Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0203040 | XP_013441671.1 | 96.602 | 206 | 7 | 0 | 1 | 206 | 1 | 206 | 3.11e-144 | 410 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0203040 | sp|Q9ZUF7|LOR6_ARATH | 56.000 | 200 | 76 | 3 | 7 | 206 | 4 | 191 | 1.45e-75 | 228 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0203040 | G7IGE6 | 96.602 | 206 | 7 | 0 | 1 | 206 | 1 | 206 | 1.48e-144 | 410 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017320 | Msa0203040 | 0.809051 | 2.290880e-50 | -8.615850e-47 |
| Msa0026430 | Msa0203040 | 0.817937 | 2.544299e-52 | -8.615850e-47 |
| Msa0026910 | Msa0203040 | 0.809986 | 1.442315e-50 | -8.615850e-47 |
| Msa0045340 | Msa0203040 | 0.805700 | 1.175894e-49 | -8.615850e-47 |
| Msa0051630 | Msa0203040 | 0.827195 | 1.789316e-54 | -8.615850e-47 |
| Msa0051740 | Msa0203040 | 0.826425 | 2.732349e-54 | -8.615850e-47 |
| Msa0051750 | Msa0203040 | 0.813605 | 2.351724e-51 | -8.615850e-47 |
| Msa0054820 | Msa0203040 | 0.817852 | 2.659043e-52 | -8.615850e-47 |
| Msa0074750 | Msa0203040 | 0.816812 | 4.559110e-52 | -8.615850e-47 |
| Msa0081650 | Msa0203040 | 0.803567 | 3.277207e-49 | -8.615850e-47 |
| Msa0100160 | Msa0203040 | 0.807268 | 5.491866e-50 | -8.615850e-47 |
| Msa0146080 | Msa0203040 | 0.815719 | 8.004255e-52 | -8.615850e-47 |
| Msa0183420 | Msa0203040 | 0.801946 | 7.082450e-49 | -8.615850e-47 |
| Msa0187490 | Msa0203040 | 0.813090 | 3.051432e-51 | -8.615850e-47 |
| Msa0203040 | Msa0218350 | 0.811736 | 6.031493e-51 | -8.615850e-47 |
| Msa0203040 | Msa0227230 | 0.815657 | 8.263183e-52 | -8.615850e-47 |
| Msa0203040 | Msa0246230 | 0.977546 | 5.358079e-144 | -8.615850e-47 |
| Msa0203040 | Msa0271790 | 0.807269 | 5.488329e-50 | -8.615850e-47 |
| Msa0203040 | Msa0284740 | 0.937003 | 7.011675e-98 | -8.615850e-47 |
| Msa0203040 | Msa0290760 | 0.810170 | 1.316812e-50 | -8.615850e-47 |
| Msa0203040 | Msa0303460 | 0.806452 | 8.169612e-50 | -8.615850e-47 |
| Msa0203040 | Msa0303520 | 0.815352 | 9.661116e-52 | -8.615850e-47 |
| Msa0203040 | Msa0310430 | 0.807325 | 5.341806e-50 | -8.615850e-47 |
| Msa0203040 | Msa0347950 | 0.804972 | 1.671022e-49 | -8.615850e-47 |
| Msa0203040 | Msa0347990 | 0.806376 | 8.479044e-50 | -8.615850e-47 |
| Msa0203040 | Msa0376910 | 0.807765 | 4.308415e-50 | -8.615850e-47 |
| Msa0203040 | Msa0377440 | 0.801648 | 8.155290e-49 | -8.615850e-47 |
| Msa0203040 | Msa0378970 | 0.808599 | 2.861640e-50 | -8.615850e-47 |
| Msa0203040 | Msa0382310 | 0.801558 | 8.508439e-49 | -8.615850e-47 |
| Msa0203040 | Msa0387050 | 0.811418 | 7.069724e-51 | -8.615850e-47 |
| Msa0203040 | Msa0394690 | 0.804019 | 2.640814e-49 | -8.615850e-47 |
| Msa0203040 | Msa0428050 | 0.802294 | 6.007796e-49 | -8.615850e-47 |
| Msa0203040 | Msa0428580 | 0.804933 | 1.703188e-49 | -8.615850e-47 |
| Msa0203040 | Msa0431210 | 0.816332 | 5.841715e-52 | -8.615850e-47 |
| Msa0203040 | Msa0471900 | 0.815131 | 1.081922e-51 | -8.615850e-47 |
| Msa0203040 | Msa0474940 | 0.806271 | 8.919212e-50 | -8.615850e-47 |
| Msa0203040 | Msa0483740 | 0.805145 | 1.537756e-49 | -8.615850e-47 |
| Msa0203040 | Msa0517090 | 0.808013 | 3.814967e-50 | -8.615850e-47 |
| Msa0203040 | Msa0520270 | 0.803636 | 3.171486e-49 | -8.615850e-47 |
| Msa0203040 | Msa0559500 | 0.807634 | 4.592916e-50 | -8.615850e-47 |
| Msa0203040 | Msa0560500 | 0.815281 | 1.002022e-51 | -8.615850e-47 |
| Msa0203040 | Msa0590650 | 0.801652 | 8.139363e-49 | -8.615850e-47 |
| Msa0203040 | Msa0594200 | 0.803512 | 3.365702e-49 | -8.615850e-47 |
| Msa0203040 | Msa0614510 | 0.809919 | 1.491267e-50 | -8.615850e-47 |
| Msa0203040 | Msa0618950 | 0.801743 | 7.797144e-49 | -8.615850e-47 |
| Msa0203040 | Msa0626220 | 0.801600 | 8.340091e-49 | -8.615850e-47 |
| Msa0203040 | Msa0652690 | 0.802985 | 4.325666e-49 | -8.615850e-47 |
| Msa0203040 | Msa0658680 | 0.810017 | 1.420291e-50 | -8.615850e-47 |
| Msa0203040 | Msa0689420 | 0.801109 | 1.051176e-48 | -8.615850e-47 |
| Msa0203040 | Msa0709160 | 0.831388 | 1.717282e-55 | -8.615850e-47 |
| Msa0203040 | Msa0732600 | 0.820995 | 5.108886e-53 | -8.615850e-47 |
| Msa0203040 | Msa0818890 | 0.812353 | 4.425750e-51 | -8.615850e-47 |
| Msa0203040 | Msa0842770 | 0.806171 | 9.363943e-50 | -8.615850e-47 |
| Msa0203040 | Msa0866400 | 0.820244 | 7.596869e-53 | -8.615850e-47 |
| Msa0203040 | Msa0866410 | 0.809469 | 1.863445e-50 | -8.615850e-47 |
| Msa0203040 | Msa0945240 | 0.801351 | 9.381426e-49 | -8.615850e-47 |
| Msa0203040 | Msa0970530 | 0.803218 | 3.872497e-49 | -8.615850e-47 |
| Msa0203040 | Msa0970600 | 0.805342 | 1.398321e-49 | -8.615850e-47 |
| Msa0203040 | Msa0992600 | 0.800151 | 1.649048e-48 | -8.615850e-47 |
| Msa0203040 | Msa1063420 | 0.818123 | 2.310270e-52 | -8.615850e-47 |
| Msa0203040 | Msa1077070 | 0.825093 | 5.657073e-54 | -8.615850e-47 |
| Msa0203040 | Msa1098890 | 0.806221 | 9.138947e-50 | -8.615850e-47 |
| Msa0203040 | Msa1122780 | 0.820641 | 6.161535e-53 | -8.615850e-47 |
| Msa0203040 | Msa1127430 | 0.815912 | 7.249987e-52 | -8.615850e-47 |
| Msa0203040 | Msa1130530 | 0.803776 | 2.966302e-49 | -8.615850e-47 |
| Msa0203040 | Msa1174850 | 0.802561 | 5.291104e-49 | -8.615850e-47 |
| Msa0203040 | Msa1201640 | 0.800156 | 1.644975e-48 | -8.615850e-47 |
| Msa0203040 | Msa1215070 | 0.809373 | 1.954046e-50 | -8.615850e-47 |
| Msa0203040 | Msa1253450 | 0.818252 | 2.160052e-52 | -8.615850e-47 |
| Msa0203040 | Msa1257070 | 0.801816 | 7.533172e-49 | -8.615850e-47 |
| Msa0203040 | Msa1263290 | -0.808879 | 2.493392e-50 | -8.615850e-47 |
| Msa0203040 | Msa1270660 | 0.830238 | 3.286218e-55 | -8.615850e-47 |
| Msa0203040 | Msa1270730 | 0.811682 | 6.195225e-51 | -8.615850e-47 |
| Msa0203040 | Msa1286550 | 0.806350 | 8.582905e-50 | -8.615850e-47 |
| Msa0203040 | Msa1305350 | 0.801039 | 1.086594e-48 | -8.615850e-47 |
| Msa0203040 | Msa1330180 | 0.801825 | 7.500776e-49 | -8.615850e-47 |
| Msa0203040 | Msa1333420 | 0.818021 | 2.435412e-52 | -8.615850e-47 |
| Msa0203040 | Msa1336040 | 0.820946 | 5.242797e-53 | -8.615850e-47 |
| Msa0203040 | Msa1341490 | 0.819170 | 1.336631e-52 | -8.615850e-47 |
| Msa0203040 | Msa1359560 | 0.806082 | 9.774135e-50 | -8.615850e-47 |
| Msa0203040 | Msa1372290 | 0.809316 | 2.009961e-50 | -8.615850e-47 |
| Msa0203040 | Msa1376130 | 0.805970 | 1.032016e-49 | -8.615850e-47 |
| Msa0203040 | Msa1377570 | 0.808360 | 3.218204e-50 | -8.615850e-47 |
| Msa0203040 | Msa1438520 | 0.805368 | 1.380618e-49 | -8.615850e-47 |
| Msa0203040 | Msa1450720 | 0.811999 | 5.287085e-51 | -8.615850e-47 |
| Msa0203040 | Msa1458810 | 0.809272 | 2.053669e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0203040 | MtrunA17_Chr2g0300771 | 96.602 | 206 | 7 | 0 | 1 | 206 | 1 | 206 | 2.86e-148 | 410 |
| Msa0203040 | MtrunA17_Chr4g0003271 | 30.144 | 209 | 129 | 7 | 1 | 205 | 1 | 196 | 1.14e-22 | 90.9 |
| Msa0203040 | MtrunA17_Chr2g0333111 | 29.703 | 202 | 125 | 7 | 7 | 204 | 19 | 207 | 8.43e-17 | 75.9 |
| Msa0203040 | MtrunA17_Chr7g0244321 | 28.342 | 187 | 123 | 5 | 12 | 197 | 28 | 204 | 1.49e-16 | 74.7 |
| Msa0203040 | MtrunA17_Chr2g0333101 | 30.726 | 179 | 107 | 7 | 30 | 204 | 41 | 206 | 3.96e-16 | 73.9 |
| Msa0203040 | MtrunA17_Chr7g0244331 | 27.638 | 199 | 127 | 7 | 5 | 199 | 21 | 206 | 3.20e-15 | 71.2 |
| Msa0203040 | MtrunA17_Chr7g0244341 | 26.633 | 199 | 135 | 5 | 5 | 202 | 21 | 209 | 8.60e-15 | 70.5 |
| Msa0203040 | MtrunA17_Chr7g0244361 | 24.257 | 202 | 129 | 6 | 5 | 196 | 45 | 232 | 9.73e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0203040 | AT2G05910.1 | 56.000 | 200 | 76 | 3 | 7 | 206 | 4 | 191 | 1.48e-76 | 228 |
| Msa0203040 | AT5G20640.1 | 50.000 | 208 | 98 | 4 | 4 | 206 | 9 | 215 | 9.64e-69 | 209 |
| Msa0203040 | AT3G15810.1 | 28.358 | 201 | 125 | 7 | 7 | 203 | 20 | 205 | 4.16e-17 | 77.0 |
| Msa0203040 | AT1G80120.1 | 26.471 | 204 | 128 | 8 | 7 | 203 | 6 | 194 | 1.15e-11 | 62.0 |
Find 58 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTACACTTGACTACATTTA+TGG | 0.127172 | 2_1:-26362033 | Msa0203040:CDS |
| AACAAGGATTTCAAGCTTCT+TGG | 0.214724 | 2_1:+26363822 | None:intergenic |
| AGGCTGGGACTTTGAGATTA+GGG | 0.292979 | 2_1:-26363015 | Msa0203040:CDS |
| TATTTGAGCCAATATTATAT+TGG | 0.315483 | 2_1:+26361930 | None:intergenic |
| ACAATGCTGCAATGCTTGTC+AGG | 0.358681 | 2_1:+26362984 | None:intergenic |
| TTAACCAAACATGAATTTCC+AGG | 0.375687 | 2_1:+26363086 | None:intergenic |
| TGGTTAAGAACAAAGGAATC+AGG | 0.379875 | 2_1:-26363070 | Msa0203040:CDS |
| ATGTATTAACTAATATGAAA+TGG | 0.399378 | 2_1:+26363911 | None:intergenic |
| ATATCATGTAGTTGTGAAAC+CGG | 0.408825 | 2_1:-26362088 | Msa0203040:CDS |
| AGAACCTGGAAATTCATGTT+TGG | 0.410797 | 2_1:-26363090 | Msa0203040:CDS |
| AAGGCTGGGACTTTGAGATT+AGG | 0.425248 | 2_1:-26363016 | Msa0203040:CDS |
| TTCGTCGTCGCAGACGGTGT+TGG | 0.426654 | 2_1:-26363686 | Msa0203040:CDS |
| TCGTCGTCGCAGACGGTGTT+GGG | 0.426913 | 2_1:-26363685 | Msa0203040:CDS |
| CGGTGTTGGGTGTGAGGAAA+AGG | 0.429005 | 2_1:-26363672 | Msa0203040:CDS |
| GTTGATGGTTGTGGAATTCA+TGG | 0.436790 | 2_1:-26363583 | Msa0203040:CDS |
| TTGGATTAATTAGCAATATG+TGG | 0.437205 | 2_1:+26362005 | None:intergenic |
| GTAAAGCATGCAGCTACATA+TGG | 0.441907 | 2_1:-26361878 | Msa0203040:three_prime_UTR |
| TAAAGAAGTGGAGAAATTGA+TGG | 0.444445 | 2_1:-26362124 | Msa0203040:CDS |
| ATGCTAGCTCTTCACAACTT+TGG | 0.447246 | 2_1:+26361986 | None:intergenic |
| GAAGAGTTGATTCTAAGAGA+TGG | 0.449712 | 2_1:-26363553 | Msa0203040:CDS |
| ATCAGGATTGCAATTGAGCC+AGG | 0.456564 | 2_1:-26363053 | Msa0203040:CDS |
| GGGCTGTTAGTAACAAAGGC+TGG | 0.459412 | 2_1:-26363031 | Msa0203040:CDS |
| TTTGCTTCTCATGCGTAGAA+AGG | 0.475993 | 2_1:-26363518 | Msa0203040:intron |
| CTCTAAGCATTTATAAGAAG+TGG | 0.485897 | 2_1:-26363166 | Msa0203040:CDS |
| TGAAAATGTGCAGGGAGGTA+TGG | 0.497953 | 2_1:-26363195 | Msa0203040:intron |
| GGTTATAGTGTAAACTATGA+AGG | 0.510131 | 2_1:-26363140 | Msa0203040:CDS |
| CACTGATTGTAGGACTCAAA+AGG | 0.512818 | 2_1:-26363617 | Msa0203040:CDS |
| CTATTGTTCGTCGTCGCAGA+CGG | 0.514860 | 2_1:-26363692 | Msa0203040:CDS |
| CCTTTGTTACTAACAGCCCC+TGG | 0.527858 | 2_1:+26363035 | None:intergenic |
| GGCTGTTAGTAACAAAGGCT+GGG | 0.537091 | 2_1:-26363030 | Msa0203040:CDS |
| CAATAGAGTTTACTAACGAT+TGG | 0.539463 | 2_1:+26363709 | None:intergenic |
| CGCAGACGGTGTTGGGTGTG+AGG | 0.540715 | 2_1:-26363678 | Msa0203040:CDS |
| AGCATTTATAAGAAGTGGAA+AGG | 0.545640 | 2_1:-26363161 | Msa0203040:CDS |
| TCATGTTTGGTTAAGAACAA+AGG | 0.548192 | 2_1:-26363077 | Msa0203040:CDS |
| TATCATGTAGTTGTGAAACC+GGG | 0.550855 | 2_1:-26362087 | Msa0203040:CDS |
| TAAAGCATGCAGCTACATAT+GGG | 0.562539 | 2_1:-26361877 | Msa0203040:three_prime_UTR |
| CCACATGTAGTGAGTGGTGG+TGG | 0.563567 | 2_1:-26363649 | Msa0203040:CDS |
| GTATTCAGCTTAAAAGAACC+TGG | 0.563706 | 2_1:-26363104 | Msa0203040:CDS |
| TGTAGTTGTGAAACCGGGGA+TGG | 0.571453 | 2_1:-26362082 | Msa0203040:CDS |
| CCAGGGGCTGTTAGTAACAA+AGG | 0.575524 | 2_1:-26363035 | Msa0203040:CDS |
| GGCTGGGACTTTGAGATTAG+GGG | 0.576442 | 2_1:-26363014 | Msa0203040:CDS |
| ACAAAAGCTTGATCCATCCC+CGG | 0.577739 | 2_1:+26362069 | None:intergenic |
| GGAGAAATTGATGGAAAACA+AGG | 0.580675 | 2_1:-26362115 | Msa0203040:CDS |
| TAGAGGCAACATAGTAGCAC+AGG | 0.581579 | 2_1:-26362955 | Msa0203040:intron |
| CAACTTTCAACTAAGTAACA+AGG | 0.585279 | 2_1:+26363771 | None:intergenic |
| TGCAGCATTGTTGATACTAG+AGG | 0.590465 | 2_1:-26362972 | Msa0203040:CDS |
| CAATGCTGCAATGCTTGTCA+GGG | 0.592241 | 2_1:+26362985 | None:intergenic |
| ATATGCATCAATGTGATGGT+AGG | 0.594293 | 2_1:+26361901 | None:intergenic |
| GGTTGGGATAAATAAAGAAG+TGG | 0.595544 | 2_1:-26362136 | Msa0203040:CDS |
| TCAGGATTGCAATTGAGCCA+GGG | 0.612778 | 2_1:-26363052 | Msa0203040:CDS |
| CAGGATTGCAATTGAGCCAG+GGG | 0.617829 | 2_1:-26363051 | Msa0203040:CDS |
| CCACCACCACTCACTACATG+TGG | 0.632877 | 2_1:+26363649 | None:intergenic |
| TTACATATGCATCAATGTGA+TGG | 0.645562 | 2_1:+26361897 | None:intergenic |
| TGTGCAGGGAGGTATGGTTG+AGG | 0.645663 | 2_1:-26363189 | Msa0203040:intron |
| AAAAGGCCACATGTAGTGAG+TGG | 0.660839 | 2_1:-26363655 | Msa0203040:CDS |
| TTGATGGTTGTGGAATTCAT+GGG | 0.667824 | 2_1:-26363582 | Msa0203040:CDS |
| ATCATGTAGTTGTGAAACCG+GGG | 0.679432 | 2_1:-26362086 | Msa0203040:CDS |
| AGGCCACATGTAGTGAGTGG+TGG | 0.689979 | 2_1:-26363652 | Msa0203040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTATACACATAAATATT+GGG | + | chr2_1:26362852-26362871 | None:intergenic | 10.0% |
| !! | ATTATTATACACATAAATAT+TGG | + | chr2_1:26362853-26362872 | None:intergenic | 10.0% |
| !! | TGTATATTAGTAAAAAATTA+CGG | + | chr2_1:26362941-26362960 | None:intergenic | 10.0% |
| !!! | TTTATAAGTAATTAGATTTT+TGG | - | chr2_1:26363147-26363166 | Msa0203040:CDS | 10.0% |
| !! | TTATTATACACATAAATATT+GGG | + | chr2_1:26362852-26362871 | None:intergenic | 10.0% |
| !! | ATTATTATACACATAAATAT+TGG | + | chr2_1:26362853-26362872 | None:intergenic | 10.0% |
| !! | TGTATATTAGTAAAAAATTA+CGG | + | chr2_1:26362941-26362960 | None:intergenic | 10.0% |
| !!! | TTTATAAGTAATTAGATTTT+TGG | - | chr2_1:26363147-26363166 | Msa0203040:CDS | 10.0% |
| !! | ATGTATTAACTAATATGAAA+TGG | + | chr2_1:26361871-26361890 | None:intergenic | 15.0% |
| !! | TCAACAAAAAAAATAAAACA+AGG | + | chr2_1:26361976-26361995 | None:intergenic | 15.0% |
| !!! | TTTCATTTTATATTGTGTAT+AGG | - | chr2_1:26362367-26362386 | Msa0203040:intron | 15.0% |
| !!! | AAAATTACACATTTTCAAAT+GGG | + | chr2_1:26362901-26362920 | None:intergenic | 15.0% |
| !! | ATGAAAAACCAATATAATAT+TGG | - | chr2_1:26363841-26363860 | Msa0203040:five_prime_UTR | 15.0% |
| !! | ATGTATTAACTAATATGAAA+TGG | + | chr2_1:26361871-26361890 | None:intergenic | 15.0% |
| !! | TCAACAAAAAAAATAAAACA+AGG | + | chr2_1:26361976-26361995 | None:intergenic | 15.0% |
| !!! | TTTCATTTTATATTGTGTAT+AGG | - | chr2_1:26362367-26362386 | Msa0203040:intron | 15.0% |
| !!! | AAAATTACACATTTTCAAAT+GGG | + | chr2_1:26362901-26362920 | None:intergenic | 15.0% |
| !! | ATGAAAAACCAATATAATAT+TGG | - | chr2_1:26363841-26363860 | Msa0203040:five_prime_UTR | 15.0% |
| !!! | GTTTTTATACACAAAGATTT+TGG | + | chr2_1:26361913-26361932 | None:intergenic | 20.0% |
| !! | AAAGAATCAAAAGAGATATA+AGG | + | chr2_1:26362528-26362547 | None:intergenic | 20.0% |
| !!! | CAAAATTACACATTTTCAAA+TGG | + | chr2_1:26362902-26362921 | None:intergenic | 20.0% |
| !!! | GTTAGAAATCAATTCATTTT+CGG | + | chr2_1:26363443-26363462 | None:intergenic | 20.0% |
| !!! | CTACTTTTAATTAAACTTAG+TGG | + | chr2_1:26363494-26363513 | None:intergenic | 20.0% |
| !! | AAAAGTAGAAACTCATATAT+TGG | - | chr2_1:26363506-26363525 | Msa0203040:intron | 20.0% |
| !!! | TATGTTTTATCTTGATAGAA+TGG | + | chr2_1:26363580-26363599 | None:intergenic | 20.0% |
| !! | TATTTGAGCCAATATTATAT+TGG | + | chr2_1:26363852-26363871 | None:intergenic | 20.0% |
| !!! | GTTTTTATACACAAAGATTT+TGG | + | chr2_1:26361913-26361932 | None:intergenic | 20.0% |
| !! | AAAGAATCAAAAGAGATATA+AGG | + | chr2_1:26362528-26362547 | None:intergenic | 20.0% |
| !!! | CAAAATTACACATTTTCAAA+TGG | + | chr2_1:26362902-26362921 | None:intergenic | 20.0% |
| !!! | GTTAGAAATCAATTCATTTT+CGG | + | chr2_1:26363443-26363462 | None:intergenic | 20.0% |
| !!! | CTACTTTTAATTAAACTTAG+TGG | + | chr2_1:26363494-26363513 | None:intergenic | 20.0% |
| !! | AAAAGTAGAAACTCATATAT+TGG | - | chr2_1:26363506-26363525 | Msa0203040:intron | 20.0% |
| !!! | TATGTTTTATCTTGATAGAA+TGG | + | chr2_1:26363580-26363599 | None:intergenic | 20.0% |
| !! | TATTTGAGCCAATATTATAT+TGG | + | chr2_1:26363852-26363871 | None:intergenic | 20.0% |
| ! | CTTTGTGTATAAAAACTCAT+TGG | - | chr2_1:26361917-26361936 | Msa0203040:three_prime_UTR | 25.0% |
| ! | ATGAAAACTTCAAAGTGATA+TGG | + | chr2_1:26362353-26362372 | None:intergenic | 25.0% |
| !!! | ATTTCATTTTGAAAATGTGC+AGG | - | chr2_1:26362575-26362594 | Msa0203040:intron | 25.0% |
| !!! | TTTCATTTTGAAAATGTGCA+GGG | - | chr2_1:26362576-26362595 | Msa0203040:intron | 25.0% |
| !!! | AATAATTTTTTTAGGCGAGT+TGG | - | chr2_1:26363319-26363338 | Msa0203040:intron | 25.0% |
| !!! | ATAATTTTTTTAGGCGAGTT+GGG | - | chr2_1:26363320-26363339 | Msa0203040:intron | 25.0% |
| ! | TGGAAAAAAACAACAAAAGT+TGG | + | chr2_1:26363474-26363493 | None:intergenic | 25.0% |
| ! | TAGAATGGCTTAACTATATA+TGG | + | chr2_1:26363565-26363584 | None:intergenic | 25.0% |
| !! | TTGTTGATTAATGTGTATAC+AGG | - | chr2_1:26363622-26363641 | Msa0203040:CDS | 25.0% |
| ! | TTGGATTAATTAGCAATATG+TGG | + | chr2_1:26363777-26363796 | None:intergenic | 25.0% |
| ! | CTTTGTGTATAAAAACTCAT+TGG | - | chr2_1:26361917-26361936 | Msa0203040:three_prime_UTR | 25.0% |
| ! | ATGAAAACTTCAAAGTGATA+TGG | + | chr2_1:26362353-26362372 | None:intergenic | 25.0% |
| !!! | ATTTCATTTTGAAAATGTGC+AGG | - | chr2_1:26362575-26362594 | Msa0203040:intron | 25.0% |
| !!! | TTTCATTTTGAAAATGTGCA+GGG | - | chr2_1:26362576-26362595 | Msa0203040:intron | 25.0% |
| !!! | AATAATTTTTTTAGGCGAGT+TGG | - | chr2_1:26363319-26363338 | Msa0203040:intron | 25.0% |
| !!! | ATAATTTTTTTAGGCGAGTT+GGG | - | chr2_1:26363320-26363339 | Msa0203040:intron | 25.0% |
| ! | TGGAAAAAAACAACAAAAGT+TGG | + | chr2_1:26363474-26363493 | None:intergenic | 25.0% |
| ! | TAGAATGGCTTAACTATATA+TGG | + | chr2_1:26363565-26363584 | None:intergenic | 25.0% |
| !! | TTGTTGATTAATGTGTATAC+AGG | - | chr2_1:26363622-26363641 | Msa0203040:CDS | 25.0% |
| ! | TTGGATTAATTAGCAATATG+TGG | + | chr2_1:26363777-26363796 | None:intergenic | 25.0% |
| ! | TACACAAAGATTTTGGACAA+TGG | + | chr2_1:26361906-26361925 | None:intergenic | 30.0% |
| AAAAACTCATTGGTAGACTT+TGG | - | chr2_1:26361927-26361946 | Msa0203040:three_prime_UTR | 30.0% | |
| CAACTTTCAACTAAGTAACA+AGG | + | chr2_1:26362011-26362030 | None:intergenic | 30.0% | |
| CAATAGAGTTTACTAACGAT+TGG | + | chr2_1:26362073-26362092 | None:intergenic | 30.0% | |
| ! | TATAGGTATTGTTTGTTCGA+AGG | - | chr2_1:26362384-26362403 | Msa0203040:intron | 30.0% |
| ! | ATAGGTATTGTTTGTTCGAA+GGG | - | chr2_1:26362385-26362404 | Msa0203040:intron | 30.0% |
| CTCTAAGCATTTATAAGAAG+TGG | - | chr2_1:26362613-26362632 | Msa0203040:intron | 30.0% | |
| AGCATTTATAAGAAGTGGAA+AGG | - | chr2_1:26362618-26362637 | Msa0203040:intron | 30.0% | |
| GGTTATAGTGTAAACTATGA+AGG | - | chr2_1:26362639-26362658 | Msa0203040:intron | 30.0% | |
| TTAACCAAACATGAATTTCC+AGG | + | chr2_1:26362696-26362715 | None:intergenic | 30.0% | |
| TCATGTTTGGTTAAGAACAA+AGG | - | chr2_1:26362702-26362721 | Msa0203040:intron | 30.0% | |
| AATTACGGTCAAAGTAAGTT+AGG | + | chr2_1:26362926-26362945 | None:intergenic | 30.0% | |
| ATCAACTGTGTCAAGTATTA+TGG | - | chr2_1:26363098-26363117 | Msa0203040:CDS | 30.0% | |
| TCAACTGTGTCAAGTATTAT+GGG | - | chr2_1:26363099-26363118 | Msa0203040:CDS | 30.0% | |
| ATTGAGTATCCCTACAAATA+TGG | - | chr2_1:26363182-26363201 | Msa0203040:CDS | 30.0% | |
| ACAAACGAACCATATTTGTA+GGG | + | chr2_1:26363194-26363213 | None:intergenic | 30.0% | |
| CTGATTATGAGACTAATATG+TGG | - | chr2_1:26363215-26363234 | Msa0203040:intron | 30.0% | |
| CAAAACATTGAGATATGTTC+TGG | + | chr2_1:26363364-26363383 | None:intergenic | 30.0% | |
| ! | TGAATTGATTTCTAACCAAC+TGG | - | chr2_1:26363447-26363466 | Msa0203040:intron | 30.0% |
| !!! | TGATATGCCATTTTGCAAAA+AGG | - | chr2_1:26363538-26363557 | Msa0203040:CDS | 30.0% |
| !!! | GATATGCCATTTTGCAAAAA+GGG | - | chr2_1:26363539-26363558 | Msa0203040:CDS | 30.0% |
| TGATTAATGTGTATACAGGT+TGG | - | chr2_1:26363626-26363645 | Msa0203040:CDS | 30.0% | |
| GATTAATGTGTATACAGGTT+GGG | - | chr2_1:26363627-26363646 | Msa0203040:CDS | 30.0% | |
| TAAAGAAGTGGAGAAATTGA+TGG | - | chr2_1:26363655-26363674 | Msa0203040:CDS | 30.0% | |
| ATATCATGTAGTTGTGAAAC+CGG | - | chr2_1:26363691-26363710 | Msa0203040:CDS | 30.0% | |
| !!! | ATGGATCAAGCTTTTGTTTT+TGG | - | chr2_1:26363716-26363735 | Msa0203040:CDS | 30.0% |
| TTACATATGCATCAATGTGA+TGG | + | chr2_1:26363885-26363904 | None:intergenic | 30.0% | |
| ! | TACACAAAGATTTTGGACAA+TGG | + | chr2_1:26361906-26361925 | None:intergenic | 30.0% |
| AAAAACTCATTGGTAGACTT+TGG | - | chr2_1:26361927-26361946 | Msa0203040:three_prime_UTR | 30.0% | |
| CAACTTTCAACTAAGTAACA+AGG | + | chr2_1:26362011-26362030 | None:intergenic | 30.0% | |
| CAATAGAGTTTACTAACGAT+TGG | + | chr2_1:26362073-26362092 | None:intergenic | 30.0% | |
| ! | TATAGGTATTGTTTGTTCGA+AGG | - | chr2_1:26362384-26362403 | Msa0203040:intron | 30.0% |
| ! | ATAGGTATTGTTTGTTCGAA+GGG | - | chr2_1:26362385-26362404 | Msa0203040:intron | 30.0% |
| CTCTAAGCATTTATAAGAAG+TGG | - | chr2_1:26362613-26362632 | Msa0203040:intron | 30.0% | |
| AGCATTTATAAGAAGTGGAA+AGG | - | chr2_1:26362618-26362637 | Msa0203040:intron | 30.0% | |
| GGTTATAGTGTAAACTATGA+AGG | - | chr2_1:26362639-26362658 | Msa0203040:intron | 30.0% | |
| TTAACCAAACATGAATTTCC+AGG | + | chr2_1:26362696-26362715 | None:intergenic | 30.0% | |
| TCATGTTTGGTTAAGAACAA+AGG | - | chr2_1:26362702-26362721 | Msa0203040:intron | 30.0% | |
| AATTACGGTCAAAGTAAGTT+AGG | + | chr2_1:26362926-26362945 | None:intergenic | 30.0% | |
| ATCAACTGTGTCAAGTATTA+TGG | - | chr2_1:26363098-26363117 | Msa0203040:CDS | 30.0% | |
| TCAACTGTGTCAAGTATTAT+GGG | - | chr2_1:26363099-26363118 | Msa0203040:CDS | 30.0% | |
| ATTGAGTATCCCTACAAATA+TGG | - | chr2_1:26363182-26363201 | Msa0203040:CDS | 30.0% | |
| ACAAACGAACCATATTTGTA+GGG | + | chr2_1:26363194-26363213 | None:intergenic | 30.0% | |
| CTGATTATGAGACTAATATG+TGG | - | chr2_1:26363215-26363234 | Msa0203040:intron | 30.0% | |
| CAAAACATTGAGATATGTTC+TGG | + | chr2_1:26363364-26363383 | None:intergenic | 30.0% | |
| ! | TGAATTGATTTCTAACCAAC+TGG | - | chr2_1:26363447-26363466 | Msa0203040:intron | 30.0% |
| !!! | TGATATGCCATTTTGCAAAA+AGG | - | chr2_1:26363538-26363557 | Msa0203040:CDS | 30.0% |
| !!! | GATATGCCATTTTGCAAAAA+GGG | - | chr2_1:26363539-26363558 | Msa0203040:CDS | 30.0% |
| TGATTAATGTGTATACAGGT+TGG | - | chr2_1:26363626-26363645 | Msa0203040:CDS | 30.0% | |
| GATTAATGTGTATACAGGTT+GGG | - | chr2_1:26363627-26363646 | Msa0203040:CDS | 30.0% | |
| TAAAGAAGTGGAGAAATTGA+TGG | - | chr2_1:26363655-26363674 | Msa0203040:CDS | 30.0% | |
| ATATCATGTAGTTGTGAAAC+CGG | - | chr2_1:26363691-26363710 | Msa0203040:CDS | 30.0% | |
| !!! | ATGGATCAAGCTTTTGTTTT+TGG | - | chr2_1:26363716-26363735 | Msa0203040:CDS | 30.0% |
| TTACATATGCATCAATGTGA+TGG | + | chr2_1:26363885-26363904 | None:intergenic | 30.0% | |
| ! | CAAAGATTTTGGACAATGGT+TGG | + | chr2_1:26361902-26361921 | None:intergenic | 35.0% |
| AACAAGGATTTCAAGCTTCT+TGG | + | chr2_1:26361960-26361979 | None:intergenic | 35.0% | |
| !! | GTTTTGTAGTCACTGATTGT+AGG | - | chr2_1:26362152-26362171 | Msa0203040:intron | 35.0% |
| !! | GACTCAAAAGGTTGTTTTCA+AGG | - | chr2_1:26362174-26362193 | Msa0203040:intron | 35.0% |
| !! | AAGGTTGTTTTCAAGGTTGA+TGG | - | chr2_1:26362181-26362200 | Msa0203040:intron | 35.0% |
| ! | TTGATGGTTGTGGAATTCAT+GGG | - | chr2_1:26362197-26362216 | Msa0203040:intron | 35.0% |
| ! | GAAGAGTTGATTCTAAGAGA+TGG | - | chr2_1:26362226-26362245 | Msa0203040:intron | 35.0% |
| GTATTCAGCTTAAAAGAACC+TGG | - | chr2_1:26362675-26362694 | Msa0203040:intron | 35.0% | |
| AGAACCTGGAAATTCATGTT+TGG | - | chr2_1:26362689-26362708 | Msa0203040:intron | 35.0% | |
| TGGTTAAGAACAAAGGAATC+AGG | - | chr2_1:26362709-26362728 | Msa0203040:intron | 35.0% | |
| CACAAACGAACCATATTTGT+AGG | + | chr2_1:26363195-26363214 | None:intergenic | 35.0% | |
| ! | ATAAAGACTTGTTCGTGCTT+TGG | + | chr2_1:26363259-26363278 | None:intergenic | 35.0% |
| !! | TTTTGAGAGTTCAACTAACC+AGG | - | chr2_1:26363379-26363398 | Msa0203040:intron | 35.0% |
| ! | AACTAACCAGGTTCTAATGT+TGG | - | chr2_1:26363391-26363410 | Msa0203040:intron | 35.0% |
| ! | ATATGGCCCTTTTTGCAAAA+TGG | + | chr2_1:26363548-26363567 | None:intergenic | 35.0% |
| GGTTGGGATAAATAAAGAAG+TGG | - | chr2_1:26363643-26363662 | Msa0203040:CDS | 35.0% | |
| GGAGAAATTGATGGAAAACA+AGG | - | chr2_1:26363664-26363683 | Msa0203040:CDS | 35.0% | |
| TATCATGTAGTTGTGAAACC+GGG | - | chr2_1:26363692-26363711 | Msa0203040:CDS | 35.0% | |
| GCTACACTTGACTACATTTA+TGG | - | chr2_1:26363746-26363765 | Msa0203040:exon | 35.0% | |
| ATATGCATCAATGTGATGGT+AGG | + | chr2_1:26363881-26363900 | None:intergenic | 35.0% | |
| TAAAGCATGCAGCTACATAT+GGG | - | chr2_1:26363902-26363921 | Msa0203040:five_prime_UTR | 35.0% | |
| ! | CAAAGATTTTGGACAATGGT+TGG | + | chr2_1:26361902-26361921 | None:intergenic | 35.0% |
| AACAAGGATTTCAAGCTTCT+TGG | + | chr2_1:26361960-26361979 | None:intergenic | 35.0% | |
| !! | GTTTTGTAGTCACTGATTGT+AGG | - | chr2_1:26362152-26362171 | Msa0203040:intron | 35.0% |
| !! | GACTCAAAAGGTTGTTTTCA+AGG | - | chr2_1:26362174-26362193 | Msa0203040:intron | 35.0% |
| !! | AAGGTTGTTTTCAAGGTTGA+TGG | - | chr2_1:26362181-26362200 | Msa0203040:intron | 35.0% |
| ! | TTGATGGTTGTGGAATTCAT+GGG | - | chr2_1:26362197-26362216 | Msa0203040:intron | 35.0% |
| ! | GAAGAGTTGATTCTAAGAGA+TGG | - | chr2_1:26362226-26362245 | Msa0203040:intron | 35.0% |
| GTATTCAGCTTAAAAGAACC+TGG | - | chr2_1:26362675-26362694 | Msa0203040:intron | 35.0% | |
| AGAACCTGGAAATTCATGTT+TGG | - | chr2_1:26362689-26362708 | Msa0203040:intron | 35.0% | |
| TGGTTAAGAACAAAGGAATC+AGG | - | chr2_1:26362709-26362728 | Msa0203040:intron | 35.0% | |
| CACAAACGAACCATATTTGT+AGG | + | chr2_1:26363195-26363214 | None:intergenic | 35.0% | |
| ! | ATAAAGACTTGTTCGTGCTT+TGG | + | chr2_1:26363259-26363278 | None:intergenic | 35.0% |
| !! | TTTTGAGAGTTCAACTAACC+AGG | - | chr2_1:26363379-26363398 | Msa0203040:intron | 35.0% |
| ! | AACTAACCAGGTTCTAATGT+TGG | - | chr2_1:26363391-26363410 | Msa0203040:intron | 35.0% |
| ! | ATATGGCCCTTTTTGCAAAA+TGG | + | chr2_1:26363548-26363567 | None:intergenic | 35.0% |
| GGTTGGGATAAATAAAGAAG+TGG | - | chr2_1:26363643-26363662 | Msa0203040:CDS | 35.0% | |
| GGAGAAATTGATGGAAAACA+AGG | - | chr2_1:26363664-26363683 | Msa0203040:CDS | 35.0% | |
| TATCATGTAGTTGTGAAACC+GGG | - | chr2_1:26363692-26363711 | Msa0203040:CDS | 35.0% | |
| GCTACACTTGACTACATTTA+TGG | - | chr2_1:26363746-26363765 | Msa0203040:exon | 35.0% | |
| ATATGCATCAATGTGATGGT+AGG | + | chr2_1:26363881-26363900 | None:intergenic | 35.0% | |
| TAAAGCATGCAGCTACATAT+GGG | - | chr2_1:26363902-26363921 | Msa0203040:five_prime_UTR | 35.0% | |
| ! | CACTGATTGTAGGACTCAAA+AGG | - | chr2_1:26362162-26362181 | Msa0203040:intron | 40.0% |
| !!! | GTTTTCAAGGTTGATGGTTG+TGG | - | chr2_1:26362187-26362206 | Msa0203040:intron | 40.0% |
| !! | GTTGATGGTTGTGGAATTCA+TGG | - | chr2_1:26362196-26362215 | Msa0203040:intron | 40.0% |
| TTTGCTTCTCATGCGTAGAA+AGG | - | chr2_1:26362261-26362280 | Msa0203040:intron | 40.0% | |
| !! | CATTTTGAAAATGTGCAGGG+AGG | - | chr2_1:26362579-26362598 | Msa0203040:intron | 40.0% |
| TGCAGCATTGTTGATACTAG+AGG | - | chr2_1:26362807-26362826 | Msa0203040:intron | 40.0% | |
| TTCAAATGGGTCATCTATCG+CGG | + | chr2_1:26362888-26362907 | None:intergenic | 40.0% | |
| CTGTGTCAAGTATTATGGGA+CGG | - | chr2_1:26363103-26363122 | Msa0203040:CDS | 40.0% | |
| TGAGACTAATATGTGGTCGA+CGG | - | chr2_1:26363222-26363241 | Msa0203040:intron | 40.0% | |
| !! | CAGGTTCTAATGTTGGTAGT+GGG | - | chr2_1:26363398-26363417 | Msa0203040:intron | 40.0% |
| ! | ACAACAAAAGTTGGTCCAGT+TGG | + | chr2_1:26363465-26363484 | None:intergenic | 40.0% |
| ATCATGTAGTTGTGAAACCG+GGG | - | chr2_1:26363693-26363712 | Msa0203040:CDS | 40.0% | |
| ! | ATGCTAGCTCTTCACAACTT+TGG | + | chr2_1:26363796-26363815 | None:intergenic | 40.0% |
| GTAAAGCATGCAGCTACATA+TGG | - | chr2_1:26363901-26363920 | Msa0203040:five_prime_UTR | 40.0% | |
| ! | CACTGATTGTAGGACTCAAA+AGG | - | chr2_1:26362162-26362181 | Msa0203040:intron | 40.0% |
| !!! | GTTTTCAAGGTTGATGGTTG+TGG | - | chr2_1:26362187-26362206 | Msa0203040:intron | 40.0% |
| !! | GTTGATGGTTGTGGAATTCA+TGG | - | chr2_1:26362196-26362215 | Msa0203040:intron | 40.0% |
| TTTGCTTCTCATGCGTAGAA+AGG | - | chr2_1:26362261-26362280 | Msa0203040:intron | 40.0% | |
| !! | CATTTTGAAAATGTGCAGGG+AGG | - | chr2_1:26362579-26362598 | Msa0203040:intron | 40.0% |
| TGCAGCATTGTTGATACTAG+AGG | - | chr2_1:26362807-26362826 | Msa0203040:intron | 40.0% | |
| TTCAAATGGGTCATCTATCG+CGG | + | chr2_1:26362888-26362907 | None:intergenic | 40.0% | |
| CTGTGTCAAGTATTATGGGA+CGG | - | chr2_1:26363103-26363122 | Msa0203040:CDS | 40.0% | |
| TGAGACTAATATGTGGTCGA+CGG | - | chr2_1:26363222-26363241 | Msa0203040:intron | 40.0% | |
| !! | CAGGTTCTAATGTTGGTAGT+GGG | - | chr2_1:26363398-26363417 | Msa0203040:intron | 40.0% |
| ! | ACAACAAAAGTTGGTCCAGT+TGG | + | chr2_1:26363465-26363484 | None:intergenic | 40.0% |
| ATCATGTAGTTGTGAAACCG+GGG | - | chr2_1:26363693-26363712 | Msa0203040:CDS | 40.0% | |
| ! | ATGCTAGCTCTTCACAACTT+TGG | + | chr2_1:26363796-26363815 | None:intergenic | 40.0% |
| GTAAAGCATGCAGCTACATA+TGG | - | chr2_1:26363901-26363920 | Msa0203040:five_prime_UTR | 40.0% | |
| AAAAGGCCACATGTAGTGAG+TGG | - | chr2_1:26362124-26362143 | Msa0203040:CDS | 45.0% | |
| TGAAAATGTGCAGGGAGGTA+TGG | - | chr2_1:26362584-26362603 | Msa0203040:intron | 45.0% | |
| ATCAGGATTGCAATTGAGCC+AGG | - | chr2_1:26362726-26362745 | Msa0203040:intron | 45.0% | |
| TCAGGATTGCAATTGAGCCA+GGG | - | chr2_1:26362727-26362746 | Msa0203040:intron | 45.0% | |
| GGCTGTTAGTAACAAAGGCT+GGG | - | chr2_1:26362749-26362768 | Msa0203040:intron | 45.0% | |
| !! | AAGGCTGGGACTTTGAGATT+AGG | - | chr2_1:26362763-26362782 | Msa0203040:intron | 45.0% |
| !! | AGGCTGGGACTTTGAGATTA+GGG | - | chr2_1:26362764-26362783 | Msa0203040:intron | 45.0% |
| CAATGCTGCAATGCTTGTCA+GGG | + | chr2_1:26362797-26362816 | None:intergenic | 45.0% | |
| ACAATGCTGCAATGCTTGTC+AGG | + | chr2_1:26362798-26362817 | None:intergenic | 45.0% | |
| TAGAGGCAACATAGTAGCAC+AGG | - | chr2_1:26362824-26362843 | Msa0203040:intron | 45.0% | |
| TCAAATGGGTCATCTATCGC+GGG | + | chr2_1:26362887-26362906 | None:intergenic | 45.0% | |
| TGTCAAGTATTATGGGACGG+AGG | - | chr2_1:26363106-26363125 | Msa0203040:CDS | 45.0% | |
| GTCAAGTATTATGGGACGGA+GGG | - | chr2_1:26363107-26363126 | Msa0203040:CDS | 45.0% | |
| TTGTTCGTGCTTTGGTTAGG+AGG | + | chr2_1:26363251-26363270 | None:intergenic | 45.0% | |
| ! | GACTTGTTCGTGCTTTGGTT+AGG | + | chr2_1:26363254-26363273 | None:intergenic | 45.0% |
| CCACTACCAACATTAGAACC+TGG | + | chr2_1:26363400-26363419 | None:intergenic | 45.0% | |
| ! | CCAGGTTCTAATGTTGGTAG+TGG | - | chr2_1:26363397-26363416 | Msa0203040:intron | 45.0% |
| ACAAAAGCTTGATCCATCCC+CGG | + | chr2_1:26363713-26363732 | None:intergenic | 45.0% | |
| AAAAGGCCACATGTAGTGAG+TGG | - | chr2_1:26362124-26362143 | Msa0203040:CDS | 45.0% | |
| TGAAAATGTGCAGGGAGGTA+TGG | - | chr2_1:26362584-26362603 | Msa0203040:intron | 45.0% | |
| ATCAGGATTGCAATTGAGCC+AGG | - | chr2_1:26362726-26362745 | Msa0203040:intron | 45.0% | |
| TCAGGATTGCAATTGAGCCA+GGG | - | chr2_1:26362727-26362746 | Msa0203040:intron | 45.0% | |
| GGCTGTTAGTAACAAAGGCT+GGG | - | chr2_1:26362749-26362768 | Msa0203040:intron | 45.0% | |
| !! | AAGGCTGGGACTTTGAGATT+AGG | - | chr2_1:26362763-26362782 | Msa0203040:intron | 45.0% |
| !! | AGGCTGGGACTTTGAGATTA+GGG | - | chr2_1:26362764-26362783 | Msa0203040:intron | 45.0% |
| CAATGCTGCAATGCTTGTCA+GGG | + | chr2_1:26362797-26362816 | None:intergenic | 45.0% | |
| ACAATGCTGCAATGCTTGTC+AGG | + | chr2_1:26362798-26362817 | None:intergenic | 45.0% | |
| TAGAGGCAACATAGTAGCAC+AGG | - | chr2_1:26362824-26362843 | Msa0203040:intron | 45.0% | |
| TCAAATGGGTCATCTATCGC+GGG | + | chr2_1:26362887-26362906 | None:intergenic | 45.0% | |
| TGTCAAGTATTATGGGACGG+AGG | - | chr2_1:26363106-26363125 | Msa0203040:CDS | 45.0% | |
| GTCAAGTATTATGGGACGGA+GGG | - | chr2_1:26363107-26363126 | Msa0203040:CDS | 45.0% | |
| TTGTTCGTGCTTTGGTTAGG+AGG | + | chr2_1:26363251-26363270 | None:intergenic | 45.0% | |
| ! | GACTTGTTCGTGCTTTGGTT+AGG | + | chr2_1:26363254-26363273 | None:intergenic | 45.0% |
| CCACTACCAACATTAGAACC+TGG | + | chr2_1:26363400-26363419 | None:intergenic | 45.0% | |
| ! | CCAGGTTCTAATGTTGGTAG+TGG | - | chr2_1:26363397-26363416 | Msa0203040:intron | 45.0% |
| ACAAAAGCTTGATCCATCCC+CGG | + | chr2_1:26363713-26363732 | None:intergenic | 45.0% | |
| !!! | ATTTTGATAATAATTTTTTT+AGG | - | chr2_1:26363311-26363330 | Msa0203040:intron | 5.0% |
| !!! | ATTTTGATAATAATTTTTTT+AGG | - | chr2_1:26363311-26363330 | Msa0203040:intron | 5.0% |
| CTATTGTTCGTCGTCGCAGA+CGG | - | chr2_1:26362087-26362106 | Msa0203040:CDS | 50.0% | |
| CAGGATTGCAATTGAGCCAG+GGG | - | chr2_1:26362728-26362747 | Msa0203040:intron | 50.0% | |
| CCTTTGTTACTAACAGCCCC+TGG | + | chr2_1:26362747-26362766 | None:intergenic | 50.0% | |
| CCAGGGGCTGTTAGTAACAA+AGG | - | chr2_1:26362744-26362763 | Msa0203040:intron | 50.0% | |
| GGGCTGTTAGTAACAAAGGC+TGG | - | chr2_1:26362748-26362767 | Msa0203040:intron | 50.0% | |
| !! | GGCTGGGACTTTGAGATTAG+GGG | - | chr2_1:26362765-26362784 | Msa0203040:intron | 50.0% |
| ! | TTTAGGCGAGTTGGGTCTTG+AGG | - | chr2_1:26363328-26363347 | Msa0203040:intron | 50.0% |
| TGTAGTTGTGAAACCGGGGA+TGG | - | chr2_1:26363697-26363716 | Msa0203040:CDS | 50.0% | |
| CTATTGTTCGTCGTCGCAGA+CGG | - | chr2_1:26362087-26362106 | Msa0203040:CDS | 50.0% | |
| CAGGATTGCAATTGAGCCAG+GGG | - | chr2_1:26362728-26362747 | Msa0203040:intron | 50.0% | |
| CCTTTGTTACTAACAGCCCC+TGG | + | chr2_1:26362747-26362766 | None:intergenic | 50.0% | |
| CCAGGGGCTGTTAGTAACAA+AGG | - | chr2_1:26362744-26362763 | Msa0203040:intron | 50.0% | |
| GGGCTGTTAGTAACAAAGGC+TGG | - | chr2_1:26362748-26362767 | Msa0203040:intron | 50.0% | |
| !! | GGCTGGGACTTTGAGATTAG+GGG | - | chr2_1:26362765-26362784 | Msa0203040:intron | 50.0% |
| ! | TTTAGGCGAGTTGGGTCTTG+AGG | - | chr2_1:26363328-26363347 | Msa0203040:intron | 50.0% |
| TGTAGTTGTGAAACCGGGGA+TGG | - | chr2_1:26363697-26363716 | Msa0203040:CDS | 50.0% | |
| ! | CGGTGTTGGGTGTGAGGAAA+AGG | - | chr2_1:26362107-26362126 | Msa0203040:CDS | 55.0% |
| AGGCCACATGTAGTGAGTGG+TGG | - | chr2_1:26362127-26362146 | Msa0203040:CDS | 55.0% | |
| CCACCACCACTCACTACATG+TGG | + | chr2_1:26362133-26362152 | None:intergenic | 55.0% | |
| CCACATGTAGTGAGTGGTGG+TGG | - | chr2_1:26362130-26362149 | Msa0203040:CDS | 55.0% | |
| ! | TGTGCAGGGAGGTATGGTTG+AGG | - | chr2_1:26362590-26362609 | Msa0203040:intron | 55.0% |
| GTCATCTATCGCGGGAAGGA+GGG | + | chr2_1:26362879-26362898 | None:intergenic | 55.0% | |
| ATGGGTCATCTATCGCGGGA+AGG | + | chr2_1:26362883-26362902 | None:intergenic | 55.0% | |
| ! | CGGTGTTGGGTGTGAGGAAA+AGG | - | chr2_1:26362107-26362126 | Msa0203040:CDS | 55.0% |
| AGGCCACATGTAGTGAGTGG+TGG | - | chr2_1:26362127-26362146 | Msa0203040:CDS | 55.0% | |
| CCACCACCACTCACTACATG+TGG | + | chr2_1:26362133-26362152 | None:intergenic | 55.0% | |
| CCACATGTAGTGAGTGGTGG+TGG | - | chr2_1:26362130-26362149 | Msa0203040:CDS | 55.0% | |
| ! | TGTGCAGGGAGGTATGGTTG+AGG | - | chr2_1:26362590-26362609 | Msa0203040:intron | 55.0% |
| GTCATCTATCGCGGGAAGGA+GGG | + | chr2_1:26362879-26362898 | None:intergenic | 55.0% | |
| ATGGGTCATCTATCGCGGGA+AGG | + | chr2_1:26362883-26362902 | None:intergenic | 55.0% | |
| TTCGTCGTCGCAGACGGTGT+TGG | - | chr2_1:26362093-26362112 | Msa0203040:CDS | 60.0% | |
| TCGTCGTCGCAGACGGTGTT+GGG | - | chr2_1:26362094-26362113 | Msa0203040:CDS | 60.0% | |
| GGTCATCTATCGCGGGAAGG+AGG | + | chr2_1:26362880-26362899 | None:intergenic | 60.0% | |
| TTCGTCGTCGCAGACGGTGT+TGG | - | chr2_1:26362093-26362112 | Msa0203040:CDS | 60.0% | |
| TCGTCGTCGCAGACGGTGTT+GGG | - | chr2_1:26362094-26362113 | Msa0203040:CDS | 60.0% | |
| GGTCATCTATCGCGGGAAGG+AGG | + | chr2_1:26362880-26362899 | None:intergenic | 60.0% | |
| ! | CGCAGACGGTGTTGGGTGTG+AGG | - | chr2_1:26362101-26362120 | Msa0203040:CDS | 65.0% |
| ! | CGCAGACGGTGTTGGGTGTG+AGG | - | chr2_1:26362101-26362120 | Msa0203040:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 26361863 | 26363938 | 26361863 | ID=Msa0203040;Name=Msa0203040 |
| chr2_1 | mRNA | 26361863 | 26363938 | 26361863 | ID=Msa0203040-mRNA-1;Parent=Msa0203040;Name=Msa0203040-mRNA-1;_AED=0.00;_eAED=0.00;_QI=192|1|1|1|1|1|3|151|206 |
| chr2_1 | exon | 26361863 | 26362157 | 26361863 | ID=Msa0203040-mRNA-1:exon:9870;Parent=Msa0203040-mRNA-1 |
| chr2_1 | exon | 26362956 | 26363204 | 26362956 | ID=Msa0203040-mRNA-1:exon:9869;Parent=Msa0203040-mRNA-1 |
| chr2_1 | exon | 26363519 | 26363938 | 26363519 | ID=Msa0203040-mRNA-1:exon:9868;Parent=Msa0203040-mRNA-1 |
| chr2_1 | five_prime_UTR | 26363747 | 26363938 | 26363747 | ID=Msa0203040-mRNA-1:five_prime_utr;Parent=Msa0203040-mRNA-1 |
| chr2_1 | CDS | 26363519 | 26363746 | 26363519 | ID=Msa0203040-mRNA-1:cds;Parent=Msa0203040-mRNA-1 |
| chr2_1 | CDS | 26362956 | 26363204 | 26362956 | ID=Msa0203040-mRNA-1:cds;Parent=Msa0203040-mRNA-1 |
| chr2_1 | CDS | 26362014 | 26362157 | 26362014 | ID=Msa0203040-mRNA-1:cds;Parent=Msa0203040-mRNA-1 |
| chr2_1 | three_prime_UTR | 26361863 | 26362013 | 26361863 | ID=Msa0203040-mRNA-1:three_prime_utr;Parent=Msa0203040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
