AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0303520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0303520 MtrunA17_Chr2g0330411 99.647 283 1 0 1 283 1 283 0.0 575
Msa0303520 MtrunA17_Chr2g0308551 36.842 285 138 5 13 255 1 285 7.76e-49 164
Msa0303520 MtrunA17_Chr7g0221311 36.859 312 162 9 1 281 1 308 4.14e-47 162
Msa0303520 MtrunA17_Chr4g0073281 35.065 231 149 1 32 262 1 230 1.15e-40 142
Msa0303520 MtrunA17_Chr5g0431341 31.224 237 152 5 44 270 37 272 1.97e-35 128
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0303520 AT1G55170.1 51.049 286 132 4 1 282 1 282 1.77e-86 260
Msa0303520 AT3G14750.1 38.696 230 131 3 37 257 63 291 1.73e-46 159
Msa0303520 AT1G67170.2 38.647 207 127 0 33 239 47 253 5.67e-42 148
Msa0303520 AT1G67170.1 38.647 207 127 0 33 239 47 253 5.67e-42 148
Msa0303520 AT2G30120.5 26.957 230 154 1 42 257 37 266 2.59e-21 91.7
Msa0303520 AT2G30120.4 26.754 228 153 1 42 255 37 264 6.04e-21 90.1
Msa0303520 AT2G30120.2 26.638 229 154 1 41 255 36 264 6.70e-21 90.5
Msa0303520 AT5G61920.3 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0303520 AT5G61920.5 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0303520 AT5G61920.2 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0303520 AT5G61920.6 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0303520 AT5G61920.1 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0303520 AT5G61920.4 28.902 173 123 0 49 221 17 189 1.55e-16 76.6
Msa0303520 AT2G30120.3 27.972 143 103 0 39 181 34 176 1.13e-11 62.8
Msa0303520 AT2G30120.1 27.972 143 103 0 39 181 34 176 1.64e-11 62.0
Msa0303520 AT2G30120.6 27.972 143 103 0 39 181 34 176 1.64e-11 62.0

Find 166 sgRNAs with CRISPR-Local

Find 523 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTCTTCAATTTCTAATT+AGG 0.149861 2_3:+60698572 Msa0303520:five_prime_UTR
CTACACTTAGTAATAAATTA+TGG 0.169256 2_3:-60704985 None:intergenic
GCAGAGAAAGGTCCTCTTTA+TGG 0.176094 2_3:+60700692 Msa0303520:CDS
TTGCCTTATGGAACAAATTT+TGG 0.192469 2_3:+60700523 Msa0303520:CDS
CGAAATGTTTCAACGTGTTT+TGG 0.209278 2_3:+60704852 Msa0303520:three_prime_UTR
CGCAAAATCTCGCAGCATTA+TGG 0.232507 2_3:-60704246 None:intergenic
AAACCGGGTGAAATGTATTA+TGG 0.235292 2_3:+60704304 Msa0303520:three_prime_UTR
ATTCATGCAGGTTTGCCTTA+TGG 0.235597 2_3:+60700511 Msa0303520:intron
AAACTATATGCATGATTAAA+TGG 0.243539 2_3:-60705064 None:intergenic
ATGGGGTGGGTACTGCTTCT+AGG 0.246552 2_3:+60700711 Msa0303520:CDS
CACTTACGAAAGATGTTTCT+AGG 0.253529 2_3:+60699449 Msa0303520:CDS
AGTATCAAACAAGAACTTTC+TGG 0.261139 2_3:+60699415 Msa0303520:CDS
AAAATTAAGCCACTAGGATT+TGG 0.264537 2_3:+60705139 Msa0303520:three_prime_UTR
AGTTTCTTGCACGCTCTATT+TGG 0.269956 2_3:+60704818 Msa0303520:three_prime_UTR
CAAAACACGTTGAAACATTT+CGG 0.287707 2_3:-60704851 None:intergenic
CTCTATGAAGTTCGGATTAT+AGG 0.291892 2_3:-60704907 None:intergenic
TAAAAGCTCTTTGAGTTATA+CGG 0.292488 2_3:-60698451 None:intergenic
TTGAGTTATACGGCGTCGTT+TGG 0.293424 2_3:-60698441 None:intergenic
TTGGAAATGAAAGCTTTAAA+AGG 0.310780 2_3:+60704429 Msa0303520:three_prime_UTR
CACGAAGTTTCTCAACTTCT+CGG 0.317894 2_3:-60699746 None:intergenic
GAGATAAAAGACCATTAAAA+TGG 0.326020 2_3:-60700859 None:intergenic
ACCTAGCACGCATCAGTTCT+TGG 0.336174 2_3:-60699528 None:intergenic
ACCTCATCCAGCATTGTTAG+AGG 0.338446 2_3:+60699120 Msa0303520:CDS
CCTCCATATGCAGATGGATA+TGG 0.340583 2_3:+60700568 Msa0303520:CDS
TCTTCCTACTCGCGTCTAAA+TGG 0.346507 2_3:-60705030 None:intergenic
CAGAGAAAGGTCCTCTTTAT+GGG 0.349670 2_3:+60700693 Msa0303520:CDS
ATTAGTTGAAAATGCAAAAC+CGG 0.350376 2_3:+60704288 Msa0303520:three_prime_UTR
TACACTTAGTAATAAATTAT+GGG 0.355432 2_3:-60704984 None:intergenic
TCAATGAGATCTGAGATTGA+TGG 0.370744 2_3:+60699499 Msa0303520:CDS
CAATCTAAAATTTGGAAATC+AGG 0.374042 2_3:-60704704 None:intergenic
GGAGGCTGGTGGCGGATAAC+AGG 0.382841 2_3:+60699173 Msa0303520:CDS
GCATTTGACATTTGAGTAGA+TGG 0.387169 2_3:+60704774 Msa0303520:three_prime_UTR
CTTCCGATGGATACCCTCTT+CGG 0.387777 2_3:-60699051 None:intergenic
CCCGCACGCTCTATGAAGTT+CGG 0.395759 2_3:-60704915 None:intergenic
GAAGGCAAACATGGAGTTCA+TGG 0.395776 2_3:+60699683 Msa0303520:CDS
AGAGCGTGCAAGAAACTCAT+AGG 0.399746 2_3:-60704812 None:intergenic
TTCAATTGGGTTGTCCTCCT+TGG 0.404053 2_3:+60704579 Msa0303520:three_prime_UTR
TGAGTTATACGGCGTCGTTT+GGG 0.409841 2_3:-60698440 None:intergenic
CTACCAAAATTTGTTCCATA+AGG 0.410355 2_3:-60700526 None:intergenic
AACCGGGTGAAATGTATTAT+GGG 0.424403 2_3:+60704305 Msa0303520:three_prime_UTR
TGAAGTTGGAGTCTGATCTT+AGG 0.426762 2_3:+60699332 Msa0303520:CDS
GGTGGTGGCCCGCGAGCATA+AGG 0.435456 2_3:-60699076 None:intergenic
TAGCATGGATGGAAGACATT+GGG 0.438242 2_3:+60699779 Msa0303520:CDS
TTTCTCAACTTCTCGGGCCA+TGG 0.443621 2_3:-60699739 None:intergenic
TTCCGATGGATACCCTCTTC+GGG 0.447941 2_3:-60699050 None:intergenic
AAACATCTTTCGTAAGTGTC+TGG 0.450505 2_3:-60699444 None:intergenic
CCGATGGTTTAATTGTGCTT+TGG 0.457270 2_3:+60704671 Msa0303520:three_prime_UTR
GTTTAGGCTGCTGCAGAGAA+AGG 0.464656 2_3:+60700680 Msa0303520:intron
GATGGAAGACATTGGGGAGC+TGG 0.465511 2_3:+60699786 Msa0303520:CDS
GTATCAAACAAGAACTTTCT+GGG 0.473347 2_3:+60699416 Msa0303520:CDS
TCAATCTCAGATCTCATTGA+AGG 0.475047 2_3:-60699496 None:intergenic
CTTACTATATGCTTTCAGCT+TGG 0.475286 2_3:+60704605 Msa0303520:three_prime_UTR
AGAGCGTGCGGGAAACTCAT+AGG 0.475766 2_3:+60704926 Msa0303520:three_prime_UTR
AATGAAAGCTTTAAAAGGTA+TGG 0.476327 2_3:+60704434 Msa0303520:three_prime_UTR
GCTGAGGGCAAGTAGGGCAC+AGG 0.477124 2_3:+60704327 Msa0303520:three_prime_UTR
GATAGTATGCATGAGGTCCT+AGG 0.482561 2_3:+60705161 Msa0303520:three_prime_UTR
ACGAAGTTTCTCAACTTCTC+GGG 0.483936 2_3:-60699745 None:intergenic
TACTTCGCTAACACAGCTAA+AGG 0.487483 2_3:-60700812 None:intergenic
AGCTCTTCCTCTAACAATGC+TGG 0.487736 2_3:-60699127 None:intergenic
CAAAACTAATTGTATGTTGG+TGG 0.493246 2_3:+60705212 Msa0303520:three_prime_UTR
AATGCACAAGCCCAACTAAA+GGG 0.494054 2_3:-60704756 None:intergenic
ACACCATATCCATCTGCATA+TGG 0.495250 2_3:-60700571 None:intergenic
AGCTTTCATTTCCAATCTCA+CGG 0.498392 2_3:-60704421 None:intergenic
AAATGCACAAGCCCAACTAA+AGG 0.500360 2_3:-60704757 None:intergenic
GCGAGACCTTGCAGCTGCGA+AGG 0.508426 2_3:+60699225 Msa0303520:CDS
TATGGTGGATTATGAAAAGA+AGG 0.509898 2_3:+60699665 Msa0303520:CDS
TACCCTCTTCGGGAACTCAT+TGG 0.513298 2_3:-60699040 None:intergenic
AAGAAGAGGGTCGCGTACGA+TGG 0.513958 2_3:-60698514 None:intergenic
ACTTCGCTAACACAGCTAAA+GGG 0.514081 2_3:-60700811 None:intergenic
TCCTCTAACAATGCTGGATG+AGG 0.514770 2_3:-60699121 None:intergenic
TATAGGGTATGTATGCCGTT+CGG 0.515712 2_3:+60704882 Msa0303520:three_prime_UTR
CTCGCAGCATTATGGTGTGT+GGG 0.516947 2_3:-60704238 None:intergenic
TGCTGTCGTGGCATTGGTGG+TGG 0.516987 2_3:-60699091 None:intergenic
TATCCATCTGCATATGGAGG+TGG 0.517988 2_3:-60700565 None:intergenic
AAAACTAATTGTATGTTGGT+GGG 0.519407 2_3:+60705213 Msa0303520:three_prime_UTR
CAAGCTGAAAGCATATAGTA+AGG 0.520368 2_3:-60704604 None:intergenic
GCTGAGCTTGCTAGCATGGA+TGG 0.521001 2_3:+60699768 Msa0303520:CDS
TCGTGCTGAGCTTGCTAGCA+TGG 0.521988 2_3:+60699764 Msa0303520:CDS
CTGAACATGAGATGCATTCG+AGG 0.524074 2_3:+60699290 Msa0303520:CDS
CATCGTATGAATTTAGCGAT+TGG 0.524610 2_3:+60699256 Msa0303520:CDS
GTGTTATCTTGATCCATCAC+AGG 0.526559 2_3:-60704362 None:intergenic
GCAGTACCCACCCCATAAAG+AGG 0.528840 2_3:-60700704 None:intergenic
AGACCTTGCAGCTGCGAAGG+AGG 0.529458 2_3:+60699228 Msa0303520:CDS
CATGGAACAGAGGCAGTCAA+TGG 0.533149 2_3:+60699701 Msa0303520:CDS
GAAAGCTTTAAAAGGTATGG+TGG 0.533811 2_3:+60704437 Msa0303520:three_prime_UTR
TATGGTTGCAGATGGAGAGC+TGG 0.534739 2_3:+60704180 Msa0303520:intron
TGTATAACTTCATTCTTCAA+CGG 0.535567 2_3:-60699364 None:intergenic
AAACTAATTGTATGTTGGTG+GGG 0.541491 2_3:+60705214 Msa0303520:three_prime_UTR
CTACAAAACTAATTGTATGT+TGG 0.543536 2_3:+60705209 Msa0303520:three_prime_UTR
GTGAAATGTATTATGGGCTG+AGG 0.545481 2_3:+60704311 Msa0303520:three_prime_UTR
CGTGCGGGAAACTCATAGGT+TGG 0.548592 2_3:+60704930 Msa0303520:three_prime_UTR
GGAATATGCTGTCGTGGCAT+TGG 0.548596 2_3:-60699097 None:intergenic
TCTAACAATGCTGGATGAGG+TGG 0.550555 2_3:-60699118 None:intergenic
CCTCTTCGGGAACTCATTGG+TGG 0.551456 2_3:-60699037 None:intergenic
TTATGGGCTGAGGGCAAGTA+GGG 0.551600 2_3:+60704321 Msa0303520:three_prime_UTR
TGATGAAAGAGTTTATCAGC+AGG 0.553082 2_3:+60704629 Msa0303520:three_prime_UTR
TAGGAAATGTACCTACTGAT+GGG 0.553548 2_3:+60705005 Msa0303520:three_prime_UTR
AACACAGCTAAAGGGATGGC+AGG 0.555700 2_3:-60700803 None:intergenic
TATCAAAACACAACAAAGGC+AGG 0.556096 2_3:-60704392 None:intergenic
CTAGCATGGATGGAAGACAT+TGG 0.560779 2_3:+60699778 Msa0303520:CDS
AGCCCATAATACATTTCACC+CGG 0.563030 2_3:-60704307 None:intergenic
TCGGAAGGTCCTTATGCTCG+CGG 0.566608 2_3:+60699067 Msa0303520:CDS
ACCAAGAACTGATGCGTGCT+AGG 0.567292 2_3:+60699527 Msa0303520:CDS
TCAACTAATGAAGAACATCT+CGG 0.568018 2_3:-60704274 None:intergenic
CTGAGGGCAAGTAGGGCACA+GGG 0.571813 2_3:+60704328 Msa0303520:three_prime_UTR
GGAGGTAACGACTTCAACCT+AGG 0.571856 2_3:-60705178 None:intergenic
TTATGAAAAGAAGGCAAACA+TGG 0.573229 2_3:+60699674 Msa0303520:CDS
GCTCCTCCTTCGCAGCTGCA+AGG 0.574836 2_3:-60699231 None:intergenic
ATTATGGGCTGAGGGCAAGT+AGG 0.575314 2_3:+60704320 Msa0303520:three_prime_UTR
GTAGGAAATGTACCTACTGA+TGG 0.577220 2_3:+60705004 Msa0303520:three_prime_UTR
ATTCAACGACGGTTTGAGCG+AGG 0.579107 2_3:-60700749 None:intergenic
AAAGGTCCTCTTTATGGGGT+GGG 0.581180 2_3:+60700698 Msa0303520:CDS
TGAATCTAAGTGATTGATGT+TGG 0.581375 2_3:+60700767 Msa0303520:exon
TCTCGCAGCATTATGGTGTG+TGG 0.585323 2_3:-60704239 None:intergenic
CGCTAACACAGCTAAAGGGA+TGG 0.585429 2_3:-60700807 None:intergenic
GAAAGGTCCTCTTTATGGGG+TGG 0.586390 2_3:+60700697 Msa0303520:CDS
ATATGCTGTCGTGGCATTGG+TGG 0.591214 2_3:-60699094 None:intergenic
ACAGGAGGTTGATTGATGAT+CGG 0.594043 2_3:+60699191 Msa0303520:CDS
TTCCCACCTCCATATGCAGA+TGG 0.594536 2_3:+60700562 Msa0303520:CDS
ATCCATCTGCATATGGAGGT+GGG 0.596363 2_3:-60700564 None:intergenic
CGGAAGGTCCTTATGCTCGC+GGG 0.597736 2_3:+60699068 Msa0303520:CDS
TCCGAACTTCATAGAGCGTG+CGG 0.599188 2_3:+60704914 Msa0303520:three_prime_UTR
CAAACAAGAACTTTCTGGGA+AGG 0.599275 2_3:+60699420 Msa0303520:CDS
TAGCTGTGTTAGCGAAGTAG+CGG 0.599283 2_3:+60700816 Msa0303520:three_prime_UTR
TTGATGTTGGTGATGAAGAA+AGG 0.600863 2_3:+60700780 Msa0303520:three_prime_UTR
TGAAATGAGGAGGCTGGTGG+CGG 0.604523 2_3:+60699165 Msa0303520:CDS
GCATGCTGAAATGAGGAGGC+TGG 0.605896 2_3:+60699159 Msa0303520:CDS
GGCTGGTGGCGGATAACAGG+AGG 0.608308 2_3:+60699176 Msa0303520:CDS
GAGCGTGCAAGAAACTCATA+GGG 0.610837 2_3:-60704811 None:intergenic
CCAAAGCACAATTAAACCAT+CGG 0.612942 2_3:-60704671 None:intergenic
TTAGTTGAAAATGCAAAACC+GGG 0.613401 2_3:+60704289 Msa0303520:three_prime_UTR
CACCAATGAGTTCCCGAAGA+GGG 0.614590 2_3:+60699038 Msa0303520:CDS
CGTGCAAGAAACTCATAGGG+TGG 0.615760 2_3:-60704808 None:intergenic
CGAGCATAAGGACCTTCCGA+TGG 0.617038 2_3:-60699064 None:intergenic
GGGGCCATTTAGACGCGAGT+AGG 0.619983 2_3:+60705026 Msa0303520:three_prime_UTR
CATAATTTATTACTAAGTGT+AGG 0.621202 2_3:+60704986 Msa0303520:three_prime_UTR
CGAAGAGGGTATCCATCGGA+AGG 0.623087 2_3:+60699052 Msa0303520:CDS
CCGAACTTCATAGAGCGTGC+GGG 0.626111 2_3:+60704915 Msa0303520:three_prime_UTR
AAGTGCAGCATGCTGAAATG+AGG 0.630681 2_3:+60699152 Msa0303520:CDS
GTGCAAGAAACTCATAGGGT+GGG 0.634316 2_3:-60704807 None:intergenic
AGGAAATGTACCTACTGATG+GGG 0.638320 2_3:+60705006 Msa0303520:three_prime_UTR
TGAAATGTATTATGGGCTGA+GGG 0.638805 2_3:+60704312 Msa0303520:three_prime_UTR
TTCCCGAAGAGGGTATCCAT+CGG 0.640372 2_3:+60699048 Msa0303520:CDS
AAAATATCAAAACACAACAA+AGG 0.643607 2_3:-60704396 None:intergenic
TGTTATCTTGATCCATCACA+GGG 0.644177 2_3:-60704361 None:intergenic
TCGCAGCATTATGGTGTGTG+GGG 0.649104 2_3:-60704237 None:intergenic
GGATTTGGATAGTATGCATG+AGG 0.650640 2_3:+60705154 Msa0303520:three_prime_UTR
AGCATGGATGGAAGACATTG+GGG 0.653311 2_3:+60699780 Msa0303520:CDS
TGAGGTGGAATATGCTGTCG+TGG 0.657020 2_3:-60699103 None:intergenic
CCATATCCATCTGCATATGG+AGG 0.657742 2_3:-60700568 None:intergenic
GGAAATGTACCTACTGATGG+GGG 0.669640 2_3:+60705007 Msa0303520:three_prime_UTR
GATGAAAGAGTTTATCAGCA+GGG 0.669777 2_3:+60704630 Msa0303520:three_prime_UTR
GCATACTATCCAAATCCTAG+TGG 0.669807 2_3:-60705148 None:intergenic
TGCTGAAATGAGGAGGCTGG+TGG 0.673111 2_3:+60699162 Msa0303520:CDS
TGAACATGAGATGCATTCGA+GGG 0.676175 2_3:+60699291 Msa0303520:CDS
AGAGAAAGGTCCTCTTTATG+GGG 0.677550 2_3:+60700694 Msa0303520:CDS
TGCAGCATGCTGAAATGAGG+AGG 0.680683 2_3:+60699155 Msa0303520:CDS
CAATCACTTAGATTCAACGA+CGG 0.682596 2_3:-60700760 None:intergenic
TTGGTGGCTCTCTATGAACA+CGG 0.684269 2_3:-60699021 None:intergenic
ACATGGAGTTCATGGAACAG+AGG 0.685058 2_3:+60699691 Msa0303520:CDS
CCACCAATGAGTTCCCGAAG+AGG 0.693852 2_3:+60699037 Msa0303520:CDS
AGATGGATATGGTGTTCACA+TGG 0.705947 2_3:+60700579 Msa0303520:CDS
TTCGGATTATAGGATCCGAA+CGG 0.708886 2_3:-60704897 None:intergenic
AAGCATATAGTAAGGCACCA+AGG 0.723002 2_3:-60704596 None:intergenic
GAAAGAGTTTATCAGCAGGG+CGG 0.743630 2_3:+60704633 Msa0303520:three_prime_UTR
CATATAGTAAGGCACCAAGG+AGG 0.769093 2_3:-60704593 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATACTGTTAATTTTAAAT+TGG + chr2_3:60700898-60700917 Msa0303520:intron 10.0%
!! TTAAAAGCTTAAAAAAAATT+TGG + chr2_3:60702158-60702177 Msa0303520:intron 10.0%
!!! ATTTTTGTTTTATAGAACTA+TGG + chr2_3:60699647-60699666 Msa0303520:intron 15.0%
!! TTAATAAAAGACATGAAAAA+CGG + chr2_3:60699964-60699983 Msa0303520:intron 15.0%
!! AAAACAAGAAATATTATCAA+TGG - chr2_3:60701033-60701052 None:intergenic 15.0%
!!! TGTTTAGTTATTATTTGTTT+TGG + chr2_3:60701074-60701093 Msa0303520:intron 15.0%
!!! GTTTAGTTATTATTTGTTTT+GGG + chr2_3:60701075-60701094 Msa0303520:intron 15.0%
!!! TTTAGTTATTATTTGTTTTG+GGG + chr2_3:60701076-60701095 Msa0303520:intron 15.0%
!!! AAACTTTAAAGCTTAATTTA+TGG + chr2_3:60701404-60701423 Msa0303520:intron 15.0%
!! ATTAAAAGCTTAAAATTGTT+TGG + chr2_3:60702102-60702121 Msa0303520:intron 15.0%
!! TGTATAACAATAGTATTTAA+GGG + chr2_3:60702341-60702360 Msa0303520:intron 15.0%
!! ATAAAAAATGAGAAACTTTA+TGG - chr2_3:60702470-60702489 None:intergenic 15.0%
!! AATCTATTATATTTATGGAT+GGG + chr2_3:60702719-60702738 Msa0303520:intron 15.0%
!!! AATTAGTTTCGTATTAATAT+GGG - chr2_3:60703012-60703031 None:intergenic 15.0%
!!! TAATTAGTTTCGTATTAATA+TGG - chr2_3:60703013-60703032 None:intergenic 15.0%
!! TATAATAATAACAACAGATA+TGG - chr2_3:60703339-60703358 None:intergenic 15.0%
!!! ATATCTGTTGTTATTATTAT+AGG + chr2_3:60703338-60703357 Msa0303520:intron 15.0%
!! ATAATAATAGATACAAAGTT+AGG - chr2_3:60704163-60704182 None:intergenic 15.0%
!! TAACTTTGTATCTATTATTA+TGG + chr2_3:60704162-60704181 Msa0303520:intron 15.0%
!! AAAGAAAAAAAAAAAAAGGA+GGG - chr2_3:60704735-60704754 None:intergenic 15.0%
!! AAAAGAAAAAAAAAAAAAGG+AGG - chr2_3:60704736-60704755 None:intergenic 15.0%
!! TACACTTAGTAATAAATTAT+GGG - chr2_3:60704987-60705006 None:intergenic 15.0%
!! ATTCTCTTCAATTTCTAATT+AGG + chr2_3:60698572-60698591 Msa0303520:five_prime_UTR 20.0%
!!! TTTCACGTGTTTATATTTTT+TGG + chr2_3:60698642-60698661 Msa0303520:intron 20.0%
!!! TTCACGTGTTTATATTTTTT+GGG + chr2_3:60698643-60698662 Msa0303520:intron 20.0%
!! TTTGTACTAATGGAAATAAA+AGG - chr2_3:60698795-60698814 None:intergenic 20.0%
!!! TGTTGATAAAAATATGAAGT+TGG + chr2_3:60699318-60699337 Msa0303520:CDS 20.0%
!! AATGAAATGACATGAATAAT+AGG + chr2_3:60699933-60699952 Msa0303520:intron 20.0%
!!! TTTTGTGTATTATGTGATTA+CGG - chr2_3:60700063-60700082 None:intergenic 20.0%
!!! TTTTTAGAATTTAAGGCAAT+TGG + chr2_3:60700091-60700110 Msa0303520:intron 20.0%
!! ATCCTATTATTTGTGTTAAT+TGG + chr2_3:60700356-60700375 Msa0303520:intron 20.0%
!! ATCCAATTAACACAAATAAT+AGG - chr2_3:60700361-60700380 None:intergenic 20.0%
!! GTATATTAAGAATTGCAAAT+AGG - chr2_3:60700884-60700903 None:intergenic 20.0%
!!! AATTTTAAATTGGCATATGT+AGG + chr2_3:60700908-60700927 Msa0303520:intron 20.0%
!!! AAGTTTAAAACTTATTGTGT+TGG + chr2_3:60700985-60701004 Msa0303520:intron 20.0%
!!! TTTTAGAGTATGTTTCTTTT+AGG + chr2_3:60701442-60701461 Msa0303520:intron 20.0%
!! TTATGTTACAAATGGTTATT+TGG + chr2_3:60701630-60701649 Msa0303520:intron 20.0%
!! TATGTTACAAATGGTTATTT+GGG + chr2_3:60701631-60701650 Msa0303520:intron 20.0%
!!! TGCAAAAGATATTTAAGATT+GGG + chr2_3:60701789-60701808 Msa0303520:intron 20.0%
!! AAAAAAATTTGGTTAGACTT+CGG + chr2_3:60702169-60702188 Msa0303520:intron 20.0%
!! TGCAAACTATTTATTTGAAA+TGG + chr2_3:60702261-60702280 Msa0303520:intron 20.0%
!! TCTAATCTTATCTTTAGATT+GGG - chr2_3:60702298-60702317 None:intergenic 20.0%
!! ATCTAATCTTATCTTTAGAT+TGG - chr2_3:60702299-60702318 None:intergenic 20.0%
!! AATACTATTGTTATACAGAT+CGG - chr2_3:60702338-60702357 None:intergenic 20.0%
!! CTGTATAACAATAGTATTTA+AGG + chr2_3:60702340-60702359 Msa0303520:intron 20.0%
!! GTATAACAATAGTATTTAAG+GGG + chr2_3:60702342-60702361 Msa0303520:intron 20.0%
!! TATAACAATAGTATTTAAGG+GGG + chr2_3:60702343-60702362 Msa0303520:intron 20.0%
!!! AAGTTTCTCATTTTTTATAG+TGG + chr2_3:60702472-60702491 Msa0303520:intron 20.0%
!! ACGACAATCTATTATATTTA+TGG + chr2_3:60702714-60702733 Msa0303520:intron 20.0%
!! CAATCTATTATATTTATGGA+TGG + chr2_3:60702718-60702737 Msa0303520:intron 20.0%
!! ATCTATTATATTTATGGATG+GGG + chr2_3:60702720-60702739 Msa0303520:intron 20.0%
!! TAATTCTTGAGATTCATAAT+AGG - chr2_3:60703247-60703266 None:intergenic 20.0%
!! AAAATATCAAAACACAACAA+AGG - chr2_3:60704399-60704418 None:intergenic 20.0%
!!! ATGAACATAAAAAGCTTTTA+AGG + chr2_3:60704472-60704491 Msa0303520:three_prime_UTR 20.0%
!! AAGAAAAAAAAAAAAAGGAG+GGG - chr2_3:60704734-60704753 None:intergenic 20.0%
!! GGGAAAAGAAAAAAAAAAAA+AGG - chr2_3:60704739-60704758 None:intergenic 20.0%
!! AGGTTGGAAAAAAAAAAAAA+AGG + chr2_3:60704946-60704965 Msa0303520:three_prime_UTR 20.0%
!! TTGGAAAAAAAAAAAAAAGG+CGG + chr2_3:60704949-60704968 Msa0303520:three_prime_UTR 20.0%
!! CTACACTTAGTAATAAATTA+TGG - chr2_3:60704988-60705007 None:intergenic 20.0%
!! CATAATTTATTACTAAGTGT+AGG + chr2_3:60704986-60705005 Msa0303520:three_prime_UTR 20.0%
!! AAACTATATGCATGATTAAA+TGG - chr2_3:60705067-60705086 None:intergenic 20.0%
!! TAAAAGCTCTTTGAGTTATA+CGG - chr2_3:60698454-60698473 None:intergenic 25.0%
!! TTTTGTAAGCTAACAATACA+TGG - chr2_3:60698678-60698697 None:intergenic 25.0%
! ATCAAAAACATCAAATCCAT+GGG - chr2_3:60698702-60698721 None:intergenic 25.0%
! AATCAAAAACATCAAATCCA+TGG - chr2_3:60698703-60698722 None:intergenic 25.0%
!!! ATTAGAAGTGTTTGTACTAA+TGG - chr2_3:60698805-60698824 None:intergenic 25.0%
! ATTAGTACAAACACTTCTAA+TGG + chr2_3:60698804-60698823 Msa0303520:intron 25.0%
! CCATTTCAATTTACCTAAAA+GGG - chr2_3:60698991-60699010 None:intergenic 25.0%
!!! CCTTTTAGGTAAATTGAAAT+GGG + chr2_3:60698989-60699008 Msa0303520:intron 25.0%
! TGTATAACTTCATTCTTCAA+CGG - chr2_3:60699367-60699386 None:intergenic 25.0%
!!! TTTGTTTTATAGAACTATGG+TGG + chr2_3:60699650-60699669 Msa0303520:intron 25.0%
! ATCTTTCAGACAATTATGAA+GGG - chr2_3:60700022-60700041 None:intergenic 25.0%
! AATCACATAATACACAAAAG+TGG + chr2_3:60700064-60700083 Msa0303520:intron 25.0%
!!! TGGCAGTTTTTTAGAATTTA+AGG + chr2_3:60700084-60700103 Msa0303520:intron 25.0%
!!! AGAATTTTAGTATTCATCGA+GGG + chr2_3:60700210-60700229 Msa0303520:intron 25.0%
! ATGAAGCAAACGTTAAAAAA+GGG - chr2_3:60700493-60700512 None:intergenic 25.0%
! AATGAAGCAAACGTTAAAAA+AGG - chr2_3:60700494-60700513 None:intergenic 25.0%
!! GGTCTAAAATTATTGTGTTA+AGG - chr2_3:60700615-60700634 None:intergenic 25.0%
! GAGATAAAAGACCATTAAAA+TGG - chr2_3:60700862-60700881 None:intergenic 25.0%
!!! ATTTGTTTTGGGGTAAAATA+TGG + chr2_3:60701086-60701105 Msa0303520:intron 25.0%
!! CAACACAGATTTTTCATTAT+TGG + chr2_3:60701227-60701246 Msa0303520:intron 25.0%
! ATGTTACAAATGGTTATTTG+GGG + chr2_3:60701632-60701651 Msa0303520:intron 25.0%
!! CAATCTTAAATATCTTTTGC+AGG - chr2_3:60701790-60701809 None:intergenic 25.0%
!! CTGCAAAAGATATTTAAGAT+TGG + chr2_3:60701788-60701807 Msa0303520:intron 25.0%
! AAAAACTTTGCACAGAAATA+CGG - chr2_3:60701836-60701855 None:intergenic 25.0%
!! GCATTCTATTATGTTGATTA+GGG + chr2_3:60702004-60702023 Msa0303520:intron 25.0%
! TGATGAAATATCATTGATCA+AGG + chr2_3:60702501-60702520 Msa0303520:intron 25.0%
! AAAGATGACTAATTCTAACT+GGG - chr2_3:60703057-60703076 None:intergenic 25.0%
! TAAAGATGACTAATTCTAAC+TGG - chr2_3:60703058-60703077 None:intergenic 25.0%
! GATTCACTTATTGAAGAATT+TGG + chr2_3:60703549-60703568 Msa0303520:intron 25.0%
! GATTCACTTATTGAAGAATT+TGG + chr2_3:60703549-60703568 Msa0303520:intron 25.0%
!! TAAATCTTGTGAATCTTTTG+AGG + chr2_3:60703898-60703917 Msa0303520:intron 25.0%
! CAAAGTTAGGTAGAAATAAA+TGG - chr2_3:60704150-60704169 None:intergenic 25.0%
! ATTAGTTGAAAATGCAAAAC+CGG + chr2_3:60704288-60704307 Msa0303520:three_prime_UTR 25.0%
!!! TTGGAAATGAAAGCTTTAAA+AGG + chr2_3:60704429-60704448 Msa0303520:three_prime_UTR 25.0%
!!! AATGAAAGCTTTAAAAGGTA+TGG + chr2_3:60704434-60704453 Msa0303520:three_prime_UTR 25.0%
!!! AACATAAAAAGCTTTTAAGG+AGG + chr2_3:60704475-60704494 Msa0303520:three_prime_UTR 25.0%
!!! ACATAAAAAGCTTTTAAGGA+GGG + chr2_3:60704476-60704495 Msa0303520:three_prime_UTR 25.0%
!!! ATAGTCATGTTTTGTTCAAT+TGG + chr2_3:60704565-60704584 Msa0303520:three_prime_UTR 25.0%
!!! TAGTCATGTTTTGTTCAATT+GGG + chr2_3:60704566-60704585 Msa0303520:three_prime_UTR 25.0%
!! CAATCTAAAATTTGGAAATC+AGG - chr2_3:60704707-60704726 None:intergenic 25.0%
! AGAAAAAAAAAAAAAGGAGG+GGG - chr2_3:60704733-60704752 None:intergenic 25.0%
!!! TTTTTTCTTTTCCCTTTAGT+TGG + chr2_3:60704745-60704764 Msa0303520:three_prime_UTR 25.0%
!! TTTTTCTTTTCCCTTTAGTT+GGG + chr2_3:60704746-60704765 Msa0303520:three_prime_UTR 25.0%
!!! ATTAGTTTTGTAGTGTACAA+TGG - chr2_3:60705202-60705221 None:intergenic 25.0%
! CTACAAAACTAATTGTATGT+TGG + chr2_3:60705209-60705228 Msa0303520:three_prime_UTR 25.0%
! AAAACTAATTGTATGTTGGT+GGG + chr2_3:60705213-60705232 Msa0303520:three_prime_UTR 25.0%
!! GAGAATTTTGATGAAGAAGA+GGG - chr2_3:60698530-60698549 None:intergenic 30.0%
!! TGAGAATTTTGATGAAGAAG+AGG - chr2_3:60698531-60698550 None:intergenic 30.0%
!! CCCTTTTAGGTAAATTGAAA+TGG + chr2_3:60698988-60699007 Msa0303520:intron 30.0%
CCCATTTCAATTTACCTAAA+AGG - chr2_3:60698992-60699011 None:intergenic 30.0%
AGTATCAAACAAGAACTTTC+TGG + chr2_3:60699415-60699434 Msa0303520:CDS 30.0%
GTATCAAACAAGAACTTTCT+GGG + chr2_3:60699416-60699435 Msa0303520:CDS 30.0%
! TCTATCTTTAAGCATCCTTT+TGG + chr2_3:60699583-60699602 Msa0303520:intron 30.0%
!! TATGGTGGATTATGAAAAGA+AGG + chr2_3:60699665-60699684 Msa0303520:CDS 30.0%
TTATGAAAAGAAGGCAAACA+TGG + chr2_3:60699674-60699693 Msa0303520:CDS 30.0%
AAGGATGATAAATTCTGCAA+AGG - chr2_3:60699834-60699853 None:intergenic 30.0%
GCTATGCTAGTAAATACATA+TGG - chr2_3:60699869-60699888 None:intergenic 30.0%
CATCTTTCAGACAATTATGA+AGG - chr2_3:60700023-60700042 None:intergenic 30.0%
CTTCATAATTGTCTGAAAGA+TGG + chr2_3:60700021-60700040 Msa0303520:intron 30.0%
ATAATTGTCTGAAAGATGGT+TGG + chr2_3:60700025-60700044 Msa0303520:intron 30.0%
TAATTGTCTGAAAGATGGTT+GGG + chr2_3:60700026-60700045 Msa0303520:intron 30.0%
GAGTTAAGGTGATTAAGAAT+AGG - chr2_3:60700146-60700165 None:intergenic 30.0%
!! CTATGTGATGATTTTGAGAA+CGG + chr2_3:60700186-60700205 Msa0303520:intron 30.0%
!! CAGAATTTTAGTATTCATCG+AGG + chr2_3:60700209-60700228 Msa0303520:intron 30.0%
! ATATCTTTCGATCTTTTGAC+TGG + chr2_3:60700263-60700282 Msa0303520:intron 30.0%
TATAGACACATCATGATGTT+TGG + chr2_3:60700391-60700410 Msa0303520:intron 30.0%
TGAAGCAAACGTTAAAAAAG+GGG - chr2_3:60700492-60700511 None:intergenic 30.0%
! TTGCCTTATGGAACAAATTT+TGG + chr2_3:60700523-60700542 Msa0303520:CDS 30.0%
! CTACCAAAATTTGTTCCATA+AGG - chr2_3:60700529-60700548 None:intergenic 30.0%
AAGCAAAGTAAATGAAACCT+TGG - chr2_3:60700652-60700671 None:intergenic 30.0%
TGAATCTAAGTGATTGATGT+TGG + chr2_3:60700767-60700786 Msa0303520:exon 30.0%
TCCTTGACATAAAACACATT+GGG - chr2_3:60701290-60701309 None:intergenic 30.0%
ATCCTTGACATAAAACACAT+TGG - chr2_3:60701291-60701310 None:intergenic 30.0%
! TAGTGGATATTTGTAACTGT+CGG + chr2_3:60701355-60701374 Msa0303520:intron 30.0%
TAAAGTTTAAATTCCTGCAC+CGG - chr2_3:60701392-60701411 None:intergenic 30.0%
! GTCTGATTTTCTGTTTCAAT+TGG + chr2_3:60701535-60701554 Msa0303520:intron 30.0%
TGAGTGACTTATGTTACAAA+TGG + chr2_3:60701622-60701641 Msa0303520:intron 30.0%
AATGCCAATGTTCATTTCAT+GGG + chr2_3:60701670-60701689 Msa0303520:intron 30.0%
!!! TCAATGATGAGTGGATTTTT+TGG + chr2_3:60701710-60701729 Msa0303520:intron 30.0%
!! GTATTTCTGTGCAAAGTTTT+TGG + chr2_3:60701835-60701854 Msa0303520:intron 30.0%
TGTATTACCTTTGATTGAAG+TGG + chr2_3:60701917-60701936 Msa0303520:intron 30.0%
ATTGTAAGTTGTATCAATGC+AGG + chr2_3:60701952-60701971 Msa0303520:intron 30.0%
TTGTAAGTTGTATCAATGCA+GGG + chr2_3:60701953-60701972 Msa0303520:intron 30.0%
! ATTTTCCAGTTCAGTTAAGT+TGG + chr2_3:60701982-60702001 Msa0303520:intron 30.0%
! GGCATTCTATTATGTTGATT+AGG + chr2_3:60702003-60702022 Msa0303520:intron 30.0%
AAAATTGTTTGGTTAGACTC+CGG + chr2_3:60702113-60702132 Msa0303520:intron 30.0%
CAAATACTATTTACAGCATC+CGG - chr2_3:60702135-60702154 None:intergenic 30.0%
!! CTCTCTTTGAAGCTTAAAAA+GGG - chr2_3:60702390-60702409 None:intergenic 30.0%
!! TCTCTCTTTGAAGCTTAAAA+AGG - chr2_3:60702391-60702410 None:intergenic 30.0%
GAGAAACTTTATGGACTTTA+TGG - chr2_3:60702461-60702480 None:intergenic 30.0%
!!! CTCATTTTTTATAGTGGTTG+AGG + chr2_3:60702478-60702497 Msa0303520:intron 30.0%
AAAACTTCGCAGAGAAAATA+TGG - chr2_3:60702548-60702567 None:intergenic 30.0%
! TATTTTCTCTGCGAAGTTTT+TGG + chr2_3:60702548-60702567 Msa0303520:intron 30.0%
TCTAAGTTGTAGCAATGTTT+AGG + chr2_3:60702664-60702683 Msa0303520:intron 30.0%
CTAAGTTGTAGCAATGTTTA+GGG + chr2_3:60702665-60702684 Msa0303520:intron 30.0%
GATTGTCGTATTATTGCAAT+TGG - chr2_3:60702703-60702722 None:intergenic 30.0%
! TCTAACCTGGTATCTTATTT+CGG - chr2_3:60703081-60703100 None:intergenic 30.0%
AAAGATGACTAATTCTAACC+TGG - chr2_3:60703094-60703113 None:intergenic 30.0%
! TCTAACCTGGTATCTTATTT+CGG - chr2_3:60703081-60703100 None:intergenic 30.0%
AAAGATGACTAATTCTAACC+TGG - chr2_3:60703094-60703113 None:intergenic 30.0%
GATTTAGTTACTAGTGAAAC+AGG + chr2_3:60703152-60703171 Msa0303520:intron 30.0%
! AAACAGGATTTTCAGCATAA+TGG + chr2_3:60703168-60703187 Msa0303520:intron 30.0%
TCTCAAGAATTAAGATCTTC+TGG + chr2_3:60703255-60703274 Msa0303520:intron 30.0%
! AGACTTAATTTTCCTTTCCT+CGG - chr2_3:60703389-60703408 None:intergenic 30.0%
!! ATATGGGATGATTTGATTTG+CGG - chr2_3:60703437-60703456 None:intergenic 30.0%
AATCATCCCATATTGCTAAT+TGG + chr2_3:60703444-60703463 Msa0303520:intron 30.0%
! TATTGAAGAATTTGGAGTTG+TGG + chr2_3:60703593-60703612 Msa0303520:intron 30.0%
!! GATTTTAATGCCCTTCAAAA+AGG - chr2_3:60703625-60703644 None:intergenic 30.0%
!!! TTTTGAAGGGCATTAAAATC+TGG + chr2_3:60703625-60703644 Msa0303520:intron 30.0%
!! TTTGAAGGGCATTAAAATCT+GGG + chr2_3:60703626-60703645 Msa0303520:intron 30.0%
ATGTTAAGAATTCGAATCAG+TGG + chr2_3:60703713-60703732 Msa0303520:intron 30.0%
!!! GAATCTTTTGAGGTTATTAG+TGG + chr2_3:60703908-60703927 Msa0303520:intron 30.0%
AGATGAACACTAGATAAGTA+GGG - chr2_3:60703968-60703987 None:intergenic 30.0%
AAGATGAACACTAGATAAGT+AGG - chr2_3:60703969-60703988 None:intergenic 30.0%
TCTATTATTATGGTTGCAGA+TGG + chr2_3:60704172-60704191 Msa0303520:intron 30.0%
!! TTACTTTTCAGTCCCAAAAA+TGG - chr2_3:60704209-60704228 None:intergenic 30.0%
!!! ATTTTTGGGACTGAAAAGTA+AGG + chr2_3:60704208-60704227 Msa0303520:three_prime_UTR 30.0%
TCAACTAATGAAGAACATCT+CGG - chr2_3:60704277-60704296 None:intergenic 30.0%
TTAGTTGAAAATGCAAAACC+GGG + chr2_3:60704289-60704308 Msa0303520:three_prime_UTR 30.0%
!! GTTTAGTATTTTTATGCCGA+TGG + chr2_3:60704655-60704674 Msa0303520:three_prime_UTR 30.0%
CAAAACACGTTGAAACATTT+CGG - chr2_3:60704854-60704873 None:intergenic 30.0%
GAAGTAAAAATTAAGCCACT+AGG + chr2_3:60705133-60705152 Msa0303520:three_prime_UTR 30.0%
AAAATTAAGCCACTAGGATT+TGG + chr2_3:60705139-60705158 Msa0303520:three_prime_UTR 30.0%
CAAAACTAATTGTATGTTGG+TGG + chr2_3:60705212-60705231 Msa0303520:three_prime_UTR 30.0%
AAACTAATTGTATGTTGGTG+GGG + chr2_3:60705214-60705233 Msa0303520:three_prime_UTR 30.0%
! TGTTAGCTTACAAAAACCCA+TGG + chr2_3:60698683-60698702 Msa0303520:intron 35.0%
CATCGTATGAATTTAGCGAT+TGG + chr2_3:60699256-60699275 Msa0303520:CDS 35.0%
AAACATCTTTCGTAAGTGTC+TGG - chr2_3:60699447-60699466 None:intergenic 35.0%
CACTTACGAAAGATGTTTCT+AGG + chr2_3:60699449-60699468 Msa0303520:CDS 35.0%
TCAATCTCAGATCTCATTGA+AGG - chr2_3:60699499-60699518 None:intergenic 35.0%
! TCAATGAGATCTGAGATTGA+TGG + chr2_3:60699499-60699518 Msa0303520:CDS 35.0%
! TTGTGGATTGATTGCTAACA+CGG + chr2_3:60699551-60699570 Msa0303520:intron 35.0%
! TCTTTAAGCATCCTTTTGGT+TGG + chr2_3:60699587-60699606 Msa0303520:intron 35.0%
!! CTTTAAGCATCCTTTTGGTT+GGG + chr2_3:60699588-60699607 Msa0303520:intron 35.0%
AATTGTCTGAAAGATGGTTG+GGG + chr2_3:60700027-60700046 Msa0303520:intron 35.0%
GGAGTTCATTAGTGATAACA+GGG + chr2_3:60700231-60700250 Msa0303520:intron 35.0%
! TGCTACAGTATCTGCATTTT+TGG - chr2_3:60700337-60700356 None:intergenic 35.0%
!! AACAAATTTTGGTAGTCCAG+AGG + chr2_3:60700534-60700553 Msa0303520:CDS 35.0%
!! ACAAATTTTGGTAGTCCAGA+GGG + chr2_3:60700535-60700554 Msa0303520:CDS 35.0%
! ACCTCGTATTCAATTTTCCA+AGG + chr2_3:60700632-60700651 Msa0303520:intron 35.0%
ACCTTGGAAAATTGAATACG+AGG - chr2_3:60700636-60700655 None:intergenic 35.0%
CAATCACTTAGATTCAACGA+CGG - chr2_3:60700763-60700782 None:intergenic 35.0%
!! TTGATGTTGGTGATGAAGAA+AGG + chr2_3:60700780-60700799 Msa0303520:three_prime_UTR 35.0%
!!! GTGTATGCATGCCATTTTAA+TGG + chr2_3:60700848-60700867 Msa0303520:three_prime_UTR 35.0%
!!! TGTGCTTTACTGTTTTTACC+TGG + chr2_3:60700938-60700957 Msa0303520:intron 35.0%
GGGTAAAATATGGTTTCTGT+TGG + chr2_3:60701096-60701115 Msa0303520:intron 35.0%
AATATGGTTTCTGTTGGTCA+CGG + chr2_3:60701102-60701121 Msa0303520:intron 35.0%
TTGTTTAACCAGAGCACAAA+CGG - chr2_3:60701258-60701277 None:intergenic 35.0%
!! AAGGATTGAGAGTGTGATTT+TGG + chr2_3:60701305-60701324 Msa0303520:intron 35.0%
ATCTCATATCTCTCATGTAG+TGG + chr2_3:60701338-60701357 Msa0303520:intron 35.0%
TTTGCAACTATGTGTACGAT+TGG + chr2_3:60701484-60701503 Msa0303520:intron 35.0%
CTGTTTCAATTGGCAATATG+TGG + chr2_3:60701545-60701564 Msa0303520:intron 35.0%
! AAATGGTTATTTGGGGTGTA+TGG + chr2_3:60701639-60701658 Msa0303520:intron 35.0%
GAATGCCAATGTTCATTTCA+TGG + chr2_3:60701669-60701688 Msa0303520:intron 35.0%
!! TTTCTGTGCAAAGTTTTTGG+TGG + chr2_3:60701838-60701857 Msa0303520:intron 35.0%
AACTAACAACTGATGTTTGC+TGG + chr2_3:60701872-60701891 Msa0303520:intron 35.0%
TTAATAGCAAGACAACACAG+TGG - chr2_3:60702087-60702106 None:intergenic 35.0%
TAGACTTCGGATGTTGTAAT+TGG + chr2_3:60702182-60702201 Msa0303520:intron 35.0%
TGCTTTACTGAGATTGAAGT+CGG + chr2_3:60702209-60702228 Msa0303520:intron 35.0%
TCTTTAGATTGGGCAATTTC+TGG - chr2_3:60702288-60702307 None:intergenic 35.0%
CTATTGTTATACAGATCGGT+AGG - chr2_3:60702334-60702353 None:intergenic 35.0%
AACAATAGTATTTAAGGGGG+TGG + chr2_3:60702346-60702365 Msa0303520:intron 35.0%
ACAATAGTATTTAAGGGGGT+GGG + chr2_3:60702347-60702366 Msa0303520:intron 35.0%
TGGACAATCTTGAGTCATAA+AGG - chr2_3:60702528-60702547 None:intergenic 35.0%
CTTTGCTCTTCTATGTTAGA+AGG + chr2_3:60702792-60702811 Msa0303520:intron 35.0%
!! ACTGGTCTTCAAATATTCCA+CGG - chr2_3:60702831-60702850 None:intergenic 35.0%
ATAAGATTCAGATCAGCAAC+TGG - chr2_3:60702849-60702868 None:intergenic 35.0%
GTTGCTGATCTGAATCTTAT+AGG + chr2_3:60702849-60702868 Msa0303520:intron 35.0%
GGTAAATAGCAAGTTCTACA+TGG - chr2_3:60702906-60702925 None:intergenic 35.0%
TCTTATGATCGTAATCAGCA+AGG - chr2_3:60702927-60702946 None:intergenic 35.0%
TAATTGTTGCACACCTGAAT+AGG + chr2_3:60702965-60702984 Msa0303520:intron 35.0%
TCTAACCTAGTATCCTATTC+AGG - chr2_3:60702981-60703000 None:intergenic 35.0%
GAAACTAATTATTGCACACC+TGG + chr2_3:60703022-60703041 Msa0303520:intron 35.0%
AATTATTGCACACCTGGAAT+AGG + chr2_3:60703028-60703047 Msa0303520:intron 35.0%
CTTTACCGAAATAAGATACC+AGG + chr2_3:60703073-60703092 Msa0303520:intron 35.0%
CTTTACCGAAATAAGATACC+AGG + chr2_3:60703073-60703092 Msa0303520:intron 35.0%
AAAATGATTCGACGGATACT+TGG + chr2_3:60703282-60703301 Msa0303520:intron 35.0%
TTATAGGTCTCAGTTGTTAC+TGG + chr2_3:60703354-60703373 Msa0303520:intron 35.0%
TATAGGTCTCAGTTGTTACT+GGG + chr2_3:60703355-60703374 Msa0303520:intron 35.0%
ATTTGTGTACGCAACAAAAC+TGG + chr2_3:60703411-60703430 Msa0303520:intron 35.0%
CTGGAACCAATTAGCAATAT+GGG - chr2_3:60703453-60703472 None:intergenic 35.0%
! TCTGGAACCAATTAGCAATA+TGG - chr2_3:60703454-60703473 None:intergenic 35.0%
TGCATCATATTATCCAGTGT+TGG + chr2_3:60703526-60703545 Msa0303520:intron 35.0%
GCATCATATTATCCAGTGTT+GGG + chr2_3:60703527-60703546 Msa0303520:intron 35.0%
! AAGAATTTGGAATCCAGTCT+TGG + chr2_3:60703562-60703581 Msa0303520:intron 35.0%
! AGAATTTGGAATCCAGTCTT+GGG + chr2_3:60703563-60703582 Msa0303520:intron 35.0%
! TGTGGAAACTACCTTTTTGA+AGG + chr2_3:60703611-60703630 Msa0303520:intron 35.0%
! GTGGAAACTACCTTTTTGAA+GGG + chr2_3:60703612-60703631 Msa0303520:intron 35.0%
!! TTGAAGGGCATTAAAATCTG+GGG + chr2_3:60703627-60703646 Msa0303520:intron 35.0%
!! GCTTAGAGGCTAGTTTATTT+AGG + chr2_3:60703650-60703669 Msa0303520:intron 35.0%
TCTTGGAGTAAACTTGGTTA+TGG + chr2_3:60703738-60703757 Msa0303520:intron 35.0%
CTTGGAGTAAACTTGGTTAT+GGG + chr2_3:60703739-60703758 Msa0303520:intron 35.0%
ACTTGGTTATGGGATTATAG+TGG + chr2_3:60703749-60703768 Msa0303520:intron 35.0%
TTTCCAGCTAGATTGGAAAT+TGG + chr2_3:60703836-60703855 Msa0303520:intron 35.0%
TTTCCAATTTCCAATCTAGC+TGG - chr2_3:60703842-60703861 None:intergenic 35.0%
GCTAGATTGGAAATTGGAAA+TGG + chr2_3:60703842-60703861 Msa0303520:intron 35.0%
!! AGGTTATTAGTGGACTTCAT+GGG + chr2_3:60703918-60703937 Msa0303520:intron 35.0%
AATCACTTGAATATGCAGAG+CGG - chr2_3:60704125-60704144 None:intergenic 35.0%
AAACCGGGTGAAATGTATTA+TGG + chr2_3:60704304-60704323 Msa0303520:three_prime_UTR 35.0%
AACCGGGTGAAATGTATTAT+GGG + chr2_3:60704305-60704324 Msa0303520:three_prime_UTR 35.0%
! TGAAATGTATTATGGGCTGA+GGG + chr2_3:60704312-60704331 Msa0303520:three_prime_UTR 35.0%
! GGATATATTTTACCCTGTGA+TGG + chr2_3:60704349-60704368 Msa0303520:three_prime_UTR 35.0%
TGTTATCTTGATCCATCACA+GGG - chr2_3:60704364-60704383 None:intergenic 35.0%
TATCAAAACACAACAAAGGC+AGG - chr2_3:60704395-60704414 None:intergenic 35.0%
!!! TGATATTTTAGCCGTGAGAT+TGG + chr2_3:60704410-60704429 Msa0303520:three_prime_UTR 35.0%
AGCTTTCATTTCCAATCTCA+CGG - chr2_3:60704424-60704443 None:intergenic 35.0%
!! GAAAGCTTTAAAAGGTATGG+TGG + chr2_3:60704437-60704456 Msa0303520:three_prime_UTR 35.0%
! CAAGCTGAAAGCATATAGTA+AGG - chr2_3:60704607-60704626 None:intergenic 35.0%
CTTACTATATGCTTTCAGCT+TGG + chr2_3:60704605-60704624 Msa0303520:three_prime_UTR 35.0%
TGATGAAAGAGTTTATCAGC+AGG + chr2_3:60704629-60704648 Msa0303520:three_prime_UTR 35.0%
GATGAAAGAGTTTATCAGCA+GGG + chr2_3:60704630-60704649 Msa0303520:three_prime_UTR 35.0%
CCAAAGCACAATTAAACCAT+CGG - chr2_3:60704674-60704693 None:intergenic 35.0%
GCATTTGACATTTGAGTAGA+TGG + chr2_3:60704774-60704793 Msa0303520:three_prime_UTR 35.0%
! CGAAATGTTTCAACGTGTTT+TGG + chr2_3:60704852-60704871 Msa0303520:three_prime_UTR 35.0%
!! AATGTTTCAACGTGTTTTGG+AGG + chr2_3:60704855-60704874 Msa0303520:three_prime_UTR 35.0%
!!! GTGTTTTGGAGGTTTCTATA+GGG + chr2_3:60704866-60704885 Msa0303520:three_prime_UTR 35.0%
CTCTATGAAGTTCGGATTAT+AGG - chr2_3:60704910-60704929 None:intergenic 35.0%
TAGGAAATGTACCTACTGAT+GGG + chr2_3:60705005-60705024 Msa0303520:three_prime_UTR 35.0%
!! AGTTTTGTAGTGTACAATGG+AGG - chr2_3:60705199-60705218 None:intergenic 35.0%
! GTGTTTGTGCTTACCCTTTT+AGG + chr2_3:60698975-60698994 Msa0303520:intron 40.0%
! ACAGGAGGTTGATTGATGAT+CGG + chr2_3:60699191-60699210 Msa0303520:CDS 40.0%
TGAACATGAGATGCATTCGA+GGG + chr2_3:60699291-60699310 Msa0303520:CDS 40.0%
TGAAGTTGGAGTCTGATCTT+AGG + chr2_3:60699332-60699351 Msa0303520:CDS 40.0%
! CAAACAAGAACTTTCTGGGA+AGG + chr2_3:60699420-60699439 Msa0303520:CDS 40.0%
ATGCAGAAATCCCAACCAAA+AGG - chr2_3:60699601-60699620 None:intergenic 40.0%
GCAGTCAATGGAGAAAAACA+TGG + chr2_3:60699713-60699732 Msa0303520:CDS 40.0%
GGAGAAAAACATGGTTTCCA+TGG + chr2_3:60699722-60699741 Msa0303520:CDS 40.0%
ACGAAGTTTCTCAACTTCTC+GGG - chr2_3:60699748-60699767 None:intergenic 40.0%
CACGAAGTTTCTCAACTTCT+CGG - chr2_3:60699749-60699768 None:intergenic 40.0%
TAGCATGGATGGAAGACATT+GGG + chr2_3:60699779-60699798 Msa0303520:CDS 40.0%
CATATGGAGTTAACGACTGA+AGG - chr2_3:60699853-60699872 None:intergenic 40.0%
ATTGTCTGAAAGATGGTTGG+GGG + chr2_3:60700028-60700047 Msa0303520:intron 40.0%
! AGACAAGTTAGAGAAAGCGT+GGG - chr2_3:60700168-60700187 None:intergenic 40.0%
TAGACAAGTTAGAGAAAGCG+TGG - chr2_3:60700169-60700188 None:intergenic 40.0%
GGGAGTTCATTAGTGATAAC+AGG + chr2_3:60700230-60700249 Msa0303520:intron 40.0%
AACGTTTGCTTCATTCATGC+AGG + chr2_3:60700499-60700518 Msa0303520:intron 40.0%
ATTCATGCAGGTTTGCCTTA+TGG + chr2_3:60700511-60700530 Msa0303520:intron 40.0%
!! CAAATTTTGGTAGTCCAGAG+GGG + chr2_3:60700536-60700555 Msa0303520:CDS 40.0%
!! AAATTTTGGTAGTCCAGAGG+GGG + chr2_3:60700537-60700556 Msa0303520:CDS 40.0%
ACACCATATCCATCTGCATA+TGG - chr2_3:60700574-60700593 None:intergenic 40.0%
AGATGGATATGGTGTTCACA+TGG + chr2_3:60700579-60700598 Msa0303520:CDS 40.0%
CTTTGCTTGTGCTTCTGTTT+AGG + chr2_3:60700664-60700683 Msa0303520:intron 40.0%
CAGAGAAAGGTCCTCTTTAT+GGG + chr2_3:60700693-60700712 Msa0303520:CDS 40.0%
AGAGAAAGGTCCTCTTTATG+GGG + chr2_3:60700694-60700713 Msa0303520:CDS 40.0%
ACTTCGCTAACACAGCTAAA+GGG - chr2_3:60700814-60700833 None:intergenic 40.0%
TACTTCGCTAACACAGCTAA+AGG - chr2_3:60700815-60700834 None:intergenic 40.0%
ATATGGTTTCTGTTGGTCAC+GGG + chr2_3:60701103-60701122 Msa0303520:intron 40.0%
AATCATGTGAGCTGAAGTTC+AGG + chr2_3:60701174-60701193 Msa0303520:intron 40.0%
TTGTGCTCTGGTTAAACAAG+TGG + chr2_3:60701259-60701278 Msa0303520:intron 40.0%
! GCCCAATGTGTTTTATGTCA+AGG + chr2_3:60701286-60701305 Msa0303520:intron 40.0%
CATGCCCATGAAATGAACAT+TGG - chr2_3:60701677-60701696 None:intergenic 40.0%
!! TTTGGAAGTGCTTGCTGTTA+TGG + chr2_3:60701728-60701747 Msa0303520:intron 40.0%
! GAAGTTTCCGTACTCACTTT+TGG + chr2_3:60701750-60701769 Msa0303520:intron 40.0%
! GTTGACTCCAAAAGTGAGTA+CGG - chr2_3:60701760-60701779 None:intergenic 40.0%
! TGTCATGCCACTTCAATCAA+AGG - chr2_3:60701927-60701946 None:intergenic 40.0%
GAATGCCAACTTAACTGAAC+TGG - chr2_3:60701990-60702009 None:intergenic 40.0%
AACCACAAGTATGTTGCACA+TGG + chr2_3:60702029-60702048 Msa0303520:intron 40.0%
ATCCATGTGCAACATACTTG+TGG - chr2_3:60702034-60702053 None:intergenic 40.0%
TTTACTGAGATTGAAGTCGG+TGG + chr2_3:60702212-60702231 Msa0303520:intron 40.0%
CAATAGTATTTAAGGGGGTG+GGG + chr2_3:60702348-60702367 Msa0303520:intron 40.0%
!! TTTCTCTGCGAAGTTTTTGG+TGG + chr2_3:60702551-60702570 Msa0303520:intron 40.0%
! TAACTACTGCTGTTTGCTAG+AGG + chr2_3:60702581-60702600 Msa0303520:intron 40.0%
! AACTACTGCTGTTTGCTAGA+GGG + chr2_3:60702582-60702601 Msa0303520:intron 40.0%
!!! GGGATGCATTTGTTTTGAAC+TGG + chr2_3:60702619-60702638 Msa0303520:intron 40.0%
ATCTACCATCACCATACTTG+TGG - chr2_3:60702749-60702768 None:intergenic 40.0%
!! ACAAGTATGGTGATGGTAGA+TGG + chr2_3:60702748-60702767 Msa0303520:intron 40.0%
!! CAAGTATGGTGATGGTAGAT+GGG + chr2_3:60702749-60702768 Msa0303520:intron 40.0%
!! AAGTATGGTGATGGTAGATG+GGG + chr2_3:60702750-60702769 Msa0303520:intron 40.0%
! CTGGTCTTCAAATATTCCAC+GGG - chr2_3:60702830-60702849 None:intergenic 40.0%
! GGATTTTCAGCATAATGGTC+AGG + chr2_3:60703173-60703192 Msa0303520:intron 40.0%
CTGGAGCTAAAATGATTCGA+CGG + chr2_3:60703274-60703293 Msa0303520:intron 40.0%
CAATAAGTGAATCCCAACAC+TGG - chr2_3:60703542-60703561 None:intergenic 40.0%
CAATAAGTGAATCCCAAGAC+TGG - chr2_3:60703578-60703597 None:intergenic 40.0%
!! TGAAGGGCATTAAAATCTGG+GGG + chr2_3:60703628-60703647 Msa0303520:intron 40.0%
ATTAAAATCTGGGGGCTTAG+AGG + chr2_3:60703636-60703655 Msa0303520:intron 40.0%
! AATTCGAATCAGTGGACTCT+TGG + chr2_3:60703721-60703740 Msa0303520:intron 40.0%
TAGTGGAATAGATGAACCAC+CGG + chr2_3:60703766-60703785 Msa0303520:intron 40.0%
!! GAGGTTATTAGTGGACTTCA+TGG + chr2_3:60703917-60703936 Msa0303520:intron 40.0%
!! GGTTATTAGTGGACTTCATG+GGG + chr2_3:60703919-60703938 Msa0303520:intron 40.0%
!! GAGAGCTGGAAACCATTTTT+GGG + chr2_3:60704194-60704213 Msa0303520:three_prime_UTR 40.0%
! CATAATGCTGCGAGATTTTG+CGG + chr2_3:60704247-60704266 Msa0303520:three_prime_UTR 40.0%
AGCCCATAATACATTTCACC+CGG - chr2_3:60704310-60704329 None:intergenic 40.0%
! GTGAAATGTATTATGGGCTG+AGG + chr2_3:60704311-60704330 Msa0303520:three_prime_UTR 40.0%
GTGTTATCTTGATCCATCAC+AGG - chr2_3:60704365-60704384 None:intergenic 40.0%
! AAGCATATAGTAAGGCACCA+AGG - chr2_3:60704599-60704618 None:intergenic 40.0%
CCGATGGTTTAATTGTGCTT+TGG + chr2_3:60704671-60704690 Msa0303520:three_prime_UTR 40.0%
! GGGGGTGACAATCTAAAATT+TGG - chr2_3:60704715-60704734 None:intergenic 40.0%
AATGCACAAGCCCAACTAAA+GGG - chr2_3:60704759-60704778 None:intergenic 40.0%
AAATGCACAAGCCCAACTAA+AGG - chr2_3:60704760-60704779 None:intergenic 40.0%
AGTTTCTTGCACGCTCTATT+TGG + chr2_3:60704818-60704837 Msa0303520:three_prime_UTR 40.0%
!!! CGTGTTTTGGAGGTTTCTAT+AGG + chr2_3:60704865-60704884 Msa0303520:three_prime_UTR 40.0%
TATAGGGTATGTATGCCGTT+CGG + chr2_3:60704882-60704901 Msa0303520:three_prime_UTR 40.0%
TTCGGATTATAGGATCCGAA+CGG - chr2_3:60704900-60704919 None:intergenic 40.0%
GTAGGAAATGTACCTACTGA+TGG + chr2_3:60705004-60705023 Msa0303520:three_prime_UTR 40.0%
AGGAAATGTACCTACTGATG+GGG + chr2_3:60705006-60705025 Msa0303520:three_prime_UTR 40.0%
GCATACTATCCAAATCCTAG+TGG - chr2_3:60705151-60705170 None:intergenic 40.0%
GGATTTGGATAGTATGCATG+AGG + chr2_3:60705154-60705173 Msa0303520:three_prime_UTR 40.0%
TGAGTTATACGGCGTCGTTT+GGG - chr2_3:60698443-60698462 None:intergenic 45.0%
TTGAGTTATACGGCGTCGTT+TGG - chr2_3:60698444-60698463 None:intergenic 45.0%
! TTGGTGGCTCTCTATGAACA+CGG - chr2_3:60699024-60699043 None:intergenic 45.0%
TCTAACAATGCTGGATGAGG+TGG - chr2_3:60699121-60699140 None:intergenic 45.0%
ACCTCATCCAGCATTGTTAG+AGG + chr2_3:60699120-60699139 Msa0303520:CDS 45.0%
TCCTCTAACAATGCTGGATG+AGG - chr2_3:60699124-60699143 None:intergenic 45.0%
AGCTCTTCCTCTAACAATGC+TGG - chr2_3:60699130-60699149 None:intergenic 45.0%
AAGTGCAGCATGCTGAAATG+AGG + chr2_3:60699152-60699171 Msa0303520:CDS 45.0%
CTGAACATGAGATGCATTCG+AGG + chr2_3:60699290-60699309 Msa0303520:CDS 45.0%
GAAGGCAAACATGGAGTTCA+TGG + chr2_3:60699683-60699702 Msa0303520:CDS 45.0%
ACATGGAGTTCATGGAACAG+AGG + chr2_3:60699691-60699710 Msa0303520:CDS 45.0%
CTAGCATGGATGGAAGACAT+TGG + chr2_3:60699778-60699797 Msa0303520:CDS 45.0%
AGCATGGATGGAAGACATTG+GGG + chr2_3:60699780-60699799 Msa0303520:CDS 45.0%
! TAGAGAAAGCGTGGGAGTTA+AGG - chr2_3:60700160-60700179 None:intergenic 45.0%
!! TCTTTTGACTGGCAGTGTTG+AGG + chr2_3:60700274-60700293 Msa0303520:intron 45.0%
!! CTTTTGACTGGCAGTGTTGA+GGG + chr2_3:60700275-60700294 Msa0303520:intron 45.0%
ATCCCACAAGGTGTATACGT+AGG + chr2_3:60700305-60700324 Msa0303520:intron 45.0%
TCCCACAAGGTGTATACGTA+GGG + chr2_3:60700306-60700325 Msa0303520:intron 45.0%
TCCCTACGTATACACCTTGT+GGG - chr2_3:60700310-60700329 None:intergenic 45.0%
ATCCCTACGTATACACCTTG+TGG - chr2_3:60700311-60700330 None:intergenic 45.0%
!! AATTTTGGTAGTCCAGAGGG+GGG + chr2_3:60700538-60700557 Msa0303520:CDS 45.0%
ATCCATCTGCATATGGAGGT+GGG - chr2_3:60700567-60700586 None:intergenic 45.0%
TATCCATCTGCATATGGAGG+TGG - chr2_3:60700568-60700587 None:intergenic 45.0%
CCATATCCATCTGCATATGG+AGG - chr2_3:60700571-60700590 None:intergenic 45.0%
CCTCCATATGCAGATGGATA+TGG + chr2_3:60700568-60700587 Msa0303520:CDS 45.0%
GCAGAGAAAGGTCCTCTTTA+TGG + chr2_3:60700692-60700711 Msa0303520:CDS 45.0%
AAAGGTCCTCTTTATGGGGT+GGG + chr2_3:60700698-60700717 Msa0303520:CDS 45.0%
TAGCTGTGTTAGCGAAGTAG+CGG + chr2_3:60700816-60700835 Msa0303520:three_prime_UTR 45.0%
! ACTGCAGCAATGTTTTCTCC+AGG - chr2_3:60700959-60700978 None:intergenic 45.0%
GCTCACATGATTCAACACGT+GGG - chr2_3:60701166-60701185 None:intergenic 45.0%
AGCTCACATGATTCAACACG+TGG - chr2_3:60701167-60701186 None:intergenic 45.0%
AGTTTAAATTCCTGCACCGG+TGG - chr2_3:60701389-60701408 None:intergenic 45.0%
CGATTGGATAACAATCTCCC+AGG + chr2_3:60701500-60701519 Msa0303520:intron 45.0%
TAACAATCTCCCAGGAATGC+TGG + chr2_3:60701508-60701527 Msa0303520:intron 45.0%
! GCAATATGTGGTCTTGCAAC+TGG + chr2_3:60701557-60701576 Msa0303520:intron 45.0%
TGCAAGCTCTCAATGATGAG+TGG + chr2_3:60701701-60701720 Msa0303520:intron 45.0%
! ACAACTGATGTTTGCTGGCA+TGG + chr2_3:60701877-60701896 Msa0303520:intron 45.0%
ATAGCAAGACAACACAGTGG+AGG - chr2_3:60702084-60702103 None:intergenic 45.0%
TGAGATTGAAGTCGGTGGTA+GGG + chr2_3:60702217-60702236 Msa0303520:intron 45.0%
GGAAACCACAAGTATGGTGA+TGG + chr2_3:60702741-60702760 Msa0303520:intron 45.0%
GCTCTTCTATGTTAGAAGGC+CGG + chr2_3:60702796-60702815 Msa0303520:intron 45.0%
GCACACCTGAATAGGATACT+AGG + chr2_3:60702973-60702992 Msa0303520:intron 45.0%
CTAACTGGGTATCCTATTCC+AGG - chr2_3:60703043-60703062 None:intergenic 45.0%
! GCTAATTGGTTCCAGAGTAC+AGG + chr2_3:60703458-60703477 Msa0303520:intron 45.0%
AACTGAGTGATCCTGTACTC+TGG - chr2_3:60703472-60703491 None:intergenic 45.0%
GTGGACTCTTGGAGTAAACT+TGG + chr2_3:60703732-60703751 Msa0303520:intron 45.0%
! TGCCTAGTATGTGGAGGTTT+TGG + chr2_3:60703791-60703810 Msa0303520:intron 45.0%
! GCCTAGTATGTGGAGGTTTT+GGG + chr2_3:60703792-60703811 Msa0303520:intron 45.0%
! CCTAGTATGTGGAGGTTTTG+GGG + chr2_3:60703793-60703812 Msa0303520:intron 45.0%
AACCTGCTTTCCAGCTAGAT+TGG + chr2_3:60703829-60703848 Msa0303520:intron 45.0%
TTCCAATCTAGCTGGAAAGC+AGG - chr2_3:60703834-60703853 None:intergenic 45.0%
!! TATTAGTGGACTTCATGGGG+TGG + chr2_3:60703922-60703941 Msa0303520:intron 45.0%
GGTGGTGAATGCTAGATGTT+TGG + chr2_3:60703940-60703959 Msa0303520:intron 45.0%
! GGAGAGCTGGAAACCATTTT+TGG + chr2_3:60704193-60704212 Msa0303520:three_prime_UTR 45.0%
CGCAAAATCTCGCAGCATTA+TGG - chr2_3:60704249-60704268 None:intergenic 45.0%
! TTCAATTGGGTTGTCCTCCT+TGG + chr2_3:60704579-60704598 Msa0303520:three_prime_UTR 45.0%
! CATATAGTAAGGCACCAAGG+AGG - chr2_3:60704596-60704615 None:intergenic 45.0%
GAAAGAGTTTATCAGCAGGG+CGG + chr2_3:60704633-60704652 Msa0303520:three_prime_UTR 45.0%
GTGCAAGAAACTCATAGGGT+GGG - chr2_3:60704810-60704829 None:intergenic 45.0%
GAGCGTGCAAGAAACTCATA+GGG - chr2_3:60704814-60704833 None:intergenic 45.0%
AGAGCGTGCAAGAAACTCAT+AGG - chr2_3:60704815-60704834 None:intergenic 45.0%
GGAAATGTACCTACTGATGG+GGG + chr2_3:60705007-60705026 Msa0303520:three_prime_UTR 45.0%
TCTTCCTACTCGCGTCTAAA+TGG - chr2_3:60705033-60705052 None:intergenic 45.0%
GATAGTATGCATGAGGTCCT+AGG + chr2_3:60705161-60705180 Msa0303520:three_prime_UTR 45.0%
!!! TTTATTTTTCAAATTATTAT+CGG + chr2_3:60698889-60698908 Msa0303520:intron 5.0%
TGTCGTGTTGGATCCTGACA+CGG - chr2_3:60698839-60698858 None:intergenic 50.0%
TACACGTGTCAGTGTCGTGT+TGG - chr2_3:60698851-60698870 None:intergenic 50.0%
CACCAATGAGTTCCCGAAGA+GGG + chr2_3:60699038-60699057 Msa0303520:CDS 50.0%
TACCCTCTTCGGGAACTCAT+TGG - chr2_3:60699043-60699062 None:intergenic 50.0%
!! TTCCCGAAGAGGGTATCCAT+CGG + chr2_3:60699048-60699067 Msa0303520:CDS 50.0%
TTCCGATGGATACCCTCTTC+GGG - chr2_3:60699053-60699072 None:intergenic 50.0%
CTTCCGATGGATACCCTCTT+CGG - chr2_3:60699054-60699073 None:intergenic 50.0%
! ATATGCTGTCGTGGCATTGG+TGG - chr2_3:60699097-60699116 None:intergenic 50.0%
GGAATATGCTGTCGTGGCAT+TGG - chr2_3:60699100-60699119 None:intergenic 50.0%
TGAGGTGGAATATGCTGTCG+TGG - chr2_3:60699106-60699125 None:intergenic 50.0%
TGCAGCATGCTGAAATGAGG+AGG + chr2_3:60699155-60699174 Msa0303520:CDS 50.0%
ACCAAGAACTGATGCGTGCT+AGG + chr2_3:60699527-60699546 Msa0303520:CDS 50.0%
ACCTAGCACGCATCAGTTCT+TGG - chr2_3:60699531-60699550 None:intergenic 50.0%
ACTGATGCGTGCTAGGTTTG+TGG + chr2_3:60699534-60699553 Msa0303520:intron 50.0%
CATGGAACAGAGGCAGTCAA+TGG + chr2_3:60699701-60699720 Msa0303520:CDS 50.0%
TTTCTCAACTTCTCGGGCCA+TGG - chr2_3:60699742-60699761 None:intergenic 50.0%
TTCCCACCTCCATATGCAGA+TGG + chr2_3:60700562-60700581 Msa0303520:CDS 50.0%
GTTTAGGCTGCTGCAGAGAA+AGG + chr2_3:60700680-60700699 Msa0303520:intron 50.0%
GAAAGGTCCTCTTTATGGGG+TGG + chr2_3:60700697-60700716 Msa0303520:CDS 50.0%
ATTCAACGACGGTTTGAGCG+AGG - chr2_3:60700752-60700771 None:intergenic 50.0%
AACACAGCTAAAGGGATGGC+AGG - chr2_3:60700806-60700825 None:intergenic 50.0%
CGCTAACACAGCTAAAGGGA+TGG - chr2_3:60700810-60700829 None:intergenic 50.0%
AACTCAGCATTGCAGCCATG+AGG + chr2_3:60701130-60701149 Msa0303520:intron 50.0%
GTGGGAGCTACAAAACCTCA+TGG - chr2_3:60701148-60701167 None:intergenic 50.0%
CAGACATCACCAGCATTCCT+GGG - chr2_3:60701520-60701539 None:intergenic 50.0%
TCAGACATCACCAGCATTCC+TGG - chr2_3:60701521-60701540 None:intergenic 50.0%
! TGTGGTCTTGCAACTGGTGA+AGG + chr2_3:60701563-60701582 Msa0303520:intron 50.0%
! ACTGATGTTTGCTGGCATGG+AGG + chr2_3:60701880-60701899 Msa0303520:intron 50.0%
! CTGATGTTTGCTGGCATGGA+GGG + chr2_3:60701881-60701900 Msa0303520:intron 50.0%
CTGAGATTGAAGTCGGTGGT+AGG + chr2_3:60702216-60702235 Msa0303520:intron 50.0%
GAAGTCGGTGGTAGGGATAT+AGG + chr2_3:60702224-60702243 Msa0303520:intron 50.0%
TGTCTGGACTCTGGTGGTAT+TGG + chr2_3:60702425-60702444 Msa0303520:intron 50.0%
! TACTGCTGTTTGCTAGAGGG+TGG + chr2_3:60702585-60702604 Msa0303520:intron 50.0%
TAGAGGGTGGCTGTTGTTAG+TGG + chr2_3:60702598-60702617 Msa0303520:intron 50.0%
AGAGGGTGGCTGTTGTTAGT+GGG + chr2_3:60702599-60702618 Msa0303520:intron 50.0%
GGATGGGGAAACCACAAGTA+TGG + chr2_3:60702735-60702754 Msa0303520:intron 50.0%
TTCAAATATTCCACGGGCCC+AGG - chr2_3:60702824-60702843 None:intergenic 50.0%
ATTCGACGGATACTTGGAGC+TGG + chr2_3:60703288-60703307 Msa0303520:intron 50.0%
TGGAGCTGGCTGAAGTTGTA+TGG + chr2_3:60703302-60703321 Msa0303520:intron 50.0%
AGCTGGCTGAAGTTGTATGG+TGG + chr2_3:60703305-60703324 Msa0303520:intron 50.0%
GTTACTGGGCTTCTAATCCG+AGG + chr2_3:60703369-60703388 Msa0303520:intron 50.0%
TGGGCTTCTAATCCGAGGAA+AGG + chr2_3:60703374-60703393 Msa0303520:intron 50.0%
CCTCCACATACTAGGCAAAC+CGG - chr2_3:60703788-60703807 None:intergenic 50.0%
CCCCAAAACCTCCACATACT+AGG - chr2_3:60703796-60703815 None:intergenic 50.0%
TATGGTTGCAGATGGAGAGC+TGG + chr2_3:60704180-60704199 Msa0303520:intron 50.0%
TCGCAGCATTATGGTGTGTG+GGG - chr2_3:60704240-60704259 None:intergenic 50.0%
CTCGCAGCATTATGGTGTGT+GGG - chr2_3:60704241-60704260 None:intergenic 50.0%
TCTCGCAGCATTATGGTGTG+TGG - chr2_3:60704242-60704261 None:intergenic 50.0%
! ATTATGGGCTGAGGGCAAGT+AGG + chr2_3:60704320-60704339 Msa0303520:three_prime_UTR 50.0%
! TTATGGGCTGAGGGCAAGTA+GGG + chr2_3:60704321-60704340 Msa0303520:three_prime_UTR 50.0%
CGTGCAAGAAACTCATAGGG+TGG - chr2_3:60704811-60704830 None:intergenic 50.0%
TCCGAACTTCATAGAGCGTG+CGG + chr2_3:60704914-60704933 Msa0303520:three_prime_UTR 50.0%
TCTAAATGGCCCCCATCAGT+AGG - chr2_3:60705019-60705038 None:intergenic 50.0%
GGAGGTAACGACTTCAACCT+AGG - chr2_3:60705181-60705200 None:intergenic 50.0%
AAGAAGAGGGTCGCGTACGA+TGG - chr2_3:60698517-60698536 None:intergenic 55.0%
ATGGAAGACGTGTCCGTGTC+AGG + chr2_3:60698823-60698842 Msa0303520:intron 55.0%
CCTCTTCGGGAACTCATTGG+TGG - chr2_3:60699040-60699059 None:intergenic 55.0%
CCACCAATGAGTTCCCGAAG+AGG + chr2_3:60699037-60699056 Msa0303520:CDS 55.0%
!! CGAAGAGGGTATCCATCGGA+AGG + chr2_3:60699052-60699071 Msa0303520:CDS 55.0%
CGAGCATAAGGACCTTCCGA+TGG - chr2_3:60699067-60699086 None:intergenic 55.0%
TCGGAAGGTCCTTATGCTCG+CGG + chr2_3:60699067-60699086 Msa0303520:CDS 55.0%
GCATGCTGAAATGAGGAGGC+TGG + chr2_3:60699159-60699178 Msa0303520:CDS 55.0%
TGCTGAAATGAGGAGGCTGG+TGG + chr2_3:60699162-60699181 Msa0303520:CDS 55.0%
TGAAATGAGGAGGCTGGTGG+CGG + chr2_3:60699165-60699184 Msa0303520:CDS 55.0%
!! TCGTGCTGAGCTTGCTAGCA+TGG + chr2_3:60699764-60699783 Msa0303520:CDS 55.0%
!! GCTGAGCTTGCTAGCATGGA+TGG + chr2_3:60699768-60699787 Msa0303520:CDS 55.0%
GATGGAAGACATTGGGGAGC+TGG + chr2_3:60699786-60699805 Msa0303520:CDS 55.0%
! TTGACTGGCAGTGTTGAGGG+TGG + chr2_3:60700278-60700297 Msa0303520:intron 55.0%
GCAGTACCCACCCCATAAAG+AGG - chr2_3:60700707-60700726 None:intergenic 55.0%
! ATGGGGTGGGTACTGCTTCT+AGG + chr2_3:60700711-60700730 Msa0303520:CDS 55.0%
!! TGGTGTTGCCGTTTGTGCTC+TGG + chr2_3:60701247-60701266 Msa0303520:intron 55.0%
ACTGTCGGAGAAGTCACCAC+CGG + chr2_3:60701370-60701389 Msa0303520:intron 55.0%
! ATGTTTGCTGGCATGGAGGG+TGG + chr2_3:60701884-60701903 Msa0303520:intron 55.0%
TATGTTAGAAGGCCGGTGCC+TGG + chr2_3:60702803-60702822 Msa0303520:intron 55.0%
ATGTTAGAAGGCCGGTGCCT+GGG + chr2_3:60702804-60702823 Msa0303520:intron 55.0%
CCACATACTAGGCAAACCGG+TGG - chr2_3:60703785-60703804 None:intergenic 55.0%
!! CCACCGGTTTGCCTAGTATG+TGG + chr2_3:60703782-60703801 Msa0303520:intron 55.0%
! CCGGTTTGCCTAGTATGTGG+AGG + chr2_3:60703785-60703804 Msa0303520:intron 55.0%
CCCGCACGCTCTATGAAGTT+CGG - chr2_3:60704918-60704937 None:intergenic 55.0%
CCGAACTTCATAGAGCGTGC+GGG + chr2_3:60704915-60704934 Msa0303520:three_prime_UTR 55.0%
AGAGCGTGCGGGAAACTCAT+AGG + chr2_3:60704926-60704945 Msa0303520:three_prime_UTR 55.0%
CGTGCGGGAAACTCATAGGT+TGG + chr2_3:60704930-60704949 Msa0303520:three_prime_UTR 55.0%
CGGAAGGTCCTTATGCTCGC+GGG + chr2_3:60699068-60699087 Msa0303520:CDS 60.0%
!! TGCTGTCGTGGCATTGGTGG+TGG - chr2_3:60699094-60699113 None:intergenic 60.0%
AGACCTTGCAGCTGCGAAGG+AGG + chr2_3:60699228-60699247 Msa0303520:CDS 60.0%
! ACTGGCAGTGTTGAGGGTGG+TGG + chr2_3:60700281-60700300 Msa0303520:intron 60.0%
! GAGGGTGGTGGTATCCCACA+AGG + chr2_3:60700293-60700312 Msa0303520:intron 60.0%
CTGAGGGCAAGTAGGGCACA+GGG + chr2_3:60704328-60704347 Msa0303520:three_prime_UTR 60.0%
GGGGCCATTTAGACGCGAGT+AGG + chr2_3:60705026-60705045 Msa0303520:three_prime_UTR 60.0%
!! GGAGGCTGGTGGCGGATAAC+AGG + chr2_3:60699173-60699192 Msa0303520:CDS 65.0%
!! GGCTGGTGGCGGATAACAGG+AGG + chr2_3:60699176-60699195 Msa0303520:CDS 65.0%
GCGAGACCTTGCAGCTGCGA+AGG + chr2_3:60699225-60699244 Msa0303520:CDS 65.0%
GCTCCTCCTTCGCAGCTGCA+AGG - chr2_3:60699234-60699253 None:intergenic 65.0%
GGAGAAGTCACCACCGGTGC+AGG + chr2_3:60701376-60701395 Msa0303520:intron 65.0%
TTGCTGGCATGGAGGGTGGC+TGG + chr2_3:60701888-60701907 Msa0303520:intron 65.0%
TATTCCACGGGCCCAGGCAC+CGG - chr2_3:60702818-60702837 None:intergenic 65.0%
GCTGAGGGCAAGTAGGGCAC+AGG + chr2_3:60704327-60704346 Msa0303520:three_prime_UTR 65.0%
! GGTGGTGGCCCGCGAGCATA+AGG - chr2_3:60699079-60699098 None:intergenic 70.0%
GGAGGTGGGAAACCCCCCTC+TGG - chr2_3:60700553-60700572 None:intergenic 70.0%
! AAGGCCGGTGCCTGGGCCCG+TGG + chr2_3:60702811-60702830 Msa0303520:intron 80.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 60698422 60705256 60698422 ID=Msa0303520;Name=Msa0303520
chr2_3 mRNA 60698422 60705256 60698422 ID=Msa0303520-mRNA-1;Parent=Msa0303520;Name=Msa0303520-mRNA-1;_AED=0.04;_eAED=0.04;_QI=182|1|1|1|0.6|0.5|6|1166|283
chr2_3 exon 60698422 60698593 60698422 ID=Msa0303520-mRNA-1:exon:19837;Parent=Msa0303520-mRNA-1
chr2_3 exon 60698997 60699548 60698997 ID=Msa0303520-mRNA-1:exon:19838;Parent=Msa0303520-mRNA-1
chr2_3 exon 60699662 60699807 60699662 ID=Msa0303520-mRNA-1:exon:19839;Parent=Msa0303520-mRNA-1
chr2_3 exon 60700521 60700600 60700521 ID=Msa0303520-mRNA-1:exon:19840;Parent=Msa0303520-mRNA-1
chr2_3 exon 60700686 60700869 60700686 ID=Msa0303520-mRNA-1:exon:19841;Parent=Msa0303520-mRNA-1
chr2_3 exon 60704191 60705256 60704191 ID=Msa0303520-mRNA-1:exon:19842;Parent=Msa0303520-mRNA-1
chr2_3 five_prime_UTR 60698422 60698593 60698422 ID=Msa0303520-mRNA-1:five_prime_utr;Parent=Msa0303520-mRNA-1
chr2_3 five_prime_UTR 60698997 60699006 60698997 ID=Msa0303520-mRNA-1:five_prime_utr;Parent=Msa0303520-mRNA-1
chr2_3 CDS 60699007 60699548 60699007 ID=Msa0303520-mRNA-1:cds;Parent=Msa0303520-mRNA-1
chr2_3 CDS 60699662 60699807 60699662 ID=Msa0303520-mRNA-1:cds;Parent=Msa0303520-mRNA-1
chr2_3 CDS 60700521 60700600 60700521 ID=Msa0303520-mRNA-1:cds;Parent=Msa0303520-mRNA-1
chr2_3 CDS 60700686 60700769 60700686 ID=Msa0303520-mRNA-1:cds;Parent=Msa0303520-mRNA-1
chr2_3 three_prime_UTR 60700770 60700869 60700770 ID=Msa0303520-mRNA-1:three_prime_utr;Parent=Msa0303520-mRNA-1
chr2_3 three_prime_UTR 60704191 60705256 60704191 ID=Msa0303520-mRNA-1:three_prime_utr;Parent=Msa0303520-mRNA-1
Gene Sequence

>Msa0303520

ATGGGATCAAGACACCGTGTTCATAGAGAGCCACCAATGAGTTCCCGAAGAGGGTATCCATCGGAAGGTCCTTATGCTCGCGGGCCACCACCAATGCCACGACAGCATATTCCACCTCATCCAGCATTGTTAGAGGAAGAGCTTGAAGTGCAGCATGCTGAAATGAGGAGGCTGGTGGCGGATAACAGGAGGTTGATTGATGATCGGATGACGTTGCAGCGAGACCTTGCAGCTGCGAAGGAGGAGCTTCATCGTATGAATTTAGCGATTGGCGATATTCGTGCTGAACATGAGATGCATTCGAGGGAGCTTGTTGATAAAAATATGAAGTTGGAGTCTGATCTTAGGTCGACTGAGCCGTTGAAGAATGAAGTTATACAACTGCGAGCTGAAGTTCAAAAACTTAGTAGTATCAAACAAGAACTTTCTGGGAAGGTCCAGACACTTACGAAAGATGTTTCTAGGTTACAGTCTGATAATCAACAAATTCCTTCAATGAGATCTGAGATTGATGGTTTGCACCAAGAACTGATGCGTGCTAGAACTATGGTGGATTATGAAAAGAAGGCAAACATGGAGTTCATGGAACAGAGGCAGTCAATGGAGAAAAACATGGTTTCCATGGCCCGAGAAGTTGAGAAACTTCGTGCTGAGCTTGCTAGCATGGATGGAAGACATTGGGGAGCTGGTTTGCCTTATGGAACAAATTTTGGTAGTCCAGAGGGGGGTTTCCCACCTCCATATGCAGATGGATATGGTGTTCACATGGCTGCTGCAGAGAAAGGTCCTCTTTATGGGGTGGGTACTGCTTCTAGGAAAGCACACGAGAAGCCTCGCTCAAACCGTCGTTGA
Protein sequence

>Msa0303520

MGSRHRVHREPPMSSRRGYPSEGPYARGPPPMPRQHIPPHPALLEEELEVQHAEMRRLVADNRRLIDDRMTLQRDLAAAKEELHRMNLAIGDIRAEHEMHSRELVDKNMKLESDLRSTEPLKNEVIQLRAEVQKLSSIKQELSGKVQTLTKDVSRLQSDNQQIPSMRSEIDGLHQELMRARTMVDYEKKANMEFMEQRQSMEKNMVSMAREVEKLRAELASMDGRHWGAGLPYGTNFGSPEGGFPPPYADGYGVHMAAAEKGPLYGVGTASRKAHEKPRSNRR*