AlfalfaGEDB | Msa0341780

M. sativa cultivar zhongmu-4 / Msa0341780

KEGG: K10656
GO: GO:0000209 GO:0000323 GO:0002376 GO:0002495 GO:0002504 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005768 GO:0005773 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010556 GO:0010558 GO:0010605 GO:0012505 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019882 GO:0031410 GO:0031982 GO:0032446 GO:0036211 GO:0042287 GO:0042289 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045346 GO:0045347 GO:0048002 GO:0048519 GO:0050789 GO:0060255 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0097708 GO:0140096 GO:1901564
PFAM: PF12906.10

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0341780	XP_013465659.1	94.309	246	11	2	1	243	1	246	1.04e-161	457

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0044000	Msa0341780	-0.804239	2.376430e-49	-8.615850e-47
Msa0056470	Msa0341780	-0.814816	1.270765e-51	-8.615850e-47
Msa0059040	Msa0341780	-0.813486	2.498432e-51	-8.615850e-47
Msa0059110	Msa0341780	-0.806262	8.961418e-50	-8.615850e-47
Msa0072420	Msa0341780	-0.829380	5.316976e-55	-8.615850e-47
Msa0090360	Msa0341780	-0.814233	1.710349e-51	-8.615850e-47
Msa0101500	Msa0341780	0.801501	8.741197e-49	-8.615850e-47
Msa0137840	Msa0341780	-0.801617	8.275905e-49	-8.615850e-47
Msa0140820	Msa0341780	-0.827638	1.401052e-54	-8.615850e-47
Msa0150300	Msa0341780	-0.825554	4.400411e-54	-8.615850e-47
Msa0184040	Msa0341780	-0.813769	2.164251e-51	-8.615850e-47
Msa0189320	Msa0341780	-0.807739	4.363297e-50	-8.615850e-47
Msa0194950	Msa0341780	0.817289	3.561768e-52	-8.615850e-47
Msa0272300	Msa0341780	-0.805651	1.204553e-49	-8.615850e-47
Msa0315440	Msa0341780	0.826412	2.752398e-54	-8.615850e-47
Msa0341780	Msa0366890	-0.824801	6.630117e-54	-8.615850e-47
Msa0341780	Msa0369450	-0.806514	7.927522e-50	-8.615850e-47
Msa0341780	Msa0398670	-0.804478	2.118955e-49	-8.615850e-47
Msa0341780	Msa0521050	-0.819742	9.900550e-53	-8.615850e-47
Msa0341780	Msa0548240	-0.824782	6.698473e-54	-8.615850e-47
Msa0341780	Msa0556060	-0.816089	6.618337e-52	-8.615850e-47
Msa0341780	Msa0581110	-0.826932	2.068136e-54	-8.615850e-47
Msa0341780	Msa0581280	-0.812031	5.201661e-51	-8.615850e-47
Msa0341780	Msa0623790	-0.809561	1.780401e-50	-8.615850e-47
Msa0341780	Msa0643560	-0.800823	1.202595e-48	-8.615850e-47
Msa0341780	Msa0647500	-0.832580	8.718255e-56	-8.615850e-47
Msa0341780	Msa0661300	-0.809525	1.812495e-50	-8.615850e-47
Msa0341780	Msa0709400	-0.808445	3.085809e-50	-8.615850e-47
Msa0341780	Msa1081360	0.803877	2.825894e-49	-8.615850e-47
Msa0341780	Msa1081930	-0.811377	7.216185e-51	-8.615850e-47
Msa0341780	Msa1126830	-0.823413	1.404013e-53	-8.615850e-47
Msa0341780	Msa1133170	0.968469	1.011145e-128	-8.615850e-47
Msa0341780	Msa1160590	-0.805378	1.373842e-49	-8.615850e-47
Msa0341780	Msa1165940	-0.856533	3.017501e-62	-8.615850e-47
Msa0341780	Msa1209200	-0.827043	1.945343e-54	-8.615850e-47
Msa0341780	Msa1243740	0.802846	4.621992e-49	-8.615850e-47
Msa0341780	Msa1254730	-0.802371	5.790414e-49	-8.615850e-47
Msa0341780	Msa1294820	-0.809344	1.981695e-50	-8.615850e-47
Msa0341780	Msa1305660	-0.800897	1.161449e-48	-8.615850e-47
Msa0341780	Msa1341060	-0.810369	1.193102e-50	-8.615850e-47
Msa0341780	Msa1402420	0.820259	7.539891e-53	-8.615850e-47
Msa0341780	Msa1419870	-0.800210	1.604092e-48	-8.615850e-47
Msa0341780	Msa1428880	-0.804619	1.980747e-49	-8.615850e-47
Msa0341780	Msa1432420	-0.814786	1.289935e-51	-8.615850e-47
Msa0341780	Msa1433390	-0.819233	1.293509e-52	-8.615850e-47
Msa0341780	Msa1434420	0.845688	3.475364e-59	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0341780	MtrunA17_Chr2g0334241	94.309	246	11	2	1	243	1	246	9.53e-166	457
Msa0341780	MtrunA17_Chr4g0063131	29.900	301	136	8	13	242	15	311	1.47e-38	136
Msa0341780	MtrunA17_Chr3g0124551	47.222	144	73	1	51	191	31	174	1.51e-36	131
Msa0341780	MtrunA17_Chr3g0124551	42.500	80	38	2	171	242	245	324	4.01e-11	62.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0341780	AT1G50440.3	69.444	252	66	3	1	243	1	250	1.64e-128	363
Msa0341780	AT1G50440.1	69.444	252	66	3	1	243	1	250	1.64e-128	363
Msa0341780	AT1G50440.2	69.444	252	66	3	1	243	1	250	1.64e-128	363
Msa0341780	AT1G50440.4	68.919	222	59	2	1	213	1	221	1.11e-112	322
Msa0341780	AT1G50440.5	58.294	211	76	3	1	202	1	208	1.93e-84	251
Msa0341780	AT1G11020.1	37.319	276	95	7	38	242	52	320	2.83e-46	157
Msa0341780	AT2G22120.1	43.421	152	79	2	24	172	7	154	1.04e-36	132
Msa0341780	AT2G22120.1	46.269	67	31	1	181	242	257	323	9.54e-11	61.2
Msa0341780	AT2G22120.2	43.421	152	79	2	24	172	7	154	1.24e-36	132
Msa0341780	AT2G22120.2	42.683	82	40	2	168	242	242	323	9.82e-11	61.2

Find 108 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCTTTCTTGTTTAAGTTTC+CGG	0.107423	2_4:-63665046	Msa0341780:three_prime_UTR
TGCAGTTCTCGCCATTATTT+TGG	0.183622	2_4:-63665596	Msa0341780:intron
TTTGAAGCTAATTGCATTTC+GGG	0.211233	2_4:+63666295	None:intergenic
GATTTGATTTGATTGATTTC+AGG	0.231650	2_4:+63666533	None:intergenic
TAATTATAGATATCATTTAA+TGG	0.232203	2_4:+63664952	None:intergenic
TGCACAGGTTGTTGCTTTCT+TGG	0.234683	2_4:-63665785	Msa0341780:intron
TTCACAGAGGTGATTCAATA+TGG	0.242810	2_4:+63666234	None:intergenic
ATGATCTGTGGACATACTTT+TGG	0.267771	2_4:+63666062	None:intergenic
CTCAACCACCATCGATCTTT+AGG	0.272819	2_4:+63665950	None:intergenic
TGCCCTGCCCTGCCCTGCCC+TGG	0.279131	2_4:+63666484	None:intergenic
GTGCTTATTTATAAATTCTA+TGG	0.292569	2_4:-63665760	Msa0341780:CDS
CATATCCATAAAAGGATAAT+AGG	0.302313	2_4:+63664798	None:intergenic
GTTTGAAGCTAATTGCATTT+CGG	0.304724	2_4:+63666294	None:intergenic
AATAAGTCCATATCCATAAA+AGG	0.312092	2_4:+63664790	None:intergenic
ACTAGGTGGGGTATGCTAAA+TGG	0.312901	2_4:+63664876	None:intergenic
TTGTCAGACGTGGCAGAAAT+AGG	0.331431	2_4:+63666205	None:intergenic
TTGGGTACCTTTGCAATGGC+AGG	0.331526	2_4:+63666081	None:intergenic
GACCTTTGTCAATTCTTGTT+TGG	0.347635	2_4:+63665498	None:intergenic
ACAGATCATGTCTCGATAAC+TGG	0.347729	2_4:-63666048	Msa0341780:CDS
GCACAGGTTGTTGCTTTCTT+GGG	0.351526	2_4:-63665784	Msa0341780:intron
AGGGCAGGGCAGGGCAGGGC+AGG	0.358239	2_4:-63666482	Msa0341780:intron
CATCCAGGGCAGGGCAGGGC+AGG	0.359157	2_4:-63666487	Msa0341780:five_prime_UTR
CAAACAAAATTATTCTCAAT+TGG	0.362581	2_4:+63666615	None:intergenic
GAGAATGAATGAATGAATCT+AGG	0.364987	2_4:+63666555	None:intergenic
CATCGATCTTTAGGGACATT+TGG	0.365167	2_4:+63665959	None:intergenic
CCTTAGTTCTGTCACATGGC+TGG	0.365929	2_4:+63665106	None:intergenic
TATTTATAGCAATGCATAGA+AGG	0.375167	2_4:-63664771	Msa0341780:three_prime_UTR
TCAACCACCATCGATCTTTA+GGG	0.389036	2_4:+63665951	None:intergenic
TTCTTCTCTCATCATCATCC+AGG	0.397339	2_4:-63666502	Msa0341780:five_prime_UTR
CTTAGTTCTGTCACATGGCT+GGG	0.400790	2_4:+63665107	None:intergenic
TTTCTGAAGAAGAAGAATCT+TGG	0.402422	2_4:+63666263	None:intergenic
ATCATCATCCAGGGCAGGGC+AGG	0.405854	2_4:-63666492	Msa0341780:five_prime_UTR
GAGCAAACCCACCAAAATAA+TGG	0.405865	2_4:+63665585	None:intergenic
TTCTTTATAGCAATAATATG+TGG	0.428860	2_4:-63665556	Msa0341780:CDS
TGCCGGATATGCCTTGATCT+TGG	0.432553	2_4:-63666124	Msa0341780:CDS
GATGAACTTAGAGAAATGTT+TGG	0.432617	2_4:-63665736	Msa0341780:CDS
ACATGGCTGGGGTCGAGTTC+AGG	0.434273	2_4:+63665119	None:intergenic
CTCTCATCATCATCCAGGGC+AGG	0.438484	2_4:-63666497	Msa0341780:five_prime_UTR
GAAACTTAAACAAGAAAGAA+TGG	0.438656	2_4:+63665049	None:intergenic
AGGCAGACCAACGAAAATAT+AGG	0.448133	2_4:-63664980	Msa0341780:three_prime_UTR
GAGGTGATTCAATATGGGTT+GGG	0.457987	2_4:+63666240	None:intergenic
CTCCAAGATCAAGGCATATC+CGG	0.463345	2_4:+63666122	None:intergenic
GGGTACCTTTGCAATGGCAG+GGG	0.470794	2_4:+63666083	None:intergenic
ATTTCGGGAAATGTATAAGT+TGG	0.473093	2_4:+63666310	None:intergenic
TCACAGAGGTGATTCAATAT+GGG	0.474068	2_4:+63666235	None:intergenic
AATAGAGGGACGGACGTTGT+TGG	0.475140	2_4:+63666685	None:intergenic
TAGAAACATTCTAAAGAGAA+AGG	0.491026	2_4:-63665000	Msa0341780:three_prime_UTR
GTGACAGAACTAAGGATGTT+GGG	0.491109	2_4:-63665098	Msa0341780:CDS
GATGTTGGGCCTTTACTAGC+TGG	0.491352	2_4:-63665084	Msa0341780:exon
TGGGTACCTTTGCAATGGCA+GGG	0.492265	2_4:+63666082	None:intergenic
GAAAATGAATGCATGATCTC+TGG	0.494455	2_4:+63665904	None:intergenic
TTAGATTGAAAATTGGTAAG+TGG	0.497882	2_4:-63666659	Msa0341780:five_prime_UTR
CGGATATGCCTTGATCTTGG+AGG	0.499840	2_4:-63666121	Msa0341780:CDS
TAGATTGAAAATTGGTAAGT+GGG	0.500296	2_4:-63666658	Msa0341780:five_prime_UTR
AACATCTAAAAGTGGAAGAC+CGG	0.504781	2_4:+63665027	None:intergenic
AGAGGTGATTCAATATGGGT+TGG	0.514100	2_4:+63666239	None:intergenic
AAACTTAAACAAGAAAGAAT+GGG	0.516980	2_4:+63665050	None:intergenic
GTTATTTGATGAAGAAGCAT+GGG	0.518465	2_4:+63664685	None:intergenic
ATTCTCAATTGGACGACGGA+CGG	0.519804	2_4:+63666626	None:intergenic
AAATGATATCTATAATTAAG+TGG	0.521584	2_4:-63664947	Msa0341780:three_prime_UTR
AGAATGAATGAATGAATCTA+GGG	0.522862	2_4:+63666556	None:intergenic
CAAGGCATATCCGGCATTGT+GGG	0.523063	2_4:+63666131	None:intergenic
TGTGACAGAACTAAGGATGT+TGG	0.527888	2_4:-63665099	Msa0341780:CDS
AGTCTTCTCCTCCAAGATCA+AGG	0.530295	2_4:+63666113	None:intergenic
TCTAATTTAACATCTAAAAG+TGG	0.531101	2_4:+63665019	None:intergenic
GGGCAGGGCAGGGCAGGGCA+GGG	0.531187	2_4:-63666481	Msa0341780:intron
TCTTTATAGCAATAATATGT+GGG	0.533500	2_4:-63665555	Msa0341780:CDS
TTGGACGACGGACGGACGGA+CGG	0.534755	2_4:+63666634	None:intergenic
AGAAGAAGAATCTTGGTTGT+CGG	0.545346	2_4:+63666270	None:intergenic
TCTTCTCTCATCATCATCCA+GGG	0.546556	2_4:-63666501	Msa0341780:five_prime_UTR
AGTTATTTGATGAAGAAGCA+TGG	0.546705	2_4:+63664684	None:intergenic
TTAGTTCTGTCACATGGCTG+GGG	0.552531	2_4:+63665108	None:intergenic
ATGCTGATCACCCACAATGC+CGG	0.553024	2_4:-63666141	Msa0341780:CDS
TGTTTGTCCTAGTTACCCGA+GGG	0.554121	2_4:-63666731	Msa0341780:five_prime_UTR
GTTTGGCAAGAACATGGTAG+TGG	0.554746	2_4:+63665515	None:intergenic
CCAGCCATGTGACAGAACTA+AGG	0.558116	2_4:-63665106	Msa0341780:CDS
TCAAGGCATATCCGGCATTG+TGG	0.559551	2_4:+63666130	None:intergenic
GCCATTGTGTAAAATCCGTA+TGG	0.559880	2_4:+63665700	None:intergenic
TTTCAATCTAAAATAATAGA+GGG	0.560425	2_4:+63666671	None:intergenic
ATACATATACCAGCTAGTAA+AGG	0.563392	2_4:+63665075	None:intergenic
GGTACCTTTGCAATGGCAGG+GGG	0.567201	2_4:+63666084	None:intergenic
AACTGGAGGTCTACCAAGGA+GGG	0.573090	2_4:-63666031	Msa0341780:CDS
AGAAGATCGAGAACATGTAA+AGG	0.577463	2_4:-63665147	Msa0341780:CDS
ATCCAGGGCAGGGCAGGGCA+GGG	0.580477	2_4:-63666486	Msa0341780:five_prime_UTR
GGTTATGAAGAACATCCATA+CGG	0.581353	2_4:-63665715	Msa0341780:CDS
GTGTTTGTCCTAGTTACCCG+AGG	0.592719	2_4:-63666732	Msa0341780:five_prime_UTR
TCAATTGGACGACGGACGGA+CGG	0.599620	2_4:+63666630	None:intergenic
TCTCATCATCATCCAGGGCA+GGG	0.601328	2_4:-63666496	Msa0341780:five_prime_UTR
ATTCTTGTTTGGCAAGAACA+TGG	0.604029	2_4:+63665509	None:intergenic
TCATCATCCAGGGCAGGGCA+GGG	0.613522	2_4:-63666491	Msa0341780:five_prime_UTR
AATCTAAAATAATAGAGGGA+CGG	0.615571	2_4:+63666675	None:intergenic
CGTTCGTTCGTAGACGAGAG+CGG	0.629782	2_4:+63666581	None:intergenic
CAAATGTCCCTAAAGATCGA+TGG	0.630129	2_4:-63665958	Msa0341780:CDS
ATTTAGCATACCCCACCTAG+TGG	0.635562	2_4:-63664874	Msa0341780:three_prime_UTR
ATGATGATGAGAGAAGAAAG+AGG	0.640375	2_4:+63666507	None:intergenic
ACATCCTTAGTTCTGTCACA+TGG	0.650556	2_4:+63665102	None:intergenic
CGATAACTGGAGGTCTACCA+AGG	0.652909	2_4:-63666035	Msa0341780:CDS
TGCCAAACAAGAATTGACAA+AGG	0.654420	2_4:-63665500	Msa0341780:intron
AATTATTCTCAATTGGACGA+CGG	0.662987	2_4:+63666622	None:intergenic
AGTTATCGAGACATGATCTG+TGG	0.663655	2_4:+63666050	None:intergenic
TAACTGGAGGTCTACCAAGG+AGG	0.663726	2_4:-63666032	Msa0341780:CDS
TTTGTCCTAGTTACCCGAGG+GGG	0.666331	2_4:-63666729	Msa0341780:five_prime_UTR
TTATTTGATGAAGAAGCATG+GGG	0.678694	2_4:+63664686	None:intergenic
ATGTCCCTAAAGATCGATGG+TGG	0.685209	2_4:-63665955	Msa0341780:CDS
GATCATGTCTCGATAACTGG+AGG	0.685887	2_4:-63666045	Msa0341780:CDS
TATATCATGATTGTCAGACG+TGG	0.692189	2_4:+63666195	None:intergenic
GTTTGTCCTAGTTACCCGAG+GGG	0.723175	2_4:-63666730	Msa0341780:five_prime_UTR
AAATAGGAATAATTTCACAG+AGG	0.778628	2_4:+63666221	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATTATTTTAGATTGAAAAT+TGG	-	chr2_4:63664771-63664790	Msa0341780:three_prime_UTR	10.0%
!!!	TCCTTTTTTATAAAAATTTA+AGG	-	chr2_4:63666215-63666234	Msa0341780:CDS	10.0%
!!!	ACCTTAAATTTTTATAAAAA+AGG	+	chr2_4:63666219-63666238	None:intergenic	10.0%
!!	TAATTATAGATATCATTTAA+TGG	+	chr2_4:63666488-63666507	None:intergenic	10.0%
!!!	TATTATTTTAGATTGAAAAT+TGG	-	chr2_4:63664771-63664790	Msa0341780:three_prime_UTR	10.0%
!!!	TCCTTTTTTATAAAAATTTA+AGG	-	chr2_4:63666215-63666234	Msa0341780:CDS	10.0%
!!!	ACCTTAAATTTTTATAAAAA+AGG	+	chr2_4:63666219-63666238	None:intergenic	10.0%
!!	TAATTATAGATATCATTTAA+TGG	+	chr2_4:63666488-63666507	None:intergenic	10.0%
!!!	TTTCAATCTAAAATAATAGA+GGG	+	chr2_4:63664769-63664788	None:intergenic	15.0%
!!!	TTTTCAATCTAAAATAATAG+AGG	+	chr2_4:63664770-63664789	None:intergenic	15.0%
!!	AAATGATATCTATAATTAAG+TGG	-	chr2_4:63666490-63666509	Msa0341780:five_prime_UTR	15.0%
!!!	TTTCAATCTAAAATAATAGA+GGG	+	chr2_4:63664769-63664788	None:intergenic	15.0%
!!!	TTTTCAATCTAAAATAATAG+AGG	+	chr2_4:63664770-63664789	None:intergenic	15.0%
!!	AAATGATATCTATAATTAAG+TGG	-	chr2_4:63666490-63666509	Msa0341780:five_prime_UTR	15.0%
!!	CAAACAAAATTATTCTCAAT+TGG	+	chr2_4:63664825-63664844	None:intergenic	20.0%
!!!	GAATAATTTTGTTTGTCTAT+CGG	-	chr2_4:63664830-63664849	Msa0341780:three_prime_UTR	20.0%
!!!	TAATCTATCTATTTCTTGTT+TGG	-	chr2_4:63665029-63665048	Msa0341780:three_prime_UTR	20.0%
!!!	AATCTATCTATTTCTTGTTT+GGG	-	chr2_4:63665030-63665049	Msa0341780:three_prime_UTR	20.0%
!!	ATGAAATACATAAAATCGTA+GGG	+	chr2_4:63665593-63665612	None:intergenic	20.0%
!!	AATGAAATACATAAAATCGT+AGG	+	chr2_4:63665594-63665613	None:intergenic	20.0%
!!	GTGCTTATTTATAAATTCTA+TGG	-	chr2_4:63665677-63665696	Msa0341780:intron	20.0%
!!	TTCTTTATAGCAATAATATG+TGG	-	chr2_4:63665881-63665900	Msa0341780:intron	20.0%
!!	TCTTTATAGCAATAATATGT+GGG	-	chr2_4:63665882-63665901	Msa0341780:intron	20.0%
!!	TAAACAATACAATACAAGAA+CGG	+	chr2_4:63666157-63666176	None:intergenic	20.0%
!!	TTCTTGTATTGTATTGTTTA+AGG	-	chr2_4:63666157-63666176	Msa0341780:CDS	20.0%
!!	AAACTTAAACAAGAAAGAAT+GGG	+	chr2_4:63666390-63666409	None:intergenic	20.0%
!!	TCTAATTTAACATCTAAAAG+TGG	+	chr2_4:63666421-63666440	None:intergenic	20.0%
!!!	TATTCTTTTATGGTGAAATT+AGG	+	chr2_4:63666716-63666735	None:intergenic	20.0%
!!	CAAACAAAATTATTCTCAAT+TGG	+	chr2_4:63664825-63664844	None:intergenic	20.0%
!!!	GAATAATTTTGTTTGTCTAT+CGG	-	chr2_4:63664830-63664849	Msa0341780:three_prime_UTR	20.0%
!!!	TAATCTATCTATTTCTTGTT+TGG	-	chr2_4:63665029-63665048	Msa0341780:three_prime_UTR	20.0%
!!!	AATCTATCTATTTCTTGTTT+GGG	-	chr2_4:63665030-63665049	Msa0341780:three_prime_UTR	20.0%
!!	ATGAAATACATAAAATCGTA+GGG	+	chr2_4:63665593-63665612	None:intergenic	20.0%
!!	AATGAAATACATAAAATCGT+AGG	+	chr2_4:63665594-63665613	None:intergenic	20.0%
!!	GTGCTTATTTATAAATTCTA+TGG	-	chr2_4:63665677-63665696	Msa0341780:intron	20.0%
!!	TTCTTTATAGCAATAATATG+TGG	-	chr2_4:63665881-63665900	Msa0341780:intron	20.0%
!!	TCTTTATAGCAATAATATGT+GGG	-	chr2_4:63665882-63665901	Msa0341780:intron	20.0%
!!	TAAACAATACAATACAAGAA+CGG	+	chr2_4:63666157-63666176	None:intergenic	20.0%
!!	TTCTTGTATTGTATTGTTTA+AGG	-	chr2_4:63666157-63666176	Msa0341780:CDS	20.0%
!!	AAACTTAAACAAGAAAGAAT+GGG	+	chr2_4:63666390-63666409	None:intergenic	20.0%
!!	TCTAATTTAACATCTAAAAG+TGG	+	chr2_4:63666421-63666440	None:intergenic	20.0%
!!!	TATTCTTTTATGGTGAAATT+AGG	+	chr2_4:63666716-63666735	None:intergenic	20.0%
!!	AATCTAAAATAATAGAGGGA+CGG	+	chr2_4:63664765-63664784	None:intergenic	25.0%
!	TTAGATTGAAAATTGGTAAG+TGG	-	chr2_4:63664778-63664797	Msa0341780:three_prime_UTR	25.0%
!	TAGATTGAAAATTGGTAAGT+GGG	-	chr2_4:63664779-63664798	Msa0341780:three_prime_UTR	25.0%
!	AGAATGAATGAATGAATCTA+GGG	+	chr2_4:63664884-63664903	None:intergenic	25.0%
!!!	GATTTGATTTGATTGATTTC+AGG	+	chr2_4:63664907-63664926	None:intergenic	25.0%
!!	ATCTATCTATTTCTTGTTTG+GGG	-	chr2_4:63665031-63665050	Msa0341780:three_prime_UTR	25.0%
!!	ATTCTTTTCTTTTCTTTTGC+AGG	-	chr2_4:63665076-63665095	Msa0341780:exon	25.0%
!	AAATAGGAATAATTTCACAG+AGG	+	chr2_4:63665219-63665238	None:intergenic	25.0%
!	TGAAATACATAAAATCGTAG+GGG	+	chr2_4:63665592-63665611	None:intergenic	25.0%
!	AAACAATACAATACAAGAAC+GGG	+	chr2_4:63666156-63666175	None:intergenic	25.0%
!!	AATTGATTCTGAGTCATATA+AGG	-	chr2_4:63666185-63666204	Msa0341780:CDS	25.0%
!	GAAACTTAAACAAGAAAGAA+TGG	+	chr2_4:63666391-63666410	None:intergenic	25.0%
!!	TTCTTTCTTGTTTAAGTTTC+CGG	-	chr2_4:63666391-63666410	Msa0341780:intron	25.0%
!!	TAGAAACATTCTAAAGAGAA+AGG	-	chr2_4:63666437-63666456	Msa0341780:intron	25.0%
!	CATATCCATAAAAGGATAAT+AGG	+	chr2_4:63666642-63666661	None:intergenic	25.0%
!!	CTATTATCCTTTTATGGATA+TGG	-	chr2_4:63666640-63666659	Msa0341780:five_prime_UTR	25.0%
!	AATAAGTCCATATCCATAAA+AGG	+	chr2_4:63666650-63666669	None:intergenic	25.0%
!	TATTTATAGCAATGCATAGA+AGG	-	chr2_4:63666666-63666685	Msa0341780:five_prime_UTR	25.0%
!!	AATCTAAAATAATAGAGGGA+CGG	+	chr2_4:63664765-63664784	None:intergenic	25.0%
!	TTAGATTGAAAATTGGTAAG+TGG	-	chr2_4:63664778-63664797	Msa0341780:three_prime_UTR	25.0%
!	TAGATTGAAAATTGGTAAGT+GGG	-	chr2_4:63664779-63664798	Msa0341780:three_prime_UTR	25.0%
!	AGAATGAATGAATGAATCTA+GGG	+	chr2_4:63664884-63664903	None:intergenic	25.0%
!!!	GATTTGATTTGATTGATTTC+AGG	+	chr2_4:63664907-63664926	None:intergenic	25.0%
!!	ATCTATCTATTTCTTGTTTG+GGG	-	chr2_4:63665031-63665050	Msa0341780:three_prime_UTR	25.0%
!!	ATTCTTTTCTTTTCTTTTGC+AGG	-	chr2_4:63665076-63665095	Msa0341780:exon	25.0%
!	AAATAGGAATAATTTCACAG+AGG	+	chr2_4:63665219-63665238	None:intergenic	25.0%
!	TGAAATACATAAAATCGTAG+GGG	+	chr2_4:63665592-63665611	None:intergenic	25.0%
!	AAACAATACAATACAAGAAC+GGG	+	chr2_4:63666156-63666175	None:intergenic	25.0%
!!	AATTGATTCTGAGTCATATA+AGG	-	chr2_4:63666185-63666204	Msa0341780:CDS	25.0%
!	GAAACTTAAACAAGAAAGAA+TGG	+	chr2_4:63666391-63666410	None:intergenic	25.0%
!!	TTCTTTCTTGTTTAAGTTTC+CGG	-	chr2_4:63666391-63666410	Msa0341780:intron	25.0%
!!	TAGAAACATTCTAAAGAGAA+AGG	-	chr2_4:63666437-63666456	Msa0341780:intron	25.0%
!	CATATCCATAAAAGGATAAT+AGG	+	chr2_4:63666642-63666661	None:intergenic	25.0%
!!	CTATTATCCTTTTATGGATA+TGG	-	chr2_4:63666640-63666659	Msa0341780:five_prime_UTR	25.0%
!	AATAAGTCCATATCCATAAA+AGG	+	chr2_4:63666650-63666669	None:intergenic	25.0%
!	TATTTATAGCAATGCATAGA+AGG	-	chr2_4:63666666-63666685	Msa0341780:five_prime_UTR	25.0%
	AATTATTCTCAATTGGACGA+CGG	+	chr2_4:63664818-63664837	None:intergenic	30.0%
	GAGAATGAATGAATGAATCT+AGG	+	chr2_4:63664885-63664904	None:intergenic	30.0%
!	TCTATCTATTTCTTGTTTGG+GGG	-	chr2_4:63665032-63665051	Msa0341780:three_prime_UTR	30.0%
	ATTTCGGGAAATGTATAAGT+TGG	+	chr2_4:63665130-63665149	None:intergenic	30.0%
!	TTTGAAGCTAATTGCATTTC+GGG	+	chr2_4:63665145-63665164	None:intergenic	30.0%
!	GTTTGAAGCTAATTGCATTT+CGG	+	chr2_4:63665146-63665165	None:intergenic	30.0%
!	TTTCTGAAGAAGAAGAATCT+TGG	+	chr2_4:63665177-63665196	None:intergenic	30.0%
!	TTTTCCTTTTCTAATTGCAC+AGG	-	chr2_4:63665637-63665656	Msa0341780:intron	30.0%
	GATGAACTTAGAGAAATGTT+TGG	-	chr2_4:63665701-63665720	Msa0341780:CDS	30.0%
	TTTGAGAGTGGTGAATAAAT+GGG	+	chr2_4:63665770-63665789	None:intergenic	30.0%
	ATTTGAGAGTGGTGAATAAA+TGG	+	chr2_4:63665771-63665790	None:intergenic	30.0%
	AAAAGCTGCAAACAAACATT+GGG	+	chr2_4:63665799-63665818	None:intergenic	30.0%
	AAAACAAAGTCAGAAATGAG+TGG	+	chr2_4:63665822-63665841	None:intergenic	30.0%
!!	TAACATGCTTCACTTTTATG+TGG	+	chr2_4:63666017-63666036	None:intergenic	30.0%
	GGTCATAAGATATGCAATTT+CGG	-	chr2_4:63666111-63666130	Msa0341780:CDS	30.0%
	GTCATAAGATATGCAATTTC+GGG	-	chr2_4:63666112-63666131	Msa0341780:CDS	30.0%
	ATACATATACCAGCTAGTAA+AGG	+	chr2_4:63666365-63666384	None:intergenic	30.0%
!	GTGTACCTATTATCCTTTTA+TGG	-	chr2_4:63666634-63666653	Msa0341780:five_prime_UTR	30.0%
!	GACAACTGCATATTCTTTTA+TGG	+	chr2_4:63666726-63666745	None:intergenic	30.0%
	AATTATTCTCAATTGGACGA+CGG	+	chr2_4:63664818-63664837	None:intergenic	30.0%
	GAGAATGAATGAATGAATCT+AGG	+	chr2_4:63664885-63664904	None:intergenic	30.0%
!	TCTATCTATTTCTTGTTTGG+GGG	-	chr2_4:63665032-63665051	Msa0341780:three_prime_UTR	30.0%
	ATTTCGGGAAATGTATAAGT+TGG	+	chr2_4:63665130-63665149	None:intergenic	30.0%
!	TTTGAAGCTAATTGCATTTC+GGG	+	chr2_4:63665145-63665164	None:intergenic	30.0%
!	GTTTGAAGCTAATTGCATTT+CGG	+	chr2_4:63665146-63665165	None:intergenic	30.0%
!	TTTCTGAAGAAGAAGAATCT+TGG	+	chr2_4:63665177-63665196	None:intergenic	30.0%
!	TTTTCCTTTTCTAATTGCAC+AGG	-	chr2_4:63665637-63665656	Msa0341780:intron	30.0%
	GATGAACTTAGAGAAATGTT+TGG	-	chr2_4:63665701-63665720	Msa0341780:CDS	30.0%
	TTTGAGAGTGGTGAATAAAT+GGG	+	chr2_4:63665770-63665789	None:intergenic	30.0%
	ATTTGAGAGTGGTGAATAAA+TGG	+	chr2_4:63665771-63665790	None:intergenic	30.0%
	AAAAGCTGCAAACAAACATT+GGG	+	chr2_4:63665799-63665818	None:intergenic	30.0%
	AAAACAAAGTCAGAAATGAG+TGG	+	chr2_4:63665822-63665841	None:intergenic	30.0%
!!	TAACATGCTTCACTTTTATG+TGG	+	chr2_4:63666017-63666036	None:intergenic	30.0%
	GGTCATAAGATATGCAATTT+CGG	-	chr2_4:63666111-63666130	Msa0341780:CDS	30.0%
	GTCATAAGATATGCAATTTC+GGG	-	chr2_4:63666112-63666131	Msa0341780:CDS	30.0%
	ATACATATACCAGCTAGTAA+AGG	+	chr2_4:63666365-63666384	None:intergenic	30.0%
!	GTGTACCTATTATCCTTTTA+TGG	-	chr2_4:63666634-63666653	Msa0341780:five_prime_UTR	30.0%
!	GACAACTGCATATTCTTTTA+TGG	+	chr2_4:63666726-63666745	None:intergenic	30.0%
!	ATGATGATGAGAGAAGAAAG+AGG	+	chr2_4:63664933-63664952	None:intergenic	35.0%
	AGAAGAAGAATCTTGGTTGT+CGG	+	chr2_4:63665170-63665189	None:intergenic	35.0%
	TCACAGAGGTGATTCAATAT+GGG	+	chr2_4:63665205-63665224	None:intergenic	35.0%
	TTCACAGAGGTGATTCAATA+TGG	+	chr2_4:63665206-63665225	None:intergenic	35.0%
	TATATCATGATTGTCAGACG+TGG	+	chr2_4:63665245-63665264	None:intergenic	35.0%
!	TGATCTGTGGACATACTTTT+GGG	+	chr2_4:63665377-63665396	None:intergenic	35.0%
!	ATGATCTGTGGACATACTTT+TGG	+	chr2_4:63665378-63665397	None:intergenic	35.0%
	GAAAATGAATGCATGATCTC+TGG	+	chr2_4:63665536-63665555	None:intergenic	35.0%
	ATACATAAAATCGTAGGGGA+TGG	+	chr2_4:63665588-63665607	None:intergenic	35.0%
	ACAACCTGTGCAATTAGAAA+AGG	+	chr2_4:63665644-63665663	None:intergenic	35.0%
	GGTTATGAAGAACATCCATA+CGG	-	chr2_4:63665722-63665741	Msa0341780:CDS	35.0%
!	TCCATACGGATTTTACACAA+TGG	-	chr2_4:63665736-63665755	Msa0341780:CDS	35.0%
	GAAAAGCTGCAAACAAACAT+TGG	+	chr2_4:63665800-63665819	None:intergenic	35.0%
!	ATTCTTGTTTGGCAAGAACA+TGG	+	chr2_4:63665931-63665950	None:intergenic	35.0%
	TGCCAAACAAGAATTGACAA+AGG	-	chr2_4:63665937-63665956	Msa0341780:CDS	35.0%
	GACCTTTGTCAATTCTTGTT+TGG	+	chr2_4:63665942-63665961	None:intergenic	35.0%
!!	TGCTTCACTTTTATGTGGAT+TGG	+	chr2_4:63666012-63666031	None:intergenic	35.0%
!!!	CTGTTTACTTTTTTGACGTC+AGG	-	chr2_4:63666257-63666276	Msa0341780:CDS	35.0%
	AGAAGATCGAGAACATGTAA+AGG	-	chr2_4:63666290-63666309	Msa0341780:CDS	35.0%
	AACATCTAAAAGTGGAAGAC+CGG	+	chr2_4:63666413-63666432	None:intergenic	35.0%
!	GGTTTTGCCTATATTTTCGT+TGG	+	chr2_4:63666467-63666486	None:intergenic	35.0%
!	AAATCTTTTTCCACTAGGTG+GGG	+	chr2_4:63666576-63666595	None:intergenic	35.0%
!	CAAATCTTTTTCCACTAGGT+GGG	+	chr2_4:63666577-63666596	None:intergenic	35.0%
!	CAACCAAATCTTTTTCCACT+AGG	+	chr2_4:63666581-63666600	None:intergenic	35.0%
!	CTAGTGGAAAAAGATTTGGT+TGG	-	chr2_4:63666579-63666598	Msa0341780:five_prime_UTR	35.0%
!	ATGATGATGAGAGAAGAAAG+AGG	+	chr2_4:63664933-63664952	None:intergenic	35.0%
	AGAAGAAGAATCTTGGTTGT+CGG	+	chr2_4:63665170-63665189	None:intergenic	35.0%
	TCACAGAGGTGATTCAATAT+GGG	+	chr2_4:63665205-63665224	None:intergenic	35.0%
	TTCACAGAGGTGATTCAATA+TGG	+	chr2_4:63665206-63665225	None:intergenic	35.0%
	TATATCATGATTGTCAGACG+TGG	+	chr2_4:63665245-63665264	None:intergenic	35.0%
!	TGATCTGTGGACATACTTTT+GGG	+	chr2_4:63665377-63665396	None:intergenic	35.0%
!	ATGATCTGTGGACATACTTT+TGG	+	chr2_4:63665378-63665397	None:intergenic	35.0%
	GAAAATGAATGCATGATCTC+TGG	+	chr2_4:63665536-63665555	None:intergenic	35.0%
	ATACATAAAATCGTAGGGGA+TGG	+	chr2_4:63665588-63665607	None:intergenic	35.0%
	ACAACCTGTGCAATTAGAAA+AGG	+	chr2_4:63665644-63665663	None:intergenic	35.0%
	GGTTATGAAGAACATCCATA+CGG	-	chr2_4:63665722-63665741	Msa0341780:CDS	35.0%
!	TCCATACGGATTTTACACAA+TGG	-	chr2_4:63665736-63665755	Msa0341780:CDS	35.0%
	GAAAAGCTGCAAACAAACAT+TGG	+	chr2_4:63665800-63665819	None:intergenic	35.0%
!	ATTCTTGTTTGGCAAGAACA+TGG	+	chr2_4:63665931-63665950	None:intergenic	35.0%
	TGCCAAACAAGAATTGACAA+AGG	-	chr2_4:63665937-63665956	Msa0341780:CDS	35.0%
	GACCTTTGTCAATTCTTGTT+TGG	+	chr2_4:63665942-63665961	None:intergenic	35.0%
!!	TGCTTCACTTTTATGTGGAT+TGG	+	chr2_4:63666012-63666031	None:intergenic	35.0%
!!!	CTGTTTACTTTTTTGACGTC+AGG	-	chr2_4:63666257-63666276	Msa0341780:CDS	35.0%
	AGAAGATCGAGAACATGTAA+AGG	-	chr2_4:63666290-63666309	Msa0341780:CDS	35.0%
	AACATCTAAAAGTGGAAGAC+CGG	+	chr2_4:63666413-63666432	None:intergenic	35.0%
!	GGTTTTGCCTATATTTTCGT+TGG	+	chr2_4:63666467-63666486	None:intergenic	35.0%
!	AAATCTTTTTCCACTAGGTG+GGG	+	chr2_4:63666576-63666595	None:intergenic	35.0%
!	CAAATCTTTTTCCACTAGGT+GGG	+	chr2_4:63666577-63666596	None:intergenic	35.0%
!	CAACCAAATCTTTTTCCACT+AGG	+	chr2_4:63666581-63666600	None:intergenic	35.0%
!	CTAGTGGAAAAAGATTTGGT+TGG	-	chr2_4:63666579-63666598	Msa0341780:five_prime_UTR	35.0%
	TTCTTCTCTCATCATCATCC+AGG	-	chr2_4:63664935-63664954	Msa0341780:three_prime_UTR	40.0%
	TCTTCTCTCATCATCATCCA+GGG	-	chr2_4:63664936-63664955	Msa0341780:three_prime_UTR	40.0%
	TGCATAGCAGCATCATATGA+TGG	-	chr2_4:63665000-63665019	Msa0341780:three_prime_UTR	40.0%
!	CTATTTCTTGTTTGGGGGTT+TGG	-	chr2_4:63665037-63665056	Msa0341780:three_prime_UTR	40.0%
	GAGGTGATTCAATATGGGTT+GGG	+	chr2_4:63665200-63665219	None:intergenic	40.0%
	AGAGGTGATTCAATATGGGT+TGG	+	chr2_4:63665201-63665220	None:intergenic	40.0%
!!	ACTTTTGGGTACCTTTGCAA+TGG	+	chr2_4:63665363-63665382	None:intergenic	40.0%
	AGTTATCGAGACATGATCTG+TGG	+	chr2_4:63665390-63665409	None:intergenic	40.0%
	ACAGATCATGTCTCGATAAC+TGG	-	chr2_4:63665389-63665408	Msa0341780:intron	40.0%
!	CATCGATCTTTAGGGACATT+TGG	+	chr2_4:63665481-63665500	None:intergenic	40.0%
	CAAATGTCCCTAAAGATCGA+TGG	-	chr2_4:63665479-63665498	Msa0341780:intron	40.0%
	TCAACCACCATCGATCTTTA+GGG	+	chr2_4:63665489-63665508	None:intergenic	40.0%
	GCCATTGTGTAAAATCCGTA+TGG	+	chr2_4:63665740-63665759	None:intergenic	40.0%
!	TACGGATTTTACACAATGGC+TGG	-	chr2_4:63665740-63665759	Msa0341780:CDS	40.0%
	ATTGGGCATGAATTTGAGAG+TGG	+	chr2_4:63665782-63665801	None:intergenic	40.0%
!	TGCAGTTCTCGCCATTATTT+TGG	-	chr2_4:63665841-63665860	Msa0341780:intron	40.0%
!!!	AGTTCTCGCCATTATTTTGG+TGG	-	chr2_4:63665844-63665863	Msa0341780:intron	40.0%
!!!	GTTCTCGCCATTATTTTGGT+GGG	-	chr2_4:63665845-63665864	Msa0341780:intron	40.0%
	GAGCAAACCCACCAAAATAA+TGG	+	chr2_4:63665855-63665874	None:intergenic	40.0%
!!!	ATTTTGGTGGGTTTGCTCTA+TGG	-	chr2_4:63665857-63665876	Msa0341780:intron	40.0%
	CTTGCTGCAAAACACATCTT+TGG	-	chr2_4:63666090-63666109	Msa0341780:CDS	40.0%
!!	TTTTTGACGTCAGGAGTATG+TGG	-	chr2_4:63666266-63666285	Msa0341780:CDS	40.0%
!!	ACATCCTTAGTTCTGTCACA+TGG	+	chr2_4:63666338-63666357	None:intergenic	40.0%
	TGTGACAGAACTAAGGATGT+TGG	-	chr2_4:63666338-63666357	Msa0341780:five_prime_UTR	40.0%
	GTGACAGAACTAAGGATGTT+GGG	-	chr2_4:63666339-63666358	Msa0341780:five_prime_UTR	40.0%
	AGGCAGACCAACGAAAATAT+AGG	-	chr2_4:63666457-63666476	Msa0341780:intron	40.0%
!	CCAAATCTTTTTCCACTAGG+TGG	+	chr2_4:63666578-63666597	None:intergenic	40.0%
	CCACCTAGTGGAAAAAGATT+TGG	-	chr2_4:63666575-63666594	Msa0341780:five_prime_UTR	40.0%
	TTCTTCTCTCATCATCATCC+AGG	-	chr2_4:63664935-63664954	Msa0341780:three_prime_UTR	40.0%
	TCTTCTCTCATCATCATCCA+GGG	-	chr2_4:63664936-63664955	Msa0341780:three_prime_UTR	40.0%
	TGCATAGCAGCATCATATGA+TGG	-	chr2_4:63665000-63665019	Msa0341780:three_prime_UTR	40.0%
!	CTATTTCTTGTTTGGGGGTT+TGG	-	chr2_4:63665037-63665056	Msa0341780:three_prime_UTR	40.0%
	GAGGTGATTCAATATGGGTT+GGG	+	chr2_4:63665200-63665219	None:intergenic	40.0%
	AGAGGTGATTCAATATGGGT+TGG	+	chr2_4:63665201-63665220	None:intergenic	40.0%
!!	ACTTTTGGGTACCTTTGCAA+TGG	+	chr2_4:63665363-63665382	None:intergenic	40.0%
	AGTTATCGAGACATGATCTG+TGG	+	chr2_4:63665390-63665409	None:intergenic	40.0%
	ACAGATCATGTCTCGATAAC+TGG	-	chr2_4:63665389-63665408	Msa0341780:intron	40.0%
!	CATCGATCTTTAGGGACATT+TGG	+	chr2_4:63665481-63665500	None:intergenic	40.0%
	CAAATGTCCCTAAAGATCGA+TGG	-	chr2_4:63665479-63665498	Msa0341780:intron	40.0%
	TCAACCACCATCGATCTTTA+GGG	+	chr2_4:63665489-63665508	None:intergenic	40.0%
	GCCATTGTGTAAAATCCGTA+TGG	+	chr2_4:63665740-63665759	None:intergenic	40.0%
!	TACGGATTTTACACAATGGC+TGG	-	chr2_4:63665740-63665759	Msa0341780:CDS	40.0%
	ATTGGGCATGAATTTGAGAG+TGG	+	chr2_4:63665782-63665801	None:intergenic	40.0%
!	TGCAGTTCTCGCCATTATTT+TGG	-	chr2_4:63665841-63665860	Msa0341780:intron	40.0%
!!!	AGTTCTCGCCATTATTTTGG+TGG	-	chr2_4:63665844-63665863	Msa0341780:intron	40.0%
!!!	GTTCTCGCCATTATTTTGGT+GGG	-	chr2_4:63665845-63665864	Msa0341780:intron	40.0%
	GAGCAAACCCACCAAAATAA+TGG	+	chr2_4:63665855-63665874	None:intergenic	40.0%
!!!	ATTTTGGTGGGTTTGCTCTA+TGG	-	chr2_4:63665857-63665876	Msa0341780:intron	40.0%
	CTTGCTGCAAAACACATCTT+TGG	-	chr2_4:63666090-63666109	Msa0341780:CDS	40.0%
!!	TTTTTGACGTCAGGAGTATG+TGG	-	chr2_4:63666266-63666285	Msa0341780:CDS	40.0%
!!	ACATCCTTAGTTCTGTCACA+TGG	+	chr2_4:63666338-63666357	None:intergenic	40.0%
	TGTGACAGAACTAAGGATGT+TGG	-	chr2_4:63666338-63666357	Msa0341780:five_prime_UTR	40.0%
	GTGACAGAACTAAGGATGTT+GGG	-	chr2_4:63666339-63666358	Msa0341780:five_prime_UTR	40.0%
	AGGCAGACCAACGAAAATAT+AGG	-	chr2_4:63666457-63666476	Msa0341780:intron	40.0%
!	CCAAATCTTTTTCCACTAGG+TGG	+	chr2_4:63666578-63666597	None:intergenic	40.0%
	CCACCTAGTGGAAAAAGATT+TGG	-	chr2_4:63666575-63666594	Msa0341780:five_prime_UTR	40.0%
	TGTTTGTCCTAGTTACCCGA+GGG	-	chr2_4:63664706-63664725	Msa0341780:three_prime_UTR	45.0%
	ATTCTCAATTGGACGACGGA+CGG	+	chr2_4:63664814-63664833	None:intergenic	45.0%
	TTGTCAGACGTGGCAGAAAT+AGG	+	chr2_4:63665235-63665254	None:intergenic	45.0%
	CTCCAAGATCAAGGCATATC+CGG	+	chr2_4:63665318-63665337	None:intergenic	45.0%
	AGTCTTCTCCTCCAAGATCA+AGG	+	chr2_4:63665327-63665346	None:intergenic	45.0%
	GATCATGTCTCGATAACTGG+AGG	-	chr2_4:63665392-63665411	Msa0341780:intron	45.0%
	AGAAAAAGCAAAGCCCTCCT+TGG	+	chr2_4:63665422-63665441	None:intergenic	45.0%
	ATGTCCCTAAAGATCGATGG+TGG	-	chr2_4:63665482-63665501	Msa0341780:intron	45.0%
	CTCAACCACCATCGATCTTT+AGG	+	chr2_4:63665490-63665509	None:intergenic	45.0%
!!	TGCACAGGTTGTTGCTTTCT+TGG	-	chr2_4:63665652-63665671	Msa0341780:intron	45.0%
!!	GCACAGGTTGTTGCTTTCTT+GGG	-	chr2_4:63665653-63665672	Msa0341780:intron	45.0%
	GTTTGGCAAGAACATGGTAG+TGG	+	chr2_4:63665925-63665944	None:intergenic	45.0%
	CTTGCTGCAAAACACGTCTT+TGG	-	chr2_4:63666055-63666074	Msa0341780:CDS	45.0%
!!	TTAGTTCTGTCACATGGCTG+GGG	+	chr2_4:63666332-63666351	None:intergenic	45.0%
!!	CTTAGTTCTGTCACATGGCT+GGG	+	chr2_4:63666333-63666352	None:intergenic	45.0%
	ACTAGGTGGGGTATGCTAAA+TGG	+	chr2_4:63666564-63666583	None:intergenic	45.0%
	ATTTAGCATACCCCACCTAG+TGG	-	chr2_4:63666563-63666582	Msa0341780:five_prime_UTR	45.0%
	TGTTTGTCCTAGTTACCCGA+GGG	-	chr2_4:63664706-63664725	Msa0341780:three_prime_UTR	45.0%
	ATTCTCAATTGGACGACGGA+CGG	+	chr2_4:63664814-63664833	None:intergenic	45.0%
	TTGTCAGACGTGGCAGAAAT+AGG	+	chr2_4:63665235-63665254	None:intergenic	45.0%
	CTCCAAGATCAAGGCATATC+CGG	+	chr2_4:63665318-63665337	None:intergenic	45.0%
	AGTCTTCTCCTCCAAGATCA+AGG	+	chr2_4:63665327-63665346	None:intergenic	45.0%
	GATCATGTCTCGATAACTGG+AGG	-	chr2_4:63665392-63665411	Msa0341780:intron	45.0%
	AGAAAAAGCAAAGCCCTCCT+TGG	+	chr2_4:63665422-63665441	None:intergenic	45.0%
	ATGTCCCTAAAGATCGATGG+TGG	-	chr2_4:63665482-63665501	Msa0341780:intron	45.0%
	CTCAACCACCATCGATCTTT+AGG	+	chr2_4:63665490-63665509	None:intergenic	45.0%
!!	TGCACAGGTTGTTGCTTTCT+TGG	-	chr2_4:63665652-63665671	Msa0341780:intron	45.0%
!!	GCACAGGTTGTTGCTTTCTT+GGG	-	chr2_4:63665653-63665672	Msa0341780:intron	45.0%
	GTTTGGCAAGAACATGGTAG+TGG	+	chr2_4:63665925-63665944	None:intergenic	45.0%
	CTTGCTGCAAAACACGTCTT+TGG	-	chr2_4:63666055-63666074	Msa0341780:CDS	45.0%
!!	TTAGTTCTGTCACATGGCTG+GGG	+	chr2_4:63666332-63666351	None:intergenic	45.0%
!!	CTTAGTTCTGTCACATGGCT+GGG	+	chr2_4:63666333-63666352	None:intergenic	45.0%
	ACTAGGTGGGGTATGCTAAA+TGG	+	chr2_4:63666564-63666583	None:intergenic	45.0%
	ATTTAGCATACCCCACCTAG+TGG	-	chr2_4:63666563-63666582	Msa0341780:five_prime_UTR	45.0%
	GTGTTTGTCCTAGTTACCCG+AGG	-	chr2_4:63664705-63664724	Msa0341780:three_prime_UTR	50.0%
	GTTTGTCCTAGTTACCCGAG+GGG	-	chr2_4:63664707-63664726	Msa0341780:three_prime_UTR	50.0%
	TTTGTCCTAGTTACCCGAGG+GGG	-	chr2_4:63664708-63664727	Msa0341780:three_prime_UTR	50.0%
	AATAGAGGGACGGACGTTGT+TGG	+	chr2_4:63664755-63664774	None:intergenic	50.0%
	TCTCATCATCATCCAGGGCA+GGG	-	chr2_4:63664941-63664960	Msa0341780:three_prime_UTR	50.0%
	ATGCTGATCACCCACAATGC+CGG	-	chr2_4:63665296-63665315	Msa0341780:intron	50.0%
	CAAGGCATATCCGGCATTGT+GGG	+	chr2_4:63665309-63665328	None:intergenic	50.0%
	TCAAGGCATATCCGGCATTG+TGG	+	chr2_4:63665310-63665329	None:intergenic	50.0%
	TGCCGGATATGCCTTGATCT+TGG	-	chr2_4:63665313-63665332	Msa0341780:intron	50.0%
	CGGATATGCCTTGATCTTGG+AGG	-	chr2_4:63665316-63665335	Msa0341780:intron	50.0%
	TGGGTACCTTTGCAATGGCA+GGG	+	chr2_4:63665358-63665377	None:intergenic	50.0%
	TTGGGTACCTTTGCAATGGC+AGG	+	chr2_4:63665359-63665378	None:intergenic	50.0%
	CGATAACTGGAGGTCTACCA+AGG	-	chr2_4:63665402-63665421	Msa0341780:intron	50.0%
	TAACTGGAGGTCTACCAAGG+AGG	-	chr2_4:63665405-63665424	Msa0341780:intron	50.0%
	AACTGGAGGTCTACCAAGGA+GGG	-	chr2_4:63665406-63665425	Msa0341780:intron	50.0%
!!	CCTTAGTTCTGTCACATGGC+TGG	+	chr2_4:63666334-63666353	None:intergenic	50.0%
	CCAGCCATGTGACAGAACTA+AGG	-	chr2_4:63666331-63666350	Msa0341780:five_prime_UTR	50.0%
	GATGTTGGGCCTTTACTAGC+TGG	-	chr2_4:63666353-63666372	Msa0341780:intron	50.0%
	GTGTTTGTCCTAGTTACCCG+AGG	-	chr2_4:63664705-63664724	Msa0341780:three_prime_UTR	50.0%
	GTTTGTCCTAGTTACCCGAG+GGG	-	chr2_4:63664707-63664726	Msa0341780:three_prime_UTR	50.0%
	TTTGTCCTAGTTACCCGAGG+GGG	-	chr2_4:63664708-63664727	Msa0341780:three_prime_UTR	50.0%
	AATAGAGGGACGGACGTTGT+TGG	+	chr2_4:63664755-63664774	None:intergenic	50.0%
	TCTCATCATCATCCAGGGCA+GGG	-	chr2_4:63664941-63664960	Msa0341780:three_prime_UTR	50.0%
	ATGCTGATCACCCACAATGC+CGG	-	chr2_4:63665296-63665315	Msa0341780:intron	50.0%
	CAAGGCATATCCGGCATTGT+GGG	+	chr2_4:63665309-63665328	None:intergenic	50.0%
	TCAAGGCATATCCGGCATTG+TGG	+	chr2_4:63665310-63665329	None:intergenic	50.0%
	TGCCGGATATGCCTTGATCT+TGG	-	chr2_4:63665313-63665332	Msa0341780:intron	50.0%
	CGGATATGCCTTGATCTTGG+AGG	-	chr2_4:63665316-63665335	Msa0341780:intron	50.0%
	TGGGTACCTTTGCAATGGCA+GGG	+	chr2_4:63665358-63665377	None:intergenic	50.0%
	TTGGGTACCTTTGCAATGGC+AGG	+	chr2_4:63665359-63665378	None:intergenic	50.0%
	CGATAACTGGAGGTCTACCA+AGG	-	chr2_4:63665402-63665421	Msa0341780:intron	50.0%
	TAACTGGAGGTCTACCAAGG+AGG	-	chr2_4:63665405-63665424	Msa0341780:intron	50.0%
	AACTGGAGGTCTACCAAGGA+GGG	-	chr2_4:63665406-63665425	Msa0341780:intron	50.0%
!!	CCTTAGTTCTGTCACATGGC+TGG	+	chr2_4:63666334-63666353	None:intergenic	50.0%
	CCAGCCATGTGACAGAACTA+AGG	-	chr2_4:63666331-63666350	Msa0341780:five_prime_UTR	50.0%
	GATGTTGGGCCTTTACTAGC+TGG	-	chr2_4:63666353-63666372	Msa0341780:intron	50.0%
	TCAATTGGACGACGGACGGA+CGG	+	chr2_4:63664810-63664829	None:intergenic	55.0%
	CGTTCGTTCGTAGACGAGAG+CGG	+	chr2_4:63664859-63664878	None:intergenic	55.0%
	CTCTCATCATCATCCAGGGC+AGG	-	chr2_4:63664940-63664959	Msa0341780:three_prime_UTR	55.0%
	ATTGCCCCCTGCCATTGCAA+AGG	-	chr2_4:63665349-63665368	Msa0341780:intron	55.0%
	GGTACCTTTGCAATGGCAGG+GGG	+	chr2_4:63665356-63665375	None:intergenic	55.0%
	GGGTACCTTTGCAATGGCAG+GGG	+	chr2_4:63665357-63665376	None:intergenic	55.0%
	TCAATTGGACGACGGACGGA+CGG	+	chr2_4:63664810-63664829	None:intergenic	55.0%
	CGTTCGTTCGTAGACGAGAG+CGG	+	chr2_4:63664859-63664878	None:intergenic	55.0%
	CTCTCATCATCATCCAGGGC+AGG	-	chr2_4:63664940-63664959	Msa0341780:three_prime_UTR	55.0%
	ATTGCCCCCTGCCATTGCAA+AGG	-	chr2_4:63665349-63665368	Msa0341780:intron	55.0%
	GGTACCTTTGCAATGGCAGG+GGG	+	chr2_4:63665356-63665375	None:intergenic	55.0%
	GGGTACCTTTGCAATGGCAG+GGG	+	chr2_4:63665357-63665376	None:intergenic	55.0%
	TCACTCCCCCTCGGGTAACT+AGG	+	chr2_4:63664716-63664735	None:intergenic	60.0%
	ACCACACATCACTCCCCCTC+GGG	+	chr2_4:63664724-63664743	None:intergenic	60.0%
	CACCACACATCACTCCCCCT+CGG	+	chr2_4:63664725-63664744	None:intergenic	60.0%
	ATCATCATCCAGGGCAGGGC+AGG	-	chr2_4:63664945-63664964	Msa0341780:three_prime_UTR	60.0%
	TCATCATCCAGGGCAGGGCA+GGG	-	chr2_4:63664946-63664965	Msa0341780:three_prime_UTR	60.0%
	ACATGGCTGGGGTCGAGTTC+AGG	+	chr2_4:63666321-63666340	None:intergenic	60.0%
	TCACTCCCCCTCGGGTAACT+AGG	+	chr2_4:63664716-63664735	None:intergenic	60.0%
	ACCACACATCACTCCCCCTC+GGG	+	chr2_4:63664724-63664743	None:intergenic	60.0%
	CACCACACATCACTCCCCCT+CGG	+	chr2_4:63664725-63664744	None:intergenic	60.0%
	ATCATCATCCAGGGCAGGGC+AGG	-	chr2_4:63664945-63664964	Msa0341780:three_prime_UTR	60.0%
	TCATCATCCAGGGCAGGGCA+GGG	-	chr2_4:63664946-63664965	Msa0341780:three_prime_UTR	60.0%
	ACATGGCTGGGGTCGAGTTC+AGG	+	chr2_4:63666321-63666340	None:intergenic	60.0%
	ACCCGAGGGGGAGTGATGTG+TGG	-	chr2_4:63664720-63664739	Msa0341780:three_prime_UTR	65.0%
	CGAGGGGGAGTGATGTGTGG+TGG	-	chr2_4:63664723-63664742	Msa0341780:three_prime_UTR	65.0%
	TTGGACGACGGACGGACGGA+CGG	+	chr2_4:63664806-63664825	None:intergenic	65.0%
	ACCCGAGGGGGAGTGATGTG+TGG	-	chr2_4:63664720-63664739	Msa0341780:three_prime_UTR	65.0%
	CGAGGGGGAGTGATGTGTGG+TGG	-	chr2_4:63664723-63664742	Msa0341780:three_prime_UTR	65.0%
	TTGGACGACGGACGGACGGA+CGG	+	chr2_4:63664806-63664825	None:intergenic	65.0%
	ATCCAGGGCAGGGCAGGGCA+GGG	-	chr2_4:63664951-63664970	Msa0341780:three_prime_UTR	70.0%
	ATCCAGGGCAGGGCAGGGCA+GGG	-	chr2_4:63664951-63664970	Msa0341780:three_prime_UTR	70.0%
	CATCCAGGGCAGGGCAGGGC+AGG	-	chr2_4:63664950-63664969	Msa0341780:three_prime_UTR	75.0%
	CATCCAGGGCAGGGCAGGGC+AGG	-	chr2_4:63664950-63664969	Msa0341780:three_prime_UTR	75.0%
!	TGCCCTGCCCTGCCCTGCCC+TGG	+	chr2_4:63664956-63664975	None:intergenic	80.0%
!	AGGGCAGGGCAGGGCAGGGC+AGG	-	chr2_4:63664955-63664974	Msa0341780:three_prime_UTR	80.0%
!	GGGCAGGGCAGGGCAGGGCA+GGG	-	chr2_4:63664956-63664975	Msa0341780:three_prime_UTR	80.0%
!	AGGGCAGGGCAGGGCAGGGC+AGG	-	chr2_4:63664955-63664974	Msa0341780:three_prime_UTR	80.0%
!	TGCCCTGCCCTGCCCTGCCC+TGG	+	chr2_4:63664956-63664975	None:intergenic	80.0%
!	AGGGCAGGGCAGGGCAGGGC+AGG	-	chr2_4:63664955-63664974	Msa0341780:three_prime_UTR	80.0%
!	GGGCAGGGCAGGGCAGGGCA+GGG	-	chr2_4:63664956-63664975	Msa0341780:three_prime_UTR	80.0%
!	AGGGCAGGGCAGGGCAGGGC+AGG	-	chr2_4:63664955-63664974	Msa0341780:three_prime_UTR	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_4	gene	63664693	63666766	63664693	ID=Msa0341780;Name=Msa0341780
chr2_4	mRNA	63664693	63666766	63664693	ID=Msa0341780-mRNA-1;Parent=Msa0341780;Name=Msa0341780-mRNA-1;_AED=0.05;_eAED=0.05;_QI=334\|1\|1\|1\|0.75\|0.6\|5\|395\|243
chr2_4	exon	63664693	63665180	63664693	ID=Msa0341780-mRNA-1:exon:20347;Parent=Msa0341780-mRNA-1
chr2_4	exon	63665501	63665613	63665501	ID=Msa0341780-mRNA-1:exon:20346;Parent=Msa0341780-mRNA-1
chr2_4	exon	63665698	63665800	63665698	ID=Msa0341780-mRNA-1:exon:20345;Parent=Msa0341780-mRNA-1
chr2_4	exon	63665889	63666361	63665889	ID=Msa0341780-mRNA-1:exon:20344;Parent=Msa0341780-mRNA-1
chr2_4	exon	63666483	63666766	63666483	ID=Msa0341780-mRNA-1:exon:20343;Parent=Msa0341780-mRNA-1
chr2_4	five_prime_UTR	63666483	63666766	63666483	ID=Msa0341780-mRNA-1:five_prime_utr;Parent=Msa0341780-mRNA-1
chr2_4	five_prime_UTR	63666312	63666361	63666312	ID=Msa0341780-mRNA-1:five_prime_utr;Parent=Msa0341780-mRNA-1
chr2_4	CDS	63665889	63666311	63665889	ID=Msa0341780-mRNA-1:cds;Parent=Msa0341780-mRNA-1
chr2_4	CDS	63665698	63665800	63665698	ID=Msa0341780-mRNA-1:cds;Parent=Msa0341780-mRNA-1
chr2_4	CDS	63665501	63665613	63665501	ID=Msa0341780-mRNA-1:cds;Parent=Msa0341780-mRNA-1
chr2_4	CDS	63665088	63665180	63665088	ID=Msa0341780-mRNA-1:cds;Parent=Msa0341780-mRNA-1
chr2_4	three_prime_UTR	63664693	63665087	63664693	ID=Msa0341780-mRNA-1:three_prime_utr;Parent=Msa0341780-mRNA-1

Gene Sequence

>Msa0341780

ATGCAATTAGCTTCAAACACCGACAACCAAGATTCTTCTTCTTCAGAAACCCAACCCATATTGAATCACCTCTGTGAAATTATTCCTATTTCTGCCACGTCTGACAATCATGATATAGAGAATGAGTCTTCTCGTCTTGTTGTTGTAAATGCTGATCACCCACAATGCCGGATATGCCTTGATCTTGGAGGAGAAGACTTAATTGCCCCCTGCCATTGCAAAGGTACCCAAAAGTATGTCCACAGATCATGTCTCGATAACTGGAGGTCTACCAAGGAGGGCTTTGCTTTTTCTCACTGTACAGAATGCAGAGCTGTCTTCATAATTCGACCAAATGTCCCTAAAGATCGATGGTGGTTGAGATTGAAATTTCAGTTTCTTGTTGCCAGAGATCATGCATTCATTTTCATCATTGTTCAACTCGTTGTTGCTTTCTTGGGAGTGCTTATTTATAAATTCTATGGAGATGAACTTAGAGAAATGTTTGGTTATGAAGAACATCCATACGGATTTTACACAATGGCTGTTCTCGCCATTATTTTGGTGGGTTTGCTCTATGGCTTCTTTATAGCAATAATATGTGGGCAAAGAATCAATGAACGCCACTACCATGTTCTTGCCAAACAAGAATTGACAAAGGAGTATGTGGTAGAAGATCGAGAACATGTAAAGGATGTGCCTGAACTCGACCCCAGCCATGTGACAGAACTAAGGATGTTGGGCCTTTACTAG

Protein sequence

>Msa0341780

MQLASNTDNQDSSSSETQPILNHLCEIIPISATSDNHDIENESSRLVVVNADHPQCRICLDLGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRAVFIIRPNVPKDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLIYKFYGDELREMFGYEEHPYGFYTMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREHVKDVPELDPSHVTELRMLGLY*