Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1428880 | XP_003617791.1 | 99.340 | 303 | 2 | 0 | 1 | 303 | 1 | 303 | 0.0 | 601 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1428880 | sp|Q6AYB3|ISY1_RAT | 48.344 | 302 | 135 | 7 | 1 | 300 | 1 | 283 | 1.83e-79 | 245 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1428880 | G7K4N4 | 99.340 | 303 | 2 | 0 | 1 | 303 | 1 | 303 | 0.0 | 601 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0007440 | Msa1428880 | 0.810672 | 1.026224e-50 | -8.615850e-47 |
Msa0010490 | Msa1428880 | 0.813419 | 2.583899e-51 | -8.615850e-47 |
Msa0011960 | Msa1428880 | 0.807339 | 5.305563e-50 | -8.615850e-47 |
Msa0020390 | Msa1428880 | 0.800268 | 1.560766e-48 | -8.615850e-47 |
Msa0025730 | Msa1428880 | 0.811557 | 6.596078e-51 | -8.615850e-47 |
Msa0029260 | Msa1428880 | 0.827055 | 1.932829e-54 | -8.615850e-47 |
Msa0029630 | Msa1428880 | 0.807142 | 5.840354e-50 | -8.615850e-47 |
Msa0030300 | Msa1428880 | 0.808956 | 2.400094e-50 | -8.615850e-47 |
Msa0033110 | Msa1428880 | 0.848673 | 5.275281e-60 | -8.615850e-47 |
Msa0033260 | Msa1428880 | 0.844244 | 8.522358e-59 | -8.615850e-47 |
Msa0036540 | Msa1428880 | 0.801905 | 7.221304e-49 | -8.615850e-47 |
Msa0037250 | Msa1428880 | 0.817104 | 3.921300e-52 | -8.615850e-47 |
Msa0043660 | Msa1428880 | 0.803928 | 2.757687e-49 | -8.615850e-47 |
Msa0047160 | Msa1428880 | 0.816638 | 4.989041e-52 | -8.615850e-47 |
Msa0055180 | Msa1428880 | 0.802834 | 4.648346e-49 | -8.615850e-47 |
Msa0056470 | Msa1428880 | 0.843266 | 1.557028e-58 | -8.615850e-47 |
Msa0059040 | Msa1428880 | 0.814005 | 1.919773e-51 | -8.615850e-47 |
Msa0059110 | Msa1428880 | 0.818225 | 2.190934e-52 | -8.615850e-47 |
Msa0059950 | Msa1428880 | 0.808204 | 3.474087e-50 | -8.615850e-47 |
Msa0072420 | Msa1428880 | 0.854093 | 1.547945e-61 | -8.615850e-47 |
Msa0075500 | Msa1428880 | 0.812366 | 4.396466e-51 | -8.615850e-47 |
Msa0090360 | Msa1428880 | 0.832117 | 1.135047e-55 | -8.615850e-47 |
Msa0090520 | Msa1428880 | 0.842284 | 2.840963e-58 | -8.615850e-47 |
Msa0091410 | Msa1428880 | 0.848308 | 6.658096e-60 | -8.615850e-47 |
Msa0093010 | Msa1428880 | 0.800140 | 1.657281e-48 | -8.615850e-47 |
Msa0094470 | Msa1428880 | 0.822803 | 1.948719e-53 | -8.615850e-47 |
Msa0095360 | Msa1428880 | 0.805562 | 1.257349e-49 | -8.615850e-47 |
Msa0100740 | Msa1428880 | 0.831453 | 1.655457e-55 | -8.615850e-47 |
Msa0115990 | Msa1428880 | 0.807752 | 4.335104e-50 | -8.615850e-47 |
Msa1351540 | Msa1428880 | 0.831980 | 1.227089e-55 | -8.615850e-47 |
Msa1356440 | Msa1428880 | 0.803837 | 2.880491e-49 | -8.615850e-47 |
Msa1358250 | Msa1428880 | 0.813756 | 2.179066e-51 | -8.615850e-47 |
Msa1364210 | Msa1428880 | 0.828538 | 8.505674e-55 | -8.615850e-47 |
Msa1386780 | Msa1428880 | 0.811721 | 6.077298e-51 | -8.615850e-47 |
Msa1388860 | Msa1428880 | 0.807837 | 4.158429e-50 | -8.615850e-47 |
Msa1389510 | Msa1428880 | 0.806864 | 6.686445e-50 | -8.615850e-47 |
Msa1391410 | Msa1428880 | 0.818824 | 1.602161e-52 | -8.615850e-47 |
Msa1392780 | Msa1428880 | 0.812567 | 3.973264e-51 | -8.615850e-47 |
Msa1394290 | Msa1428880 | 0.818625 | 1.778038e-52 | -8.615850e-47 |
Msa1396400 | Msa1428880 | -0.801099 | 1.056374e-48 | -8.615850e-47 |
Msa1400580 | Msa1428880 | 0.804108 | 2.530272e-49 | -8.615850e-47 |
Msa1402420 | Msa1428880 | -0.810252 | 1.264005e-50 | -8.615850e-47 |
Msa1403340 | Msa1428880 | 0.809231 | 2.096140e-50 | -8.615850e-47 |
Msa1407190 | Msa1428880 | 0.804257 | 2.355699e-49 | -8.615850e-47 |
Msa1419870 | Msa1428880 | 0.879869 | 8.761771e-70 | -8.615850e-47 |
Msa1428880 | Msa1432420 | 0.819473 | 1.140491e-52 | -8.615850e-47 |
Msa1428880 | Msa1433390 | 0.838701 | 2.459691e-57 | -8.615850e-47 |
Msa1428880 | Msa1434420 | -0.812102 | 5.018719e-51 | -8.615850e-47 |
Msa1428880 | Msa1436520 | 0.858144 | 1.007940e-62 | -8.615850e-47 |
Msa1428880 | Msa1437860 | 0.826719 | 2.324899e-54 | -8.615850e-47 |
Msa1428880 | Msa1451560 | 0.812076 | 5.084827e-51 | -8.615850e-47 |
Msa1428880 | Msa1454680 | 0.832293 | 1.026579e-55 | -8.615850e-47 |
Msa1428880 | Msa1456050 | 0.803759 | 2.990488e-49 | -8.615850e-47 |
Msa1428880 | Msa1457920 | 0.844315 | 8.159888e-59 | -8.615850e-47 |
Msa1428880 | Msa1458810 | 0.835662 | 1.472408e-56 | -8.615850e-47 |
Msa1428880 | Msa1461280 | 0.810824 | 9.510317e-51 | -8.615850e-47 |
Msa0603570 | Msa1428880 | 0.821175 | 4.643313e-53 | -8.615850e-47 |
Msa0618930 | Msa1428880 | 0.816202 | 6.244436e-52 | -8.615850e-47 |
Msa0623790 | Msa1428880 | 0.814140 | 1.793263e-51 | -8.615850e-47 |
Msa0631350 | Msa1428880 | 0.802569 | 5.271452e-49 | -8.615850e-47 |
Msa0634890 | Msa1428880 | 0.865684 | 4.938939e-65 | -8.615850e-47 |
Msa0642970 | Msa1428880 | 0.827923 | 1.196364e-54 | -8.615850e-47 |
Msa0643560 | Msa1428880 | 0.811131 | 8.159726e-51 | -8.615850e-47 |
Msa0647500 | Msa1428880 | 0.850403 | 1.737316e-60 | -8.615850e-47 |
Msa0649490 | Msa1428880 | 0.806308 | 8.759594e-50 | -8.615850e-47 |
Msa0650050 | Msa1428880 | -0.803763 | 2.984193e-49 | -8.615850e-47 |
Msa0661300 | Msa1428880 | 0.860259 | 2.340337e-63 | -8.615850e-47 |
Msa0666270 | Msa1428880 | 0.821533 | 3.838388e-53 | -8.615850e-47 |
Msa0673630 | Msa1428880 | 0.825252 | 5.187398e-54 | -8.615850e-47 |
Msa0682680 | Msa1428880 | 0.805626 | 1.219297e-49 | -8.615850e-47 |
Msa0689260 | Msa1428880 | 0.815338 | 9.732443e-52 | -8.615850e-47 |
Msa0691290 | Msa1428880 | 0.815542 | 8.766924e-52 | -8.615850e-47 |
Msa0692940 | Msa1428880 | 0.801904 | 7.223455e-49 | -8.615850e-47 |
Msa0697940 | Msa1428880 | 0.806326 | 8.686382e-50 | -8.615850e-47 |
Msa0698780 | Msa1428880 | 0.809837 | 1.553557e-50 | -8.615850e-47 |
Msa0698800 | Msa1428880 | 0.829520 | 4.915598e-55 | -8.615850e-47 |
Msa0702700 | Msa1428880 | 0.817417 | 3.333326e-52 | -8.615850e-47 |
Msa0711780 | Msa1428880 | 0.836007 | 1.204273e-56 | -8.615850e-47 |
Msa0719180 | Msa1428880 | 0.817876 | 2.626869e-52 | -8.615850e-47 |
Msa0722020 | Msa1428880 | 0.809705 | 1.658482e-50 | -8.615850e-47 |
Msa0741440 | Msa1428880 | 0.820747 | 5.824371e-53 | -8.615850e-47 |
Msa0748170 | Msa1428880 | 0.919965 | 2.325237e-87 | -8.615850e-47 |
Msa0753140 | Msa1428880 | 0.824999 | 5.952259e-54 | -8.615850e-47 |
Msa0763330 | Msa1428880 | 0.800316 | 1.526326e-48 | -8.615850e-47 |
Msa0772480 | Msa1428880 | 0.810184 | 1.307636e-50 | -8.615850e-47 |
Msa0786270 | Msa1428880 | 0.822390 | 2.430970e-53 | -8.615850e-47 |
Msa0788850 | Msa1428880 | 0.843971 | 1.009204e-58 | -8.615850e-47 |
Msa0794670 | Msa1428880 | 0.844977 | 5.410175e-59 | -8.615850e-47 |
Msa0798440 | Msa1428880 | 0.825447 | 4.663937e-54 | -8.615850e-47 |
Msa0800370 | Msa1428880 | 0.845535 | 3.823455e-59 | -8.615850e-47 |
Msa0801110 | Msa1428880 | 0.808316 | 3.288742e-50 | -8.615850e-47 |
Msa0819060 | Msa1428880 | 0.813603 | 2.354680e-51 | -8.615850e-47 |
Msa0822310 | Msa1428880 | -0.802217 | 6.230522e-49 | -8.615850e-47 |
Msa0823090 | Msa1428880 | 0.811408 | 7.105586e-51 | -8.615850e-47 |
Msa0827280 | Msa1428880 | 0.819730 | 9.960781e-53 | -8.615850e-47 |
Msa0830540 | Msa1428880 | 0.862762 | 4.027078e-64 | -8.615850e-47 |
Msa0833190 | Msa1428880 | -0.805832 | 1.103398e-49 | -8.615850e-47 |
Msa0125450 | Msa1428880 | 0.814158 | 1.776733e-51 | -8.615850e-47 |
Msa0125540 | Msa1428880 | 0.823757 | 1.166533e-53 | -8.615850e-47 |
Msa0128860 | Msa1428880 | 0.800436 | 1.442457e-48 | -8.615850e-47 |
Msa0137840 | Msa1428880 | 0.827908 | 1.206422e-54 | -8.615850e-47 |
Msa0137990 | Msa1428880 | 0.842279 | 2.848612e-58 | -8.615850e-47 |
Msa0140110 | Msa1428880 | 0.803913 | 2.777761e-49 | -8.615850e-47 |
Msa0140650 | Msa1428880 | 0.801401 | 9.161266e-49 | -8.615850e-47 |
Msa0140820 | Msa1428880 | 0.825602 | 4.285704e-54 | -8.615850e-47 |
Msa0150300 | Msa1428880 | 0.856404 | 3.290927e-62 | -8.615850e-47 |
Msa0159170 | Msa1428880 | 0.823687 | 1.211179e-53 | -8.615850e-47 |
Msa0162130 | Msa1428880 | 0.800616 | 1.325767e-48 | -8.615850e-47 |
Msa0169300 | Msa1428880 | 0.829652 | 4.567406e-55 | -8.615850e-47 |
Msa0183900 | Msa1428880 | 0.831163 | 1.950100e-55 | -8.615850e-47 |
Msa0184040 | Msa1428880 | 0.836496 | 9.047414e-57 | -8.615850e-47 |
Msa0184780 | Msa1428880 | 0.801982 | 6.963081e-49 | -8.615850e-47 |
Msa0189300 | Msa1428880 | 0.825998 | 3.452078e-54 | -8.615850e-47 |
Msa0189520 | Msa1428880 | 0.837954 | 3.830794e-57 | -8.615850e-47 |
Msa0190120 | Msa1428880 | 0.802313 | 5.952388e-49 | -8.615850e-47 |
Msa0202410 | Msa1428880 | 0.802207 | 6.260339e-49 | -8.615850e-47 |
Msa0204960 | Msa1428880 | 0.812272 | 4.607858e-51 | -8.615850e-47 |
Msa0207670 | Msa1428880 | 0.831604 | 1.519479e-55 | -8.615850e-47 |
Msa0207700 | Msa1428880 | 0.821372 | 4.181866e-53 | -8.615850e-47 |
Msa0209350 | Msa1428880 | 0.846629 | 1.926863e-59 | -8.615850e-47 |
Msa0209500 | Msa1428880 | 0.831996 | 1.215895e-55 | -8.615850e-47 |
Msa0228070 | Msa1428880 | 0.800797 | 1.217810e-48 | -8.615850e-47 |
Msa0229170 | Msa1428880 | 0.820319 | 7.303369e-53 | -8.615850e-47 |
Msa0231660 | Msa1428880 | 0.808617 | 2.836735e-50 | -8.615850e-47 |
Msa0231980 | Msa1428880 | 0.831696 | 1.441883e-55 | -8.615850e-47 |
Msa0232050 | Msa1428880 | 0.815437 | 9.250941e-52 | -8.615850e-47 |
Msa1237940 | Msa1428880 | 0.806798 | 6.905195e-50 | -8.615850e-47 |
Msa1243740 | Msa1428880 | -0.802520 | 5.395184e-49 | -8.615850e-47 |
Msa1244600 | Msa1428880 | 0.804055 | 2.595986e-49 | -8.615850e-47 |
Msa1254730 | Msa1428880 | 0.829464 | 5.072629e-55 | -8.615850e-47 |
Msa1259060 | Msa1428880 | 0.804642 | 1.958696e-49 | -8.615850e-47 |
Msa1264210 | Msa1428880 | 0.819123 | 1.370385e-52 | -8.615850e-47 |
Msa1265630 | Msa1428880 | 0.820339 | 7.229085e-53 | -8.615850e-47 |
Msa1294120 | Msa1428880 | 0.801449 | 8.958405e-49 | -8.615850e-47 |
Msa1294820 | Msa1428880 | 0.813484 | 2.501066e-51 | -8.615850e-47 |
Msa1296830 | Msa1428880 | 0.823679 | 1.216290e-53 | -8.615850e-47 |
Msa1305660 | Msa1428880 | 0.804119 | 2.517724e-49 | -8.615850e-47 |
Msa1307180 | Msa1428880 | 0.808350 | 3.234308e-50 | -8.615850e-47 |
Msa1316360 | Msa1428880 | 0.815224 | 1.031567e-51 | -8.615850e-47 |
Msa1331320 | Msa1428880 | 0.804637 | 1.962849e-49 | -8.615850e-47 |
Msa1332590 | Msa1428880 | 0.829135 | 6.098097e-55 | -8.615850e-47 |
Msa1336560 | Msa1428880 | 0.847105 | 1.427565e-59 | -8.615850e-47 |
Msa1341060 | Msa1428880 | 0.843560 | 1.299508e-58 | -8.615850e-47 |
Msa1343290 | Msa1428880 | 0.811581 | 6.515913e-51 | -8.615850e-47 |
Msa0365700 | Msa1428880 | 0.852828 | 3.572377e-61 | -8.615850e-47 |
Msa0366890 | Msa1428880 | 0.841899 | 3.592223e-58 | -8.615850e-47 |
Msa0376300 | Msa1428880 | 0.818233 | 2.180891e-52 | -8.615850e-47 |
Msa0376310 | Msa1428880 | 0.822805 | 1.945930e-53 | -8.615850e-47 |
Msa0380100 | Msa1428880 | 0.813748 | 2.187131e-51 | -8.615850e-47 |
Msa0380300 | Msa1428880 | 0.807117 | 5.910703e-50 | -8.615850e-47 |
Msa0385490 | Msa1428880 | 0.808893 | 2.475728e-50 | -8.615850e-47 |
Msa0385500 | Msa1428880 | 0.816994 | 4.150008e-52 | -8.615850e-47 |
Msa0385580 | Msa1428880 | 0.805904 | 1.065875e-49 | -8.615850e-47 |
Msa0388700 | Msa1428880 | 0.865496 | 5.661513e-65 | -8.615850e-47 |
Msa0397540 | Msa1428880 | 0.803818 | 2.907891e-49 | -8.615850e-47 |
Msa0398670 | Msa1428880 | 0.812943 | 3.287120e-51 | -8.615850e-47 |
Msa0413530 | Msa1428880 | 0.830162 | 3.430581e-55 | -8.615850e-47 |
Msa0414800 | Msa1428880 | 0.828316 | 9.620761e-55 | -8.615850e-47 |
Msa0415430 | Msa1428880 | 0.800974 | 1.120224e-48 | -8.615850e-47 |
Msa0422400 | Msa1428880 | 0.803347 | 3.640400e-49 | -8.615850e-47 |
Msa0457510 | Msa1428880 | 0.803199 | 3.907681e-49 | -8.615850e-47 |
Msa0458060 | Msa1428880 | 0.811510 | 6.752122e-51 | -8.615850e-47 |
Msa0465550 | Msa1428880 | 0.814607 | 1.413725e-51 | -8.615850e-47 |
Msa0471440 | Msa1428880 | 0.829618 | 4.652983e-55 | -8.615850e-47 |
Msa0482130 | Msa1428880 | 0.862087 | 6.496864e-64 | -8.615850e-47 |
Msa0980540 | Msa1428880 | 0.812529 | 4.049250e-51 | -8.615850e-47 |
Msa0987370 | Msa1428880 | 0.837127 | 6.245176e-57 | -8.615850e-47 |
Msa0989540 | Msa1428880 | 0.840529 | 8.233516e-58 | -8.615850e-47 |
Msa1006840 | Msa1428880 | 0.803661 | 3.133301e-49 | -8.615850e-47 |
Msa1019240 | Msa1428880 | 0.800726 | 1.259203e-48 | -8.615850e-47 |
Msa1019260 | Msa1428880 | 0.806217 | 9.154981e-50 | -8.615850e-47 |
Msa1039900 | Msa1428880 | 0.811494 | 6.807657e-51 | -8.615850e-47 |
Msa1077030 | Msa1428880 | 0.813712 | 2.228433e-51 | -8.615850e-47 |
Msa1081930 | Msa1428880 | 0.865878 | 4.289247e-65 | -8.615850e-47 |
Msa1089320 | Msa1428880 | 0.829215 | 5.832331e-55 | -8.615850e-47 |
Msa1091100 | Msa1428880 | 0.801420 | 9.082705e-49 | -8.615850e-47 |
Msa1091940 | Msa1428880 | 0.809546 | 1.794061e-50 | -8.615850e-47 |
Msa1100240 | Msa1428880 | -0.808587 | 2.878183e-50 | -8.615850e-47 |
Msa1104140 | Msa1428880 | 0.809008 | 2.339782e-50 | -8.615850e-47 |
Msa1104210 | Msa1428880 | 0.805770 | 1.137183e-49 | -8.615850e-47 |
Msa0241390 | Msa1428880 | 0.812526 | 4.055391e-51 | -8.615850e-47 |
Msa0244980 | Msa1428880 | 0.800504 | 1.397324e-48 | -8.615850e-47 |
Msa0245430 | Msa1428880 | 0.814582 | 1.431992e-51 | -8.615850e-47 |
Msa0271890 | Msa1428880 | 0.812058 | 5.131019e-51 | -8.615850e-47 |
Msa0275360 | Msa1428880 | 0.817086 | 3.958148e-52 | -8.615850e-47 |
Msa0279240 | Msa1428880 | 0.803426 | 3.505810e-49 | -8.615850e-47 |
Msa0281530 | Msa1428880 | 0.821699 | 3.513380e-53 | -8.615850e-47 |
Msa0285330 | Msa1428880 | 0.813646 | 2.303212e-51 | -8.615850e-47 |
Msa0309880 | Msa1428880 | 0.800448 | 1.434153e-48 | -8.615850e-47 |
Msa0310030 | Msa1428880 | 0.811381 | 7.202438e-51 | -8.615850e-47 |
Msa0310860 | Msa1428880 | 0.809215 | 2.112491e-50 | -8.615850e-47 |
Msa0317910 | Msa1428880 | 0.805917 | 1.058837e-49 | -8.615850e-47 |
Msa0320590 | Msa1428880 | 0.802838 | 4.638612e-49 | -8.615850e-47 |
Msa0322240 | Msa1428880 | 0.805165 | 1.522632e-49 | -8.615850e-47 |
Msa0341780 | Msa1428880 | -0.804619 | 1.980747e-49 | -8.615850e-47 |
Msa0351990 | Msa1428880 | 0.802001 | 6.900259e-49 | -8.615850e-47 |
Msa0357900 | Msa1428880 | 0.826432 | 2.722013e-54 | -8.615850e-47 |
Msa0363640 | Msa1428880 | 0.803449 | 3.467465e-49 | -8.615850e-47 |
Msa1109680 | Msa1428880 | 0.822346 | 2.487660e-53 | -8.615850e-47 |
Msa1126830 | Msa1428880 | 0.881990 | 1.515005e-70 | -8.615850e-47 |
Msa1128280 | Msa1428880 | 0.800738 | 1.252144e-48 | -8.615850e-47 |
Msa1133230 | Msa1428880 | 0.824301 | 8.694053e-54 | -8.615850e-47 |
Msa1133250 | Msa1428880 | 0.817502 | 3.189545e-52 | -8.615850e-47 |
Msa1158640 | Msa1428880 | -0.821895 | 3.165260e-53 | -8.615850e-47 |
Msa1160590 | Msa1428880 | 0.875746 | 2.415556e-68 | -8.615850e-47 |
Msa1165270 | Msa1428880 | 0.806104 | 9.672124e-50 | -8.615850e-47 |
Msa1165780 | Msa1428880 | 0.866907 | 2.022155e-65 | -8.615850e-47 |
Msa1165940 | Msa1428880 | 0.878466 | 2.744430e-69 | -8.615850e-47 |
Msa1166090 | Msa1428880 | -0.800231 | 1.588363e-48 | -8.615850e-47 |
Msa1178060 | Msa1428880 | 0.811576 | 6.534423e-51 | -8.615850e-47 |
Msa1181250 | Msa1428880 | 0.817882 | 2.618331e-52 | -8.615850e-47 |
Msa1181330 | Msa1428880 | 0.812608 | 3.892210e-51 | -8.615850e-47 |
Msa1207270 | Msa1428880 | 0.808148 | 3.570454e-50 | -8.615850e-47 |
Msa1209200 | Msa1428880 | 0.853233 | 2.736589e-61 | -8.615850e-47 |
Msa1209260 | Msa1428880 | 0.844832 | 5.922421e-59 | -8.615850e-47 |
Msa1209760 | Msa1428880 | 0.824676 | 7.094918e-54 | -8.615850e-47 |
Msa1218500 | Msa1428880 | 0.812068 | 5.106747e-51 | -8.615850e-47 |
Msa0493410 | Msa1428880 | 0.807126 | 5.887231e-50 | -8.615850e-47 |
Msa0502090 | Msa1428880 | 0.828240 | 1.003300e-54 | -8.615850e-47 |
Msa0512340 | Msa1428880 | 0.800367 | 1.489821e-48 | -8.615850e-47 |
Msa0521050 | Msa1428880 | 0.822120 | 2.807130e-53 | -8.615850e-47 |
Msa0539410 | Msa1428880 | 0.857345 | 1.739333e-62 | -8.615850e-47 |
Msa0542090 | Msa1428880 | 0.803250 | 3.812684e-49 | -8.615850e-47 |
Msa0542130 | Msa1428880 | 0.806409 | 8.342904e-50 | -8.615850e-47 |
Msa0544840 | Msa1428880 | 0.819762 | 9.793920e-53 | -8.615850e-47 |
Msa0547160 | Msa1428880 | 0.812597 | 3.914185e-51 | -8.615850e-47 |
Msa0548240 | Msa1428880 | 0.840634 | 7.726046e-58 | -8.615850e-47 |
Msa0555450 | Msa1428880 | 0.824787 | 6.679894e-54 | -8.615850e-47 |
Msa0556060 | Msa1428880 | 0.814753 | 1.312230e-51 | -8.615850e-47 |
Msa0581110 | Msa1428880 | 0.882206 | 1.265405e-70 | -8.615850e-47 |
Msa0581280 | Msa1428880 | 0.848034 | 7.927140e-60 | -8.615850e-47 |
Msa0588260 | Msa1428880 | 0.828502 | 8.674118e-55 | -8.615850e-47 |
Msa0589190 | Msa1428880 | 0.815484 | 9.027941e-52 | -8.615850e-47 |
Msa0595170 | Msa1428880 | 0.837074 | 6.441793e-57 | -8.615850e-47 |
Msa0601150 | Msa1428880 | 0.813471 | 2.517459e-51 | -8.615850e-47 |
Msa0865030 | Msa1428880 | 0.812241 | 4.681350e-51 | -8.615850e-47 |
Msa0867520 | Msa1428880 | -0.808741 | 2.667818e-50 | -8.615850e-47 |
Msa0881270 | Msa1428880 | 0.810903 | 9.143353e-51 | -8.615850e-47 |
Msa0887250 | Msa1428880 | 0.833260 | 5.906036e-56 | -8.615850e-47 |
Msa0932570 | Msa1428880 | 0.830795 | 2.401100e-55 | -8.615850e-47 |
Msa0958000 | Msa1428880 | 0.821534 | 3.837102e-53 | -8.615850e-47 |
Msa0970030 | Msa1428880 | 0.810298 | 1.235494e-50 | -8.615850e-47 |
Msa0970530 | Msa1428880 | 0.822092 | 2.850310e-53 | -8.615850e-47 |
Msa0970600 | Msa1428880 | 0.841064 | 5.961027e-58 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1428880 | MtrunA17_Chr5g0446311 | 99.340 | 303 | 2 | 0 | 1 | 303 | 1 | 303 | 0.0 | 601 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1428880 | AT3G18790.1 | 76.238 | 303 | 69 | 2 | 1 | 303 | 1 | 300 | 1.91e-149 | 421 |
Find 100 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGCTGCTTATTATGGTTAT+AGG | 0.163690 | tig0026416:-15926 | Msa1428880:CDS |
AGGATTAATGCTGCTTATTA+TGG | 0.220615 | tig0026416:-15933 | Msa1428880:CDS |
AGAAAAGGACGGCGTTCTTT+AGG | 0.280108 | tig0026416:+16338 | None:intergenic |
TGCTGCTTATTATGGTTATA+GGG | 0.299741 | tig0026416:-15925 | Msa1428880:CDS |
GGATGATGAAGATGGGATAT+TGG | 0.324169 | tig0026416:-15904 | Msa1428880:CDS |
GGGCCGGGGTATAGATATTT+TGG | 0.329847 | tig0026416:-16044 | Msa1428880:CDS |
GAGGGAGATGAGGGAGAGGT+TGG | 0.336839 | tig0026416:-15691 | Msa1428880:CDS |
TTCGTTGAGGTCACGGCATT+CGG | 0.348118 | tig0026416:+16310 | None:intergenic |
GCAGAATGCCTCGCATAATT+CGG | 0.368301 | tig0026416:+16122 | None:intergenic |
GTATGTCAGTGATGAGCTTA+TGG | 0.373343 | tig0026416:-15568 | Msa1428880:CDS |
GAGAGGAGAATTGTTGAGCT+TGG | 0.400059 | tig0026416:-16149 | Msa1428880:CDS |
GGGAGAGGTTGGATAGGATA+AGG | 0.401870 | tig0026416:-15827 | Msa1428880:CDS |
TTCTCAATCTCTTTCTCATC+CGG | 0.403897 | tig0026416:+15630 | None:intergenic |
CAGCAAATCATGCGCGAAAT+CGG | 0.407567 | tig0026416:-16272 | Msa1428880:CDS |
GATTTGCTGACGCCATTTGT+CGG | 0.414253 | tig0026416:+16286 | None:intergenic |
TGTTGTGCATGTGCCATTGC+CGG | 0.419890 | tig0026416:-15649 | Msa1428880:CDS |
ATTGGAGCGGGTTGAGGCAC+CGG | 0.422542 | tig0026416:-15886 | Msa1428880:CDS |
TGAGAAAGAGATTGAGAAGA+TGG | 0.425940 | tig0026416:-15625 | Msa1428880:CDS |
TTCTGCGAAAATGACTGATT+TGG | 0.430591 | tig0026416:-16105 | Msa1428880:CDS |
AGCCGCCAGAGTTGAGGAAA+CGG | 0.430737 | tig0026416:-15980 | Msa1428880:CDS |
AGAGGTTGGATGAGAAAGAA+AGG | 0.431855 | tig0026416:-15677 | Msa1428880:CDS |
GATGAAGGAGAGGGAGATGA+GGG | 0.439819 | tig0026416:-15700 | Msa1428880:CDS |
GGTTGAGGAGTGGGAGAGGT+TGG | 0.442822 | tig0026416:-15838 | Msa1428880:CDS |
TATGAGGCGGGAGGCGGTTG+AGG | 0.445034 | tig0026416:-15853 | Msa1428880:CDS |
GCGGGAGGCGGTTGAGGAGT+GGG | 0.448024 | tig0026416:-15847 | Msa1428880:CDS |
GGAGGAAGAGGATGTGGTGG+AGG | 0.450447 | tig0026416:-15730 | Msa1428880:CDS |
AGGATGTGGTGGAGGAAGAG+AGG | 0.451153 | tig0026416:-15722 | Msa1428880:CDS |
AGGAAGAGAGGATGAAGGAG+AGG | 0.452014 | tig0026416:-15710 | Msa1428880:CDS |
TCTGAATCTCGGCGACTTTG+CGG | 0.453679 | tig0026416:+16249 | None:intergenic |
CGAGATATGATATTTATAAG+AGG | 0.453995 | tig0026416:-15953 | Msa1428880:CDS |
GCGGGTTGAGGCACCGGCTG+AGG | 0.458475 | tig0026416:-15880 | Msa1428880:CDS |
CTAGGAAGGCTGTGAGGAGT+GGG | 0.459243 | tig0026416:-15797 | Msa1428880:CDS |
ACCTCAACGAAGCCGACAAA+TGG | 0.465609 | tig0026416:-16298 | Msa1428880:CDS |
GGATGAAGGAGAGGGAGATG+AGG | 0.468850 | tig0026416:-15701 | Msa1428880:CDS |
ATAGGATAAGGAAGGAAGCT+AGG | 0.470791 | tig0026416:-15815 | Msa1428880:CDS |
AGGAGAGGGAGATGAGGGAG+AGG | 0.482030 | tig0026416:-15695 | Msa1428880:CDS |
GAGGAGTGGGGAGGTTGTTG+AGG | 0.482912 | tig0026416:-15784 | Msa1428880:CDS |
TGTCGGCTTCGTTGAGGTCA+CGG | 0.485850 | tig0026416:+16303 | None:intergenic |
TGGGATATTGGAGCGGGTTG+AGG | 0.487195 | tig0026416:-15892 | Msa1428880:CDS |
CGCCTCATACATTCCTCAGC+CGG | 0.489139 | tig0026416:+15867 | None:intergenic |
AGGCGGTTGAGGAGTGGGAG+AGG | 0.491691 | tig0026416:-15842 | Msa1428880:CDS |
TAATTTCGTCGTTGAGATCA+CGG | 0.493082 | tig0026416:+16201 | None:intergenic |
GGTTATAGGGATGATGAAGA+TGG | 0.495151 | tig0026416:-15912 | Msa1428880:CDS |
TGGTGCGGCGAAGAAATTGC+CGG | 0.497574 | tig0026416:-16024 | Msa1428880:CDS |
AGGAGTGGGAGAGGTTGGAT+AGG | 0.498229 | tig0026416:-15833 | Msa1428880:CDS |
GGTGCGGCGAAGAAATTGCC+GGG | 0.501210 | tig0026416:-16023 | Msa1428880:CDS |
ATCTCTTTCTCATCCGGCAA+TGG | 0.505971 | tig0026416:+15636 | None:intergenic |
AGAAGACGGATTTGTTGAAT+CGG | 0.512072 | tig0026416:-15590 | Msa1428880:CDS |
CGGCATTCGGAAGCGAGAAA+AGG | 0.513747 | tig0026416:+16323 | None:intergenic |
GGTGGAGGAAGAGAGGATGA+AGG | 0.519325 | tig0026416:-15715 | Msa1428880:CDS |
TGAGGAGGAAGAGGATGTGG+TGG | 0.519928 | tig0026416:-15733 | Msa1428880:CDS |
GGAAGAGAGGATGAAGGAGA+GGG | 0.524110 | tig0026416:-15709 | Msa1428880:CDS |
ATGAAGATGGGATATTGGAG+CGG | 0.526437 | tig0026416:-15899 | Msa1428880:CDS |
GTTCCTAACCCTAGTGGAAG+GGG | 0.527308 | tig0026416:-16065 | Msa1428880:CDS |
GGCGGGAGGCGGTTGAGGAG+TGG | 0.530068 | tig0026416:-15848 | Msa1428880:CDS |
GTCCTCCGTTTCCTCAACTC+TGG | 0.530903 | tig0026416:+15975 | None:intergenic |
GAGATTCAGAACGAAGGTCT+CGG | 0.533692 | tig0026416:-16236 | Msa1428880:CDS |
GATAAGGAAGGAAGCTAGGA+AGG | 0.534959 | tig0026416:-15811 | Msa1428880:CDS |
GATACTTCATGAGGAGGAAG+AGG | 0.539895 | tig0026416:-15742 | Msa1428880:CDS |
GCGAAAATGACTGATTTGGA+TGG | 0.540673 | tig0026416:-16101 | Msa1428880:CDS |
TTGAGGTTACTGCGGCTACG+AGG | 0.542022 | tig0026416:-15767 | Msa1428880:CDS |
GCTAGGAAGGCTGTGAGGAG+TGG | 0.544777 | tig0026416:-15798 | Msa1428880:CDS |
CACCGGCTGAGGAATGTATG+AGG | 0.544927 | tig0026416:-15869 | Msa1428880:CDS |
TTGAGAAGCCGCCAGAGTTG+AGG | 0.545601 | tig0026416:-15986 | Msa1428880:CDS |
TCATGAGGAGGAAGAGGATG+TGG | 0.548901 | tig0026416:-15736 | Msa1428880:CDS |
GGCTGAGGAATGTATGAGGC+GGG | 0.550661 | tig0026416:-15865 | Msa1428880:CDS |
GTTATAGGGATGATGAAGAT+GGG | 0.553326 | tig0026416:-15911 | Msa1428880:CDS |
GAGGTTGGATAGGATAAGGA+AGG | 0.556697 | tig0026416:-15823 | Msa1428880:CDS |
ATGTTCCTAACCCTAGTGGA+AGG | 0.561136 | tig0026416:-16067 | Msa1428880:CDS |
GAGGTTGGATGAGAAAGAAA+GGG | 0.566400 | tig0026416:-15676 | Msa1428880:CDS |
GGAATGTATGAGGCGGGAGG+CGG | 0.568894 | tig0026416:-15859 | Msa1428880:CDS |
AGGAGAATTGTTGAGCTTGG+AGG | 0.570345 | tig0026416:-16146 | Msa1428880:CDS |
GCCATTTGTCGGCTTCGTTG+AGG | 0.579484 | tig0026416:+16297 | None:intergenic |
GGAGGAGCAGACTGAAGCTA+AGG | 0.586889 | tig0026416:-15547 | Msa1428880:CDS |
TGAAGATGGGATATTGGAGC+GGG | 0.592242 | tig0026416:-15898 | Msa1428880:CDS |
GAGACCTTCGTTCTGAATCT+CGG | 0.596536 | tig0026416:+16238 | None:intergenic |
GTTGATGTTCCTAACCCTAG+TGG | 0.600173 | tig0026416:-16071 | Msa1428880:CDS |
TGTTCCTAACCCTAGTGGAA+GGG | 0.609021 | tig0026416:-16066 | Msa1428880:CDS |
TAGGAAGGCTGTGAGGAGTG+GGG | 0.611922 | tig0026416:-15796 | Msa1428880:CDS |
CGAAAATGACTGATTTGGAT+GGG | 0.613601 | tig0026416:-16100 | Msa1428880:CDS |
CGGCTGAGGAATGTATGAGG+CGG | 0.623295 | tig0026416:-15866 | Msa1428880:CDS |
TGAGGTTACTGCGGCTACGA+GGG | 0.625438 | tig0026416:-15766 | Msa1428880:CDS |
CTCCGTTTCCTCAACTCTGG+CGG | 0.627535 | tig0026416:+15978 | None:intergenic |
GTGCGGCGAAGAAATTGCCG+GGG | 0.629933 | tig0026416:-16022 | Msa1428880:CDS |
ATTCGGAAGCGAGAAAAGGA+CGG | 0.632653 | tig0026416:+16327 | None:intergenic |
CGTCGTTGAGATCACGGAGA+CGG | 0.644808 | tig0026416:+16207 | None:intergenic |
GAAGGCTGTGAGGAGTGGGG+AGG | 0.648471 | tig0026416:-15793 | Msa1428880:CDS |
GAGGGAGATACTTCATGAGG+AGG | 0.648473 | tig0026416:-15748 | Msa1428880:CDS |
GCACCAAAATATCTATACCC+CGG | 0.652148 | tig0026416:+16041 | None:intergenic |
GGTGTTGCAGAAGAAGAAGA+CGG | 0.654804 | tig0026416:-15604 | Msa1428880:CDS |
TTCCTAACCCTAGTGGAAGG+GGG | 0.659153 | tig0026416:-16064 | Msa1428880:CDS |
TACGAGGGAGATACTTCATG+AGG | 0.667838 | tig0026416:-15751 | Msa1428880:CDS |
TGAGGAATGTATGAGGCGGG+AGG | 0.670206 | tig0026416:-15862 | Msa1428880:CDS |
CGCCAGAGTTGAGGAAACGG+AGG | 0.674224 | tig0026416:-15977 | Msa1428880:CDS |
TGCGGCGAAGAAATTGCCGG+GGG | 0.684263 | tig0026416:-16021 | Msa1428880:CDS |
GTCGCCGAGATTCAGAACGA+AGG | 0.688122 | tig0026416:-16242 | Msa1428880:CDS |
TTGGAGGACCGAATTATGCG+AGG | 0.690784 | tig0026416:-16130 | Msa1428880:CDS |
TGTCAGTGATGAGCTTATGG+AGG | 0.691036 | tig0026416:-15565 | Msa1428880:CDS |
GGAGGTTGTTGAGGTTACTG+CGG | 0.696634 | tig0026416:-15775 | Msa1428880:CDS |
AGGAAGCTAGGAAGGCTGTG+AGG | 0.701271 | tig0026416:-15803 | Msa1428880:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | CGAGATATGATATTTATAAG+AGG | - | tig0026416:15984-16003 | Msa1428880:CDS | 25.0% |
! | CGAGATATGATATTTATAAG+AGG | - | tig0026416:15984-16003 | Msa1428880:CDS | 25.0% |
! | AGGATTAATGCTGCTTATTA+TGG | - | tig0026416:16004-16023 | Msa1428880:CDS | 30.0% |
! | ATGCTGCTTATTATGGTTAT+AGG | - | tig0026416:16011-16030 | Msa1428880:CDS | 30.0% |
! | TGCTGCTTATTATGGTTATA+GGG | - | tig0026416:16012-16031 | Msa1428880:CDS | 30.0% |
! | AGGATTAATGCTGCTTATTA+TGG | - | tig0026416:16004-16023 | Msa1428880:CDS | 30.0% |
! | ATGCTGCTTATTATGGTTAT+AGG | - | tig0026416:16011-16030 | Msa1428880:CDS | 30.0% |
! | TGCTGCTTATTATGGTTATA+GGG | - | tig0026416:16012-16031 | Msa1428880:CDS | 30.0% |
! | CTTCTTTTCTTCAGCTTTCA+TGG | + | tig0026416:15576-15595 | None:intergenic | 35.0% |
TAATTTCGTCGTTGAGATCA+CGG | + | tig0026416:15739-15758 | None:intergenic | 35.0% | |
TCATTCGTGAAAAATCGCAT+TGG | - | tig0026416:15765-15784 | Msa1428880:CDS | 35.0% | |
CATTCGTGAAAAATCGCATT+GGG | - | tig0026416:15766-15785 | Msa1428880:CDS | 35.0% | |
TTCTGCGAAAATGACTGATT+TGG | - | tig0026416:15832-15851 | Msa1428880:CDS | 35.0% | |
!! | CGAAAATGACTGATTTGGAT+GGG | - | tig0026416:15837-15856 | Msa1428880:CDS | 35.0% |
GTTATAGGGATGATGAAGAT+GGG | - | tig0026416:16026-16045 | Msa1428880:CDS | 35.0% | |
TTCTCAATCTCTTTCTCATC+CGG | + | tig0026416:16310-16329 | None:intergenic | 35.0% | |
TGAGAAAGAGATTGAGAAGA+TGG | - | tig0026416:16312-16331 | Msa1428880:CDS | 35.0% | |
!! | AGAAGACGGATTTGTTGAAT+CGG | - | tig0026416:16347-16366 | Msa1428880:CDS | 35.0% |
! | CTTCTTTTCTTCAGCTTTCA+TGG | + | tig0026416:15576-15595 | None:intergenic | 35.0% |
TAATTTCGTCGTTGAGATCA+CGG | + | tig0026416:15739-15758 | None:intergenic | 35.0% | |
TCATTCGTGAAAAATCGCAT+TGG | - | tig0026416:15765-15784 | Msa1428880:CDS | 35.0% | |
CATTCGTGAAAAATCGCATT+GGG | - | tig0026416:15766-15785 | Msa1428880:CDS | 35.0% | |
TTCTGCGAAAATGACTGATT+TGG | - | tig0026416:15832-15851 | Msa1428880:CDS | 35.0% | |
!! | CGAAAATGACTGATTTGGAT+GGG | - | tig0026416:15837-15856 | Msa1428880:CDS | 35.0% |
GTTATAGGGATGATGAAGAT+GGG | - | tig0026416:16026-16045 | Msa1428880:CDS | 35.0% | |
TTCTCAATCTCTTTCTCATC+CGG | + | tig0026416:16310-16329 | None:intergenic | 35.0% | |
TGAGAAAGAGATTGAGAAGA+TGG | - | tig0026416:16312-16331 | Msa1428880:CDS | 35.0% | |
!! | AGAAGACGGATTTGTTGAAT+CGG | - | tig0026416:16347-16366 | Msa1428880:CDS | 35.0% |
!! | GCGAAAATGACTGATTTGGA+TGG | - | tig0026416:15836-15855 | Msa1428880:CDS | 40.0% |
GCACCAAAATATCTATACCC+CGG | + | tig0026416:15899-15918 | None:intergenic | 40.0% | |
!!! | GGGGTATAGATATTTTGGTG+CGG | - | tig0026416:15898-15917 | Msa1428880:CDS | 40.0% |
GGTTATAGGGATGATGAAGA+TGG | - | tig0026416:16025-16044 | Msa1428880:CDS | 40.0% | |
GGATGATGAAGATGGGATAT+TGG | - | tig0026416:16033-16052 | Msa1428880:CDS | 40.0% | |
ATGAAGATGGGATATTGGAG+CGG | - | tig0026416:16038-16057 | Msa1428880:CDS | 40.0% | |
ATAGGATAAGGAAGGAAGCT+AGG | - | tig0026416:16122-16141 | Msa1428880:CDS | 40.0% | |
AGAGGTTGGATGAGAAAGAA+AGG | - | tig0026416:16260-16279 | Msa1428880:CDS | 40.0% | |
GAGGTTGGATGAGAAAGAAA+GGG | - | tig0026416:16261-16280 | Msa1428880:CDS | 40.0% | |
GTATGTCAGTGATGAGCTTA+TGG | - | tig0026416:16369-16388 | Msa1428880:CDS | 40.0% | |
!! | GCGAAAATGACTGATTTGGA+TGG | - | tig0026416:15836-15855 | Msa1428880:CDS | 40.0% |
GCACCAAAATATCTATACCC+CGG | + | tig0026416:15899-15918 | None:intergenic | 40.0% | |
!!! | GGGGTATAGATATTTTGGTG+CGG | - | tig0026416:15898-15917 | Msa1428880:CDS | 40.0% |
GGTTATAGGGATGATGAAGA+TGG | - | tig0026416:16025-16044 | Msa1428880:CDS | 40.0% | |
GGATGATGAAGATGGGATAT+TGG | - | tig0026416:16033-16052 | Msa1428880:CDS | 40.0% | |
ATGAAGATGGGATATTGGAG+CGG | - | tig0026416:16038-16057 | Msa1428880:CDS | 40.0% | |
ATAGGATAAGGAAGGAAGCT+AGG | - | tig0026416:16122-16141 | Msa1428880:CDS | 40.0% | |
AGAGGTTGGATGAGAAAGAA+AGG | - | tig0026416:16260-16279 | Msa1428880:CDS | 40.0% | |
GAGGTTGGATGAGAAAGAAA+GGG | - | tig0026416:16261-16280 | Msa1428880:CDS | 40.0% | |
GTATGTCAGTGATGAGCTTA+TGG | - | tig0026416:16369-16388 | Msa1428880:CDS | 40.0% | |
AGAAAAGGACGGCGTTCTTT+AGG | + | tig0026416:15602-15621 | None:intergenic | 45.0% | |
ATTCGGAAGCGAGAAAAGGA+CGG | + | tig0026416:15613-15632 | None:intergenic | 45.0% | |
!! | GATTTGCTGACGCCATTTGT+CGG | + | tig0026416:15654-15673 | None:intergenic | 45.0% |
CAGCAAATCATGCGCGAAAT+CGG | - | tig0026416:15665-15684 | Msa1428880:CDS | 45.0% | |
! | GAGACCTTCGTTCTGAATCT+CGG | + | tig0026416:15702-15721 | None:intergenic | 45.0% |
GAGATTCAGAACGAAGGTCT+CGG | - | tig0026416:15701-15720 | Msa1428880:CDS | 45.0% | |
GTGAAAAATCGCATTGGGAG+AGG | - | tig0026416:15771-15790 | Msa1428880:CDS | 45.0% | |
GAGAGGAGAATTGTTGAGCT+TGG | - | tig0026416:15788-15807 | Msa1428880:CDS | 45.0% | |
AGGAGAATTGTTGAGCTTGG+AGG | - | tig0026416:15791-15810 | Msa1428880:CDS | 45.0% | |
GCAGAATGCCTCGCATAATT+CGG | + | tig0026416:15818-15837 | None:intergenic | 45.0% | |
GTTGATGTTCCTAACCCTAG+TGG | - | tig0026416:15866-15885 | Msa1428880:CDS | 45.0% | |
ATGTTCCTAACCCTAGTGGA+AGG | - | tig0026416:15870-15889 | Msa1428880:CDS | 45.0% | |
TGTTCCTAACCCTAGTGGAA+GGG | - | tig0026416:15871-15890 | Msa1428880:CDS | 45.0% | |
TGAAGATGGGATATTGGAGC+GGG | - | tig0026416:16039-16058 | Msa1428880:CDS | 45.0% | |
GAGGTTGGATAGGATAAGGA+AGG | - | tig0026416:16114-16133 | Msa1428880:CDS | 45.0% | |
GATAAGGAAGGAAGCTAGGA+AGG | - | tig0026416:16126-16145 | Msa1428880:CDS | 45.0% | |
TACGAGGGAGATACTTCATG+AGG | - | tig0026416:16186-16205 | Msa1428880:CDS | 45.0% | |
GATACTTCATGAGGAGGAAG+AGG | - | tig0026416:16195-16214 | Msa1428880:CDS | 45.0% | |
ATCTCTTTCTCATCCGGCAA+TGG | + | tig0026416:16304-16323 | None:intergenic | 45.0% | |
! | GGTGTTGCAGAAGAAGAAGA+CGG | - | tig0026416:16333-16352 | Msa1428880:CDS | 45.0% |
TGTCAGTGATGAGCTTATGG+AGG | - | tig0026416:16372-16391 | Msa1428880:CDS | 45.0% | |
AGAAAAGGACGGCGTTCTTT+AGG | + | tig0026416:15602-15621 | None:intergenic | 45.0% | |
ATTCGGAAGCGAGAAAAGGA+CGG | + | tig0026416:15613-15632 | None:intergenic | 45.0% | |
!! | GATTTGCTGACGCCATTTGT+CGG | + | tig0026416:15654-15673 | None:intergenic | 45.0% |
CAGCAAATCATGCGCGAAAT+CGG | - | tig0026416:15665-15684 | Msa1428880:CDS | 45.0% | |
! | GAGACCTTCGTTCTGAATCT+CGG | + | tig0026416:15702-15721 | None:intergenic | 45.0% |
GAGATTCAGAACGAAGGTCT+CGG | - | tig0026416:15701-15720 | Msa1428880:CDS | 45.0% | |
GTGAAAAATCGCATTGGGAG+AGG | - | tig0026416:15771-15790 | Msa1428880:CDS | 45.0% | |
GAGAGGAGAATTGTTGAGCT+TGG | - | tig0026416:15788-15807 | Msa1428880:CDS | 45.0% | |
AGGAGAATTGTTGAGCTTGG+AGG | - | tig0026416:15791-15810 | Msa1428880:CDS | 45.0% | |
GCAGAATGCCTCGCATAATT+CGG | + | tig0026416:15818-15837 | None:intergenic | 45.0% | |
GTTGATGTTCCTAACCCTAG+TGG | - | tig0026416:15866-15885 | Msa1428880:CDS | 45.0% | |
ATGTTCCTAACCCTAGTGGA+AGG | - | tig0026416:15870-15889 | Msa1428880:CDS | 45.0% | |
TGTTCCTAACCCTAGTGGAA+GGG | - | tig0026416:15871-15890 | Msa1428880:CDS | 45.0% | |
TGAAGATGGGATATTGGAGC+GGG | - | tig0026416:16039-16058 | Msa1428880:CDS | 45.0% | |
GAGGTTGGATAGGATAAGGA+AGG | - | tig0026416:16114-16133 | Msa1428880:CDS | 45.0% | |
GATAAGGAAGGAAGCTAGGA+AGG | - | tig0026416:16126-16145 | Msa1428880:CDS | 45.0% | |
TACGAGGGAGATACTTCATG+AGG | - | tig0026416:16186-16205 | Msa1428880:CDS | 45.0% | |
GATACTTCATGAGGAGGAAG+AGG | - | tig0026416:16195-16214 | Msa1428880:CDS | 45.0% | |
ATCTCTTTCTCATCCGGCAA+TGG | + | tig0026416:16304-16323 | None:intergenic | 45.0% | |
! | GGTGTTGCAGAAGAAGAAGA+CGG | - | tig0026416:16333-16352 | Msa1428880:CDS | 45.0% |
TGTCAGTGATGAGCTTATGG+AGG | - | tig0026416:16372-16391 | Msa1428880:CDS | 45.0% | |
TTCGTTGAGGTCACGGCATT+CGG | + | tig0026416:15630-15649 | None:intergenic | 50.0% | |
ACCTCAACGAAGCCGACAAA+TGG | - | tig0026416:15639-15658 | Msa1428880:CDS | 50.0% | |
TCTGAATCTCGGCGACTTTG+CGG | + | tig0026416:15691-15710 | None:intergenic | 50.0% | |
TTGGAGGACCGAATTATGCG+AGG | - | tig0026416:15807-15826 | Msa1428880:CDS | 50.0% | |
GTTCCTAACCCTAGTGGAAG+GGG | - | tig0026416:15872-15891 | Msa1428880:CDS | 50.0% | |
TTCCTAACCCTAGTGGAAGG+GGG | - | tig0026416:15873-15892 | Msa1428880:CDS | 50.0% | |
! | GGGCCGGGGTATAGATATTT+TGG | - | tig0026416:15893-15912 | Msa1428880:CDS | 50.0% |
GAAGAAATTGCCGGGGGTTA+GGG | - | tig0026416:15922-15941 | Msa1428880:CDS | 50.0% | |
TCAAAAAGCTCCCTAACCCC+CGG | + | tig0026416:15935-15954 | None:intergenic | 50.0% | |
GGGAGAGGTTGGATAGGATA+AGG | - | tig0026416:16110-16129 | Msa1428880:CDS | 50.0% | |
GGAGGTTGTTGAGGTTACTG+CGG | - | tig0026416:16162-16181 | Msa1428880:CDS | 50.0% | |
GAGGGAGATACTTCATGAGG+AGG | - | tig0026416:16189-16208 | Msa1428880:CDS | 50.0% | |
TCATGAGGAGGAAGAGGATG+TGG | - | tig0026416:16201-16220 | Msa1428880:CDS | 50.0% | |
AGGAAGAGAGGATGAAGGAG+AGG | - | tig0026416:16227-16246 | Msa1428880:CDS | 50.0% | |
GGAAGAGAGGATGAAGGAGA+GGG | - | tig0026416:16228-16247 | Msa1428880:CDS | 50.0% | |
GATGAAGGAGAGGGAGATGA+GGG | - | tig0026416:16237-16256 | Msa1428880:CDS | 50.0% | |
! | TGTTGTGCATGTGCCATTGC+CGG | - | tig0026416:16288-16307 | Msa1428880:CDS | 50.0% |
TTCGTTGAGGTCACGGCATT+CGG | + | tig0026416:15630-15649 | None:intergenic | 50.0% | |
ACCTCAACGAAGCCGACAAA+TGG | - | tig0026416:15639-15658 | Msa1428880:CDS | 50.0% | |
TCTGAATCTCGGCGACTTTG+CGG | + | tig0026416:15691-15710 | None:intergenic | 50.0% | |
TTGGAGGACCGAATTATGCG+AGG | - | tig0026416:15807-15826 | Msa1428880:CDS | 50.0% | |
GTTCCTAACCCTAGTGGAAG+GGG | - | tig0026416:15872-15891 | Msa1428880:CDS | 50.0% | |
TTCCTAACCCTAGTGGAAGG+GGG | - | tig0026416:15873-15892 | Msa1428880:CDS | 50.0% | |
! | GGGCCGGGGTATAGATATTT+TGG | - | tig0026416:15893-15912 | Msa1428880:CDS | 50.0% |
GAAGAAATTGCCGGGGGTTA+GGG | - | tig0026416:15922-15941 | Msa1428880:CDS | 50.0% | |
TCAAAAAGCTCCCTAACCCC+CGG | + | tig0026416:15935-15954 | None:intergenic | 50.0% | |
GGGAGAGGTTGGATAGGATA+AGG | - | tig0026416:16110-16129 | Msa1428880:CDS | 50.0% | |
GGAGGTTGTTGAGGTTACTG+CGG | - | tig0026416:16162-16181 | Msa1428880:CDS | 50.0% | |
GAGGGAGATACTTCATGAGG+AGG | - | tig0026416:16189-16208 | Msa1428880:CDS | 50.0% | |
TCATGAGGAGGAAGAGGATG+TGG | - | tig0026416:16201-16220 | Msa1428880:CDS | 50.0% | |
AGGAAGAGAGGATGAAGGAG+AGG | - | tig0026416:16227-16246 | Msa1428880:CDS | 50.0% | |
GGAAGAGAGGATGAAGGAGA+GGG | - | tig0026416:16228-16247 | Msa1428880:CDS | 50.0% | |
GATGAAGGAGAGGGAGATGA+GGG | - | tig0026416:16237-16256 | Msa1428880:CDS | 50.0% | |
! | TGTTGTGCATGTGCCATTGC+CGG | - | tig0026416:16288-16307 | Msa1428880:CDS | 50.0% |
CGGCATTCGGAAGCGAGAAA+AGG | + | tig0026416:15617-15636 | None:intergenic | 55.0% | |
!! | TGTCGGCTTCGTTGAGGTCA+CGG | + | tig0026416:15637-15656 | None:intergenic | 55.0% |
!! | GCCATTTGTCGGCTTCGTTG+AGG | + | tig0026416:15643-15662 | None:intergenic | 55.0% |
GTCGCCGAGATTCAGAACGA+AGG | - | tig0026416:15695-15714 | Msa1428880:CDS | 55.0% | |
CGTCGTTGAGATCACGGAGA+CGG | + | tig0026416:15733-15752 | None:intergenic | 55.0% | |
TGGTGCGGCGAAGAAATTGC+CGG | - | tig0026416:15913-15932 | Msa1428880:CDS | 55.0% | |
CGAAGAAATTGCCGGGGGTT+AGG | - | tig0026416:15921-15940 | Msa1428880:CDS | 55.0% | |
TTGAGAAGCCGCCAGAGTTG+AGG | - | tig0026416:15951-15970 | Msa1428880:CDS | 55.0% | |
AGCCGCCAGAGTTGAGGAAA+CGG | - | tig0026416:15957-15976 | Msa1428880:CDS | 55.0% | |
CTCCGTTTCCTCAACTCTGG+CGG | + | tig0026416:15962-15981 | None:intergenic | 55.0% | |
GTCCTCCGTTTCCTCAACTC+TGG | + | tig0026416:15965-15984 | None:intergenic | 55.0% | |
!! | TGGGATATTGGAGCGGGTTG+AGG | - | tig0026416:16045-16064 | Msa1428880:CDS | 55.0% |
! | CACCGGCTGAGGAATGTATG+AGG | - | tig0026416:16068-16087 | Msa1428880:CDS | 55.0% |
CGCCTCATACATTCCTCAGC+CGG | + | tig0026416:16073-16092 | None:intergenic | 55.0% | |
CGGCTGAGGAATGTATGAGG+CGG | - | tig0026416:16071-16090 | Msa1428880:CDS | 55.0% | |
GGCTGAGGAATGTATGAGGC+GGG | - | tig0026416:16072-16091 | Msa1428880:CDS | 55.0% | |
TGAGGAATGTATGAGGCGGG+AGG | - | tig0026416:16075-16094 | Msa1428880:CDS | 55.0% | |
AGGAGTGGGAGAGGTTGGAT+AGG | - | tig0026416:16104-16123 | Msa1428880:CDS | 55.0% | |
AGGAAGCTAGGAAGGCTGTG+AGG | - | tig0026416:16134-16153 | Msa1428880:CDS | 55.0% | |
CTAGGAAGGCTGTGAGGAGT+GGG | - | tig0026416:16140-16159 | Msa1428880:CDS | 55.0% | |
TAGGAAGGCTGTGAGGAGTG+GGG | - | tig0026416:16141-16160 | Msa1428880:CDS | 55.0% | |
TTGAGGTTACTGCGGCTACG+AGG | - | tig0026416:16170-16189 | Msa1428880:CDS | 55.0% | |
TGAGGTTACTGCGGCTACGA+GGG | - | tig0026416:16171-16190 | Msa1428880:CDS | 55.0% | |
TGAGGAGGAAGAGGATGTGG+TGG | - | tig0026416:16204-16223 | Msa1428880:CDS | 55.0% | |
! | AGGATGTGGTGGAGGAAGAG+AGG | - | tig0026416:16215-16234 | Msa1428880:CDS | 55.0% |
GGTGGAGGAAGAGAGGATGA+AGG | - | tig0026416:16222-16241 | Msa1428880:CDS | 55.0% | |
GGATGAAGGAGAGGGAGATG+AGG | - | tig0026416:16236-16255 | Msa1428880:CDS | 55.0% | |
GGAGGAGCAGACTGAAGCTA+AGG | - | tig0026416:16390-16409 | Msa1428880:CDS | 55.0% | |
CGGCATTCGGAAGCGAGAAA+AGG | + | tig0026416:15617-15636 | None:intergenic | 55.0% | |
!! | TGTCGGCTTCGTTGAGGTCA+CGG | + | tig0026416:15637-15656 | None:intergenic | 55.0% |
!! | GCCATTTGTCGGCTTCGTTG+AGG | + | tig0026416:15643-15662 | None:intergenic | 55.0% |
GTCGCCGAGATTCAGAACGA+AGG | - | tig0026416:15695-15714 | Msa1428880:CDS | 55.0% | |
CGTCGTTGAGATCACGGAGA+CGG | + | tig0026416:15733-15752 | None:intergenic | 55.0% | |
TGGTGCGGCGAAGAAATTGC+CGG | - | tig0026416:15913-15932 | Msa1428880:CDS | 55.0% | |
CGAAGAAATTGCCGGGGGTT+AGG | - | tig0026416:15921-15940 | Msa1428880:CDS | 55.0% | |
TTGAGAAGCCGCCAGAGTTG+AGG | - | tig0026416:15951-15970 | Msa1428880:CDS | 55.0% | |
AGCCGCCAGAGTTGAGGAAA+CGG | - | tig0026416:15957-15976 | Msa1428880:CDS | 55.0% | |
CTCCGTTTCCTCAACTCTGG+CGG | + | tig0026416:15962-15981 | None:intergenic | 55.0% | |
GTCCTCCGTTTCCTCAACTC+TGG | + | tig0026416:15965-15984 | None:intergenic | 55.0% | |
!! | TGGGATATTGGAGCGGGTTG+AGG | - | tig0026416:16045-16064 | Msa1428880:CDS | 55.0% |
! | CACCGGCTGAGGAATGTATG+AGG | - | tig0026416:16068-16087 | Msa1428880:CDS | 55.0% |
CGCCTCATACATTCCTCAGC+CGG | + | tig0026416:16073-16092 | None:intergenic | 55.0% | |
CGGCTGAGGAATGTATGAGG+CGG | - | tig0026416:16071-16090 | Msa1428880:CDS | 55.0% | |
GGCTGAGGAATGTATGAGGC+GGG | - | tig0026416:16072-16091 | Msa1428880:CDS | 55.0% | |
TGAGGAATGTATGAGGCGGG+AGG | - | tig0026416:16075-16094 | Msa1428880:CDS | 55.0% | |
AGGAGTGGGAGAGGTTGGAT+AGG | - | tig0026416:16104-16123 | Msa1428880:CDS | 55.0% | |
AGGAAGCTAGGAAGGCTGTG+AGG | - | tig0026416:16134-16153 | Msa1428880:CDS | 55.0% | |
CTAGGAAGGCTGTGAGGAGT+GGG | - | tig0026416:16140-16159 | Msa1428880:CDS | 55.0% | |
TAGGAAGGCTGTGAGGAGTG+GGG | - | tig0026416:16141-16160 | Msa1428880:CDS | 55.0% | |
TTGAGGTTACTGCGGCTACG+AGG | - | tig0026416:16170-16189 | Msa1428880:CDS | 55.0% | |
TGAGGTTACTGCGGCTACGA+GGG | - | tig0026416:16171-16190 | Msa1428880:CDS | 55.0% | |
TGAGGAGGAAGAGGATGTGG+TGG | - | tig0026416:16204-16223 | Msa1428880:CDS | 55.0% | |
! | AGGATGTGGTGGAGGAAGAG+AGG | - | tig0026416:16215-16234 | Msa1428880:CDS | 55.0% |
GGTGGAGGAAGAGAGGATGA+AGG | - | tig0026416:16222-16241 | Msa1428880:CDS | 55.0% | |
GGATGAAGGAGAGGGAGATG+AGG | - | tig0026416:16236-16255 | Msa1428880:CDS | 55.0% | |
GGAGGAGCAGACTGAAGCTA+AGG | - | tig0026416:16390-16409 | Msa1428880:CDS | 55.0% | |
TAACCCTAGTGGAAGGGGGC+CGG | - | tig0026416:15877-15896 | Msa1428880:CDS | 60.0% | |
GGTGCGGCGAAGAAATTGCC+GGG | - | tig0026416:15914-15933 | Msa1428880:CDS | 60.0% | |
GTGCGGCGAAGAAATTGCCG+GGG | - | tig0026416:15915-15934 | Msa1428880:CDS | 60.0% | |
TGCGGCGAAGAAATTGCCGG+GGG | - | tig0026416:15916-15935 | Msa1428880:CDS | 60.0% | |
CGCCAGAGTTGAGGAAACGG+AGG | - | tig0026416:15960-15979 | Msa1428880:CDS | 60.0% | |
!! | ATTGGAGCGGGTTGAGGCAC+CGG | - | tig0026416:16051-16070 | Msa1428880:CDS | 60.0% |
GGAATGTATGAGGCGGGAGG+CGG | - | tig0026416:16078-16097 | Msa1428880:CDS | 60.0% | |
GGTTGAGGAGTGGGAGAGGT+TGG | - | tig0026416:16099-16118 | Msa1428880:CDS | 60.0% | |
GCTAGGAAGGCTGTGAGGAG+TGG | - | tig0026416:16139-16158 | Msa1428880:CDS | 60.0% | |
GAGGAGTGGGGAGGTTGTTG+AGG | - | tig0026416:16153-16172 | Msa1428880:CDS | 60.0% | |
GGAGGAAGAGGATGTGGTGG+AGG | - | tig0026416:16207-16226 | Msa1428880:CDS | 60.0% | |
AGGAGAGGGAGATGAGGGAG+AGG | - | tig0026416:16242-16261 | Msa1428880:CDS | 60.0% | |
GAGGGAGATGAGGGAGAGGT+TGG | - | tig0026416:16246-16265 | Msa1428880:CDS | 60.0% | |
TAACCCTAGTGGAAGGGGGC+CGG | - | tig0026416:15877-15896 | Msa1428880:CDS | 60.0% | |
GGTGCGGCGAAGAAATTGCC+GGG | - | tig0026416:15914-15933 | Msa1428880:CDS | 60.0% | |
GTGCGGCGAAGAAATTGCCG+GGG | - | tig0026416:15915-15934 | Msa1428880:CDS | 60.0% | |
TGCGGCGAAGAAATTGCCGG+GGG | - | tig0026416:15916-15935 | Msa1428880:CDS | 60.0% | |
CGCCAGAGTTGAGGAAACGG+AGG | - | tig0026416:15960-15979 | Msa1428880:CDS | 60.0% | |
!! | ATTGGAGCGGGTTGAGGCAC+CGG | - | tig0026416:16051-16070 | Msa1428880:CDS | 60.0% |
GGAATGTATGAGGCGGGAGG+CGG | - | tig0026416:16078-16097 | Msa1428880:CDS | 60.0% | |
GGTTGAGGAGTGGGAGAGGT+TGG | - | tig0026416:16099-16118 | Msa1428880:CDS | 60.0% | |
GCTAGGAAGGCTGTGAGGAG+TGG | - | tig0026416:16139-16158 | Msa1428880:CDS | 60.0% | |
GAGGAGTGGGGAGGTTGTTG+AGG | - | tig0026416:16153-16172 | Msa1428880:CDS | 60.0% | |
GGAGGAAGAGGATGTGGTGG+AGG | - | tig0026416:16207-16226 | Msa1428880:CDS | 60.0% | |
AGGAGAGGGAGATGAGGGAG+AGG | - | tig0026416:16242-16261 | Msa1428880:CDS | 60.0% | |
GAGGGAGATGAGGGAGAGGT+TGG | - | tig0026416:16246-16265 | Msa1428880:CDS | 60.0% | |
GGCCCCCTTCCACTAGGGTT+AGG | + | tig0026416:15878-15897 | None:intergenic | 65.0% | |
AACCCTAGTGGAAGGGGGCC+GGG | - | tig0026416:15878-15897 | Msa1428880:CDS | 65.0% | |
TATGAGGCGGGAGGCGGTTG+AGG | - | tig0026416:16084-16103 | Msa1428880:CDS | 65.0% | |
AGGCGGTTGAGGAGTGGGAG+AGG | - | tig0026416:16095-16114 | Msa1428880:CDS | 65.0% | |
GAAGGCTGTGAGGAGTGGGG+AGG | - | tig0026416:16144-16163 | Msa1428880:CDS | 65.0% | |
GGCCCCCTTCCACTAGGGTT+AGG | + | tig0026416:15878-15897 | None:intergenic | 65.0% | |
AACCCTAGTGGAAGGGGGCC+GGG | - | tig0026416:15878-15897 | Msa1428880:CDS | 65.0% | |
TATGAGGCGGGAGGCGGTTG+AGG | - | tig0026416:16084-16103 | Msa1428880:CDS | 65.0% | |
AGGCGGTTGAGGAGTGGGAG+AGG | - | tig0026416:16095-16114 | Msa1428880:CDS | 65.0% | |
GAAGGCTGTGAGGAGTGGGG+AGG | - | tig0026416:16144-16163 | Msa1428880:CDS | 65.0% | |
ACCCTAGTGGAAGGGGGCCG+GGG | - | tig0026416:15879-15898 | Msa1428880:CDS | 70.0% | |
ACCCCGGCCCCCTTCCACTA+GGG | + | tig0026416:15883-15902 | None:intergenic | 70.0% | |
TACCCCGGCCCCCTTCCACT+AGG | + | tig0026416:15884-15903 | None:intergenic | 70.0% | |
GCGGGAGGCGGTTGAGGAGT+GGG | - | tig0026416:16090-16109 | Msa1428880:CDS | 70.0% | |
ACCCTAGTGGAAGGGGGCCG+GGG | - | tig0026416:15879-15898 | Msa1428880:CDS | 70.0% | |
ACCCCGGCCCCCTTCCACTA+GGG | + | tig0026416:15883-15902 | None:intergenic | 70.0% | |
TACCCCGGCCCCCTTCCACT+AGG | + | tig0026416:15884-15903 | None:intergenic | 70.0% | |
GCGGGAGGCGGTTGAGGAGT+GGG | - | tig0026416:16090-16109 | Msa1428880:CDS | 70.0% | |
!! | GCGGGTTGAGGCACCGGCTG+AGG | - | tig0026416:16057-16076 | Msa1428880:CDS | 75.0% |
GGCGGGAGGCGGTTGAGGAG+TGG | - | tig0026416:16089-16108 | Msa1428880:CDS | 75.0% | |
!! | GCGGGTTGAGGCACCGGCTG+AGG | - | tig0026416:16057-16076 | Msa1428880:CDS | 75.0% |
GGCGGGAGGCGGTTGAGGAG+TGG | - | tig0026416:16089-16108 | Msa1428880:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0026416 | gene | 15524 | 16435 | 15524 | ID=Msa1428880;Name=Msa1428880 |
tig0026416 | mRNA | 15524 | 16435 | 15524 | ID=Msa1428880-mRNA-1;Parent=Msa1428880;Name=Msa1428880-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|303 |
tig0026416 | exon | 15524 | 16435 | 15524 | ID=Msa1428880-mRNA-1:exon:6221;Parent=Msa1428880-mRNA-1 |
tig0026416 | CDS | 15524 | 16435 | 15524 | ID=Msa1428880-mRNA-1:cds;Parent=Msa1428880-mRNA-1 |
Gene Sequence |
Protein sequence |