACAACTT+TGG | - | chr2_3:23340946-23340965 | None:intergenic | 40.0% |
| GTAAAGCATGCAGCTACATA+TGG | + | chr2_3:23341051-23341070 | Msa0284740:three_prime_UTR | 40.0% | |
| ! | CACAGATTTTGGACAATGGT+TGG | - | chr2_3:23339051-23339070 | None:intergenic | 40.0% |
| ! | CACTGATTGTAGGACTCAAA+AGG | + | chr2_3:23339311-23339330 | Msa0284740:CDS | 40.0% |
| !!! | GTTTTCAAGGTTGATGGTTG+TGG | + | chr2_3:23339336-23339355 | Msa0284740:CDS | 40.0% |
| !! | GTTGATGGTTGTGGAATTCA+TGG | + | chr2_3:23339345-23339364 | Msa0284740:CDS | 40.0% |
| TTTGCTTCTCATGCGTAGAA+AGG | + | chr2_3:23339410-23339429 | Msa0284740:CDS | 40.0% | |
| !! | CATTTTGAAAATGTGCAGGG+AGG | + | chr2_3:23339728-23339747 | Msa0284740:intron | 40.0% |
| TGCAGCATTGTTGATACTAG+AGG | + | chr2_3:23339956-23339975 | Msa0284740:CDS | 40.0% | |
| TTCAAATGGGTCATCTATCG+CGG | - | chr2_3:23340037-23340056 | None:intergenic | 40.0% | |
| CTGTGTCAAGTATTATGGGA+CGG | + | chr2_3:23340252-23340271 | Msa0284740:intron | 40.0% | |
| TGAGACTAATATGTGGTCGA+CGG | + | chr2_3:23340371-23340390 | Msa0284740:intron | 40.0% | |
| !! | CAGGTTCTAATGTTGGTAGT+GGG | + | chr2_3:23340548-23340567 | Msa0284740:intron | 40.0% |
| ! | ACAACAAAAGTTGGTCCAGT+TGG | - | chr2_3:23340615-23340634 | None:intergenic | 40.0% |
| ATCATGTAGTTGTGAAACCG+GGG | + | chr2_3:23340843-23340862 | Msa0284740:CDS | 40.0% | |
| ! | ATGCTAGCTCTTCACAACTT+TGG | - | chr2_3:23340946-23340965 | None:intergenic | 40.0% |
| GTAAAGCATGCAGCTACATA+TGG | + | chr2_3:23341051-23341070 | Msa0284740:three_prime_UTR | 40.0% | |
| AAAAGGCCACATGTAGTGAG+TGG | + | chr2_3:23339273-23339292 | Msa0284740:CDS | 45.0% | |
| TGAAAATGTGCAGGGAGGTA+TGG | + | chr2_3:23339733-23339752 | Msa0284740:intron | 45.0% | |
| ATCAGGATTGCAATTGAGCC+AGG | + | chr2_3:23339875-23339894 | Msa0284740:CDS | 45.0% | |
| TCAGGATTGCAATTGAGCCA+GGG | + | chr2_3:23339876-23339895 | Msa0284740:CDS | 45.0% | |
| GGCTGTTAGTAACAAAGGCT+GGG | + | chr2_3:23339898-23339917 | Msa0284740:CDS | 45.0% | |
| !! | AAGGCTGGGACTTTGAGATT+AGG | + | chr2_3:23339912-23339931 | Msa0284740:CDS | 45.0% |
| !! | AGGCTGGGACTTTGAGATTA+GGG | + | chr2_3:23339913-23339932 | Msa0284740:CDS | 45.0% |
| CAATGCTGCAATGCTTGTCA+GGG | - | chr2_3:23339946-23339965 | None:intergenic | 45.0% | |
| ACAATGCTGCAATGCTTGTC+AGG | - | chr2_3:23339947-23339966 | None:intergenic | 45.0% | |
| TAGAGGCAACATAGTAGCAC+AGG | + | chr2_3:23339973-23339992 | Msa0284740:CDS | 45.0% | |
| TCAAATGGGTCATCTATCGC+GGG | - | chr2_3:23340036-23340055 | None:intergenic | 45.0% | |
| TGTCAAGTATTATGGGACGG+AGG | + | chr2_3:23340255-23340274 | Msa0284740:intron | 45.0% | |
| GTCAAGTATTATGGGACGGA+GGG | + | chr2_3:23340256-23340275 | Msa0284740:intron | 45.0% | |
| TTGTTCGTGCTTTGGTTAGG+AGG | - | chr2_3:23340400-23340419 | None:intergenic | 45.0% | |
| ! | GACTTGTTCGTGCTTTGGTT+AGG | - | chr2_3:23340403-23340422 | None:intergenic | 45.0% |
| CCACTACCAACATTAGAACC+TGG | - | chr2_3:23340550-23340569 | None:intergenic | 45.0% | |
| ! | CCAGGTTCTAATGTTGGTAG+TGG | + | chr2_3:23340547-23340566 | Msa0284740:intron | 45.0% |
| ACAAAAGCTTGATCCATCCC+CGG | - | chr2_3:23340863-23340882 | None:intergenic | 45.0% | |
| AAAAGGCCACATGTAGTGAG+TGG | + | chr2_3:23339273-23339292 | Msa0284740:CDS | 45.0% | |
| TGAAAATGTGCAGGGAGGTA+TGG | + | chr2_3:23339733-23339752 | Msa0284740:intron | 45.0% | |
| ATCAGGATTGCAATTGAGCC+AGG | + | chr2_3:23339875-23339894 | Msa0284740:CDS | 45.0% | |
| TCAGGATTGCAATTGAGCCA+GGG | + | chr2_3:23339876-23339895 | Msa0284740:CDS | 45.0% | |
| GGCTGTTAGTAACAAAGGCT+GGG | + | chr2_3:23339898-23339917 | Msa0284740:CDS | 45.0% | |
| !! | AAGGCTGGGACTTTGAGATT+AGG | + | chr2_3:23339912-23339931 | Msa0284740:CDS | 45.0% |
| !! | AGGCTGGGACTTTGAGATTA+GGG | + | chr2_3:23339913-23339932 | Msa0284740:CDS | 45.0% |
| CAATGCTGCAATGCTTGTCA+GGG | - | chr2_3:23339946-23339965 | None:intergenic | 45.0% | |
| ACAATGCTGCAATGCTTGTC+AGG | - | chr2_3:23339947-23339966 | None:intergenic | 45.0% | |
| TAGAGGCAACATAGTAGCAC+AGG | + | chr2_3:23339973-23339992 | Msa0284740:CDS | 45.0% | |
| TCAAATGGGTCATCTATCGC+GGG | - | chr2_3:23340036-23340055 | None:intergenic | 45.0% | |
| TGTCAAGTATTATGGGACGG+AGG | + | chr2_3:23340255-23340274 | Msa0284740:intron | 45.0% | |
| GTCAAGTATTATGGGACGGA+GGG | + | chr2_3:23340256-23340275 | Msa0284740:intron | 45.0% | |
| TTGTTCGTGCTTTGGTTAGG+AGG | - | chr2_3:23340400-23340419 | None:intergenic | 45.0% | |
| ! | GACTTGTTCGTGCTTTGGTT+AGG | - | chr2_3:23340403-23340422 | None:intergenic | 45.0% |
| CCACTACCAACATTAGAACC+TGG | - | chr2_3:23340550-23340569 | None:intergenic | 45.0% | |
| ! | CCAGGTTCTAATGTTGGTAG+TGG | + | chr2_3:23340547-23340566 | Msa0284740:intron | 45.0% |
| ACAAAAGCTTGATCCATCCC+CGG | - | chr2_3:23340863-23340882 | None:intergenic | 45.0% | |
| !!! | ATTTTGATAATAATTTTTTT+AGG | + | chr2_3:23340461-23340480 | Msa0284740:intron | 5.0% |
| !!! | ATTTTGATAATAATTTTTTT+AGG | + | chr2_3:23340461-23340480 | Msa0284740:intron | 5.0% |
| CTATTGTTCGTCGTCGCAGA+CGG | + | chr2_3:23339236-23339255 | Msa0284740:CDS | 50.0% | |
| CAGGATTGCAATTGAGCCAG+GGG | + | chr2_3:23339877-23339896 | Msa0284740:CDS | 50.0% | |
| CCTTTGTTACTAACAGCCCC+TGG | - | chr2_3:23339896-23339915 | None:intergenic | 50.0% | |
| CCAGGGGCTGTTAGTAACAA+AGG | + | chr2_3:23339893-23339912 | Msa0284740:CDS | 50.0% | |
| GGGCTGTTAGTAACAAAGGC+TGG | + | chr2_3:23339897-23339916 | Msa0284740:CDS | 50.0% | |
| !! | GGCTGGGACTTTGAGATTAG+GGG | + | chr2_3:23339914-23339933 | Msa0284740:CDS | 50.0% |
| ! | TTTAGGCGAGTTGGGTCTTG+AGG | + | chr2_3:23340478-23340497 | Msa0284740:intron | 50.0% |
| TGTAGTTGTGAAACCGGGGA+TGG | + | chr2_3:23340847-23340866 | Msa0284740:CDS | 50.0% | |
| CTATTGTTCGTCGTCGCAGA+CGG | + | chr2_3:23339236-23339255 | Msa0284740:CDS | 50.0% | |
| CAGGATTGCAATTGAGCCAG+GGG | + | chr2_3:23339877-23339896 | Msa0284740:CDS | 50.0% | |
| CCTTTGTTACTAACAGCCCC+TGG | - | chr2_3:23339896-23339915 | None:intergenic | 50.0% | |
| CCAGGGGCTGTTAGTAACAA+AGG | + | chr2_3:23339893-23339912 | Msa0284740:CDS | 50.0% | |
| GGGCTGTTAGTAACAAAGGC+TGG | + | chr2_3:23339897-23339916 | Msa0284740:CDS | 50.0% | |
| !! | GGCTGGGACTTTGAGATTAG+GGG | + | chr2_3:23339914-23339933 | Msa0284740:CDS | 50.0% |
| ! | TTTAGGCGAGTTGGGTCTTG+AGG | + | chr2_3:23340478-23340497 | Msa0284740:intron | 50.0% |
| TGTAGTTGTGAAACCGGGGA+TGG | + | chr2_3:23340847-23340866 | Msa0284740:CDS | 50.0% | |
| ! | CGGTGTTGGGTGTGAGGAAA+AGG | + | chr2_3:23339256-23339275 | Msa0284740:CDS | 55.0% |
| AGGCCACATGTAGTGAGTGG+TGG | + | chr2_3:23339276-23339295 | Msa0284740:CDS | 55.0% | |
| CCACCACCACTCACTACATG+TGG | - | chr2_3:23339282-23339301 | None:intergenic | 55.0% | |
| CCACATGTAGTGAGTGGTGG+TGG | + | chr2_3:23339279-23339298 | Msa0284740:CDS | 55.0% | |
| ! | TGTGCAGGGAGGTATGGTTG+AGG | + | chr2_3:23339739-23339758 | Msa0284740:intron | 55.0% |
| GTCATCTATCGCGGGAAGGA+GGG | - | chr2_3:23340028-23340047 | None:intergenic | 55.0% | |
| ATGGGTCATCTATCGCGGGA+AGG | - | chr2_3:23340032-23340051 | None:intergenic | 55.0% | |
| ! | CGGTGTTGGGTGTGAGGAAA+AGG | + | chr2_3:23339256-23339275 | Msa0284740:CDS | 55.0% |
| AGGCCACATGTAGTGAGTGG+TGG | + | chr2_3:23339276-23339295 | Msa0284740:CDS | 55.0% | |
| CCACCACCACTCACTACATG+TGG | - | chr2_3:23339282-23339301 | None:intergenic | 55.0% | |
| CCACATGTAGTGAGTGGTGG+TGG | + | chr2_3:23339279-23339298 | Msa0284740:CDS | 55.0% | |
| ! | TGTGCAGGGAGGTATGGTTG+AGG | + | chr2_3:23339739-23339758 | Msa0284740:intron | 55.0% |
| GTCATCTATCGCGGGAAGGA+GGG | - | chr2_3:23340028-23340047 | None:intergenic | 55.0% | |
| ATGGGTCATCTATCGCGGGA+AGG | - | chr2_3:23340032-23340051 | None:intergenic | 55.0% | |
| TTCGTCGTCGCAGACGGTGT+TGG | + | chr2_3:23339242-23339261 | Msa0284740:CDS | 60.0% | |
| TCGTCGTCGCAGACGGTGTT+GGG | + | chr2_3:23339243-23339262 | Msa0284740:CDS | 60.0% | |
| GGTCATCTATCGCGGGAAGG+AGG | - | chr2_3:23340029-23340048 | None:intergenic | 60.0% | |
| TTCGTCGTCGCAGACGGTGT+TGG | + | chr2_3:23339242-23339261 | Msa0284740:CDS | 60.0% | |
| TCGTCGTCGCAGACGGTGTT+GGG | + | chr2_3:23339243-23339262 | Msa0284740:CDS | 60.0% | |
| GGTCATCTATCGCGGGAAGG+AGG | - | chr2_3:23340029-23340048 | None:intergenic | 60.0% | |
| ! | CGCAGACGGTGTTGGGTGTG+AGG | + | chr2_3:23339250-23339269 | Msa0284740:CDS | 65.0% |
| ! | CGCAGACGGTGTTGGGTGTG+AGG | + | chr2_3:23339250-23339269 | Msa0284740:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 23339012 | 23341088 | 23339012 | ID=Msa0284740;Name=Msa0284740 |
| chr2_3 | mRNA | 23339012 | 23341088 | 23339012 | ID=Msa0284740-mRNA-1;Parent=Msa0284740;Name=Msa0284740-mRNA-1;_AED=0.00;_eAED=0.00;_QI=192|1|1|1|1|1|3|151|206 |
| chr2_3 | exon | 23339012 | 23339431 | 23339012 | ID=Msa0284740-mRNA-1:exon:8953;Parent=Msa0284740-mRNA-1 |
| chr2_3 | exon | 23339746 | 23339994 | 23339746 | ID=Msa0284740-mRNA-1:exon:8954;Parent=Msa0284740-mRNA-1 |
| chr2_3 | exon | 23340794 | 23341088 | 23340794 | ID=Msa0284740-mRNA-1:exon:8955;Parent=Msa0284740-mRNA-1 |
| chr2_3 | five_prime_UTR | 23339012 | 23339203 | 23339012 | ID=Msa0284740-mRNA-1:five_prime_utr;Parent=Msa0284740-mRNA-1 |
| chr2_3 | CDS | 23339204 | 23339431 | 23339204 | ID=Msa0284740-mRNA-1:cds;Parent=Msa0284740-mRNA-1 |
| chr2_3 | CDS | 23339746 | 23339994 | 23339746 | ID=Msa0284740-mRNA-1:cds;Parent=Msa0284740-mRNA-1 |
| chr2_3 | CDS | 23340794 | 23340937 | 23340794 | ID=Msa0284740-mRNA-1:cds;Parent=Msa0284740-mRNA-1 |
| chr2_3 | three_prime_UTR | 23340938 | 23341088 | 23340938 | ID=Msa0284740-mRNA-1:three_prime_utr;Parent=Msa0284740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
