Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0414730 | XP_013460469.1 | 81.773 | 203 | 17 | 2 | 1 | 183 | 22 | 224 | 5.98e-111 | 325 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0414730 | sp|P25317|GSTXA_TOBAC | 57.426 | 202 | 66 | 2 | 1 | 182 | 18 | 219 | 1.29e-77 | 234 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0414730 | I3SI44 | 81.773 | 203 | 17 | 2 | 1 | 183 | 22 | 224 | 2.86e-111 | 325 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043850 | Msa0414730 | 0.808446 | 3.084295e-50 | -8.615850e-47 |
| Msa0052780 | Msa0414730 | 0.820336 | 7.239740e-53 | -8.615850e-47 |
| Msa0077370 | Msa0414730 | 0.805549 | 1.265506e-49 | -8.615850e-47 |
| Msa0090380 | Msa0414730 | 0.803797 | 2.935970e-49 | -8.615850e-47 |
| Msa0094710 | Msa0414730 | 0.812142 | 4.918467e-51 | -8.615850e-47 |
| Msa0097570 | Msa0414730 | 0.825691 | 4.083240e-54 | -8.615850e-47 |
| Msa0129640 | Msa0414730 | 0.816143 | 6.438873e-52 | -8.615850e-47 |
| Msa0137980 | Msa0414730 | 0.810200 | 1.297361e-50 | -8.615850e-47 |
| Msa0145430 | Msa0414730 | 0.807444 | 5.040233e-50 | -8.615850e-47 |
| Msa0170770 | Msa0414730 | 0.803000 | 4.295304e-49 | -8.615850e-47 |
| Msa0203090 | Msa0414730 | 0.805727 | 1.161088e-49 | -8.615850e-47 |
| Msa0366780 | Msa0414730 | 0.986923 | 1.948529e-168 | -8.615850e-47 |
| Msa0366810 | Msa0414730 | 0.845467 | 3.989492e-59 | -8.615850e-47 |
| Msa0414730 | Msa0414740 | 0.849487 | 3.133423e-60 | -8.615850e-47 |
| Msa0414730 | Msa0443450 | 0.805766 | 1.139167e-49 | -8.615850e-47 |
| Msa0414730 | Msa0488580 | 0.813673 | 2.272831e-51 | -8.615850e-47 |
| Msa0414730 | Msa0506370 | 0.820904 | 5.359984e-53 | -8.615850e-47 |
| Msa0414730 | Msa0600590 | 0.801360 | 9.341611e-49 | -8.615850e-47 |
| Msa0414730 | Msa0611060 | 0.842476 | 2.526149e-58 | -8.615850e-47 |
| Msa0414730 | Msa0618550 | 0.812884 | 3.386000e-51 | -8.615850e-47 |
| Msa0414730 | Msa0679670 | 0.806750 | 7.069638e-50 | -8.615850e-47 |
| Msa0414730 | Msa0713060 | 0.844419 | 7.647720e-59 | -8.615850e-47 |
| Msa0414730 | Msa0744640 | 0.832366 | 9.849243e-56 | -8.615850e-47 |
| Msa0414730 | Msa0816630 | 0.800846 | 1.189635e-48 | -8.615850e-47 |
| Msa0414730 | Msa0841730 | 0.831501 | 1.610871e-55 | -8.615850e-47 |
| Msa0414730 | Msa1000800 | 0.817977 | 2.492041e-52 | -8.615850e-47 |
| Msa0414730 | Msa1011250 | 0.814562 | 1.446304e-51 | -8.615850e-47 |
| Msa0414730 | Msa1016960 | 0.835404 | 1.711190e-56 | -8.615850e-47 |
| Msa0414730 | Msa1058200 | 0.845447 | 4.039364e-59 | -8.615850e-47 |
| Msa0414730 | Msa1070540 | 0.802263 | 6.095109e-49 | -8.615850e-47 |
| Msa0414730 | Msa1101240 | 0.802888 | 4.530191e-49 | -8.615850e-47 |
| Msa0414730 | Msa1113100 | 0.809782 | 1.595792e-50 | -8.615850e-47 |
| Msa0414730 | Msa1173150 | 0.821514 | 3.877333e-53 | -8.615850e-47 |
| Msa0414730 | Msa1188350 | 0.813369 | 2.651152e-51 | -8.615850e-47 |
| Msa0414730 | Msa1199870 | 0.814529 | 1.470967e-51 | -8.615850e-47 |
| Msa0414730 | Msa1208990 | 0.815252 | 1.016656e-51 | -8.615850e-47 |
| Msa0414730 | Msa1221220 | 0.828407 | 9.145746e-55 | -8.615850e-47 |
| Msa0414730 | Msa1225580 | 0.804386 | 2.214322e-49 | -8.615850e-47 |
| Msa0414730 | Msa1252810 | 0.845418 | 4.111865e-59 | -8.615850e-47 |
| Msa0414730 | Msa1350700 | 0.801285 | 9.678982e-49 | -8.615850e-47 |
| Msa0414730 | Msa1355510 | 0.814162 | 1.772581e-51 | -8.615850e-47 |
| Msa0414730 | Msa1360260 | 0.812181 | 4.823002e-51 | -8.615850e-47 |
| Msa0414730 | Msa1379020 | 0.806859 | 6.701962e-50 | -8.615850e-47 |
| Msa0414730 | Msa1404050 | 0.809727 | 1.640202e-50 | -8.615850e-47 |
| Msa0414730 | Msa1412410 | 0.823643 | 1.240349e-53 | -8.615850e-47 |
| Msa0414730 | Msa1427860 | 0.823997 | 1.024401e-53 | -8.615850e-47 |
| Msa0414730 | Msa1433410 | 0.806487 | 8.031036e-50 | -8.615850e-47 |
| Msa0414730 | Msa1435320 | 0.818537 | 1.861563e-52 | -8.615850e-47 |
| Msa0414730 | Msa1443400 | 0.820016 | 8.568868e-53 | -8.615850e-47 |
| Msa0414730 | Msa1443620 | 0.802754 | 4.828928e-49 | -8.615850e-47 |
| Msa0414730 | Msa1448040 | 0.821226 | 4.517775e-53 | -8.615850e-47 |
| Msa0264680 | Msa0414730 | 0.812711 | 3.695446e-51 | -8.615850e-47 |
| Msa0265480 | Msa0414730 | 0.828295 | 9.734916e-55 | -8.615850e-47 |
| Msa0276430 | Msa0414730 | 0.804944 | 1.693403e-49 | -8.615850e-47 |
| Msa0302730 | Msa0414730 | 0.801486 | 8.802745e-49 | -8.615850e-47 |
| Msa0306310 | Msa0414730 | 0.808225 | 3.438983e-50 | -8.615850e-47 |
| Msa0319680 | Msa0414730 | 0.802159 | 6.403491e-49 | -8.615850e-47 |
| Msa0340370 | Msa0414730 | 0.816548 | 5.224788e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0414730 | MtrunA17_Chr3g0107741 | 81.773 | 203 | 17 | 2 | 1 | 183 | 22 | 224 | 5.50e-115 | 325 |
| Msa0414730 | MtrunA17_Chr3g0107731 | 77.340 | 203 | 26 | 2 | 1 | 183 | 22 | 224 | 4.38e-107 | 305 |
| Msa0414730 | MtrunA17_Chr2g0312771 | 54.680 | 203 | 72 | 2 | 1 | 183 | 17 | 219 | 1.27e-73 | 221 |
| Msa0414730 | MtrunA17_Chr2g0312751 | 52.217 | 203 | 77 | 2 | 1 | 183 | 17 | 219 | 1.38e-70 | 213 |
| Msa0414730 | MtrunA17_Chr2g0312681 | 52.217 | 203 | 77 | 2 | 1 | 183 | 17 | 219 | 4.26e-69 | 209 |
| Msa0414730 | MtrunA17_Chr2g0312781 | 52.020 | 198 | 75 | 2 | 1 | 178 | 34 | 231 | 1.69e-67 | 206 |
| Msa0414730 | MtrunA17_Chr2g0312731 | 51.724 | 203 | 78 | 2 | 1 | 183 | 17 | 219 | 4.22e-66 | 201 |
| Msa0414730 | MtrunA17_Chr2g0312691 | 53.202 | 203 | 75 | 2 | 1 | 183 | 17 | 219 | 1.76e-64 | 197 |
| Msa0414730 | MtrunA17_Chr2g0312711 | 51.724 | 203 | 77 | 3 | 1 | 183 | 17 | 218 | 5.48e-63 | 194 |
| Msa0414730 | MtrunA17_Chr8g0357211 | 48.276 | 203 | 85 | 2 | 1 | 183 | 17 | 219 | 3.02e-61 | 189 |
| Msa0414730 | MtrunA17_Chr8g0357241 | 48.276 | 203 | 85 | 2 | 1 | 183 | 17 | 219 | 6.34e-61 | 188 |
| Msa0414730 | MtrunA17_Chr2g0312811 | 49.268 | 205 | 82 | 2 | 1 | 183 | 17 | 221 | 1.40e-60 | 187 |
| Msa0414730 | MtrunA17_Chr2g0312721 | 48.000 | 200 | 84 | 2 | 1 | 180 | 17 | 216 | 5.65e-59 | 183 |
| Msa0414730 | MtrunA17_Chr2g0312791 | 50.732 | 205 | 79 | 4 | 1 | 183 | 17 | 221 | 1.13e-58 | 182 |
| Msa0414730 | MtrunA17_Chr5g0433801 | 42.574 | 202 | 96 | 2 | 2 | 183 | 20 | 221 | 1.37e-51 | 164 |
| Msa0414730 | MtrunA17_Chr4g0069471 | 52.096 | 167 | 57 | 4 | 1 | 146 | 38 | 202 | 4.46e-49 | 157 |
| Msa0414730 | MtrunA17_Chr7g0240681 | 34.536 | 194 | 103 | 6 | 2 | 172 | 21 | 213 | 4.21e-28 | 104 |
| Msa0414730 | MtrunA17_Chr4g0008781 | 34.715 | 193 | 103 | 7 | 2 | 172 | 22 | 213 | 1.82e-27 | 103 |
| Msa0414730 | MtrunA17_Chr8g0363751 | 33.816 | 207 | 106 | 6 | 2 | 177 | 19 | 225 | 6.50e-27 | 102 |
| Msa0414730 | MtrunA17_Chr6g0483141 | 33.990 | 203 | 108 | 6 | 2 | 179 | 17 | 218 | 1.05e-26 | 101 |
| Msa0414730 | MtrunA17_Chr7g0240691 | 32.474 | 194 | 107 | 5 | 2 | 172 | 51 | 243 | 2.01e-26 | 101 |
| Msa0414730 | MtrunA17_Chr3g0132581 | 40.397 | 151 | 71 | 3 | 1 | 132 | 18 | 168 | 3.43e-26 | 99.8 |
| Msa0414730 | MtrunA17_Chr8g0379581 | 35.784 | 204 | 107 | 5 | 2 | 182 | 19 | 221 | 4.52e-26 | 99.4 |
| Msa0414730 | MtrunA17_Chr7g0240541 | 36.316 | 190 | 97 | 7 | 2 | 169 | 21 | 208 | 7.38e-26 | 99.0 |
| Msa0414730 | MtrunA17_Chr5g0415411 | 33.654 | 208 | 109 | 6 | 1 | 179 | 18 | 225 | 9.14e-26 | 99.0 |
| Msa0414730 | MtrunA17_Chr4g0008791 | 32.642 | 193 | 107 | 4 | 2 | 172 | 21 | 212 | 1.40e-25 | 98.2 |
| Msa0414730 | MtrunA17_Chr1g0196771 | 37.245 | 196 | 88 | 9 | 2 | 169 | 17 | 205 | 1.59e-25 | 98.2 |
| Msa0414730 | MtrunA17_Chr7g0240631 | 32.124 | 193 | 108 | 6 | 2 | 172 | 21 | 212 | 2.88e-25 | 97.4 |
| Msa0414730 | MtrunA17_Chr7g0240641 | 32.124 | 193 | 108 | 5 | 2 | 172 | 21 | 212 | 4.21e-25 | 97.1 |
| Msa0414730 | MtrunA17_Chr8g0379561 | 36.413 | 184 | 96 | 4 | 2 | 164 | 20 | 203 | 5.98e-25 | 96.7 |
| Msa0414730 | MtrunA17_Chr7g0240531 | 35.567 | 194 | 102 | 6 | 1 | 172 | 20 | 212 | 7.01e-25 | 96.3 |
| Msa0414730 | MtrunA17_Chr7g0240551 | 34.328 | 201 | 109 | 6 | 2 | 180 | 21 | 220 | 7.40e-25 | 96.3 |
| Msa0414730 | MtrunA17_Chr7g0240561 | 35.052 | 194 | 101 | 7 | 2 | 172 | 21 | 212 | 1.77e-24 | 95.5 |
| Msa0414730 | MtrunA17_Chr7g0240521 | 33.990 | 203 | 110 | 7 | 2 | 182 | 28 | 228 | 1.04e-21 | 88.2 |
| Msa0414730 | MtrunA17_Chr1g0196661 | 31.795 | 195 | 110 | 5 | 1 | 172 | 16 | 210 | 1.53e-21 | 87.8 |
| Msa0414730 | MtrunA17_Chr7g0240611 | 29.381 | 194 | 110 | 6 | 1 | 172 | 20 | 208 | 1.69e-21 | 87.4 |
| Msa0414730 | MtrunA17_Chr1g0196721 | 32.143 | 196 | 110 | 5 | 1 | 173 | 15 | 210 | 6.10e-21 | 85.9 |
| Msa0414730 | MtrunA17_Chr5g0417011 | 30.612 | 196 | 104 | 5 | 2 | 168 | 21 | 213 | 7.64e-21 | 85.9 |
| Msa0414730 | MtrunA17_Chr8g0391631 | 42.735 | 117 | 54 | 4 | 2 | 110 | 35 | 146 | 1.15e-20 | 84.3 |
| Msa0414730 | MtrunA17_Chr7g0240511 | 34.211 | 190 | 98 | 8 | 2 | 170 | 21 | 204 | 1.81e-20 | 84.7 |
| Msa0414730 | MtrunA17_Chr1g0212301 | 33.690 | 187 | 100 | 6 | 2 | 164 | 17 | 203 | 2.16e-20 | 84.7 |
| Msa0414730 | MtrunA17_Chr4g0029341 | 33.333 | 195 | 107 | 5 | 1 | 172 | 17 | 211 | 2.36e-20 | 84.3 |
| Msa0414730 | MtrunA17_Chr7g0240671 | 29.016 | 193 | 112 | 5 | 1 | 172 | 17 | 205 | 4.92e-20 | 83.6 |
| Msa0414730 | MtrunA17_Chr1g0196711 | 32.308 | 195 | 109 | 6 | 1 | 172 | 16 | 210 | 4.80e-19 | 81.3 |
| Msa0414730 | MtrunA17_Chr7g0240651 | 29.897 | 194 | 109 | 6 | 1 | 172 | 20 | 208 | 5.33e-19 | 80.9 |
| Msa0414730 | MtrunA17_Chr7g0240581 | 31.351 | 185 | 104 | 5 | 2 | 164 | 21 | 204 | 5.75e-19 | 80.9 |
| Msa0414730 | MtrunA17_Chr7g0240661 | 32.292 | 192 | 107 | 7 | 1 | 172 | 20 | 208 | 5.78e-19 | 80.9 |
| Msa0414730 | MtrunA17_Chr1g0196691 | 29.146 | 199 | 113 | 5 | 1 | 173 | 41 | 237 | 1.76e-18 | 80.1 |
| Msa0414730 | MtrunA17_Chr2g0313561 | 75.676 | 37 | 9 | 0 | 31 | 67 | 2 | 38 | 2.04e-13 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0414730 | AT1G78370.1 | 55.000 | 200 | 70 | 2 | 1 | 180 | 17 | 216 | 2.78e-73 | 220 |
| Msa0414730 | AT1G78380.1 | 53.535 | 198 | 72 | 2 | 1 | 178 | 17 | 214 | 8.62e-69 | 209 |
| Msa0414730 | AT1G17180.1 | 54.187 | 203 | 73 | 2 | 1 | 183 | 17 | 219 | 2.74e-67 | 205 |
| Msa0414730 | AT1G78360.1 | 50.490 | 204 | 80 | 2 | 1 | 183 | 17 | 220 | 2.20e-63 | 195 |
| Msa0414730 | AT1G17170.1 | 53.202 | 203 | 74 | 4 | 1 | 183 | 17 | 218 | 1.21e-62 | 193 |
| Msa0414730 | AT1G53680.1 | 48.780 | 205 | 83 | 3 | 1 | 183 | 20 | 224 | 8.42e-62 | 191 |
| Msa0414730 | AT1G78340.1 | 47.980 | 198 | 83 | 2 | 1 | 178 | 17 | 214 | 2.23e-58 | 182 |
| Msa0414730 | AT1G78320.1 | 50.265 | 189 | 74 | 2 | 1 | 169 | 17 | 205 | 2.20e-53 | 169 |
| Msa0414730 | AT1G17190.1 | 44.776 | 201 | 91 | 2 | 1 | 181 | 18 | 218 | 1.03e-49 | 160 |
| Msa0414730 | AT3G43800.1 | 44.335 | 203 | 89 | 5 | 2 | 180 | 19 | 221 | 1.03e-47 | 155 |
| Msa0414730 | AT1G78320.2 | 50.292 | 171 | 74 | 4 | 1 | 169 | 17 | 178 | 7.76e-46 | 149 |
| Msa0414730 | AT1G10360.1 | 38.308 | 201 | 96 | 7 | 1 | 173 | 18 | 218 | 7.56e-31 | 112 |
| Msa0414730 | AT2G29420.1 | 38.043 | 184 | 93 | 7 | 2 | 164 | 23 | 206 | 4.10e-27 | 102 |
| Msa0414730 | AT3G09270.1 | 32.812 | 192 | 104 | 4 | 2 | 169 | 20 | 210 | 6.53e-27 | 102 |
| Msa0414730 | AT2G29440.1 | 36.216 | 185 | 96 | 5 | 2 | 164 | 20 | 204 | 7.01e-26 | 99.4 |
| Msa0414730 | AT1G10370.1 | 36.816 | 201 | 99 | 7 | 1 | 173 | 18 | 218 | 7.03e-26 | 99.4 |
| Msa0414730 | AT1G59700.1 | 35.323 | 201 | 101 | 6 | 1 | 172 | 19 | 219 | 7.59e-26 | 99.4 |
| Msa0414730 | AT1G59670.1 | 33.333 | 207 | 109 | 6 | 1 | 178 | 19 | 225 | 2.92e-23 | 92.8 |
| Msa0414730 | AT2G29480.1 | 36.022 | 186 | 95 | 7 | 2 | 164 | 21 | 205 | 6.91e-23 | 91.7 |
| Msa0414730 | AT1G74590.1 | 32.212 | 208 | 105 | 7 | 2 | 178 | 21 | 223 | 8.21e-23 | 91.7 |
| Msa0414730 | AT1G27130.1 | 30.392 | 204 | 113 | 6 | 1 | 175 | 19 | 222 | 5.58e-22 | 89.4 |
| Msa0414730 | AT2G29490.1 | 34.595 | 185 | 99 | 5 | 2 | 164 | 21 | 205 | 5.60e-22 | 89.4 |
| Msa0414730 | AT5G62480.1 | 31.980 | 197 | 103 | 7 | 2 | 168 | 22 | 217 | 2.22e-21 | 87.8 |
| Msa0414730 | AT2G29450.1 | 33.838 | 198 | 107 | 6 | 2 | 176 | 20 | 216 | 3.12e-21 | 87.0 |
| Msa0414730 | AT1G27140.1 | 30.244 | 205 | 113 | 5 | 1 | 175 | 19 | 223 | 5.43e-21 | 87.0 |
| Msa0414730 | AT2G29460.1 | 36.022 | 186 | 95 | 6 | 2 | 164 | 21 | 205 | 6.71e-20 | 83.6 |
| Msa0414730 | AT2G29470.1 | 33.333 | 201 | 102 | 8 | 2 | 171 | 21 | 220 | 1.61e-19 | 82.8 |
| Msa0414730 | AT1G69920.1 | 27.941 | 204 | 114 | 6 | 1 | 173 | 47 | 248 | 1.84e-17 | 77.8 |
| Msa0414730 | AT1G69930.1 | 27.500 | 200 | 118 | 5 | 1 | 173 | 25 | 224 | 1.30e-15 | 72.4 |
Find 38 sgRNAs with CRISPR-Local
Find 651 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTATACCCTTCACTAGT+TGG | 0.309754 | 3_2:+60423883 | Msa0414730:CDS |
| CCTCACCCACACAAAATCTA+TGG | 0.317024 | 3_2:+60424014 | Msa0414730:CDS |
| TGACTTTGGGTATGATGATT+TGG | 0.319984 | 3_2:+60423860 | Msa0414730:CDS |
| AAGTCATCTCCATCAAAATA+TGG | 0.330764 | 3_2:-60423843 | None:intergenic |
| AATACTAAATAATATATCAT+TGG | 0.382807 | 3_2:+60424290 | Msa0414730:three_prime_UTR |
| TTTCCATTATGAATCAAAAC+CGG | 0.387545 | 3_2:-60417411 | None:intergenic |
| TTGTTTATCAGCTTATTAGA+TGG | 0.394097 | 3_2:-60424233 | None:intergenic |
| GGACTTGAATAGAGATCGTT+GGG | 0.394706 | 3_2:+60424065 | Msa0414730:exon |
| TTTACACTTACGAGATATAT+GGG | 0.406047 | 3_2:+60423907 | Msa0414730:CDS |
| TATATTAAGTGATTCACATA+TGG | 0.416576 | 3_2:-60417436 | None:intergenic |
| GTGTCCTAAGCTTGTAGCTT+GGG | 0.417667 | 3_2:+60423950 | Msa0414730:CDS |
| TTGGCCCAAGCTACAAGCTT+AGG | 0.422848 | 3_2:-60423954 | None:intergenic |
| AGCTTGTAGCTTGGGCCAAA+AGG | 0.454879 | 3_2:+60423958 | Msa0414730:CDS |
| GAAGGCTTGAAGACTCTAGA+AGG | 0.460833 | 3_2:+60423804 | Msa0414730:CDS |
| ATAAGCTGATAAACAAAAGA+AGG | 0.488348 | 3_2:+60424240 | Msa0414730:three_prime_UTR |
| TCGAGTACATTGATGAAGCT+TGG | 0.489872 | 3_2:+60417460 | Msa0414730:CDS |
| TTCCATTATGAATCAAAACC+GGG | 0.499276 | 3_2:-60417410 | None:intergenic |
| AGCTTGGGCCAAAAGGTGTA+TGG | 0.501382 | 3_2:+60423965 | Msa0414730:CDS |
| AAGACTCTAGAAGGTGAGCT+TGG | 0.503893 | 3_2:+60423813 | Msa0414730:CDS |
| AGAGATCGTTGGGGATTGCA+TGG | 0.510596 | 3_2:+60424075 | Msa0414730:exon |
| AGGAAAGGTTGAAGAACAAG+AGG | 0.520776 | 3_2:+60423761 | Msa0414730:CDS |
| AATGAGGGTGAAAATCGCTT+TGG | 0.526915 | 3_2:+60417299 | None:intergenic |
| ACAGCATTCGAAGGAAGCTA+TGG | 0.529203 | 3_2:+60423736 | Msa0414730:CDS |
| AGTGTCCTAAGCTTGTAGCT+TGG | 0.541196 | 3_2:+60423949 | Msa0414730:CDS |
| AGTGTAAAACCAACTAGTGA+AGG | 0.558553 | 3_2:-60423892 | None:intergenic |
| AAGGTTGAAGAACAAGAGGA+AGG | 0.559445 | 3_2:+60423765 | Msa0414730:CDS |
| TGGACTTGAATAGAGATCGT+TGG | 0.565527 | 3_2:+60424064 | Msa0414730:exon |
| ATGCAATATAAACAAAGCCA+TGG | 0.568014 | 3_2:+60424044 | Msa0414730:CDS |
| GAAAATCGCTTTGGAAGAGA+AGG | 0.575578 | 3_2:+60417308 | Msa0414730:CDS |
| ACGATCTCTATTCAAGTCCA+TGG | 0.582640 | 3_2:-60424061 | None:intergenic |
| GTGTAAAACCAACTAGTGAA+GGG | 0.625155 | 3_2:-60423891 | None:intergenic |
| GAGATCGTTGGGGATTGCAT+GGG | 0.626280 | 3_2:+60424076 | Msa0414730:exon |
| TGTAGGTATACAGCATTCGA+AGG | 0.630244 | 3_2:+60423727 | Msa0414730:intron |
| ATTCGAAGGAAGCTATGGAA+AGG | 0.640495 | 3_2:+60423741 | Msa0414730:CDS |
| AGGGTCACAGGGCAAAAGAG+AGG | 0.649220 | 3_2:-60417492 | None:intergenic |
| AAGGAAGCTATGGAAAGGAA+AGG | 0.650275 | 3_2:+60423746 | Msa0414730:CDS |
| AAAATCGCTTTGGAAGAGAA+GGG | 0.671848 | 3_2:+60417309 | Msa0414730:CDS |
| GACTTGAATAGAGATCGTTG+GGG | 0.727300 | 3_2:+60424066 | Msa0414730:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAATCTTTGTT+TGG | - | chr3_2:60423651-60423670 | None:intergenic | 10.0% |
| !!! | ATGTAAAATATGTTTTTTTA+AGG | + | chr3_2:60424159-60424178 | Msa0414730:three_prime_UTR | 10.0% |
| !!! | TATTTTAATTTAATCAAAAG+TGG | - | chr3_2:60424274-60424293 | None:intergenic | 10.0% |
| !! | AATACTAAATAATATATCAT+TGG | + | chr3_2:60424290-60424309 | Msa0414730:three_prime_UTR | 10.0% |
| !! | ATAAAAAAAAACTCTTTACA+GGG | - | chr3_2:60417758-60417777 | None:intergenic | 15.0% |
| !! | TATAAAAAAAAACTCTTTAC+AGG | - | chr3_2:60417759-60417778 | None:intergenic | 15.0% |
| !!! | TATTTTGATAAGATAGTTAT+TGG | + | chr3_2:60418268-60418287 | Msa0414730:intron | 15.0% |
| !!! | TAATAATTTTAGTAGTAAGT+GGG | - | chr3_2:60423300-60423319 | None:intergenic | 15.0% |
| !! | AAAATATGGTTCAATATTTA+TGG | - | chr3_2:60423499-60423518 | None:intergenic | 15.0% |
| !!! | AACATATTTTACATTAACAA+TGG | - | chr3_2:60424153-60424172 | None:intergenic | 15.0% |
| !! | TATATTAAGTGATTCACATA+TGG | - | chr3_2:60417439-60417458 | None:intergenic | 20.0% |
| !! | TAAAAAAAAACTCTTTACAG+GGG | - | chr3_2:60417757-60417776 | None:intergenic | 20.0% |
| !! | AAATGTTAAAAAACAAGAGA+AGG | + | chr3_2:60417801-60417820 | Msa0414730:intron | 20.0% |
| !! | TACACCTAATATTGTATATA+AGG | + | chr3_2:60417899-60417918 | Msa0414730:intron | 20.0% |
| !! | ACACCTAATATTGTATATAA+GGG | + | chr3_2:60417900-60417919 | Msa0414730:intron | 20.0% |
| !! | TTTCCCTTATATACAATATT+AGG | - | chr3_2:60417906-60417925 | None:intergenic | 20.0% |
| !!! | TGTTTGTAAGTTTTTATCAA+TGG | + | chr3_2:60417973-60417992 | Msa0414730:intron | 20.0% |
| !! | AGATTTATGTAGTTTAGATT+GGG | - | chr3_2:60418011-60418030 | None:intergenic | 20.0% |
| !! | TAGATTTATGTAGTTTAGAT+TGG | - | chr3_2:60418012-60418031 | None:intergenic | 20.0% |
| !! | AGAGATTAGTAAGAAAAAAT+CGG | - | chr3_2:60418110-60418129 | None:intergenic | 20.0% |
| !! | AACTATATTCAGAAAAAACT+TGG | + | chr3_2:60418172-60418191 | Msa0414730:intron | 20.0% |
| !! | ACTATATTCAGAAAAAACTT+GGG | + | chr3_2:60418173-60418192 | Msa0414730:intron | 20.0% |
| !! | TATATCTCTCTTTAACATTA+TGG | - | chr3_2:60418361-60418380 | None:intergenic | 20.0% |
| !!! | TCTGTTTTTTGGAATAATAT+GGG | + | chr3_2:60419260-60419279 | Msa0414730:intron | 20.0% |
| !!! | TTTTCGGTAATATTTTCAAA+AGG | + | chr3_2:60419990-60420009 | Msa0414730:intron | 20.0% |
| !! | CATATTGAAAATAGACTTAA+GGG | + | chr3_2:60420019-60420038 | Msa0414730:intron | 20.0% |
| !!! | GAGTCTTTTAAAATACTTTT+GGG | - | chr3_2:60420308-60420327 | None:intergenic | 20.0% |
| !!! | AGAGTCTTTTAAAATACTTT+TGG | - | chr3_2:60420309-60420328 | None:intergenic | 20.0% |
| !! | CCAATAAGATTATTAAGAAT+GGG | - | chr3_2:60420721-60420740 | None:intergenic | 20.0% |
| !! | AAACAACAAGAAACTTTATT+TGG | + | chr3_2:60421594-60421613 | Msa0414730:intron | 20.0% |
| !! | ATATCATGAATATCTATAAC+CGG | - | chr3_2:60421980-60421999 | None:intergenic | 20.0% |
| !! | TATTCATGATATTCACTTAA+CGG | + | chr3_2:60421988-60422007 | Msa0414730:intron | 20.0% |
| !! | TCAAGACATAAAAGATTTAT+TGG | + | chr3_2:60422996-60423015 | Msa0414730:intron | 20.0% |
| !! | TATAAAAGCTAAGATTACAA+AGG | - | chr3_2:60423247-60423266 | None:intergenic | 20.0% |
| !!! | ACATGGTTGAATTTTTTTTT+TGG | - | chr3_2:60423270-60423289 | None:intergenic | 20.0% |
| !!! | CTAATAATTTTAGTAGTAAG+TGG | - | chr3_2:60423301-60423320 | None:intergenic | 20.0% |
| !!! | TGTATGTTTGATTTCATTTA+TGG | - | chr3_2:60423459-60423478 | None:intergenic | 20.0% |
| !! | ATATACTAGTTGACAAAATA+TGG | - | chr3_2:60423513-60423532 | None:intergenic | 20.0% |
| !! | ATGGATAATAATGTAAAAGT+GGG | - | chr3_2:60423554-60423573 | None:intergenic | 20.0% |
| !! | TATGGATAATAATGTAAAAG+TGG | - | chr3_2:60423555-60423574 | None:intergenic | 20.0% |
| !!! | ATATAGCATAAAGTCAATTT+TGG | + | chr3_2:60423617-60423636 | Msa0414730:intron | 20.0% |
| !!! | TTTTTAAAGAGTTGATTCAT+AGG | + | chr3_2:60423670-60423689 | Msa0414730:intron | 20.0% |
| !!! | TTTTAAAGAGTTGATTCATA+GGG | + | chr3_2:60423671-60423690 | Msa0414730:intron | 20.0% |
| ! | TTTCCATTATGAATCAAAAC+CGG | - | chr3_2:60417414-60417433 | None:intergenic | 25.0% |
| !!! | GGATCTTAAGTTAATTTGTT+GGG | + | chr3_2:60417618-60417637 | Msa0414730:intron | 25.0% |
| !!! | GATCTTAAGTTAATTTGTTG+GGG | + | chr3_2:60417619-60417638 | Msa0414730:intron | 25.0% |
| !!! | ATCTTAAGTTAATTTGTTGG+GGG | + | chr3_2:60417620-60417639 | Msa0414730:intron | 25.0% |
| ! | TGTATTTGATCATAACATTG+CGG | - | chr3_2:60417883-60417902 | None:intergenic | 25.0% |
| ! | TGATAAAAACTTACAAACAG+TGG | - | chr3_2:60417972-60417991 | None:intergenic | 25.0% |
| !!! | CATTTAAGTCCTACTTTTTT+TGG | + | chr3_2:60418055-60418074 | Msa0414730:intron | 25.0% |
| ! | TAAGGTTAACCAAAAAAAGT+AGG | - | chr3_2:60418067-60418086 | None:intergenic | 25.0% |
| !!! | ACTAATCTCTTTTGAGAATT+TGG | + | chr3_2:60418120-60418139 | Msa0414730:intron | 25.0% |
| ! | TTGATAAGATAGTTATTGGT+TGG | + | chr3_2:60418272-60418291 | Msa0414730:intron | 25.0% |
| ! | CATTATGGATAGAATATAGT+GGG | - | chr3_2:60418346-60418365 | None:intergenic | 25.0% |
| ! | ACATTATGGATAGAATATAG+TGG | - | chr3_2:60418347-60418366 | None:intergenic | 25.0% |
| ! | ATTAAGTGTGTTTGATTATG+CGG | + | chr3_2:60418453-60418472 | Msa0414730:intron | 25.0% |
| !!! | GTGGCTTTTTTTATTAGAAT+AGG | - | chr3_2:60418660-60418679 | None:intergenic | 25.0% |
| ! | TAAAAAAAGCCACGTATATT+CGG | + | chr3_2:60418667-60418686 | Msa0414730:intron | 25.0% |
| !!! | CTCTGTTTTTTGGAATAATA+TGG | + | chr3_2:60419259-60419278 | Msa0414730:intron | 25.0% |
| ! | TATTTATGGTTATGGAGAAT+AGG | - | chr3_2:60419388-60419407 | None:intergenic | 25.0% |
| ! | GCATATTGAAAATAGACTTA+AGG | + | chr3_2:60420018-60420037 | Msa0414730:intron | 25.0% |
| ! | CTTTCTTCTAATGATAGTTT+GGG | - | chr3_2:60420212-60420231 | None:intergenic | 25.0% |
| ! | TCTTTCTTCTAATGATAGTT+TGG | - | chr3_2:60420213-60420232 | None:intergenic | 25.0% |
| ! | TTCTTGAAGAATGGTATTAT+CGG | - | chr3_2:60420281-60420300 | None:intergenic | 25.0% |
| !!! | TATTTTTTCTAGTTCGTCAA+TGG | - | chr3_2:60420386-60420405 | None:intergenic | 25.0% |
| !!! | AACACTTCATTTTTAGTGAT+GGG | - | chr3_2:60420421-60420440 | None:intergenic | 25.0% |
| !!! | AAACACTTCATTTTTAGTGA+TGG | - | chr3_2:60420422-60420441 | None:intergenic | 25.0% |
| !!! | GTATCTTTTTCAAGCAATAT+TGG | + | chr3_2:60420497-60420516 | Msa0414730:intron | 25.0% |
| !! | TTTTATAGATGATGTTACAG+AGG | - | chr3_2:60420666-60420685 | None:intergenic | 25.0% |
| ! | CCCATTCTTAATAATCTTAT+TGG | + | chr3_2:60420718-60420737 | Msa0414730:intron | 25.0% |
| ! | GCCAATAAGATTATTAAGAA+TGG | - | chr3_2:60420722-60420741 | None:intergenic | 25.0% |
| !!! | AAGCTTTTGATAATGTTAGA+TGG | + | chr3_2:60420872-60420891 | Msa0414730:intron | 25.0% |
| !!! | AGCTTTTGATAATGTTAGAT+GGG | + | chr3_2:60420873-60420892 | Msa0414730:intron | 25.0% |
| ! | TTCCATAAAACTGATAAAGT+GGG | - | chr3_2:60420976-60420995 | None:intergenic | 25.0% |
| !!! | ACTTTATCAGTTTTATGGAA+CGG | + | chr3_2:60420976-60420995 | Msa0414730:intron | 25.0% |
| ! | TGCAGAGAATGAATAAATAA+GGG | - | chr3_2:60421059-60421078 | None:intergenic | 25.0% |
| ! | ATGCAGAGAATGAATAAATA+AGG | - | chr3_2:60421060-60421079 | None:intergenic | 25.0% |
| ! | TTATTTATTCATTCTCTGCA+TGG | + | chr3_2:60421059-60421078 | Msa0414730:intron | 25.0% |
| ! | CAAACAAATCAGTTAAGAAA+TGG | - | chr3_2:60421226-60421245 | None:intergenic | 25.0% |
| !!! | AGATTGTTGATTTTATCTTG+GGG | - | chr3_2:60421320-60421339 | None:intergenic | 25.0% |
| !!! | GAGATTGTTGATTTTATCTT+GGG | - | chr3_2:60421321-60421340 | None:intergenic | 25.0% |
| !!! | TGAGATTGTTGATTTTATCT+TGG | - | chr3_2:60421322-60421341 | None:intergenic | 25.0% |
| ! | TCATTGAAAAAATGCAAACA+AGG | + | chr3_2:60421438-60421457 | Msa0414730:intron | 25.0% |
| ! | TTTATTTGCATGTAGTAAGA+AGG | - | chr3_2:60421539-60421558 | None:intergenic | 25.0% |
| ! | CTTACTACATGCAAATAAAT+TGG | + | chr3_2:60421540-60421559 | Msa0414730:intron | 25.0% |
| !! | ATAGAGTCACAAATATTTTG+CGG | - | chr3_2:60421569-60421588 | None:intergenic | 25.0% |
| ! | AAATATTCTTCAAGCAAATG+CGG | + | chr3_2:60421811-60421830 | Msa0414730:intron | 25.0% |
| ! | TATCAGAGGTAATAATATCA+CGG | - | chr3_2:60422015-60422034 | None:intergenic | 25.0% |
| ! | AATGAGGAATTTGTATTTCT+CGG | - | chr3_2:60422269-60422288 | None:intergenic | 25.0% |
| ! | AGAAATACAAATTCCTCATT+TGG | + | chr3_2:60422269-60422288 | Msa0414730:intron | 25.0% |
| ! | TAAAAGATTTATTGGACTCA+CGG | + | chr3_2:60423004-60423023 | Msa0414730:intron | 25.0% |
| ! | CTAAGATTACAAAGGAAAAA+GGG | - | chr3_2:60423239-60423258 | None:intergenic | 25.0% |
| ! | AAAAAATTCAACCATGTTCT+AGG | + | chr3_2:60423273-60423292 | Msa0414730:intron | 25.0% |
| !!! | TTCACTTTTACACGAATAAT+GGG | - | chr3_2:60423329-60423348 | None:intergenic | 25.0% |
| !!! | ATTCACTTTTACACGAATAA+TGG | - | chr3_2:60423330-60423349 | None:intergenic | 25.0% |
| !! | TGTTTGATTTCATTTATGGA+GGG | - | chr3_2:60423455-60423474 | None:intergenic | 25.0% |
| !! | ATGTTTGATTTCATTTATGG+AGG | - | chr3_2:60423456-60423475 | None:intergenic | 25.0% |
| ! | ATGAAATCAAACATACACAT+AGG | + | chr3_2:60423462-60423481 | Msa0414730:intron | 25.0% |
| ! | GGTAAAAAGAAGTTTATAGA+AGG | + | chr3_2:60423786-60423805 | Msa0414730:CDS | 25.0% |
| !! | TTTTACACTTACGAGATATA+TGG | + | chr3_2:60423906-60423925 | Msa0414730:CDS | 25.0% |
| ! | TTTACACTTACGAGATATAT+GGG | + | chr3_2:60423907-60423926 | Msa0414730:CDS | 25.0% |
| ! | TTGTTTATCAGCTTATTAGA+TGG | - | chr3_2:60424236-60424255 | None:intergenic | 25.0% |
| ! | ATAAGCTGATAAACAAAAGA+AGG | + | chr3_2:60424240-60424259 | Msa0414730:three_prime_UTR | 25.0% |
| !! | TTTGCTTTTAGAAAAGAACC+CGG | + | chr3_2:60417374-60417393 | Msa0414730:CDS | 30.0% |
| TTCCATTATGAATCAAAACC+GGG | - | chr3_2:60417413-60417432 | None:intergenic | 30.0% | |
| ! | TAGCTTGTGATCGTTTATAA+GGG | - | chr3_2:60417514-60417533 | None:intergenic | 30.0% |
| !! | TTAGCTTGTGATCGTTTATA+AGG | - | chr3_2:60417515-60417534 | None:intergenic | 30.0% |
| !! | CGGATCTTAAGTTAATTTGT+TGG | + | chr3_2:60417617-60417636 | Msa0414730:intron | 30.0% |
| ACAATTAATAACCATCCTAG+TGG | + | chr3_2:60417690-60417709 | Msa0414730:intron | 30.0% | |
| TTCTATCAATTCTTACCACT+AGG | - | chr3_2:60417708-60417727 | None:intergenic | 30.0% | |
| AGAATTGATAGAAAGTAGCA+AGG | + | chr3_2:60417715-60417734 | Msa0414730:intron | 30.0% | |
| GAATTGATAGAAAGTAGCAA+GGG | + | chr3_2:60417716-60417735 | Msa0414730:intron | 30.0% | |
| TATTGTATATAAGGGAAACC+TGG | + | chr3_2:60417908-60417927 | Msa0414730:intron | 30.0% | |
| ATTGTATATAAGGGAAACCT+GGG | + | chr3_2:60417909-60417928 | Msa0414730:intron | 30.0% | |
| TAAAAACTTACAAACAGTGG+CGG | - | chr3_2:60417969-60417988 | None:intergenic | 30.0% | |
| TTTATGTAGTTTAGATTGGG+AGG | - | chr3_2:60418008-60418027 | None:intergenic | 30.0% | |
| GATTAGTAAGAAAAAATCGG+AGG | - | chr3_2:60418107-60418126 | None:intergenic | 30.0% | |
| TTTCTGAATATAGTTGAGAG+TGG | - | chr3_2:60418167-60418186 | None:intergenic | 30.0% | |
| !!! | GAATATAGTGGGTTACATTT+TGG | - | chr3_2:60418335-60418354 | None:intergenic | 30.0% |
| !! | GATGAAGTGTTGTTAGTAAT+TGG | - | chr3_2:60418834-60418853 | None:intergenic | 30.0% |
| !!! | TTGTTGTGACTGTTTTTGTT+AGG | - | chr3_2:60418924-60418943 | None:intergenic | 30.0% |
| TGATCAAGATCAAAATCATG+CGG | + | chr3_2:60419013-60419032 | Msa0414730:intron | 30.0% | |
| TTGGCTTCAATAATGTGTAT+AGG | - | chr3_2:60419293-60419312 | None:intergenic | 30.0% | |
| ATACACATTATTGAAGCCAA+CGG | + | chr3_2:60419293-60419312 | Msa0414730:intron | 30.0% | |
| ACGGCTAATATTTATGGTTA+TGG | - | chr3_2:60419396-60419415 | None:intergenic | 30.0% | |
| ATAACCATAAATATTAGCCG+TGG | + | chr3_2:60419395-60419414 | Msa0414730:intron | 30.0% | |
| !!! | CAAGTTTTTTAGAGAGGATA+TGG | - | chr3_2:60419697-60419716 | None:intergenic | 30.0% |
| !!! | TTCTGTCAAGTTTTTTAGAG+AGG | - | chr3_2:60419703-60419722 | None:intergenic | 30.0% |
| !! | TTTTTCTTGAACCTCTGAAA+GGG | - | chr3_2:60419948-60419967 | None:intergenic | 30.0% |
| ! | ATTTTTCTTGAACCTCTGAA+AGG | - | chr3_2:60419949-60419968 | None:intergenic | 30.0% |
| ! | ATTTTCAACCACGAAGTTTT+CGG | + | chr3_2:60419974-60419993 | Msa0414730:intron | 30.0% |
| AAATATTACCGAAAACTTCG+TGG | - | chr3_2:60419985-60420004 | None:intergenic | 30.0% | |
| ! | CAACTCTCTCGAAATAATTT+TGG | - | chr3_2:60420048-60420067 | None:intergenic | 30.0% |
| ACCAAAAATCTAGAGAACAA+TGG | + | chr3_2:60420149-60420168 | Msa0414730:intron | 30.0% | |
| CCAAAAATCTAGAGAACAAT+GGG | + | chr3_2:60420150-60420169 | Msa0414730:intron | 30.0% | |
| AAGATACAATGAAAACCATC+TGG | - | chr3_2:60420484-60420503 | None:intergenic | 30.0% | |
| AAGCAATATTGGCATATAGT+TGG | + | chr3_2:60420508-60420527 | Msa0414730:intron | 30.0% | |
| ! | TGGAGATGATATTTTTCATC+TGG | + | chr3_2:60420528-60420547 | Msa0414730:intron | 30.0% |
| !! | ATGAGAGTATTTGAAATCTC+CGG | - | chr3_2:60420586-60420605 | None:intergenic | 30.0% |
| !! | TGATAACTCTATTGTTTTGC+AGG | + | chr3_2:60420780-60420799 | Msa0414730:intron | 30.0% |
| GTTCCATAAAACTGATAAAG+TGG | - | chr3_2:60420977-60420996 | None:intergenic | 30.0% | |
| GCAGAGAATGAATAAATAAG+GGG | - | chr3_2:60421058-60421077 | None:intergenic | 30.0% | |
| AAGAGTAAATGTGAAATCCT+CGG | - | chr3_2:60421159-60421178 | None:intergenic | 30.0% | |
| GAATTGTGAGTTATTTGCTT+TGG | - | chr3_2:60421204-60421223 | None:intergenic | 30.0% | |
| TGAAAAAATGCAAACAAGGT+TGG | + | chr3_2:60421442-60421461 | Msa0414730:intron | 30.0% | |
| ! | CAACAAGAAACTTTATTTGG+CGG | + | chr3_2:60421597-60421616 | Msa0414730:intron | 30.0% |
| ! | AACAAGAAACTTTATTTGGC+GGG | + | chr3_2:60421598-60421617 | Msa0414730:intron | 30.0% |
| !! | TAATAACAAGGGTATTCACT+TGG | + | chr3_2:60421625-60421644 | Msa0414730:intron | 30.0% |
| ATCACTATCCCAAAGAATTA+TGG | + | chr3_2:60421662-60421681 | Msa0414730:intron | 30.0% | |
| CATGCAAATATTTGTCTTCT+TGG | + | chr3_2:60421710-60421729 | Msa0414730:intron | 30.0% | |
| !!! | CTGATGAGTATTTTGATGAA+AGG | - | chr3_2:60421787-60421806 | None:intergenic | 30.0% |
| CTTTCATCAAAATACTCATC+AGG | + | chr3_2:60421785-60421804 | Msa0414730:intron | 30.0% | |
| CCAAATGAAAATATCATCGA+CGG | - | chr3_2:60422122-60422141 | None:intergenic | 30.0% | |
| ! | CGTCGATGATATTTTCATTT+GGG | + | chr3_2:60422120-60422139 | Msa0414730:intron | 30.0% |
| ATGAGGAATTTGTATTTCTC+GGG | - | chr3_2:60422268-60422287 | None:intergenic | 30.0% | |
| ACAATTGTTTGCGAAGAAAT+GGG | - | chr3_2:60422461-60422480 | None:intergenic | 30.0% | |
| CAAACAATTGTGCTTATGAT+TGG | + | chr3_2:60422470-60422489 | Msa0414730:intron | 30.0% | |
| TGGATTAAAGTTAATGCCAA+AGG | + | chr3_2:60422490-60422509 | Msa0414730:intron | 30.0% | |
| CTTTCTGTTAATCTCATCAT+AGG | + | chr3_2:60422937-60422956 | Msa0414730:intron | 30.0% | |
| !! | ATCTTTCACACTTTTAGAGA+AGG | + | chr3_2:60423036-60423055 | Msa0414730:intron | 30.0% |
| !! | TCTTTCACACTTTTAGAGAA+GGG | + | chr3_2:60423037-60423056 | Msa0414730:intron | 30.0% |
| CAAGTAACAATCATTTGATG+AGG | - | chr3_2:60423097-60423116 | None:intergenic | 30.0% | |
| CTCATCAAATGATTGTTACT+TGG | + | chr3_2:60423095-60423114 | Msa0414730:intron | 30.0% | |
| GCTAAGATTACAAAGGAAAA+AGG | - | chr3_2:60423240-60423259 | None:intergenic | 30.0% | |
| ! | GTTTGATTTCATTTATGGAG+GGG | - | chr3_2:60423454-60423473 | None:intergenic | 30.0% |
| ! | GTATCATGGCTTAATTTTGT+TGG | + | chr3_2:60423693-60423712 | Msa0414730:intron | 30.0% |
| TGTTGGATTCTAATTCATGT+AGG | + | chr3_2:60423710-60423729 | Msa0414730:intron | 30.0% | |
| AAGTCATCTCCATCAAAATA+TGG | - | chr3_2:60423846-60423865 | None:intergenic | 30.0% | |
| !!! | TATTTTGATGGAGATGACTT+TGG | + | chr3_2:60423846-60423865 | Msa0414730:CDS | 30.0% |
| !! | ATTTTGATGGAGATGACTTT+GGG | + | chr3_2:60423847-60423866 | Msa0414730:CDS | 30.0% |
| ! | CAAAACCATAGATTTTGTGT+GGG | - | chr3_2:60424022-60424041 | None:intergenic | 30.0% |
| ATGCAATATAAACAAAGCCA+TGG | + | chr3_2:60424044-60424063 | Msa0414730:CDS | 30.0% | |
| !! | AAAATCGCTTTGGAAGAGAA+GGG | + | chr3_2:60417309-60417328 | Msa0414730:CDS | 35.0% |
| !!! | ATCCCGGTTTTGATTCATAA+TGG | + | chr3_2:60417408-60417427 | Msa0414730:CDS | 35.0% |
| ! | AACGATCACAAGCTAAGTTT+TGG | + | chr3_2:60417519-60417538 | Msa0414730:intron | 35.0% |
| ! | ACGATCACAAGCTAAGTTTT+GGG | + | chr3_2:60417520-60417539 | Msa0414730:intron | 35.0% |
| ATCAATTCTTACCACTAGGA+TGG | - | chr3_2:60417704-60417723 | None:intergenic | 35.0% | |
| TTGTATATAAGGGAAACCTG+GGG | + | chr3_2:60417910-60417929 | Msa0414730:intron | 35.0% | |
| GATACTTCACACTGATAGTA+AGG | - | chr3_2:60418085-60418104 | None:intergenic | 35.0% | |
| ! | AATTTGGCTAGCCATATTTG+TGG | + | chr3_2:60418136-60418155 | Msa0414730:intron | 35.0% |
| ! | ATTTGGCTAGCCATATTTGT+GGG | + | chr3_2:60418137-60418156 | Msa0414730:intron | 35.0% |
| !! | GTTAGTAATTGGTGGCTTTT+TGG | - | chr3_2:60418823-60418842 | None:intergenic | 35.0% |
| !! | GAAGTGTTGTTAGTAATTGG+TGG | - | chr3_2:60418831-60418850 | None:intergenic | 35.0% |
| ! | GTTTTCATGTGTTGTAGCAA+GGG | - | chr3_2:60418967-60418986 | None:intergenic | 35.0% |
| ! | TGTTTTCATGTGTTGTAGCA+AGG | - | chr3_2:60418968-60418987 | None:intergenic | 35.0% |
| GACACTTGAAAGATTTGATC+AGG | + | chr3_2:60419180-60419199 | Msa0414730:intron | 35.0% | |
| GAATAGGTTATAGTCAAGGA+TGG | - | chr3_2:60419372-60419391 | None:intergenic | 35.0% | |
| TGGAGAATAGGTTATAGTCA+AGG | - | chr3_2:60419376-60419395 | None:intergenic | 35.0% | |
| CATGAATTGAGATAAGTGAG+CGG | - | chr3_2:60419603-60419622 | None:intergenic | 35.0% | |
| TATGGATGCCATTATTGTTC+CGG | - | chr3_2:60419679-60419698 | None:intergenic | 35.0% | |
| CTCTCATAACAACAATGTCA+CGG | + | chr3_2:60419919-60419938 | Msa0414730:intron | 35.0% | |
| GAAAACTTCGTGGTTGAAAA+TGG | - | chr3_2:60419975-60419994 | None:intergenic | 35.0% | |
| !!! | CTGCAATTCTTTTTCGAGAA+GGG | - | chr3_2:60420086-60420105 | None:intergenic | 35.0% |
| TTCTCGAAAAAGAATTGCAG+CGG | + | chr3_2:60420086-60420105 | Msa0414730:intron | 35.0% | |
| ! | AAAGCATTTCTTCTTGGAAG+AGG | - | chr3_2:60420126-60420145 | None:intergenic | 35.0% |
| TCTTCCAAGAAGAAATGCTT+TGG | + | chr3_2:60420125-60420144 | Msa0414730:intron | 35.0% | |
| ! | CCCATTGTTCTCTAGATTTT+TGG | - | chr3_2:60420153-60420172 | None:intergenic | 35.0% |
| ! | CATTTGGTAGTTGGAGTTTA+TGG | - | chr3_2:60420246-60420265 | None:intergenic | 35.0% |
| CATAAACTCCAACTACCAAA+TGG | + | chr3_2:60420244-60420263 | Msa0414730:intron | 35.0% | |
| TTGAAGAATGGTATTATCGG+AGG | - | chr3_2:60420278-60420297 | None:intergenic | 35.0% | |
| !!! | TTTTCTAGTTCGTCAATGGT+GGG | - | chr3_2:60420382-60420401 | None:intergenic | 35.0% |
| !!! | TTTTTCTAGTTCGTCAATGG+TGG | - | chr3_2:60420383-60420402 | None:intergenic | 35.0% |
| !!! | TTCATTTTTAGTGATGGGTG+AGG | - | chr3_2:60420416-60420435 | None:intergenic | 35.0% |
| CTGAAATCTTTGTAGGTGAT+GGG | - | chr3_2:60420634-60420653 | None:intergenic | 35.0% | |
| ! | TCTGAAATCTTTGTAGGTGA+TGG | - | chr3_2:60420635-60420654 | None:intergenic | 35.0% |
| ! | GATAGGTCTGAAATCTTTGT+AGG | - | chr3_2:60420641-60420660 | None:intergenic | 35.0% |
| GAAGAAAACTGCTTTGGTAT+TGG | - | chr3_2:60420744-60420763 | None:intergenic | 35.0% | |
| AGAAGATCCAAGAAGAAGAA+GGG | + | chr3_2:60420820-60420839 | Msa0414730:intron | 35.0% | |
| ACAATGCATGATGAGTTTGA+TGG | - | chr3_2:60420944-60420963 | None:intergenic | 35.0% | |
| ! | CACCCACTTTATCAGTTTTA+TGG | + | chr3_2:60420971-60420990 | Msa0414730:intron | 35.0% |
| TGAATAAATAAGGGGAGAGT+GGG | - | chr3_2:60421050-60421069 | None:intergenic | 35.0% | |
| ATGAATAAATAAGGGGAGAG+TGG | - | chr3_2:60421051-60421070 | None:intergenic | 35.0% | |
| ! | GAACCGATTCAAATCACTAA+CGG | + | chr3_2:60421129-60421148 | Msa0414730:intron | 35.0% |
| ATTTGTTTGACAGATTCAGC+AGG | + | chr3_2:60421237-60421256 | Msa0414730:intron | 35.0% | |
| TTTGTTTGACAGATTCAGCA+GGG | + | chr3_2:60421238-60421257 | Msa0414730:intron | 35.0% | |
| AACAATCTCACAGCTATATC+TGG | + | chr3_2:60421332-60421351 | Msa0414730:intron | 35.0% | |
| ! | AAGTTGAAGTCGCTTCTTTT+CGG | - | chr3_2:60421416-60421435 | None:intergenic | 35.0% |
| TTGCATGTAGTAAGAAGGAA+TGG | - | chr3_2:60421534-60421553 | None:intergenic | 35.0% | |
| ! | ACAAGAAACTTTATTTGGCG+GGG | + | chr3_2:60421599-60421618 | Msa0414730:intron | 35.0% |
| ACTATCCCAAAGAATTATGG+TGG | + | chr3_2:60421665-60421684 | Msa0414730:intron | 35.0% | |
| CCAAACCACCATAATTCTTT+GGG | - | chr3_2:60421673-60421692 | None:intergenic | 35.0% | |
| CCAAAGAATTATGGTGGTTT+GGG | + | chr3_2:60421671-60421690 | Msa0414730:intron | 35.0% | |
| ! | TCTTCTTGGAAAGCTAGTTT+GGG | + | chr3_2:60421724-60421743 | Msa0414730:intron | 35.0% |
| TCCAATCCATGAATAAGCTT+TGG | + | chr3_2:60421753-60421772 | Msa0414730:intron | 35.0% | |
| CCAATCCATGAATAAGCTTT+GGG | + | chr3_2:60421754-60421773 | Msa0414730:intron | 35.0% | |
| ! | TATAAAGTGCTTGAGTGTGA+GGG | - | chr3_2:60422039-60422058 | None:intergenic | 35.0% |
| ATGAAAATATCATCGACGGT+TGG | - | chr3_2:60422118-60422137 | None:intergenic | 35.0% | |
| ! | CCGTCGATGATATTTTCATT+TGG | + | chr3_2:60422119-60422138 | Msa0414730:intron | 35.0% |
| ! | ATTTGGGACCATAACAAGAA+CGG | + | chr3_2:60422136-60422155 | Msa0414730:intron | 35.0% |
| CAACTAAAAGTGGCTATTCA+TGG | + | chr3_2:60422167-60422186 | Msa0414730:intron | 35.0% | |
| ATACAAATTCCTCATTTGGC+TGG | + | chr3_2:60422273-60422292 | Msa0414730:intron | 35.0% | |
| !!! | GCACGTTTTCTAAAACTGTT+TGG | + | chr3_2:60422413-60422432 | Msa0414730:intron | 35.0% |
| AAAACTGTTTGGCAGCAATT+CGG | + | chr3_2:60422424-60422443 | Msa0414730:intron | 35.0% | |
| CACAATTGTTTGCGAAGAAA+TGG | - | chr3_2:60422462-60422481 | None:intergenic | 35.0% | |
| GAAGAATGCAAGTAGAATCT+TGG | - | chr3_2:60422831-60422850 | None:intergenic | 35.0% | |
| TGAACTAACAGCAATTCACA+AGG | + | chr3_2:60422855-60422874 | Msa0414730:intron | 35.0% | |
| GAACTAACAGCAATTCACAA+GGG | + | chr3_2:60422856-60422875 | Msa0414730:intron | 35.0% | |
| !! | TGATGGTTTAGTTTGCTTCT+CGG | + | chr3_2:60422906-60422925 | Msa0414730:intron | 35.0% |
| TGTTAATCTCATCATAGGAG+CGG | + | chr3_2:60422942-60422961 | Msa0414730:intron | 35.0% | |
| AAGGGAAACAAACAGAAACA+AGG | - | chr3_2:60423221-60423240 | None:intergenic | 35.0% | |
| ! | AGTTGATTCATAGGGTATCA+TGG | + | chr3_2:60423679-60423698 | Msa0414730:intron | 35.0% |
| TGACTTTGGGTATGATGATT+TGG | + | chr3_2:60423860-60423879 | Msa0414730:CDS | 35.0% | |
| GTGTAAAACCAACTAGTGAA+GGG | - | chr3_2:60423894-60423913 | None:intergenic | 35.0% | |
| AGTGTAAAACCAACTAGTGA+AGG | - | chr3_2:60423895-60423914 | None:intergenic | 35.0% | |
| ! | CTCTTTTTCCATACACCTTT+TGG | - | chr3_2:60423976-60423995 | None:intergenic | 35.0% |
| ! | GCAAAACCATAGATTTTGTG+TGG | - | chr3_2:60424023-60424042 | None:intergenic | 35.0% |
| !! | GAAAATCGCTTTGGAAGAGA+AGG | + | chr3_2:60417308-60417327 | Msa0414730:CDS | 40.0% |
| ! | ACCGGGATCTTTTTGTAAAC+CGG | - | chr3_2:60417396-60417415 | None:intergenic | 40.0% |
| TCGAGTACATTGATGAAGCT+TGG | + | chr3_2:60417460-60417479 | Msa0414730:CDS | 40.0% | |
| GATCGTTTATAAGGGTCACA+GGG | - | chr3_2:60417506-60417525 | None:intergenic | 40.0% | |
| TGATCGTTTATAAGGGTCAC+AGG | - | chr3_2:60417507-60417526 | None:intergenic | 40.0% | |
| ! | CGATCACAAGCTAAGTTTTG+GGG | + | chr3_2:60417521-60417540 | Msa0414730:intron | 40.0% |
| AGTGATGTGTTTGTAAGCAG+TGG | + | chr3_2:60417594-60417613 | Msa0414730:intron | 40.0% | |
| GATAGAAAGTAGCAAGGGAA+TGG | + | chr3_2:60417721-60417740 | Msa0414730:intron | 40.0% | |
| ! | TCGCGACCTATAGGATTTTA+TGG | + | chr3_2:60417835-60417854 | Msa0414730:intron | 40.0% |
| TTTGATCATAACATTGCGGC+TGG | - | chr3_2:60417879-60417898 | None:intergenic | 40.0% | |
| TGTATATAAGGGAAACCTGG+GGG | + | chr3_2:60417911-60417930 | Msa0414730:intron | 40.0% | |
| TGTAGTTTAGATTGGGAGGT+TGG | - | chr3_2:60418004-60418023 | None:intergenic | 40.0% | |
| ! | TTTGGCTAGCCATATTTGTG+GGG | + | chr3_2:60418138-60418157 | Msa0414730:intron | 40.0% |
| AAAGCAAGAGTCTTACCCTT+GGG | - | chr3_2:60418583-60418602 | None:intergenic | 40.0% | |
| TAAAGCAAGAGTCTTACCCT+TGG | - | chr3_2:60418584-60418603 | None:intergenic | 40.0% | |
| AAGGGTAAGACTCTTGCTTT+AGG | + | chr3_2:60418583-60418602 | Msa0414730:intron | 40.0% | |
| AAATGCGACACATACACACA+TGG | + | chr3_2:60418785-60418804 | Msa0414730:intron | 40.0% | |
| AATGCGACACATACACACAT+GGG | + | chr3_2:60418786-60418805 | Msa0414730:intron | 40.0% | |
| !! | AGTAATTGGTGGCTTTTTGG+TGG | - | chr3_2:60418820-60418839 | None:intergenic | 40.0% |
| !! | GATGTAATTGGTTCGGTCAT+GGG | - | chr3_2:60418876-60418895 | None:intergenic | 40.0% |
| AGGCATGGATGTAATTGGTT+CGG | - | chr3_2:60418883-60418902 | None:intergenic | 40.0% | |
| GGAATAGGCATGGATGTAAT+TGG | - | chr3_2:60418888-60418907 | None:intergenic | 40.0% | |
| GAGAGTTATTGGAATAGGCA+TGG | - | chr3_2:60418898-60418917 | None:intergenic | 40.0% | |
| TTGTTAGGCTGGAGAGTTAT+TGG | - | chr3_2:60418909-60418928 | None:intergenic | 40.0% | |
| !!! | TGTGACTGTTTTTGTTAGGC+TGG | - | chr3_2:60418920-60418939 | None:intergenic | 40.0% |
| TGAAAATGACCTCAACGAAG+AGG | + | chr3_2:60419037-60419056 | Msa0414730:intron | 40.0% | |
| ATAACATGTCCTCTTCGTTG+AGG | - | chr3_2:60419049-60419068 | None:intergenic | 40.0% | |
| ! | TTGATGGTACAAAGAGAGGA+GGG | - | chr3_2:60419078-60419097 | None:intergenic | 40.0% |
| !! | GTAGTTGATGGTACAAAGAG+AGG | - | chr3_2:60419082-60419101 | None:intergenic | 40.0% |
| CCATTACACACAGTAGTTGA+TGG | - | chr3_2:60419094-60419113 | None:intergenic | 40.0% | |
| CCATCAACTACTGTGTGTAA+TGG | + | chr3_2:60419091-60419110 | Msa0414730:intron | 40.0% | |
| TCAATGATAGCCATGAAGGT+CGG | - | chr3_2:60419215-60419234 | None:intergenic | 40.0% | |
| GGTTTCAATGATAGCCATGA+AGG | - | chr3_2:60419219-60419238 | None:intergenic | 40.0% | |
| AAAACAGAGAGCTTTGCGAA+GGG | - | chr3_2:60419248-60419267 | None:intergenic | 40.0% | |
| AAAAACAGAGAGCTTTGCGA+AGG | - | chr3_2:60419249-60419268 | None:intergenic | 40.0% | |
| !!! | TCGCAAAGCTCTCTGTTTTT+TGG | + | chr3_2:60419249-60419268 | Msa0414730:intron | 40.0% |
| TAGGTTATAGTCAAGGATGG+TGG | - | chr3_2:60419369-60419388 | None:intergenic | 40.0% | |
| GTTGCCACGGCTAATATTTA+TGG | - | chr3_2:60419402-60419421 | None:intergenic | 40.0% | |
| TGAGGTAAGACCAAAGGTTA+GGG | - | chr3_2:60419475-60419494 | None:intergenic | 40.0% | |
| TGTTTGTGAGGTAAGACCAA+AGG | - | chr3_2:60419481-60419500 | None:intergenic | 40.0% | |
| TTGCTTGATCTTACAACCAC+AGG | + | chr3_2:60419635-60419654 | Msa0414730:intron | 40.0% | |
| ! | TTTTCCGGAAGCTTTTGTTG+AGG | + | chr3_2:60419751-60419770 | Msa0414730:intron | 40.0% |
| CTATCCAAGCTGCTTCAAAA+CGG | - | chr3_2:60419859-60419878 | None:intergenic | 40.0% | |
| ! | ATTGTTGTTATGAGAGAGCC+AGG | - | chr3_2:60419915-60419934 | None:intergenic | 40.0% |
| TCATAACAACAATGTCACGG+CGG | + | chr3_2:60419922-60419941 | Msa0414730:intron | 40.0% | |
| AACTTCGTGGTTGAAAATGG+TGG | - | chr3_2:60419972-60419991 | None:intergenic | 40.0% | |
| !!! | ATTCTTTTTCGAGAAGGGTG+TGG | - | chr3_2:60420081-60420100 | None:intergenic | 40.0% |
| !!! | GCTGCAATTCTTTTTCGAGA+AGG | - | chr3_2:60420087-60420106 | None:intergenic | 40.0% |
| TCTCGAAAAAGAATTGCAGC+GGG | + | chr3_2:60420087-60420106 | Msa0414730:intron | 40.0% | |
| TTTCTTCTTGGAAGAGGATG+TGG | - | chr3_2:60420120-60420139 | None:intergenic | 40.0% | |
| ! | GGTACCAAAGCATTTCTTCT+TGG | - | chr3_2:60420132-60420151 | None:intergenic | 40.0% |
| AGAGAACAATGGGTCAAGTT+CGG | + | chr3_2:60420160-60420179 | Msa0414730:intron | 40.0% | |
| GATAGTTTGGGCATGAAAGA+AGG | - | chr3_2:60420200-60420219 | None:intergenic | 40.0% | |
| TCCAACTACCAAATGGCATA+TGG | + | chr3_2:60420251-60420270 | Msa0414730:intron | 40.0% | |
| ! | TCCATATGCCATTTGGTAGT+TGG | - | chr3_2:60420255-60420274 | None:intergenic | 40.0% |
| TTGGGCTTCTTCTTGAAGAA+TGG | - | chr3_2:60420290-60420309 | None:intergenic | 40.0% | |
| !! | TTTAGTGATGGGTGAGGTTA+GGG | - | chr3_2:60420410-60420429 | None:intergenic | 40.0% |
| !!! | TTTTAGTGATGGGTGAGGTT+AGG | - | chr3_2:60420411-60420430 | None:intergenic | 40.0% |
| ATCAAAGTGACCTGTTTGGA+AGG | - | chr3_2:60420563-60420582 | None:intergenic | 40.0% | |
| !!! | GTGATGGGCGAATCTATTTT+GGG | - | chr3_2:60420619-60420638 | None:intergenic | 40.0% |
| ATGATGTTACAGAGGCTGAT+AGG | - | chr3_2:60420658-60420677 | None:intergenic | 40.0% | |
| ! | TACCAAAGCAGTTTTCTTCC+TGG | + | chr3_2:60420745-60420764 | Msa0414730:intron | 40.0% |
| TACCAGGAAGAAAACTGCTT+TGG | - | chr3_2:60420750-60420769 | None:intergenic | 40.0% | |
| ! | AAAGCAGTTTTCTTCCTGGT+AGG | + | chr3_2:60420749-60420768 | Msa0414730:intron | 40.0% |
| ! | AAGCAGTTTTCTTCCTGGTA+GGG | + | chr3_2:60420750-60420769 | Msa0414730:intron | 40.0% |
| GAGAAGATCCAAGAAGAAGA+AGG | + | chr3_2:60420819-60420838 | Msa0414730:intron | 40.0% | |
| !! | ATGAGTTTGATGGTGATGTC+CGG | - | chr3_2:60420934-60420953 | None:intergenic | 40.0% |
| CCTCCGTTAGTGATTTGAAT+CGG | - | chr3_2:60421135-60421154 | None:intergenic | 40.0% | |
| CGATTCAAATCACTAACGGA+GGG | + | chr3_2:60421133-60421152 | Msa0414730:intron | 40.0% | |
| ACGTCTCTTGGAAAATACCT+CGG | + | chr3_2:60421368-60421387 | Msa0414730:intron | 40.0% | |
| ! | AGTTGAAGTCGCTTCTTTTC+GGG | - | chr3_2:60421415-60421434 | None:intergenic | 40.0% |
| TACCTGTTCTGTTGAGAAGA+CGG | - | chr3_2:60421481-60421500 | None:intergenic | 40.0% | |
| TCTCAACAGAACAGGTAGAT+TGG | + | chr3_2:60421484-60421503 | Msa0414730:intron | 40.0% | |
| ! | AGGGTATTCACTTGGTAAGT+TGG | + | chr3_2:60421633-60421652 | Msa0414730:intron | 40.0% |
| CCCAAAGAATTATGGTGGTT+TGG | + | chr3_2:60421670-60421689 | Msa0414730:intron | 40.0% | |
| CCCAAACCACCATAATTCTT+TGG | - | chr3_2:60421674-60421693 | None:intergenic | 40.0% | |
| ! | TGGTGGTTTGGGTATTAGTA+CGG | + | chr3_2:60421682-60421701 | Msa0414730:intron | 40.0% |
| GTCTTCTTGGAAAGCTAGTT+TGG | + | chr3_2:60421723-60421742 | Msa0414730:intron | 40.0% | |
| ! | TGGAAAGCTAGTTTGGGATT+TGG | + | chr3_2:60421730-60421749 | Msa0414730:intron | 40.0% |
| CCCAAAGCTTATTCATGGAT+TGG | - | chr3_2:60421757-60421776 | None:intergenic | 40.0% | |
| ATGCACCCAAAGCTTATTCA+TGG | - | chr3_2:60421762-60421781 | None:intergenic | 40.0% | |
| GCCAAAGATATGCTCAAAAG+CGG | + | chr3_2:60421872-60421891 | Msa0414730:intron | 40.0% | |
| CCAAAGATATGCTCAAAAGC+GGG | + | chr3_2:60421873-60421892 | Msa0414730:intron | 40.0% | |
| ! | GTATAAAGTGCTTGAGTGTG+AGG | - | chr3_2:60422040-60422059 | None:intergenic | 40.0% |
| ! | CGGTTGGATTGAATTTTGCT+TGG | - | chr3_2:60422102-60422121 | None:intergenic | 40.0% |
| ! | TTTGGGACCATAACAAGAAC+GGG | + | chr3_2:60422137-60422156 | Msa0414730:intron | 40.0% |
| ATCATTCTTGGAGTTGGGTT+TGG | + | chr3_2:60422230-60422249 | Msa0414730:intron | 40.0% | |
| ACATCTTTCTTGCTTGTCTC+TGG | + | chr3_2:60422524-60422543 | Msa0414730:intron | 40.0% | |
| TGTGCATCAACAACGAAACA+TGG | + | chr3_2:60422572-60422591 | Msa0414730:intron | 40.0% | |
| TGCAAGTAGAATCTTGGATC+CGG | - | chr3_2:60422825-60422844 | None:intergenic | 40.0% | |
| TTCTAAGTTCCACGTCTATG+CGG | + | chr3_2:60422966-60422985 | Msa0414730:intron | 40.0% | |
| AGCAAGTGTATGAGATCATG+GGG | - | chr3_2:60423135-60423154 | None:intergenic | 40.0% | |
| CAGCAAGTGTATGAGATCAT+GGG | - | chr3_2:60423136-60423155 | None:intergenic | 40.0% | |
| ! | AACAAGAAACACAGAGCACT+AGG | - | chr3_2:60423193-60423212 | None:intergenic | 40.0% |
| CTTTCATGTGATAGCCACTT+GGG | - | chr3_2:60423585-60423604 | None:intergenic | 40.0% | |
| TGTAGGTATACAGCATTCGA+AGG | + | chr3_2:60423727-60423746 | Msa0414730:intron | 40.0% | |
| ATTCGAAGGAAGCTATGGAA+AGG | + | chr3_2:60423741-60423760 | Msa0414730:CDS | 40.0% | |
| AAGGAAGCTATGGAAAGGAA+AGG | + | chr3_2:60423746-60423765 | Msa0414730:CDS | 40.0% | |
| AGGAAAGGTTGAAGAACAAG+AGG | + | chr3_2:60423761-60423780 | Msa0414730:CDS | 40.0% | |
| AAGGTTGAAGAACAAGAGGA+AGG | + | chr3_2:60423765-60423784 | Msa0414730:CDS | 40.0% | |
| !! | GGAGACAAGCCATATTTTGA+TGG | + | chr3_2:60423834-60423853 | Msa0414730:CDS | 40.0% |
| CTCTTATACCCTTCACTAGT+TGG | + | chr3_2:60423883-60423902 | Msa0414730:CDS | 40.0% | |
| GTGTATGGAAAAAGAGAGTG+TGG | + | chr3_2:60423980-60423999 | Msa0414730:CDS | 40.0% | |
| ACGATCTCTATTCAAGTCCA+TGG | - | chr3_2:60424064-60424083 | None:intergenic | 40.0% | |
| TGGACTTGAATAGAGATCGT+TGG | + | chr3_2:60424064-60424083 | Msa0414730:exon | 40.0% | |
| GGACTTGAATAGAGATCGTT+GGG | + | chr3_2:60424065-60424084 | Msa0414730:exon | 40.0% | |
| GACTTGAATAGAGATCGTTG+GGG | + | chr3_2:60424066-60424085 | Msa0414730:exon | 40.0% | |
| ! | CCGGGATCTTTTTGTAAACC+GGG | - | chr3_2:60417395-60417414 | None:intergenic | 45.0% |
| CCCGGTTTACAAAAAGATCC+CGG | + | chr3_2:60417392-60417411 | Msa0414730:CDS | 45.0% | |
| GATGTGTTTGTAAGCAGTGG+CGG | + | chr3_2:60417597-60417616 | Msa0414730:intron | 45.0% | |
| AGAAAGTAGCAAGGGAATGG+CGG | + | chr3_2:60417724-60417743 | Msa0414730:intron | 45.0% | |
| ! | GGGGTGCCATAAAATCCTAT+AGG | - | chr3_2:60417844-60417863 | None:intergenic | 45.0% |
| !! | AACAGTGGCGGATCTCTTTA+GGG | - | chr3_2:60417957-60417976 | None:intergenic | 45.0% |
| !! | AAACAGTGGCGGATCTCTTT+AGG | - | chr3_2:60417958-60417977 | None:intergenic | 45.0% |
| ATTATTGCAGTGTCTGCCCA+AGG | + | chr3_2:60418564-60418583 | Msa0414730:intron | 45.0% | |
| TTATTGCAGTGTCTGCCCAA+GGG | + | chr3_2:60418565-60418584 | Msa0414730:intron | 45.0% | |
| TTTGTGGTCATGCCAAGGAT+TGG | - | chr3_2:60418768-60418787 | None:intergenic | 45.0% | |
| GTGTGTATGTGTCGCATTTG+TGG | - | chr3_2:60418784-60418803 | None:intergenic | 45.0% | |
| !! | GGATGTAATTGGTTCGGTCA+TGG | - | chr3_2:60418877-60418896 | None:intergenic | 45.0% |
| GGCTGGAGAGTTATTGGAAT+AGG | - | chr3_2:60418903-60418922 | None:intergenic | 45.0% | |
| ! | GTTGTAGCAAGGGCATGTAT+TGG | - | chr3_2:60418957-60418976 | None:intergenic | 45.0% |
| !! | GTTGATGGTACAAAGAGAGG+AGG | - | chr3_2:60419079-60419098 | None:intergenic | 45.0% |
| TCGACACTACATTCCTCTCT+TGG | + | chr3_2:60419123-60419142 | Msa0414730:intron | 45.0% | |
| TTCCTCTCTTGGAACATCAG+AGG | + | chr3_2:60419134-60419153 | Msa0414730:intron | 45.0% | |
| TCCTCTCTTGGAACATCAGA+GGG | + | chr3_2:60419135-60419154 | Msa0414730:intron | 45.0% | |
| ATGAAGGAGCCATATTCCTC+CGG | - | chr3_2:60419324-60419343 | None:intergenic | 45.0% | |
| TGTTGCTAGCGGAATGATGA+AGG | - | chr3_2:60419340-60419359 | None:intergenic | 45.0% | |
| ! | GTTATAGTCAAGGATGGTGG+TGG | - | chr3_2:60419366-60419385 | None:intergenic | 45.0% |
| GTGAGGTAAGACCAAAGGTT+AGG | - | chr3_2:60419476-60419495 | None:intergenic | 45.0% | |
| ! | TGGCTTGGCTAATGTTTGTG+AGG | - | chr3_2:60419493-60419512 | None:intergenic | 45.0% |
| GATGTCCCTTGGATGCTAAT+AGG | + | chr3_2:60419515-60419534 | Msa0414730:intron | 45.0% | |
| AGTCGCCTATTAGCATCCAA+GGG | - | chr3_2:60419523-60419542 | None:intergenic | 45.0% | |
| AAGTCGCCTATTAGCATCCA+AGG | - | chr3_2:60419524-60419543 | None:intergenic | 45.0% | |
| CCTTTGTTCACTAGGGAGAA+GGG | - | chr3_2:60419555-60419574 | None:intergenic | 45.0% | |
| CCTTCTCCCTAGTGAACAAA+GGG | + | chr3_2:60419553-60419572 | Msa0414730:intron | 45.0% | |
| CTTCTCCCTAGTGAACAAAG+GGG | + | chr3_2:60419554-60419573 | Msa0414730:intron | 45.0% | |
| CTTGATCTTACAACCACAGG+TGG | + | chr3_2:60419638-60419657 | Msa0414730:intron | 45.0% | |
| CCAAGTAAAATGACCACCTG+TGG | - | chr3_2:60419654-60419673 | None:intergenic | 45.0% | |
| !! | CCACAGGTGGTCATTTTACT+TGG | + | chr3_2:60419651-60419670 | Msa0414730:intron | 45.0% |
| !! | GTGGTCATTTTACTTGGCAC+CGG | + | chr3_2:60419657-60419676 | Msa0414730:intron | 45.0% |
| ! | ACTTGGCACCGGAACAATAA+TGG | + | chr3_2:60419668-60419687 | Msa0414730:intron | 45.0% |
| !! | GAAGCATCGCTAATGTCGAT+TGG | + | chr3_2:60419720-60419739 | Msa0414730:intron | 45.0% |
| AGGACCTCAACAAAAGCTTC+CGG | - | chr3_2:60419758-60419777 | None:intergenic | 45.0% | |
| GAAGAGGGTTATGATCAGAG+TGG | - | chr3_2:60419790-60419809 | None:intergenic | 45.0% | |
| CAAGCTGCTTCAAAACGGAA+GGG | - | chr3_2:60419854-60419873 | None:intergenic | 45.0% | |
| TTACCACTTCCACATAGTCG+CGG | - | chr3_2:60419886-60419905 | None:intergenic | 45.0% | |
| AGTTTGGGCATGAAAGAAGG+AGG | - | chr3_2:60420197-60420216 | None:intergenic | 45.0% | |
| ! | GTAGGGCTTCATGGTGTTAA+GGG | - | chr3_2:60420449-60420468 | None:intergenic | 45.0% |
| ! | TGTAGGGCTTCATGGTGTTA+AGG | - | chr3_2:60420450-60420469 | None:intergenic | 45.0% |
| CAATGAAAACCATCTGGTCC+AGG | - | chr3_2:60420478-60420497 | None:intergenic | 45.0% | |
| ! | CCAAACAGGTCACTTTGATC+CGG | + | chr3_2:60420564-60420583 | Msa0414730:intron | 45.0% |
| !!! | GGTGATGGGCGAATCTATTT+TGG | - | chr3_2:60420620-60420639 | None:intergenic | 45.0% |
| ! | AGCAGTTTTCTTCCTGGTAG+GGG | + | chr3_2:60420751-60420770 | Msa0414730:intron | 45.0% |
| !! | TTATCAGAAGTACCCCTACC+AGG | - | chr3_2:60420766-60420785 | None:intergenic | 45.0% |
| GACATAGCCCTTCTTCTTCT+TGG | - | chr3_2:60420830-60420849 | None:intergenic | 45.0% | |
| TTTCCTCAAGTCTTGCCTTC+AGG | + | chr3_2:60420897-60420916 | Msa0414730:intron | 45.0% | |
| AAGTCTTGCCTTCAGGAGTT+TGG | + | chr3_2:60420904-60420923 | Msa0414730:intron | 45.0% | |
| CCTTCAGGAGTTTGGATTTC+CGG | + | chr3_2:60420912-60420931 | Msa0414730:intron | 45.0% | |
| ACCATGTGTGGGTTTGAAAG+GGG | - | chr3_2:60421013-60421032 | None:intergenic | 45.0% | |
| GACCATGTGTGGGTTTGAAA+GGG | - | chr3_2:60421014-60421033 | None:intergenic | 45.0% | |
| AGACCATGTGTGGGTTTGAA+AGG | - | chr3_2:60421015-60421034 | None:intergenic | 45.0% | |
| CCGATTCAAATCACTAACGG+AGG | + | chr3_2:60421132-60421151 | Msa0414730:intron | 45.0% | |
| TTCCAAGAGACGTTGTGCTA+CGG | - | chr3_2:60421361-60421380 | None:intergenic | 45.0% | |
| AACCGTCTTCTCAACAGAAC+AGG | + | chr3_2:60421476-60421495 | Msa0414730:intron | 45.0% | |
| ! | TTGGCGGGGTTCTAATAACA+AGG | + | chr3_2:60421613-60421632 | Msa0414730:intron | 45.0% |
| ! | TGGCGGGGTTCTAATAACAA+GGG | + | chr3_2:60421614-60421633 | Msa0414730:intron | 45.0% |
| CAGCAATAACTCACCCTCTT+GGG | + | chr3_2:60421835-60421854 | Msa0414730:intron | 45.0% | |
| CGAATGATAGATGCCCAAGA+GGG | - | chr3_2:60421851-60421870 | None:intergenic | 45.0% | |
| ACGAATGATAGATGCCCAAG+AGG | - | chr3_2:60421852-60421871 | None:intergenic | 45.0% | |
| !! | CCCGCTTTTGAGCATATCTT+TGG | - | chr3_2:60421876-60421895 | None:intergenic | 45.0% |
| ATTGCCGAACCAAAAGGATG+TGG | - | chr3_2:60421924-60421943 | None:intergenic | 45.0% | |
| !!! | CATCCTTTTGGTTCGGCAAT+TGG | + | chr3_2:60421924-60421943 | Msa0414730:intron | 45.0% |
| AACCGGAACCAAAGATCCAA+GGG | - | chr3_2:60421963-60421982 | None:intergenic | 45.0% | |
| TAACCGGAACCAAAGATCCA+AGG | - | chr3_2:60421964-60421983 | None:intergenic | 45.0% | |
| TTGGGACCATAACAAGAACG+GGG | + | chr3_2:60422138-60422157 | Msa0414730:intron | 45.0% | |
| TGTAGACCCCGTTCTTGTTA+TGG | - | chr3_2:60422147-60422166 | None:intergenic | 45.0% | |
| GGGGTCTACACAACTAAAAG+TGG | + | chr3_2:60422157-60422176 | Msa0414730:intron | 45.0% | |
| ACCCAACTCCAAGAATGATG+CGG | - | chr3_2:60422229-60422248 | None:intergenic | 45.0% | |
| GAGTTGGGTTTGGAAATTGC+AGG | + | chr3_2:60422240-60422259 | Msa0414730:intron | 45.0% | |
| TCTTTCTTGCTTGTCTCTGG+TGG | + | chr3_2:60422527-60422546 | Msa0414730:intron | 45.0% | |
| GAGCAGTTTGAAAGGCTTGA+CGG | - | chr3_2:60422645-60422664 | None:intergenic | 45.0% | |
| AGCTGTTGGAGCAGTTTGAA+AGG | - | chr3_2:60422653-60422672 | None:intergenic | 45.0% | |
| TGCTGTTCCAACTAATCCAC+CGG | - | chr3_2:60422684-60422703 | None:intergenic | 45.0% | |
| GAAACAGACCTGCATTGTTG+CGG | - | chr3_2:60422786-60422805 | None:intergenic | 45.0% | |
| !! | AATGCAGGTCTGTTTCTGAC+TGG | + | chr3_2:60422790-60422809 | Msa0414730:intron | 45.0% |
| !! | CTGTTTCTGACTGGTTTCTC+AGG | + | chr3_2:60422799-60422818 | Msa0414730:intron | 45.0% |
| TCTGAGTTTAGCAGCAGACA+TGG | + | chr3_2:60422879-60422898 | Msa0414730:intron | 45.0% | |
| CTGAGTTTAGCAGCAGACAT+GGG | + | chr3_2:60422880-60422899 | Msa0414730:intron | 45.0% | |
| TAGAGAAGGGAATCAATGCG+CGG | + | chr3_2:60423050-60423069 | Msa0414730:intron | 45.0% | |
| !!! | GAATCAATGCGCGGGTTTTT+TGG | + | chr3_2:60423059-60423078 | Msa0414730:intron | 45.0% |
| AAGTGTATGAGATCATGGGG+AGG | - | chr3_2:60423132-60423151 | None:intergenic | 45.0% | |
| GCAGCAAGTGTATGAGATCA+TGG | - | chr3_2:60423137-60423156 | None:intergenic | 45.0% | |
| AGTAAGTGGGACCTAGAACA+TGG | - | chr3_2:60423287-60423306 | None:intergenic | 45.0% | |
| CCTTTCATGTGATAGCCACT+TGG | - | chr3_2:60423586-60423605 | None:intergenic | 45.0% | |
| CCAAGTGGCTATCACATGAA+AGG | + | chr3_2:60423583-60423602 | Msa0414730:intron | 45.0% | |
| ACAGCATTCGAAGGAAGCTA+TGG | + | chr3_2:60423736-60423755 | Msa0414730:CDS | 45.0% | |
| GAAGGCTTGAAGACTCTAGA+AGG | + | chr3_2:60423804-60423823 | Msa0414730:CDS | 45.0% | |
| ! | AAGACTCTAGAAGGTGAGCT+TGG | + | chr3_2:60423813-60423832 | Msa0414730:CDS | 45.0% |
| AGTGTCCTAAGCTTGTAGCT+TGG | + | chr3_2:60423949-60423968 | Msa0414730:CDS | 45.0% | |
| GTGTCCTAAGCTTGTAGCTT+GGG | + | chr3_2:60423950-60423969 | Msa0414730:CDS | 45.0% | |
| ! | CCATAGATTTTGTGTGGGTG+AGG | - | chr3_2:60424017-60424036 | None:intergenic | 45.0% |
| CCTCACCCACACAAAATCTA+TGG | + | chr3_2:60424014-60424033 | Msa0414730:CDS | 45.0% | |
| ! | CTGCACACGAAGTTCTTTTC+AGG | - | chr3_2:60424104-60424123 | None:intergenic | 45.0% |
| !!! | ATATATATTCAATAAAATTT+TGG | - | chr3_2:60417648-60417667 | None:intergenic | 5.0% |
| !! | TTTATTGAATATATATTAAA+TGG | + | chr3_2:60417652-60417671 | Msa0414730:intron | 5.0% |
| GTATCGAACTCGCGACCTAT+AGG | + | chr3_2:60417826-60417845 | Msa0414730:intron | 50.0% | |
| ! | GGATCTCTTTAGGGACTGGT+GGG | - | chr3_2:60417948-60417967 | None:intergenic | 50.0% |
| GAGTGGAGACCCCACAAATA+TGG | - | chr3_2:60418150-60418169 | None:intergenic | 50.0% | |
| ATTGCTGCGCCGAATATACG+TGG | - | chr3_2:60418679-60418698 | None:intergenic | 50.0% | |
| !! | CAAGGATTGGTTTGCGTGTG+GGG | - | chr3_2:60418755-60418774 | None:intergenic | 50.0% |
| !! | CCAAGGATTGGTTTGCGTGT+GGG | - | chr3_2:60418756-60418775 | None:intergenic | 50.0% |
| TCGCATTTGTGGTCATGCCA+AGG | - | chr3_2:60418773-60418792 | None:intergenic | 50.0% | |
| !! | AATTGGTTCGGTCATGGGCA+TGG | - | chr3_2:60418871-60418890 | None:intergenic | 50.0% |
| CCTCTCTTGGAACATCAGAG+GGG | + | chr3_2:60419136-60419155 | Msa0414730:intron | 50.0% | |
| GAAACACCAACCGACCTTCA+TGG | + | chr3_2:60419202-60419221 | Msa0414730:intron | 50.0% | |
| TGATAGCCATGAAGGTCGGT+TGG | - | chr3_2:60419211-60419230 | None:intergenic | 50.0% | |
| AGCATAGATGCAGGTGCAAG+CGG | - | chr3_2:60419432-60419451 | None:intergenic | 50.0% | |
| ! | GTTAGGGCTAGCATAGATGC+AGG | - | chr3_2:60419441-60419460 | None:intergenic | 50.0% |
| !! | AAAGGTTAGGGCGCTGAGAA+GGG | - | chr3_2:60419463-60419482 | None:intergenic | 50.0% |
| TAGCATCCAAGGGACATCGA+TGG | - | chr3_2:60419513-60419532 | None:intergenic | 50.0% | |
| CCCTTCTCCCTAGTGAACAA+AGG | + | chr3_2:60419552-60419571 | Msa0414730:intron | 50.0% | |
| CCCTTTGTTCACTAGGGAGA+AGG | - | chr3_2:60419556-60419575 | None:intergenic | 50.0% | |
| TACCGCCCCTTTGTTCACTA+GGG | - | chr3_2:60419562-60419581 | None:intergenic | 50.0% | |
| ATACCGCCCCTTTGTTCACT+AGG | - | chr3_2:60419563-60419582 | None:intergenic | 50.0% | |
| ! | CGATTGGCGTGTCTCTTTTC+CGG | + | chr3_2:60419736-60419755 | Msa0414730:intron | 50.0% |
| CCAAGCTGCTTCAAAACGGA+AGG | - | chr3_2:60419855-60419874 | None:intergenic | 50.0% | |
| !!! | CCTTCCGTTTTGAAGCAGCT+TGG | + | chr3_2:60419852-60419871 | Msa0414730:intron | 50.0% |
| GATAGATCACCGCGACTATG+TGG | + | chr3_2:60419874-60419893 | Msa0414730:intron | 50.0% | |
| TGGAAGTGGTAAGAAGCTCC+TGG | + | chr3_2:60419894-60419913 | Msa0414730:intron | 50.0% | |
| !!! | TTTTTCGAGAAGGGTGTGGC+GGG | - | chr3_2:60420077-60420096 | None:intergenic | 50.0% |
| !!! | CTTTTTCGAGAAGGGTGTGG+CGG | - | chr3_2:60420078-60420097 | None:intergenic | 50.0% |
| TCGGAGGTCCATATGCCATT+TGG | - | chr3_2:60420262-60420281 | None:intergenic | 50.0% | |
| ! | TAGGAGGTTGTTGCTGGTTG+GGG | - | chr3_2:60420347-60420366 | None:intergenic | 50.0% |
| ! | GTAGGAGGTTGTTGCTGGTT+GGG | - | chr3_2:60420348-60420367 | None:intergenic | 50.0% |
| TGTAGGAGGTTGTTGCTGGT+TGG | - | chr3_2:60420349-60420368 | None:intergenic | 50.0% | |
| ACCAGCAACAACCTCCTACA+TGG | + | chr3_2:60420349-60420368 | Msa0414730:intron | 50.0% | |
| !! | TAGTTCGTCAATGGTGGGTG+GGG | - | chr3_2:60420377-60420396 | None:intergenic | 50.0% |
| !! | CTAGTTCGTCAATGGTGGGT+GGG | - | chr3_2:60420378-60420397 | None:intergenic | 50.0% |
| ! | TCTAGTTCGTCAATGGTGGG+TGG | - | chr3_2:60420379-60420398 | None:intergenic | 50.0% |
| AGGTGCTTTGTAGGGCTTCA+TGG | - | chr3_2:60420458-60420477 | None:intergenic | 50.0% | |
| ! | ATGAAGCCCTACAAAGCACC+TGG | + | chr3_2:60420457-60420476 | Msa0414730:intron | 50.0% |
| TCTGGTCCAGGTGCTTTGTA+GGG | - | chr3_2:60420466-60420485 | None:intergenic | 50.0% | |
| ATCTGGTCCAGGTGCTTTGT+AGG | - | chr3_2:60420467-60420486 | None:intergenic | 50.0% | |
| ! | TACAAAGCACCTGGACCAGA+TGG | + | chr3_2:60420466-60420485 | Msa0414730:intron | 50.0% |
| GTCCAAACAGCCTTCCAAAC+AGG | + | chr3_2:60420550-60420569 | Msa0414730:intron | 50.0% | |
| GACCTGTTTGGAAGGCTGTT+TGG | - | chr3_2:60420555-60420574 | None:intergenic | 50.0% | |
| CCGGATCAAAGTGACCTGTT+TGG | - | chr3_2:60420567-60420586 | None:intergenic | 50.0% | |
| ACTCCTGAAGGCAAGACTTG+AGG | - | chr3_2:60420903-60420922 | None:intergenic | 50.0% | |
| CCGGAAATCCAAACTCCTGA+AGG | - | chr3_2:60420915-60420934 | None:intergenic | 50.0% | |
| CCATGTGTGGGTTTGAAAGG+GGG | - | chr3_2:60421012-60421031 | None:intergenic | 50.0% | |
| ! | CCTTGTCTGAGACCATGTGT+GGG | - | chr3_2:60421024-60421043 | None:intergenic | 50.0% |
| ! | ACCTTGTCTGAGACCATGTG+TGG | - | chr3_2:60421025-60421044 | None:intergenic | 50.0% |
| ATCAATCATGCCGTGCACCA+TGG | + | chr3_2:60421099-60421118 | Msa0414730:intron | 50.0% | |
| TTCCCAACTTCCATGGTGCA+CGG | - | chr3_2:60421112-60421131 | None:intergenic | 50.0% | |
| ! | GAATCGGTTCCCAACTTCCA+TGG | - | chr3_2:60421119-60421138 | None:intergenic | 50.0% |
| ATCCGTAGCACAACGTCTCT+TGG | + | chr3_2:60421356-60421375 | Msa0414730:intron | 50.0% | |
| !! | TGAAGTCGCTTCTTTTCGGG+CGG | - | chr3_2:60421412-60421431 | None:intergenic | 50.0% |
| ! | TGCAAACAAGGTTGGCTGCT+TGG | + | chr3_2:60421450-60421469 | Msa0414730:intron | 50.0% |
| CCAAGAGGGTGAGTTATTGC+TGG | - | chr3_2:60421837-60421856 | None:intergenic | 50.0% | |
| CCAGCAATAACTCACCCTCT+TGG | + | chr3_2:60421834-60421853 | Msa0414730:intron | 50.0% | |
| TGCTCAAAAGCGGGTACTCT+TGG | + | chr3_2:60421882-60421901 | Msa0414730:intron | 50.0% | |
| !! | GGCTCCACATCCTTTTGGTT+CGG | + | chr3_2:60421917-60421936 | Msa0414730:intron | 50.0% |
| GCTCCAATTGCCGAACCAAA+AGG | - | chr3_2:60421930-60421949 | None:intergenic | 50.0% | |
| ! | TCCCCTTGGATCTTTGGTTC+CGG | + | chr3_2:60421958-60421977 | Msa0414730:intron | 50.0% |
| ACCGGAACCAAAGATCCAAG+GGG | - | chr3_2:60421962-60421981 | None:intergenic | 50.0% | |
| TTGAGTGTGAGGGCTATCAG+AGG | - | chr3_2:60422029-60422048 | None:intergenic | 50.0% | |
| !! | GTCAGTTGCTGTTTCAGAGG+AGG | - | chr3_2:60422200-60422219 | None:intergenic | 50.0% |
| !! | GCTGTCAGTTGCTGTTTCAG+AGG | - | chr3_2:60422203-60422222 | None:intergenic | 50.0% |
| CCAACTCCAAGAATGATGCG+GGG | - | chr3_2:60422227-60422246 | None:intergenic | 50.0% | |
| CCCAACTCCAAGAATGATGC+GGG | - | chr3_2:60422228-60422247 | None:intergenic | 50.0% | |
| CCCGCATCATTCTTGGAGTT+GGG | + | chr3_2:60422225-60422244 | Msa0414730:intron | 50.0% | |
| CATGAACAGCCAGCCAAATG+AGG | - | chr3_2:60422285-60422304 | None:intergenic | 50.0% | |
| GGTGCAGCAAGGAGAGATTA+GGG | - | chr3_2:60422315-60422334 | None:intergenic | 50.0% | |
| TGGTGCAGCAAGGAGAGATT+AGG | - | chr3_2:60422316-60422335 | None:intergenic | 50.0% | |
| ATCACCGCATCTGCTAGTTG+TGG | + | chr3_2:60422343-60422362 | Msa0414730:intron | 50.0% | |
| CCTTCCACAACTAGCAGATG+CGG | - | chr3_2:60422350-60422369 | None:intergenic | 50.0% | |
| TCTGCTAGTTGTGGAAGGTG+CGG | + | chr3_2:60422352-60422371 | Msa0414730:intron | 50.0% | |
| GCAAGAAAGATGTGAGCACG+AGG | - | chr3_2:60422517-60422536 | None:intergenic | 50.0% | |
| CATATTATTGCGATGCCGCC+AGG | - | chr3_2:60422554-60422573 | None:intergenic | 50.0% | |
| ! | AACTGCTCCAACAGCTTGCT+CGG | + | chr3_2:60422657-60422676 | Msa0414730:intron | 50.0% |
| TGCCACATTCTCAACGTCGA+TGG | + | chr3_2:60422715-60422734 | Msa0414730:intron | 50.0% | |
| TGCCATCGACGTTGAGAATG+TGG | - | chr3_2:60422720-60422739 | None:intergenic | 50.0% | |
| ACGCCTCTTCAAGCAGGTTA+TGG | + | chr3_2:60422751-60422770 | Msa0414730:intron | 50.0% | |
| CCTCCATAACCTGCTTGAAG+AGG | - | chr3_2:60422757-60422776 | None:intergenic | 50.0% | |
| CCTCTTCAAGCAGGTTATGG+AGG | + | chr3_2:60422754-60422773 | Msa0414730:intron | 50.0% | |
| GGCTTAATCCGCAACAATGC+AGG | + | chr3_2:60422775-60422794 | Msa0414730:intron | 50.0% | |
| !! | TTCTGACTGGTTTCTCAGGC+CGG | + | chr3_2:60422803-60422822 | Msa0414730:intron | 50.0% |
| GCAGCAGACATGGGAATTGA+TGG | + | chr3_2:60422889-60422908 | Msa0414730:intron | 50.0% | |
| GAATTAGCACCGCATAGACG+TGG | - | chr3_2:60422978-60422997 | None:intergenic | 50.0% | |
| AGAGAAGGGAATCAATGCGC+GGG | + | chr3_2:60423051-60423070 | Msa0414730:intron | 50.0% | |
| !!! | GCGGGTTTTTTGGCAAAGCT+CGG | + | chr3_2:60423069-60423088 | Msa0414730:intron | 50.0% |
| TTGCTGCAGACTGATGCCAT+GGG | + | chr3_2:60423150-60423169 | Msa0414730:intron | 50.0% | |
| TCTCAAGAAAGCCGTTCCCA+TGG | - | chr3_2:60423169-60423188 | None:intergenic | 50.0% | |
| ATCCATACTTCACGCCCAAG+TGG | + | chr3_2:60423568-60423587 | Msa0414730:intron | 50.0% | |
| TTGGCCCAAGCTACAAGCTT+AGG | - | chr3_2:60423957-60423976 | None:intergenic | 50.0% | |
| AGCTTGTAGCTTGGGCCAAA+AGG | + | chr3_2:60423958-60423977 | Msa0414730:CDS | 50.0% | |
| ! | AGCTTGGGCCAAAAGGTGTA+TGG | + | chr3_2:60423965-60423984 | Msa0414730:CDS | 50.0% |
| AGAGATCGTTGGGGATTGCA+TGG | + | chr3_2:60424075-60424094 | Msa0414730:exon | 50.0% | |
| GAGATCGTTGGGGATTGCAT+GGG | + | chr3_2:60424076-60424095 | Msa0414730:exon | 50.0% | |
| AGGGTCACAGGGCAAAAGAG+AGG | - | chr3_2:60417495-60417514 | None:intergenic | 55.0% | |
| ! | TAACATTGCGGCTGGCTCAG+TGG | - | chr3_2:60417871-60417890 | None:intergenic | 55.0% |
| ! | CGGATCTCTTTAGGGACTGG+TGG | - | chr3_2:60417949-60417968 | None:intergenic | 55.0% |
| ! | TGGCGGATCTCTTTAGGGAC+TGG | - | chr3_2:60417952-60417971 | None:intergenic | 55.0% |
| CCCACACGCAAACCAATCCT+TGG | + | chr3_2:60418753-60418772 | Msa0414730:intron | 55.0% | |
| !! | GCCAAGGATTGGTTTGCGTG+TGG | - | chr3_2:60418757-60418776 | None:intergenic | 55.0% |
| CCCCTCTGATGTTCCAAGAG+AGG | - | chr3_2:60419139-60419158 | None:intergenic | 55.0% | |
| ! | GAGCTTTGCGAAGGGCACAT+GGG | - | chr3_2:60419240-60419259 | None:intergenic | 55.0% |
| ! | AGAGCTTTGCGAAGGGCACA+TGG | - | chr3_2:60419241-60419260 | None:intergenic | 55.0% |
| ATTGAAGCCAACGGCCACTC+CGG | + | chr3_2:60419302-60419321 | Msa0414730:intron | 55.0% | |
| ! | GGTGGTGGTGATGTTGCTAG+CGG | - | chr3_2:60419351-60419370 | None:intergenic | 55.0% |
| !! | TAGGGCGCTGAGAAGGGTTA+GGG | - | chr3_2:60419457-60419476 | None:intergenic | 55.0% |
| !! | TTAGGGCGCTGAGAAGGGTT+AGG | - | chr3_2:60419458-60419477 | None:intergenic | 55.0% |
| !! | CAAAGGTTAGGGCGCTGAGA+AGG | - | chr3_2:60419464-60419483 | None:intergenic | 55.0% |
| CTTCTCAGCGCCCTAACCTT+TGG | + | chr3_2:60419462-60419481 | Msa0414730:intron | 55.0% | |
| TCCAAGGGACATCGATGGCT+TGG | - | chr3_2:60419508-60419527 | None:intergenic | 55.0% | |
| CTCCCTAGTGAACAAAGGGG+CGG | + | chr3_2:60419557-60419576 | Msa0414730:intron | 55.0% | |
| GATCAGAGTGGTGTCTGCAG+AGG | - | chr3_2:60419778-60419797 | None:intergenic | 55.0% | |
| AACCCTCTTCTCCTCCGCTT+TGG | + | chr3_2:60419800-60419819 | Msa0414730:intron | 55.0% | |
| CACCAAAGCGGAGGAGAAGA+GGG | - | chr3_2:60419805-60419824 | None:intergenic | 55.0% | |
| CTAATGGGAGGCCACCAAAG+CGG | - | chr3_2:60419817-60419836 | None:intergenic | 55.0% | |
| GTGGCCTCCCATTAGCAAGA+GGG | + | chr3_2:60419822-60419841 | Msa0414730:intron | 55.0% | |
| GCTTCAAAACGGAAGGGCCT+GGG | - | chr3_2:60419848-60419867 | None:intergenic | 55.0% | |
| TGCTTCAAAACGGAAGGGCC+TGG | - | chr3_2:60419849-60419868 | None:intergenic | 55.0% | |
| TCACCGCGACTATGTGGAAG+TGG | + | chr3_2:60419880-60419899 | Msa0414730:intron | 55.0% | |
| ! | TGCTGGTTGGGGGATGTTGT+TGG | - | chr3_2:60420336-60420355 | None:intergenic | 55.0% |
| ! | AGGAGGTTGTTGCTGGTTGG+GGG | - | chr3_2:60420346-60420365 | None:intergenic | 55.0% |
| GCCATGTAGGAGGTTGTTGC+TGG | - | chr3_2:60420353-60420372 | None:intergenic | 55.0% | |
| CCCCCTTTCAAACCCACACA+TGG | + | chr3_2:60421009-60421028 | Msa0414730:intron | 55.0% | |
| CCCACACATGGTCTCAGACA+AGG | + | chr3_2:60421021-60421040 | Msa0414730:intron | 55.0% | |
| ATGCCGTGCACCATGGAAGT+TGG | + | chr3_2:60421106-60421125 | Msa0414730:intron | 55.0% | |
| TGCCGTGCACCATGGAAGTT+GGG | + | chr3_2:60421107-60421126 | Msa0414730:intron | 55.0% | |
| AAATCACTAACGGAGGGCCG+AGG | + | chr3_2:60421139-60421158 | Msa0414730:intron | 55.0% | |
| ! | GACAGATTCAGCAGGGCATC+AGG | + | chr3_2:60421245-60421264 | Msa0414730:intron | 55.0% |
| AAGCGGGTACTCTTGGAGAC+CGG | + | chr3_2:60421889-60421908 | Msa0414730:intron | 55.0% | |
| ! | GCTCAGGCTCCACATCCTTT+TGG | + | chr3_2:60421912-60421931 | Msa0414730:intron | 55.0% |
| TTCGGCAATTGGAGCCACCA+TGG | + | chr3_2:60421935-60421954 | Msa0414730:intron | 55.0% | |
| AAGATCCAAGGGGACCATGG+TGG | - | chr3_2:60421952-60421971 | None:intergenic | 55.0% | |
| CCAAAGATCCAAGGGGACCA+TGG | - | chr3_2:60421955-60421974 | None:intergenic | 55.0% | |
| CCATGGTCCCCTTGGATCTT+TGG | + | chr3_2:60421952-60421971 | Msa0414730:intron | 55.0% | |
| ! | ATCAGCTGCTGCTTGGGGAA+GGG | - | chr3_2:60422065-60422084 | None:intergenic | 55.0% |
| ! | TATCAGCTGCTGCTTGGGGA+AGG | - | chr3_2:60422066-60422085 | None:intergenic | 55.0% |
| TCCCCAAGCAGCAGCTGATA+CGG | + | chr3_2:60422066-60422085 | Msa0414730:intron | 55.0% | |
| ! | ACCGTATCAGCTGCTGCTTG+GGG | - | chr3_2:60422070-60422089 | None:intergenic | 55.0% |
| ! | CACCGTATCAGCTGCTGCTT+GGG | - | chr3_2:60422071-60422090 | None:intergenic | 55.0% |
| TCACCGTATCAGCTGCTGCT+TGG | - | chr3_2:60422072-60422091 | None:intergenic | 55.0% | |
| ACAGCACCCCGCATCATTCT+TGG | + | chr3_2:60422218-60422237 | Msa0414730:intron | 55.0% | |
| CCCCGCATCATTCTTGGAGT+TGG | + | chr3_2:60422224-60422243 | Msa0414730:intron | 55.0% | |
| GATGTGTCTGTGGTGCAGCA+AGG | - | chr3_2:60422326-60422345 | None:intergenic | 55.0% | |
| CAGATGCGGTGATGTGTCTG+TGG | - | chr3_2:60422336-60422355 | None:intergenic | 55.0% | |
| CCGCATCTGCTAGTTGTGGA+AGG | + | chr3_2:60422347-60422366 | Msa0414730:intron | 55.0% | |
| GATGTGAGCACGAGGTCCTT+TGG | - | chr3_2:60422509-60422528 | None:intergenic | 55.0% | |
| TTGCTTGTCTCTGGTGGTCC+TGG | + | chr3_2:60422533-60422552 | Msa0414730:intron | 55.0% | |
| ! | CTGCTTGAAGAGGCGTACCA+AGG | - | chr3_2:60422747-60422766 | None:intergenic | 55.0% |
| CTTGGTACGCCTCTTCAAGC+AGG | + | chr3_2:60422745-60422764 | Msa0414730:intron | 55.0% | |
| CTTGCTGCAGACTGATGCCA+TGG | + | chr3_2:60423149-60423168 | Msa0414730:intron | 55.0% | |
| GCAGACTGATGCCATGGGAA+CGG | + | chr3_2:60423155-60423174 | Msa0414730:intron | 55.0% | |
| AGCCACTTGGGCGTGAAGTA+TGG | - | chr3_2:60423573-60423592 | None:intergenic | 55.0% | |
| ! | TGCGGCTGGCTCAGTGGAAA+GGG | - | chr3_2:60417865-60417884 | None:intergenic | 60.0% |
| ! | TTGCGGCTGGCTCAGTGGAA+AGG | - | chr3_2:60417866-60417885 | None:intergenic | 60.0% |
| ! | TTAGGGACTGGTGGGTGCCA+TGG | - | chr3_2:60417940-60417959 | None:intergenic | 60.0% |
| TAGTTTGACCCGTCCCCCTC+TGG | + | chr3_2:60418729-60418748 | Msa0414730:intron | 60.0% | |
| TATTCCTCCGGAGTGGCCGT+TGG | - | chr3_2:60419312-60419331 | None:intergenic | 60.0% | |
| ACGGCCACTCCGGAGGAATA+TGG | + | chr3_2:60419312-60419331 | Msa0414730:intron | 60.0% | |
| GGAGCCATATTCCTCCGGAG+TGG | - | chr3_2:60419319-60419338 | None:intergenic | 60.0% | |
| AAGCGGAGTTGGCGTTGCCA+CGG | - | chr3_2:60419415-60419434 | None:intergenic | 60.0% | |
| GATGCAGGTGCAAGCGGAGT+TGG | - | chr3_2:60419426-60419445 | None:intergenic | 60.0% | |
| GCCAAGCCATCGATGTCCCT+TGG | + | chr3_2:60419504-60419523 | Msa0414730:intron | 60.0% | |
| CCACCAAAGCGGAGGAGAAG+AGG | - | chr3_2:60419806-60419825 | None:intergenic | 60.0% | |
| CCTCTTCTCCTCCGCTTTGG+TGG | + | chr3_2:60419803-60419822 | Msa0414730:intron | 60.0% | |
| GGTGGCCTCCCATTAGCAAG+AGG | + | chr3_2:60419821-60419840 | Msa0414730:intron | 60.0% | |
| TGGGCCCTCTTGCTAATGGG+AGG | - | chr3_2:60419829-60419848 | None:intergenic | 60.0% | |
| TCCCATTAGCAAGAGGGCCC+AGG | + | chr3_2:60419828-60419847 | Msa0414730:intron | 60.0% | |
| GCCTGGGCCCTCTTGCTAAT+GGG | - | chr3_2:60419832-60419851 | None:intergenic | 60.0% | |
| CATGGAGCATGGGGAAACCG+AGG | - | chr3_2:60421388-60421407 | None:intergenic | 60.0% | |
| CTCGGTTTCCCCATGCTCCA+TGG | + | chr3_2:60421386-60421405 | Msa0414730:intron | 60.0% | |
| AGCGGGTACTCTTGGAGACC+GGG | + | chr3_2:60421890-60421909 | Msa0414730:intron | 60.0% | |
| TACTCTTGGAGACCGGGCTC+AGG | + | chr3_2:60421896-60421915 | Msa0414730:intron | 60.0% | |
| AAGGATGTGGAGCCTGAGCC+CGG | - | chr3_2:60421911-60421930 | None:intergenic | 60.0% | |
| CTTGTCTCTGGTGGTCCTGG+CGG | + | chr3_2:60422536-60422555 | Msa0414730:intron | 60.0% | |
| ! | CTCCAACAGCTTGCTCGGAC+CGG | + | chr3_2:60422662-60422681 | Msa0414730:intron | 60.0% |
| !! | GCTCGGACCGGTGGATTAGT+TGG | + | chr3_2:60422674-60422693 | Msa0414730:intron | 60.0% |
| AACGTCGATGGCAGCTGCCT+TGG | + | chr3_2:60422727-60422746 | Msa0414730:intron | 60.0% | |
| ! | CGGCTGGCTCAGTGGAAAGG+GGG | - | chr3_2:60417863-60417882 | None:intergenic | 65.0% |
| ! | GCGGCTGGCTCAGTGGAAAG+GGG | - | chr3_2:60417864-60417883 | None:intergenic | 65.0% |
| GGGAAACCTGGGGGATGCCA+TGG | + | chr3_2:60417920-60417939 | Msa0414730:intron | 65.0% | |
| TTTGCGTGTGGGGCCAGAGG+GGG | - | chr3_2:60418745-60418764 | None:intergenic | 65.0% | |
| GTTTGCGTGTGGGGCCAGAG+GGG | - | chr3_2:60418746-60418765 | None:intergenic | 65.0% | |
| GGTTTGCGTGTGGGGCCAGA+GGG | - | chr3_2:60418747-60418766 | None:intergenic | 65.0% | |
| ! | TGGTTTGCGTGTGGGGCCAG+AGG | - | chr3_2:60418748-60418767 | None:intergenic | 65.0% |
| ATGGGAGGCCACCAAAGCGG+AGG | - | chr3_2:60419814-60419833 | None:intergenic | 65.0% | |
| GGCCTGGGCCCTCTTGCTAA+TGG | - | chr3_2:60419833-60419852 | None:intergenic | 65.0% | |
| TGTCACGGCGGCCCTTTCAG+AGG | + | chr3_2:60419934-60419953 | Msa0414730:intron | 65.0% | |
| TTCGGGCGGCCATGGAGCAT+GGG | - | chr3_2:60421398-60421417 | None:intergenic | 65.0% | |
| TTTCGGGCGGCCATGGAGCA+TGG | - | chr3_2:60421399-60421418 | None:intergenic | 65.0% | |
| !! | CGCTTCTTTTCGGGCGGCCA+TGG | - | chr3_2:60421406-60421425 | None:intergenic | 65.0% |
| TGGAGCCACCATGGTCCCCT+TGG | + | chr3_2:60421944-60421963 | Msa0414730:intron | 65.0% | |
| CACCGGTCCGAGCAAGCTGT+TGG | - | chr3_2:60422667-60422686 | None:intergenic | 65.0% | |
| ! | CAACAGCTTGCTCGGACCGG+TGG | + | chr3_2:60422665-60422684 | Msa0414730:intron | 65.0% |
| ! | TGGGTGCCATGGCATCCCCC+AGG | - | chr3_2:60417929-60417948 | None:intergenic | 70.0% |
| GAAGCCAACGGCCACTCCGG+AGG | + | chr3_2:60419305-60419324 | Msa0414730:intron | 70.0% | |
| ! | TGGGTGGGGCGCCATGTAGG+AGG | - | chr3_2:60420363-60420382 | None:intergenic | 70.0% |
| ! | TGGTGGGTGGGGCGCCATGT+AGG | - | chr3_2:60420366-60420385 | None:intergenic | 70.0% |
| TCGGGCGGCCATGGAGCATG+GGG | - | chr3_2:60421397-60421416 | None:intergenic | 70.0% | |
| GTGTGGGGCCAGAGGGGGAC+GGG | - | chr3_2:60418740-60418759 | None:intergenic | 75.0% | |
| CGTGTGGGGCCAGAGGGGGA+CGG | - | chr3_2:60418741-60418760 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 60417300 | 60424314 | 60417300 | ID=Msa0414730;Name=Msa0414730 |
| chr3_2 | mRNA | 60417300 | 60424314 | 60417300 | ID=Msa0414730-mRNA-1;Parent=Msa0414730;Name=Msa0414730-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0|0.5|1|0|0.5|2|238|183 |
| chr3_2 | exon | 60417300 | 60417506 | 60417300 | ID=Msa0414730-mRNA-1:exon:12614;Parent=Msa0414730-mRNA-1 |
| chr3_2 | exon | 60423732 | 60424314 | 60423732 | ID=Msa0414730-mRNA-1:exon:12615;Parent=Msa0414730-mRNA-1 |
| chr3_2 | CDS | 60417300 | 60417506 | 60417300 | ID=Msa0414730-mRNA-1:cds;Parent=Msa0414730-mRNA-1 |
| chr3_2 | CDS | 60423732 | 60424076 | 60423732 | ID=Msa0414730-mRNA-1:cds;Parent=Msa0414730-mRNA-1 |
| chr3_2 | three_prime_UTR | 60424077 | 60424314 | 60424077 | ID=Msa0414730-mRNA-1:three_prime_utr;Parent=Msa0414730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
