AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0818890


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0818890 MtrunA17_Chr5g0437761 97.395 499 10 1 1 499 1 496 0.0 999
Msa0818890 MtrunA17_Chr3g0114221 69.355 496 139 7 8 498 7 494 0.0 696
Msa0818890 MtrunA17_Chr1g0207751 30.576 399 240 12 119 496 169 551 2.21e-50 181
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0818890 AT2G40390.1 55.754 504 210 5 1 499 1 496 0.0 573
Msa0818890 AT5G64190.1 53.600 500 218 8 8 498 7 501 0.0 521
Msa0818890 AT5G64190.2 53.600 500 218 8 8 498 8 502 0.0 521
Msa0818890 AT2G15020.1 26.335 543 324 16 7 496 1 520 1.28e-51 184

Find 84 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATGCCTATTTCCATTAT+TGG 0.166320 5_3:-54996144 None:intergenic
AACTAGGAGGTTGGAGTTTA+GGG 0.189509 5_3:+54996581 Msa0818890:CDS
GAAACTATTAGGTTCTAATT+TGG 0.200345 5_3:+54994929 Msa0818890:CDS
AAATTTGAAGAATCGGTTTA+TGG 0.202767 5_3:+54996261 Msa0818890:CDS
AGATTATGGAATGGGAAATT+AGG 0.215093 5_3:+54996505 Msa0818890:CDS
TTTGGAATAGTTTCAAGTTT+TGG 0.229221 5_3:-54994756 None:intergenic
AAACTAGGAGGTTGGAGTTT+AGG 0.246270 5_3:+54996580 Msa0818890:CDS
ATACAAGACATCCTTAATTA+TGG 0.252935 5_3:+54994696 Msa0818890:CDS
GTATTGTCCTCTTATAAATA+TGG 0.256126 5_3:+54995103 Msa0818890:CDS
TTAACCTTGCTATTACAAAT+TGG 0.271133 5_3:+54994973 Msa0818890:CDS
TTGAAAATGTCACTAAAGTT+TGG 0.294909 5_3:-54994774 None:intergenic
GGGAAATTAGGGGTTGGATA+TGG 0.296559 5_3:+54996517 Msa0818890:CDS
ACCCCACCTTGTCTAGTAAA+AGG 0.303601 5_3:-54996417 None:intergenic
GAAAATCCAATAATGGAAAT+AGG 0.304600 5_3:+54996138 Msa0818890:CDS
GCTCCTTCGGATCTTCGTTA+TGG 0.315156 5_3:+54994840 Msa0818890:CDS
CTAAGTCTTGGTTTAGAGAT+AGG 0.319369 5_3:+54996376 Msa0818890:CDS
GATTATGGAATGGGAAATTA+GGG 0.322963 5_3:+54996506 Msa0818890:CDS
ACGTTGTTGATGAAACTATT+AGG 0.324276 5_3:+54994918 Msa0818890:CDS
GCATTAAAGGAACAATTATC+AGG 0.333794 5_3:+54994873 Msa0818890:CDS
CTCCTTCGGATCTTCGTTAT+GGG 0.338482 5_3:+54994841 Msa0818890:CDS
CAGCTCCTCTTTCATTCATA+AGG 0.338915 5_3:-54996020 None:intergenic
AAGTGCTAGAGGGAAGATTA+TGG 0.342959 5_3:+54996491 Msa0818890:CDS
TAGAATGTCCTATACTTATT+AGG 0.345792 5_3:-54996552 None:intergenic
ATCCTCAGAAAATCCAATAA+TGG 0.359644 5_3:+54996131 Msa0818890:CDS
TTTCTTTGATAAAGGCTTTG+TGG 0.363369 5_3:-54995214 None:intergenic
GTTATAGTGCAAATTTGAAT+TGG 0.366425 5_3:+54996283 Msa0818890:CDS
CTTATTTGCCTAATAAGTAT+AGG 0.370748 5_3:+54996544 Msa0818890:CDS
TGGGTGTCTTAATGCATTAA+AGG 0.376238 5_3:+54994860 Msa0818890:CDS
CTCAAATATCAACAACTTGA+AGG 0.385045 5_3:+54995176 Msa0818890:CDS
TTGGTTTCTTCATGATAGTA+TGG 0.390260 5_3:+54996302 Msa0818890:CDS
ATTAACAAGGAGATTTGAAA+TGG 0.400275 5_3:-54994670 None:intergenic
GCCTTGGAAATTTGAAGAAT+CGG 0.401479 5_3:+54996254 Msa0818890:CDS
ACTCCAACCTCCTAGTTTCA+TGG 0.411113 5_3:-54996575 None:intergenic
CAACAATGAGTTTAAAGCCT+TGG 0.411370 5_3:+54996238 Msa0818890:CDS
TAGCAATGAACATAAGCTTA+AGG 0.412410 5_3:-54994496 None:intergenic
AGCCCTATGTAGGGATTTGT+TGG 0.418015 5_3:-54996192 None:intergenic
CCAATATCCGAATGGAAAAC+AGG 0.429810 5_3:+54994465 Msa0818890:CDS
GTTCTAATTTGGAAGAAAAG+TGG 0.431200 5_3:+54994940 Msa0818890:CDS
TTGCATTTATGAAGCTCCTT+CGG 0.440069 5_3:+54994827 Msa0818890:CDS
AGCTCCTCTTTCATTCATAA+GGG 0.447164 5_3:-54996019 None:intergenic
TGGTGAACATTGACAACATA+AGG 0.454093 5_3:+54995252 Msa0818890:CDS
CTATCTCTAAACCAAGACTT+AGG 0.456609 5_3:-54996375 None:intergenic
ACAACATCCATATTTATAAG+AGG 0.464944 5_3:-54995110 None:intergenic
AATTAATTAACCCTAAGTCT+TGG 0.472762 5_3:+54996364 Msa0818890:CDS
TAGAGGGAAGATTATGGAAT+GGG 0.487526 5_3:+54996497 Msa0818890:CDS
AGAAAAGTGGGTCGAAATCA+TGG 0.489209 5_3:+54995232 Msa0818890:CDS
TGCTATTACAAATTGGATTG+TGG 0.497116 5_3:+54994980 Msa0818890:CDS
AAGCCTTTATCAAAGAAAAG+TGG 0.498184 5_3:+54995219 Msa0818890:CDS
TTTCTTCATGATAGTATGGA+TGG 0.509936 5_3:+54996306 Msa0818890:CDS
CAACCAACAAATCCCTACAT+AGG 0.511769 5_3:+54996189 Msa0818890:CDS
ACCGATTCTTCAAATTTCCA+AGG 0.517511 5_3:-54996255 None:intergenic
AGGCTTTAAACTCATTGTTG+TGG 0.521841 5_3:-54996235 None:intergenic
ATAGGGCTCAACGTATCAGC+TGG 0.526734 5_3:+54996207 Msa0818890:CDS
AGTTGCAATGATATTCTTGA+TGG 0.528882 5_3:-54996063 None:intergenic
TCCAATAATGGAAATAGGCA+TGG 0.529685 5_3:+54996143 Msa0818890:CDS
TGATACGTTGAGCCCTATGT+AGG 0.533661 5_3:-54996202 None:intergenic
ATCTCAATATTCCTTAGCTT+AGG 0.533809 5_3:+54996613 Msa0818890:exon
GACACCCTTATGAATGAAAG+AGG 0.534438 5_3:+54996015 Msa0818890:CDS
TATCTCTAAACCAAGACTTA+GGG 0.543035 5_3:-54996374 None:intergenic
AAGACTTGATGTTGGAGTGT+TGG 0.551465 5_3:-54996090 None:intergenic
CTTATGAATGAAAGAGGAGC+TGG 0.553722 5_3:+54996021 Msa0818890:CDS
TCTGCGTTATTCCTAAGCTA+AGG 0.561078 5_3:-54996624 None:intergenic
CTACCATGAAACTAGGAGGT+TGG 0.561866 5_3:+54996572 Msa0818890:CDS
ATACACTTAAGACTTGATGT+TGG 0.563809 5_3:-54996098 None:intergenic
GCATAAGAAAATAAAGGAGA+TGG 0.564632 5_3:-54995047 None:intergenic
CAATCCAATTTGTAATAGCA+AGG 0.565470 5_3:-54994977 None:intergenic
TGGAATGGGAAATTAGGGGT+TGG 0.568241 5_3:+54996511 Msa0818890:CDS
GGACATTCTACCATGAAACT+AGG 0.571006 5_3:+54996565 Msa0818890:CDS
AACCAACAAATCCCTACATA+GGG 0.573510 5_3:+54996190 Msa0818890:CDS
AAAGTTGATAAAAGTGCTAG+AGG 0.576839 5_3:+54996480 Msa0818890:CDS
AGCCTTTATCAAAGAAAAGT+GGG 0.590107 5_3:+54995220 Msa0818890:CDS
CTAGAGGGAAGATTATGGAA+TGG 0.593772 5_3:+54996496 Msa0818890:CDS
GAAGTCTCTCATCAGCTGCA+TGG 0.595852 5_3:-54995145 None:intergenic
TAAGCTAAGGAATATTGAGA+TGG 0.598868 5_3:-54996611 None:intergenic
CAAGTCTTAAGTGTATCCGT+TGG 0.601844 5_3:+54996105 Msa0818890:CDS
ATCTTCCACCAATATCCGAA+TGG 0.602427 5_3:+54994457 Msa0818890:CDS
AAGTTGATAAAAGTGCTAGA+GGG 0.617052 5_3:+54996481 Msa0818890:CDS
GTTGCAATGATATTCTTGAT+GGG 0.617241 5_3:-54996062 None:intergenic
CACCCATAACGAAGATCCGA+AGG 0.619176 5_3:-54994843 None:intergenic
AATATGGAGAAAGTGTGTGT+TGG 0.621471 5_3:+54996457 Msa0818890:CDS
CATTCTACCATGAAACTAGG+AGG 0.670138 5_3:+54996568 Msa0818890:CDS
GATATGGTAAGATTAAGTGA+TGG 0.681734 5_3:-54994531 None:intergenic
TGTCTTGTATGAAATTAACA+AGG 0.695812 5_3:-54994683 None:intergenic
ATTATGGAATGGGAAATTAG+GGG 0.711741 5_3:+54996507 Msa0818890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAAAAAAAAACCTTTT+AGG - chr5_3:54995362-54995381 None:intergenic 10.0%
!!! AAAACTAATCTAAATTTTTT+TGG + chr5_3:54995517-54995536 Msa0818890:intron 10.0%
!! ATTGAATATTTAAATTTCTT+TGG + chr5_3:54995963-54995982 Msa0818890:intron 10.0%
!!! TTAATTAATTCAAATTTTGA+TGG - chr5_3:54996354-54996373 None:intergenic 10.0%
!!! AAAAAAAAAAAAAACCTTTT+AGG - chr5_3:54995362-54995381 None:intergenic 10.0%
!!! AAAACTAATCTAAATTTTTT+TGG + chr5_3:54995517-54995536 Msa0818890:intron 10.0%
!! ATTGAATATTTAAATTTCTT+TGG + chr5_3:54995963-54995982 Msa0818890:intron 10.0%
!!! TTAATTAATTCAAATTTTGA+TGG - chr5_3:54996354-54996373 None:intergenic 10.0%
!!! TATTTTTTGAACCATAATTA+AGG - chr5_3:54994710-54994729 None:intergenic 15.0%
!! AAAAAAAGTAAAGATTTGAT+TGG - chr5_3:54995673-54995692 None:intergenic 15.0%
!!! AGAAATTTTATTTGATGAAA+GGG - chr5_3:54995847-54995866 None:intergenic 15.0%
!!! TATTTTTTGAACCATAATTA+AGG - chr5_3:54994710-54994729 None:intergenic 15.0%
!! AAAAAAAGTAAAGATTTGAT+TGG - chr5_3:54995673-54995692 None:intergenic 15.0%
!!! AGAAATTTTATTTGATGAAA+GGG - chr5_3:54995847-54995866 None:intergenic 15.0%
!!! ATAATATCCCTATTTTTCTT+TGG + chr5_3:54994601-54994620 Msa0818890:CDS 20.0%
!!! ATTTTATTGCTAGGTTTTAA+TGG - chr5_3:54994636-54994655 None:intergenic 20.0%
!!! TTTTTTAACTCTCTTATTCT+TGG + chr5_3:54994803-54994822 Msa0818890:CDS 20.0%
!!! GAAAAAGCATAAGAAAATAA+AGG - chr5_3:54995056-54995075 None:intergenic 20.0%
!!! AATCTAAATTTTTTTGGTAG+TGG + chr5_3:54995523-54995542 Msa0818890:intron 20.0%
!!! GAGAAATTTTATTTGATGAA+AGG - chr5_3:54995848-54995867 None:intergenic 20.0%
!!! ATAATATCCCTATTTTTCTT+TGG + chr5_3:54994601-54994620 Msa0818890:CDS 20.0%
!!! ATTTTATTGCTAGGTTTTAA+TGG - chr5_3:54994636-54994655 None:intergenic 20.0%
!!! TTTTTTAACTCTCTTATTCT+TGG + chr5_3:54994803-54994822 Msa0818890:CDS 20.0%
!!! GAAAAAGCATAAGAAAATAA+AGG - chr5_3:54995056-54995075 None:intergenic 20.0%
!!! AATCTAAATTTTTTTGGTAG+TGG + chr5_3:54995523-54995542 Msa0818890:intron 20.0%
!!! GAGAAATTTTATTTGATGAA+AGG - chr5_3:54995848-54995867 None:intergenic 20.0%
!! AATAGCAAAAGAGAGTTTTT+GGG - chr5_3:54994571-54994590 None:intergenic 25.0%
!! TCATGTGATATTTTATTGCT+AGG - chr5_3:54994645-54994664 None:intergenic 25.0%
! ATTAACAAGGAGATTTGAAA+TGG - chr5_3:54994673-54994692 None:intergenic 25.0%
! TGTCTTGTATGAAATTAACA+AGG - chr5_3:54994686-54994705 None:intergenic 25.0%
! ATACAAGACATCCTTAATTA+TGG + chr5_3:54994696-54994715 Msa0818890:CDS 25.0%
!!! TTTGGAATAGTTTCAAGTTT+TGG - chr5_3:54994759-54994778 None:intergenic 25.0%
! TTGAAAATGTCACTAAAGTT+TGG - chr5_3:54994777-54994796 None:intergenic 25.0%
! ATAAGAGAGTTAAAAAAGCA+AGG - chr5_3:54994800-54994819 None:intergenic 25.0%
!! GAAACTATTAGGTTCTAATT+TGG + chr5_3:54994929-54994948 Msa0818890:CDS 25.0%
!!! TTAACCTTGCTATTACAAAT+TGG + chr5_3:54994973-54994992 Msa0818890:CDS 25.0%
!!! TCTTATGCTTTTTCAACATT+TGG + chr5_3:54995062-54995081 Msa0818890:CDS 25.0%
!!! CTTATGCTTTTTCAACATTT+GGG + chr5_3:54995063-54995082 Msa0818890:CDS 25.0%
! GTATTGTCCTCTTATAAATA+TGG + chr5_3:54995103-54995122 Msa0818890:CDS 25.0%
! ACAACATCCATATTTATAAG+AGG - chr5_3:54995113-54995132 None:intergenic 25.0%
!!! AAAAAACCTTTTAGGTTTGA+TGG - chr5_3:54995354-54995373 None:intergenic 25.0%
!!! CTTTGTTTGGATCTTTTTAA+TGG - chr5_3:54995435-54995454 None:intergenic 25.0%
! CATTAAAAAGATCCAAACAA+AGG + chr5_3:54995433-54995452 Msa0818890:intron 25.0%
!!! AGTTTTTTTACTCCTTTGTT+TGG - chr5_3:54995448-54995467 None:intergenic 25.0%
! AGAAAACAAAACAAAAGAGA+GGG - chr5_3:54995734-54995753 None:intergenic 25.0%
! AAGAAAACAAAACAAAAGAG+AGG - chr5_3:54995735-54995754 None:intergenic 25.0%
!!! TCTTAATGTTTGTTGAGTTT+TGG + chr5_3:54995751-54995770 Msa0818890:intron 25.0%
! ATACTCGTTGTACTTAAATT+TGG + chr5_3:54995784-54995803 Msa0818890:intron 25.0%
! TACTCGTTGTACTTAAATTT+GGG + chr5_3:54995785-54995804 Msa0818890:intron 25.0%
!! GAAAATCCAATAATGGAAAT+AGG + chr5_3:54996138-54996157 Msa0818890:CDS 25.0%
!! AAATTTGAAGAATCGGTTTA+TGG + chr5_3:54996261-54996280 Msa0818890:CDS 25.0%
! GTTATAGTGCAAATTTGAAT+TGG + chr5_3:54996283-54996302 Msa0818890:CDS 25.0%
! AATTAATTAACCCTAAGTCT+TGG + chr5_3:54996364-54996383 Msa0818890:CDS 25.0%
! CTTATTTGCCTAATAAGTAT+AGG + chr5_3:54996544-54996563 Msa0818890:CDS 25.0%
! TAGAATGTCCTATACTTATT+AGG - chr5_3:54996555-54996574 None:intergenic 25.0%
!! AATAGCAAAAGAGAGTTTTT+GGG - chr5_3:54994571-54994590 None:intergenic 25.0%
!! TCATGTGATATTTTATTGCT+AGG - chr5_3:54994645-54994664 None:intergenic 25.0%
! ATTAACAAGGAGATTTGAAA+TGG - chr5_3:54994673-54994692 None:intergenic 25.0%
! TGTCTTGTATGAAATTAACA+AGG - chr5_3:54994686-54994705 None:intergenic 25.0%
! ATACAAGACATCCTTAATTA+TGG + chr5_3:54994696-54994715 Msa0818890:CDS 25.0%
!!! TTTGGAATAGTTTCAAGTTT+TGG - chr5_3:54994759-54994778 None:intergenic 25.0%
! TTGAAAATGTCACTAAAGTT+TGG - chr5_3:54994777-54994796 None:intergenic 25.0%
! ATAAGAGAGTTAAAAAAGCA+AGG - chr5_3:54994800-54994819 None:intergenic 25.0%
!! GAAACTATTAGGTTCTAATT+TGG + chr5_3:54994929-54994948 Msa0818890:CDS 25.0%
!!! TTAACCTTGCTATTACAAAT+TGG + chr5_3:54994973-54994992 Msa0818890:CDS 25.0%
!!! TCTTATGCTTTTTCAACATT+TGG + chr5_3:54995062-54995081 Msa0818890:CDS 25.0%
!!! CTTATGCTTTTTCAACATTT+GGG + chr5_3:54995063-54995082 Msa0818890:CDS 25.0%
! GTATTGTCCTCTTATAAATA+TGG + chr5_3:54995103-54995122 Msa0818890:CDS 25.0%
! ACAACATCCATATTTATAAG+AGG - chr5_3:54995113-54995132 None:intergenic 25.0%
!!! AAAAAACCTTTTAGGTTTGA+TGG - chr5_3:54995354-54995373 None:intergenic 25.0%
!!! CTTTGTTTGGATCTTTTTAA+TGG - chr5_3:54995435-54995454 None:intergenic 25.0%
! CATTAAAAAGATCCAAACAA+AGG + chr5_3:54995433-54995452 Msa0818890:intron 25.0%
!!! AGTTTTTTTACTCCTTTGTT+TGG - chr5_3:54995448-54995467 None:intergenic 25.0%
! AGAAAACAAAACAAAAGAGA+GGG - chr5_3:54995734-54995753 None:intergenic 25.0%
! AAGAAAACAAAACAAAAGAG+AGG - chr5_3:54995735-54995754 None:intergenic 25.0%
!!! TCTTAATGTTTGTTGAGTTT+TGG + chr5_3:54995751-54995770 Msa0818890:intron 25.0%
! ATACTCGTTGTACTTAAATT+TGG + chr5_3:54995784-54995803 Msa0818890:intron 25.0%
! TACTCGTTGTACTTAAATTT+GGG + chr5_3:54995785-54995804 Msa0818890:intron 25.0%
!! GAAAATCCAATAATGGAAAT+AGG + chr5_3:54996138-54996157 Msa0818890:CDS 25.0%
!! AAATTTGAAGAATCGGTTTA+TGG + chr5_3:54996261-54996280 Msa0818890:CDS 25.0%
! GTTATAGTGCAAATTTGAAT+TGG + chr5_3:54996283-54996302 Msa0818890:CDS 25.0%
! AATTAATTAACCCTAAGTCT+TGG + chr5_3:54996364-54996383 Msa0818890:CDS 25.0%
! CTTATTTGCCTAATAAGTAT+AGG + chr5_3:54996544-54996563 Msa0818890:CDS 25.0%
! TAGAATGTCCTATACTTATT+AGG - chr5_3:54996555-54996574 None:intergenic 25.0%
! AAACTCTTGATGTGTTTTCA+TGG + chr5_3:54994427-54994446 Msa0818890:CDS 30.0%
! AACTCTTGATGTGTTTTCAT+GGG + chr5_3:54994428-54994447 Msa0818890:CDS 30.0%
TAGCAATGAACATAAGCTTA+AGG - chr5_3:54994499-54994518 None:intergenic 30.0%
GATATGGTAAGATTAAGTGA+TGG - chr5_3:54994534-54994553 None:intergenic 30.0%
! CAATAGCAAAAGAGAGTTTT+TGG - chr5_3:54994572-54994591 None:intergenic 30.0%
!!! AAAACTCTCTTTTGCTATTG+TGG + chr5_3:54994572-54994591 Msa0818890:CDS 30.0%
TTGAGGTCCAAAGAAAAATA+GGG - chr5_3:54994611-54994630 None:intergenic 30.0%
! TTTGAGGTCCAAAGAAAAAT+AGG - chr5_3:54994612-54994631 None:intergenic 30.0%
GCATTAAAGGAACAATTATC+AGG + chr5_3:54994873-54994892 Msa0818890:CDS 30.0%
! ACGTTGTTGATGAAACTATT+AGG + chr5_3:54994918-54994937 Msa0818890:CDS 30.0%
GTTCTAATTTGGAAGAAAAG+TGG + chr5_3:54994940-54994959 Msa0818890:CDS 30.0%
CAATCCAATTTGTAATAGCA+AGG - chr5_3:54994980-54994999 None:intergenic 30.0%
TGCTATTACAAATTGGATTG+TGG + chr5_3:54994980-54994999 Msa0818890:CDS 30.0%
GCATAAGAAAATAAAGGAGA+TGG - chr5_3:54995050-54995069 None:intergenic 30.0%
CTCAAATATCAACAACTTGA+AGG + chr5_3:54995176-54995195 Msa0818890:CDS 30.0%
TTTCTTTGATAAAGGCTTTG+TGG - chr5_3:54995217-54995236 None:intergenic 30.0%
AAGCCTTTATCAAAGAAAAG+TGG + chr5_3:54995219-54995238 Msa0818890:CDS 30.0%
AGCCTTTATCAAAGAAAAGT+GGG + chr5_3:54995220-54995239 Msa0818890:CDS 30.0%
ATGTTTCCATCAAACCTAAA+AGG + chr5_3:54995345-54995364 Msa0818890:intron 30.0%
! TGGATCTTTTTAATGGCAAA+TGG - chr5_3:54995428-54995447 None:intergenic 30.0%
!!! TAAATTTTTTTGGTAGTGGC+CGG + chr5_3:54995527-54995546 Msa0818890:intron 30.0%
ATGCATAATATATGCAAGGT+CGG - chr5_3:54995562-54995581 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - chr5_3:54995566-54995585 None:intergenic 30.0%
!! TTGTACTTAAATTTGGGTTG+TGG + chr5_3:54995791-54995810 Msa0818890:intron 30.0%
!! TGTACTTAAATTTGGGTTGT+GGG + chr5_3:54995792-54995811 Msa0818890:intron 30.0%
GTTGCAATGATATTCTTGAT+GGG - chr5_3:54996065-54996084 None:intergenic 30.0%
AGTTGCAATGATATTCTTGA+TGG - chr5_3:54996066-54996085 None:intergenic 30.0%
ATACACTTAAGACTTGATGT+TGG - chr5_3:54996101-54996120 None:intergenic 30.0%
!! ATTTTCTGAGGATTTTCCAA+CGG - chr5_3:54996124-54996143 None:intergenic 30.0%
ATCCTCAGAAAATCCAATAA+TGG + chr5_3:54996131-54996150 Msa0818890:CDS 30.0%
! TTCCATTATTGGATTTTCTG+AGG - chr5_3:54996136-54996155 None:intergenic 30.0%
TTGGTTTCTTCATGATAGTA+TGG + chr5_3:54996302-54996321 Msa0818890:CDS 30.0%
TTTCTTCATGATAGTATGGA+TGG + chr5_3:54996306-54996325 Msa0818890:CDS 30.0%
TATCTCTAAACCAAGACTTA+GGG - chr5_3:54996377-54996396 None:intergenic 30.0%
!! ATTTTTGCTGGTGATGAATA+TGG + chr5_3:54996441-54996460 Msa0818890:CDS 30.0%
!! AAAGTTGATAAAAGTGCTAG+AGG + chr5_3:54996480-54996499 Msa0818890:CDS 30.0%
!! AAGTTGATAAAAGTGCTAGA+GGG + chr5_3:54996481-54996500 Msa0818890:CDS 30.0%
AGATTATGGAATGGGAAATT+AGG + chr5_3:54996505-54996524 Msa0818890:CDS 30.0%
GATTATGGAATGGGAAATTA+GGG + chr5_3:54996506-54996525 Msa0818890:CDS 30.0%
ATTATGGAATGGGAAATTAG+GGG + chr5_3:54996507-54996526 Msa0818890:CDS 30.0%
TAAGCTAAGGAATATTGAGA+TGG - chr5_3:54996614-54996633 None:intergenic 30.0%
ATCTCAATATTCCTTAGCTT+AGG + chr5_3:54996613-54996632 Msa0818890:exon 30.0%
! AAACTCTTGATGTGTTTTCA+TGG + chr5_3:54994427-54994446 Msa0818890:CDS 30.0%
! AACTCTTGATGTGTTTTCAT+GGG + chr5_3:54994428-54994447 Msa0818890:CDS 30.0%
TAGCAATGAACATAAGCTTA+AGG - chr5_3:54994499-54994518 None:intergenic 30.0%
GATATGGTAAGATTAAGTGA+TGG - chr5_3:54994534-54994553 None:intergenic 30.0%
! CAATAGCAAAAGAGAGTTTT+TGG - chr5_3:54994572-54994591 None:intergenic 30.0%
!!! AAAACTCTCTTTTGCTATTG+TGG + chr5_3:54994572-54994591 Msa0818890:CDS 30.0%
TTGAGGTCCAAAGAAAAATA+GGG - chr5_3:54994611-54994630 None:intergenic 30.0%
! TTTGAGGTCCAAAGAAAAAT+AGG - chr5_3:54994612-54994631 None:intergenic 30.0%
GCATTAAAGGAACAATTATC+AGG + chr5_3:54994873-54994892 Msa0818890:CDS 30.0%
! ACGTTGTTGATGAAACTATT+AGG + chr5_3:54994918-54994937 Msa0818890:CDS 30.0%
GTTCTAATTTGGAAGAAAAG+TGG + chr5_3:54994940-54994959 Msa0818890:CDS 30.0%
CAATCCAATTTGTAATAGCA+AGG - chr5_3:54994980-54994999 None:intergenic 30.0%
TGCTATTACAAATTGGATTG+TGG + chr5_3:54994980-54994999 Msa0818890:CDS 30.0%
GCATAAGAAAATAAAGGAGA+TGG - chr5_3:54995050-54995069 None:intergenic 30.0%
CTCAAATATCAACAACTTGA+AGG + chr5_3:54995176-54995195 Msa0818890:CDS 30.0%
TTTCTTTGATAAAGGCTTTG+TGG - chr5_3:54995217-54995236 None:intergenic 30.0%
AAGCCTTTATCAAAGAAAAG+TGG + chr5_3:54995219-54995238 Msa0818890:CDS 30.0%
AGCCTTTATCAAAGAAAAGT+GGG + chr5_3:54995220-54995239 Msa0818890:CDS 30.0%
ATGTTTCCATCAAACCTAAA+AGG + chr5_3:54995345-54995364 Msa0818890:intron 30.0%
! TGGATCTTTTTAATGGCAAA+TGG - chr5_3:54995428-54995447 None:intergenic 30.0%
!!! TAAATTTTTTTGGTAGTGGC+CGG + chr5_3:54995527-54995546 Msa0818890:intron 30.0%
ATGCATAATATATGCAAGGT+CGG - chr5_3:54995562-54995581 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - chr5_3:54995566-54995585 None:intergenic 30.0%
!! TTGTACTTAAATTTGGGTTG+TGG + chr5_3:54995791-54995810 Msa0818890:intron 30.0%
!! TGTACTTAAATTTGGGTTGT+GGG + chr5_3:54995792-54995811 Msa0818890:intron 30.0%
GTTGCAATGATATTCTTGAT+GGG - chr5_3:54996065-54996084 None:intergenic 30.0%
AGTTGCAATGATATTCTTGA+TGG - chr5_3:54996066-54996085 None:intergenic 30.0%
ATACACTTAAGACTTGATGT+TGG - chr5_3:54996101-54996120 None:intergenic 30.0%
!! ATTTTCTGAGGATTTTCCAA+CGG - chr5_3:54996124-54996143 None:intergenic 30.0%
ATCCTCAGAAAATCCAATAA+TGG + chr5_3:54996131-54996150 Msa0818890:CDS 30.0%
! TTCCATTATTGGATTTTCTG+AGG - chr5_3:54996136-54996155 None:intergenic 30.0%
TTGGTTTCTTCATGATAGTA+TGG + chr5_3:54996302-54996321 Msa0818890:CDS 30.0%
TTTCTTCATGATAGTATGGA+TGG + chr5_3:54996306-54996325 Msa0818890:CDS 30.0%
TATCTCTAAACCAAGACTTA+GGG - chr5_3:54996377-54996396 None:intergenic 30.0%
!! ATTTTTGCTGGTGATGAATA+TGG + chr5_3:54996441-54996460 Msa0818890:CDS 30.0%
!! AAAGTTGATAAAAGTGCTAG+AGG + chr5_3:54996480-54996499 Msa0818890:CDS 30.0%
!! AAGTTGATAAAAGTGCTAGA+GGG + chr5_3:54996481-54996500 Msa0818890:CDS 30.0%
AGATTATGGAATGGGAAATT+AGG + chr5_3:54996505-54996524 Msa0818890:CDS 30.0%
GATTATGGAATGGGAAATTA+GGG + chr5_3:54996506-54996525 Msa0818890:CDS 30.0%
ATTATGGAATGGGAAATTAG+GGG + chr5_3:54996507-54996526 Msa0818890:CDS 30.0%
TAAGCTAAGGAATATTGAGA+TGG - chr5_3:54996614-54996633 None:intergenic 30.0%
ATCTCAATATTCCTTAGCTT+AGG + chr5_3:54996613-54996632 Msa0818890:exon 30.0%
! CATAGAACCTGTTTTCCATT+CGG - chr5_3:54994475-54994494 None:intergenic 35.0%
!!! GGATTGGTGGTTTTTTGATA+TGG - chr5_3:54994550-54994569 None:intergenic 35.0%
!!! CAAAAGAGAGTTTTTGGGAT+TGG - chr5_3:54994566-54994585 None:intergenic 35.0%
!! GCTAGGTTTTAATGGTTTTG+AGG - chr5_3:54994628-54994647 None:intergenic 35.0%
TTGCATTTATGAAGCTCCTT+CGG + chr5_3:54994827-54994846 Msa0818890:CDS 35.0%
TGGGTGTCTTAATGCATTAA+AGG + chr5_3:54994860-54994879 Msa0818890:CDS 35.0%
!!! ATGCTTTTTCAACATTTGGG+TGG + chr5_3:54995066-54995085 Msa0818890:CDS 35.0%
!! GACCCACTTTTCTTTGATAA+AGG - chr5_3:54995225-54995244 None:intergenic 35.0%
TGGTGAACATTGACAACATA+AGG + chr5_3:54995252-54995271 Msa0818890:CDS 35.0%
!!! AAATTTTTTTGGTAGTGGCC+GGG + chr5_3:54995528-54995547 Msa0818890:intron 35.0%
TGCATAATATATGCAAGGTC+GGG - chr5_3:54995561-54995580 None:intergenic 35.0%
GTTCGTGTATGTATTACAAG+TGG + chr5_3:54995700-54995719 Msa0818890:intron 35.0%
AGCTCCTCTTTCATTCATAA+GGG - chr5_3:54996022-54996041 None:intergenic 35.0%
! TCCAATAATGGAAATAGGCA+TGG + chr5_3:54996143-54996162 Msa0818890:CDS 35.0%
TCCATGCCTATTTCCATTAT+TGG - chr5_3:54996147-54996166 None:intergenic 35.0%
AACCAACAAATCCCTACATA+GGG + chr5_3:54996190-54996209 Msa0818890:CDS 35.0%
!! AGGCTTTAAACTCATTGTTG+TGG - chr5_3:54996238-54996257 None:intergenic 35.0%
! CAACAATGAGTTTAAAGCCT+TGG + chr5_3:54996238-54996257 Msa0818890:CDS 35.0%
GCCTTGGAAATTTGAAGAAT+CGG + chr5_3:54996254-54996273 Msa0818890:CDS 35.0%
! ACCGATTCTTCAAATTTCCA+AGG - chr5_3:54996258-54996277 None:intergenic 35.0%
CTATCTCTAAACCAAGACTT+AGG - chr5_3:54996378-54996397 None:intergenic 35.0%
CTAAGTCTTGGTTTAGAGAT+AGG + chr5_3:54996376-54996395 Msa0818890:CDS 35.0%
! TATCGTCCTTTTACTAGACA+AGG + chr5_3:54996411-54996430 Msa0818890:CDS 35.0%
! AATATGGAGAAAGTGTGTGT+TGG + chr5_3:54996457-54996476 Msa0818890:CDS 35.0%
TAGAGGGAAGATTATGGAAT+GGG + chr5_3:54996497-54996516 Msa0818890:CDS 35.0%
! CATAGAACCTGTTTTCCATT+CGG - chr5_3:54994475-54994494 None:intergenic 35.0%
!!! GGATTGGTGGTTTTTTGATA+TGG - chr5_3:54994550-54994569 None:intergenic 35.0%
!!! CAAAAGAGAGTTTTTGGGAT+TGG - chr5_3:54994566-54994585 None:intergenic 35.0%
!! GCTAGGTTTTAATGGTTTTG+AGG - chr5_3:54994628-54994647 None:intergenic 35.0%
TTGCATTTATGAAGCTCCTT+CGG + chr5_3:54994827-54994846 Msa0818890:CDS 35.0%
TGGGTGTCTTAATGCATTAA+AGG + chr5_3:54994860-54994879 Msa0818890:CDS 35.0%
!!! ATGCTTTTTCAACATTTGGG+TGG + chr5_3:54995066-54995085 Msa0818890:CDS 35.0%
!! GACCCACTTTTCTTTGATAA+AGG - chr5_3:54995225-54995244 None:intergenic 35.0%
TGGTGAACATTGACAACATA+AGG + chr5_3:54995252-54995271 Msa0818890:CDS 35.0%
!!! AAATTTTTTTGGTAGTGGCC+GGG + chr5_3:54995528-54995547 Msa0818890:intron 35.0%
TGCATAATATATGCAAGGTC+GGG - chr5_3:54995561-54995580 None:intergenic 35.0%
GTTCGTGTATGTATTACAAG+TGG + chr5_3:54995700-54995719 Msa0818890:intron 35.0%
AGCTCCTCTTTCATTCATAA+GGG - chr5_3:54996022-54996041 None:intergenic 35.0%
! TCCAATAATGGAAATAGGCA+TGG + chr5_3:54996143-54996162 Msa0818890:CDS 35.0%
TCCATGCCTATTTCCATTAT+TGG - chr5_3:54996147-54996166 None:intergenic 35.0%
AACCAACAAATCCCTACATA+GGG + chr5_3:54996190-54996209 Msa0818890:CDS 35.0%
!! AGGCTTTAAACTCATTGTTG+TGG - chr5_3:54996238-54996257 None:intergenic 35.0%
! CAACAATGAGTTTAAAGCCT+TGG + chr5_3:54996238-54996257 Msa0818890:CDS 35.0%
GCCTTGGAAATTTGAAGAAT+CGG + chr5_3:54996254-54996273 Msa0818890:CDS 35.0%
! ACCGATTCTTCAAATTTCCA+AGG - chr5_3:54996258-54996277 None:intergenic 35.0%
CTATCTCTAAACCAAGACTT+AGG - chr5_3:54996378-54996397 None:intergenic 35.0%
CTAAGTCTTGGTTTAGAGAT+AGG + chr5_3:54996376-54996395 Msa0818890:CDS 35.0%
! TATCGTCCTTTTACTAGACA+AGG + chr5_3:54996411-54996430 Msa0818890:CDS 35.0%
! AATATGGAGAAAGTGTGTGT+TGG + chr5_3:54996457-54996476 Msa0818890:CDS 35.0%
TAGAGGGAAGATTATGGAAT+GGG + chr5_3:54996497-54996516 Msa0818890:CDS 35.0%
ATCTTCCACCAATATCCGAA+TGG + chr5_3:54994457-54994476 Msa0818890:CDS 40.0%
! GTTTTCCATTCGGATATTGG+TGG - chr5_3:54994465-54994484 None:intergenic 40.0%
! CCTGTTTTCCATTCGGATAT+TGG - chr5_3:54994468-54994487 None:intergenic 40.0%
CCAATATCCGAATGGAAAAC+AGG + chr5_3:54994465-54994484 Msa0818890:CDS 40.0%
!!! AAGAGAGTTTTTGGGATTGG+TGG - chr5_3:54994563-54994582 None:intergenic 40.0%
!!! CTTTTTCAACATTTGGGTGG+TGG + chr5_3:54995069-54995088 Msa0818890:CDS 40.0%
AGAAAAGTGGGTCGAAATCA+TGG + chr5_3:54995232-54995251 Msa0818890:CDS 40.0%
!!! AATTTTTTTGGTAGTGGCCG+GGG + chr5_3:54995529-54995548 Msa0818890:intron 40.0%
GACACCCTTATGAATGAAAG+AGG + chr5_3:54996015-54996034 Msa0818890:CDS 40.0%
CAGCTCCTCTTTCATTCATA+AGG - chr5_3:54996023-54996042 None:intergenic 40.0%
CTTATGAATGAAAGAGGAGC+TGG + chr5_3:54996021-54996040 Msa0818890:CDS 40.0%
AAGACTTGATGTTGGAGTGT+TGG - chr5_3:54996093-54996112 None:intergenic 40.0%
CAAGTCTTAAGTGTATCCGT+TGG + chr5_3:54996105-54996124 Msa0818890:CDS 40.0%
CAACCAACAAATCCCTACAT+AGG + chr5_3:54996189-54996208 Msa0818890:CDS 40.0%
! GTCCTTTTACTAGACAAGGT+GGG + chr5_3:54996415-54996434 Msa0818890:CDS 40.0%
! TCCTTTTACTAGACAAGGTG+GGG + chr5_3:54996416-54996435 Msa0818890:CDS 40.0%
AAGTGCTAGAGGGAAGATTA+TGG + chr5_3:54996491-54996510 Msa0818890:CDS 40.0%
CTAGAGGGAAGATTATGGAA+TGG + chr5_3:54996496-54996515 Msa0818890:CDS 40.0%
GGACATTCTACCATGAAACT+AGG + chr5_3:54996565-54996584 Msa0818890:CDS 40.0%
CATTCTACCATGAAACTAGG+AGG + chr5_3:54996568-54996587 Msa0818890:CDS 40.0%
AAACTAGGAGGTTGGAGTTT+AGG + chr5_3:54996580-54996599 Msa0818890:CDS 40.0%
AACTAGGAGGTTGGAGTTTA+GGG + chr5_3:54996581-54996600 Msa0818890:CDS 40.0%
TCTGCGTTATTCCTAAGCTA+AGG - chr5_3:54996627-54996646 None:intergenic 40.0%
ATCTTCCACCAATATCCGAA+TGG + chr5_3:54994457-54994476 Msa0818890:CDS 40.0%
! GTTTTCCATTCGGATATTGG+TGG - chr5_3:54994465-54994484 None:intergenic 40.0%
! CCTGTTTTCCATTCGGATAT+TGG - chr5_3:54994468-54994487 None:intergenic 40.0%
CCAATATCCGAATGGAAAAC+AGG + chr5_3:54994465-54994484 Msa0818890:CDS 40.0%
!!! AAGAGAGTTTTTGGGATTGG+TGG - chr5_3:54994563-54994582 None:intergenic 40.0%
!!! CTTTTTCAACATTTGGGTGG+TGG + chr5_3:54995069-54995088 Msa0818890:CDS 40.0%
AGAAAAGTGGGTCGAAATCA+TGG + chr5_3:54995232-54995251 Msa0818890:CDS 40.0%
!!! AATTTTTTTGGTAGTGGCCG+GGG + chr5_3:54995529-54995548 Msa0818890:intron 40.0%
GACACCCTTATGAATGAAAG+AGG + chr5_3:54996015-54996034 Msa0818890:CDS 40.0%
CAGCTCCTCTTTCATTCATA+AGG - chr5_3:54996023-54996042 None:intergenic 40.0%
CTTATGAATGAAAGAGGAGC+TGG + chr5_3:54996021-54996040 Msa0818890:CDS 40.0%
AAGACTTGATGTTGGAGTGT+TGG - chr5_3:54996093-54996112 None:intergenic 40.0%
CAAGTCTTAAGTGTATCCGT+TGG + chr5_3:54996105-54996124 Msa0818890:CDS 40.0%
CAACCAACAAATCCCTACAT+AGG + chr5_3:54996189-54996208 Msa0818890:CDS 40.0%
! GTCCTTTTACTAGACAAGGT+GGG + chr5_3:54996415-54996434 Msa0818890:CDS 40.0%
! TCCTTTTACTAGACAAGGTG+GGG + chr5_3:54996416-54996435 Msa0818890:CDS 40.0%
AAGTGCTAGAGGGAAGATTA+TGG + chr5_3:54996491-54996510 Msa0818890:CDS 40.0%
CTAGAGGGAAGATTATGGAA+TGG + chr5_3:54996496-54996515 Msa0818890:CDS 40.0%
GGACATTCTACCATGAAACT+AGG + chr5_3:54996565-54996584 Msa0818890:CDS 40.0%
CATTCTACCATGAAACTAGG+AGG + chr5_3:54996568-54996587 Msa0818890:CDS 40.0%
AAACTAGGAGGTTGGAGTTT+AGG + chr5_3:54996580-54996599 Msa0818890:CDS 40.0%
AACTAGGAGGTTGGAGTTTA+GGG + chr5_3:54996581-54996600 Msa0818890:CDS 40.0%
TCTGCGTTATTCCTAAGCTA+AGG - chr5_3:54996627-54996646 None:intergenic 40.0%
CTCCTTCGGATCTTCGTTAT+GGG + chr5_3:54994841-54994860 Msa0818890:CDS 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG - chr5_3:54995588-54995607 None:intergenic 45.0%
AGCCCTATGTAGGGATTTGT+TGG - chr5_3:54996195-54996214 None:intergenic 45.0%
GATACGTTGAGCCCTATGTA+GGG - chr5_3:54996204-54996223 None:intergenic 45.0%
TGATACGTTGAGCCCTATGT+AGG - chr5_3:54996205-54996224 None:intergenic 45.0%
! CGTCCTTTTACTAGACAAGG+TGG + chr5_3:54996414-54996433 Msa0818890:CDS 45.0%
ACCCCACCTTGTCTAGTAAA+AGG - chr5_3:54996420-54996439 None:intergenic 45.0%
!!! CAAGGTGGGGTTATTTTTGC+TGG + chr5_3:54996429-54996448 Msa0818890:CDS 45.0%
TGGAATGGGAAATTAGGGGT+TGG + chr5_3:54996511-54996530 Msa0818890:CDS 45.0%
GGGAAATTAGGGGTTGGATA+TGG + chr5_3:54996517-54996536 Msa0818890:CDS 45.0%
CTACCATGAAACTAGGAGGT+TGG + chr5_3:54996572-54996591 Msa0818890:CDS 45.0%
ACTCCAACCTCCTAGTTTCA+TGG - chr5_3:54996578-54996597 None:intergenic 45.0%
CTCCTTCGGATCTTCGTTAT+GGG + chr5_3:54994841-54994860 Msa0818890:CDS 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG - chr5_3:54995588-54995607 None:intergenic 45.0%
AGCCCTATGTAGGGATTTGT+TGG - chr5_3:54996195-54996214 None:intergenic 45.0%
GATACGTTGAGCCCTATGTA+GGG - chr5_3:54996204-54996223 None:intergenic 45.0%
TGATACGTTGAGCCCTATGT+AGG - chr5_3:54996205-54996224 None:intergenic 45.0%
! CGTCCTTTTACTAGACAAGG+TGG + chr5_3:54996414-54996433 Msa0818890:CDS 45.0%
ACCCCACCTTGTCTAGTAAA+AGG - chr5_3:54996420-54996439 None:intergenic 45.0%
!!! CAAGGTGGGGTTATTTTTGC+TGG + chr5_3:54996429-54996448 Msa0818890:CDS 45.0%
TGGAATGGGAAATTAGGGGT+TGG + chr5_3:54996511-54996530 Msa0818890:CDS 45.0%
GGGAAATTAGGGGTTGGATA+TGG + chr5_3:54996517-54996536 Msa0818890:CDS 45.0%
CTACCATGAAACTAGGAGGT+TGG + chr5_3:54996572-54996591 Msa0818890:CDS 45.0%
ACTCCAACCTCCTAGTTTCA+TGG - chr5_3:54996578-54996597 None:intergenic 45.0%
GCTCCTTCGGATCTTCGTTA+TGG + chr5_3:54994840-54994859 Msa0818890:CDS 50.0%
CACCCATAACGAAGATCCGA+AGG - chr5_3:54994846-54994865 None:intergenic 50.0%
GAAGTCTCTCATCAGCTGCA+TGG - chr5_3:54995148-54995167 None:intergenic 50.0%
ATAGGGCTCAACGTATCAGC+TGG + chr5_3:54996207-54996226 Msa0818890:CDS 50.0%
GCTCCTTCGGATCTTCGTTA+TGG + chr5_3:54994840-54994859 Msa0818890:CDS 50.0%
CACCCATAACGAAGATCCGA+AGG - chr5_3:54994846-54994865 None:intergenic 50.0%
GAAGTCTCTCATCAGCTGCA+TGG - chr5_3:54995148-54995167 None:intergenic 50.0%
ATAGGGCTCAACGTATCAGC+TGG + chr5_3:54996207-54996226 Msa0818890:CDS 50.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr5_3:54995593-54995612 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr5_3:54995590-54995609 Msa0818890:intron 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr5_3:54995593-54995612 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr5_3:54995590-54995609 Msa0818890:intron 55.0%
GCAAGGTCGGGTTCGAACCC+CGG - chr5_3:54995549-54995568 None:intergenic 65.0%
GCAAGGTCGGGTTCGAACCC+CGG - chr5_3:54995549-54995568 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 54994414 54996646 54994414 ID=Msa0818890;Name=Msa0818890
chr5_3 mRNA 54994414 54996646 54994414 ID=Msa0818890-mRNA-1;Parent=Msa0818890;Name=Msa0818890-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.5|1|1|1|2|17|499
chr5_3 exon 54994414 54995273 54994414 ID=Msa0818890-mRNA-1:exon:16661;Parent=Msa0818890-mRNA-1
chr5_3 exon 54995990 54996646 54995990 ID=Msa0818890-mRNA-1:exon:16662;Parent=Msa0818890-mRNA-1
chr5_3 CDS 54994414 54995273 54994414 ID=Msa0818890-mRNA-1:cds;Parent=Msa0818890-mRNA-1
chr5_3 CDS 54995990 54996629 54995990 ID=Msa0818890-mRNA-1:cds;Parent=Msa0818890-mRNA-1
chr5_3 three_prime_UTR 54996630 54996646 54996630 ID=Msa0818890-mRNA-1:three_prime_utr;Parent=Msa0818890-mRNA-1
Gene Sequence

>Msa0818890

ATGGCTTATTGCAAAACTCTTGATGTGTTTTCATGGGTTCAAAATCTTCCACCAATATCCGAATGGAAAACAGGTTCTATGTCCTTAAGCTTATGTTCATTGCTAAACTCATCTCAACCATCACTTAATCTTACCATATCAAAAAACCACCAATCCCAAAAACTCTCTTTTGCTATTGTGGCAGATTATAATATCCCTATTTTTCTTTGGACCTCAAAACCATTAAAACCTAGCAATAAAATATCACATGAAGAAACCATTTCAAATCTCCTTGTTAATTTCATACAAGACATCCTTAATTATGGTTCAAAAAATAATTACAATAGTCTCTTCATTAAATTTCCAAAACTTGAAACTATTCCAAACTTTAGTGACATTTTCAACCTTGCTTTTTTAACTCTCTTATTCTTGGTTTGCATTTATGAAGCTCCTTCGGATCTTCGTTATGGGTGTCTTAATGCATTAAAGGAACAATTATCAGGTTTTGAATCAAGAAAATCGTCAACGTTGTTGATGAAACTATTAGGTTCTAATTTGGAAGAAAAGTGGATGCGTTCTATTAACCTTGCTATTACAAATTGGATTGTGGAATTAAAAGAAGTAGCTAAACATCATTATAGCATGTTTAGAACACCATCTCCTTTATTTTCTTATGCTTTTTCAACATTTGGGTGGTGGAAAGTTCAATTGTATTGTCCTCTTATAAATATGGATGTTGTTAGTGCTAACAACCATGCAGCTGATGAGAGACTTCAATTCTCTCTCAAATATCAACAACTTGAAGGTGTTCTTCAATTCAACCACAAAGCCTTTATCAAAGAAAAGTGGGTCGAAATCATGGTGAACATTGACAACATAAGATGTGATGTTTTCAAACTAGTAGATGACACCCTTATGAATGAAAGAGGAGCTGGTGCATCTGAAAAATATTTCCCATCAAGAATATCATTGCAACTCACTCCAACACTCCAACATCAAGTCTTAAGTGTATCCGTTGGAAAATCCTCAGAAAATCCAATAATGGAAATAGGCATGGAAAAAAGTGTAGAAGCTTCATTTCAACCAACAAATCCCTACATAGGGCTCAACGTATCAGCTGGAGAATCCACAACAATGAGTTTAAAGCCTTGGAAATTTGAAGAATCGGTTTATGGTTATAGTGCAAATTTGAATTGGTTTCTTCATGATAGTATGGATGGCAAAGAAGTCTTTTCAACAAAGCCATCAAAATTTGAATTAATTAACCCTAAGTCTTGGTTTAGAGATAGGTATTCAAGTGCTTATCGTCCTTTTACTAGACAAGGTGGGGTTATTTTTGCTGGTGATGAATATGGAGAAAGTGTGTGTTGGAAAGTTGATAAAAGTGCTAGAGGGAAGATTATGGAATGGGAAATTAGGGGTTGGATATGGTTAACTTATTTGCCTAATAAGTATAGGACATTCTACCATGAAACTAGGAGGTTGGAGTTTAGGGAAATTGTCCATCTCAATATTCCTTAG

Protein sequence

>Msa0818890

MAYCKTLDVFSWVQNLPPISEWKTGSMSLSLCSLLNSSQPSLNLTISKNHQSQKLSFAIVADYNIPIFLWTSKPLKPSNKISHEETISNLLVNFIQDILNYGSKNNYNSLFIKFPKLETIPNFSDIFNLAFLTLLFLVCIYEAPSDLRYGCLNALKEQLSGFESRKSSTLLMKLLGSNLEEKWMRSINLAITNWIVELKEVAKHHYSMFRTPSPLFSYAFSTFGWWKVQLYCPLINMDVVSANNHAADERLQFSLKYQQLEGVLQFNHKAFIKEKWVEIMVNIDNIRCDVFKLVDDTLMNERGAGASEKYFPSRISLQLTPTLQHQVLSVSVGKSSENPIMEIGMEKSVEASFQPTNPYIGLNVSAGESTTMSLKPWKFEESVYGYSANLNWFLHDSMDGKEVFSTKPSKFELINPKSWFRDRYSSAYRPFTRQGGVIFAGDEYGESVCWKVDKSARGKIMEWEIRGWIWLTYLPNKYRTFYHETRRLEFREIVHLNIP*