Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0366780 | XP_013460469.1 | 82.143 | 224 | 36 | 3 | 1 | 220 | 1 | 224 | 1.07e-125 | 364 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0366780 | sp|P25317|GSTXA_TOBAC | 57.658 | 222 | 84 | 3 | 5 | 219 | 1 | 219 | 9.66e-86 | 256 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0366780 | I3SI44 | 82.143 | 224 | 36 | 3 | 1 | 220 | 1 | 224 | 5.13e-126 | 364 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043850 | Msa0366780 | 0.806437 | 8.230519e-50 | -8.615850e-47 |
| Msa0052780 | Msa0366780 | 0.822331 | 2.508520e-53 | -8.615850e-47 |
| Msa0077370 | Msa0366780 | 0.808383 | 3.182396e-50 | -8.615850e-47 |
| Msa0090380 | Msa0366780 | 0.808429 | 3.110973e-50 | -8.615850e-47 |
| Msa0094710 | Msa0366780 | 0.803583 | 3.252765e-49 | -8.615850e-47 |
| Msa0097570 | Msa0366780 | 0.828301 | 9.702970e-55 | -8.615850e-47 |
| Msa0129640 | Msa0366780 | 0.828505 | 8.663024e-55 | -8.615850e-47 |
| Msa0137860 | Msa0366780 | 0.800697 | 1.276400e-48 | -8.615850e-47 |
| Msa0137980 | Msa0366780 | 0.808629 | 2.819464e-50 | -8.615850e-47 |
| Msa0145430 | Msa0366780 | 0.821238 | 4.490774e-53 | -8.615850e-47 |
| Msa0366770 | Msa0366780 | 0.802786 | 4.755458e-49 | -8.615850e-47 |
| Msa0366780 | Msa0366810 | 0.854624 | 1.087475e-61 | -8.615850e-47 |
| Msa0366780 | Msa0414730 | 0.986923 | 1.948529e-168 | -8.615850e-47 |
| Msa0366780 | Msa0414740 | 0.844731 | 6.303577e-59 | -8.615850e-47 |
| Msa0366780 | Msa0443450 | 0.813781 | 2.151027e-51 | -8.615850e-47 |
| Msa0366780 | Msa0488580 | 0.806532 | 7.857209e-50 | -8.615850e-47 |
| Msa0366780 | Msa0506370 | 0.820082 | 8.275252e-53 | -8.615850e-47 |
| Msa0366780 | Msa0529000 | 0.801072 | 1.069659e-48 | -8.615850e-47 |
| Msa0366780 | Msa0600590 | 0.801522 | 8.654850e-49 | -8.615850e-47 |
| Msa0366780 | Msa0611060 | 0.837712 | 4.420121e-57 | -8.615850e-47 |
| Msa0366780 | Msa0618550 | 0.811254 | 7.673867e-51 | -8.615850e-47 |
| Msa0366780 | Msa0679670 | 0.800259 | 1.567247e-48 | -8.615850e-47 |
| Msa0366780 | Msa0713060 | 0.847748 | 9.501342e-60 | -8.615850e-47 |
| Msa0366780 | Msa0744640 | 0.833233 | 5.998453e-56 | -8.615850e-47 |
| Msa0366780 | Msa0816630 | 0.804046 | 2.607081e-49 | -8.615850e-47 |
| Msa0366780 | Msa0841730 | 0.832291 | 1.028170e-55 | -8.615850e-47 |
| Msa0366780 | Msa1000800 | 0.813074 | 3.076142e-51 | -8.615850e-47 |
| Msa0366780 | Msa1011250 | 0.806320 | 8.710865e-50 | -8.615850e-47 |
| Msa0366780 | Msa1016960 | 0.830820 | 2.368278e-55 | -8.615850e-47 |
| Msa0366780 | Msa1058200 | 0.845096 | 5.026554e-59 | -8.615850e-47 |
| Msa0366780 | Msa1070540 | 0.801042 | 1.084906e-48 | -8.615850e-47 |
| Msa0366780 | Msa1101240 | 0.801171 | 1.020925e-48 | -8.615850e-47 |
| Msa0366780 | Msa1113100 | 0.818026 | 2.429460e-52 | -8.615850e-47 |
| Msa0366780 | Msa1173150 | 0.825300 | 5.053437e-54 | -8.615850e-47 |
| Msa0366780 | Msa1188350 | 0.804649 | 1.951561e-49 | -8.615850e-47 |
| Msa0366780 | Msa1199870 | 0.820611 | 6.260864e-53 | -8.615850e-47 |
| Msa0366780 | Msa1208990 | 0.806872 | 6.662058e-50 | -8.615850e-47 |
| Msa0366780 | Msa1221220 | 0.817076 | 3.977451e-52 | -8.615850e-47 |
| Msa0366780 | Msa1225580 | 0.806400 | 8.377866e-50 | -8.615850e-47 |
| Msa0366780 | Msa1252810 | 0.848686 | 5.233647e-60 | -8.615850e-47 |
| Msa0366780 | Msa1350700 | 0.801024 | 1.094281e-48 | -8.615850e-47 |
| Msa0366780 | Msa1355510 | 0.816287 | 5.976117e-52 | -8.615850e-47 |
| Msa0366780 | Msa1360260 | 0.809094 | 2.242043e-50 | -8.615850e-47 |
| Msa0366780 | Msa1370810 | 0.817974 | 2.495994e-52 | -8.615850e-47 |
| Msa0366780 | Msa1404050 | 0.801187 | 1.013451e-48 | -8.615850e-47 |
| Msa0366780 | Msa1412410 | 0.835810 | 1.351238e-56 | -8.615850e-47 |
| Msa0366780 | Msa1427860 | 0.834212 | 3.414882e-56 | -8.615850e-47 |
| Msa0366780 | Msa1433410 | 0.809562 | 1.779699e-50 | -8.615850e-47 |
| Msa0366780 | Msa1435320 | 0.822376 | 2.449109e-53 | -8.615850e-47 |
| Msa0366780 | Msa1443400 | 0.823932 | 1.061441e-53 | -8.615850e-47 |
| Msa0366780 | Msa1443620 | 0.803210 | 3.886028e-49 | -8.615850e-47 |
| Msa0366780 | Msa1448040 | 0.825016 | 5.898118e-54 | -8.615850e-47 |
| Msa0264680 | Msa0366780 | 0.814703 | 1.346076e-51 | -8.615850e-47 |
| Msa0265480 | Msa0366780 | 0.821921 | 3.121413e-53 | -8.615850e-47 |
| Msa0276430 | Msa0366780 | 0.802377 | 5.773639e-49 | -8.615850e-47 |
| Msa0302730 | Msa0366780 | 0.803168 | 3.965622e-49 | -8.615850e-47 |
| Msa0306310 | Msa0366780 | 0.811064 | 8.439269e-51 | -8.615850e-47 |
| Msa0340370 | Msa0366780 | 0.810766 | 9.789446e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0366780 | MtrunA17_Chr3g0107741 | 82.143 | 224 | 36 | 3 | 1 | 220 | 1 | 224 | 9.88e-130 | 364 |
| Msa0366780 | MtrunA17_Chr3g0107731 | 75.893 | 224 | 50 | 3 | 1 | 220 | 1 | 224 | 5.88e-117 | 332 |
| Msa0366780 | MtrunA17_Chr2g0312771 | 55.300 | 217 | 93 | 2 | 8 | 220 | 3 | 219 | 1.63e-79 | 237 |
| Msa0366780 | MtrunA17_Chr2g0312751 | 52.995 | 217 | 98 | 2 | 8 | 220 | 3 | 219 | 7.46e-77 | 230 |
| Msa0366780 | MtrunA17_Chr2g0312781 | 53.302 | 212 | 95 | 2 | 8 | 215 | 20 | 231 | 2.21e-73 | 222 |
| Msa0366780 | MtrunA17_Chr2g0312681 | 51.613 | 217 | 101 | 2 | 8 | 220 | 3 | 219 | 4.62e-73 | 221 |
| Msa0366780 | MtrunA17_Chr2g0312731 | 52.535 | 217 | 99 | 2 | 8 | 220 | 3 | 219 | 8.33e-73 | 220 |
| Msa0366780 | MtrunA17_Chr2g0312691 | 52.995 | 217 | 98 | 2 | 8 | 220 | 3 | 219 | 7.12e-69 | 210 |
| Msa0366780 | MtrunA17_Chr2g0312811 | 51.142 | 219 | 101 | 3 | 8 | 220 | 3 | 221 | 1.62e-67 | 207 |
| Msa0366780 | MtrunA17_Chr2g0312721 | 49.083 | 218 | 99 | 3 | 8 | 217 | 3 | 216 | 2.74e-67 | 206 |
| Msa0366780 | MtrunA17_Chr2g0312711 | 51.613 | 217 | 100 | 3 | 8 | 220 | 3 | 218 | 1.05e-66 | 204 |
| Msa0366780 | MtrunA17_Chr8g0357211 | 47.926 | 217 | 109 | 2 | 8 | 220 | 3 | 219 | 1.93e-66 | 204 |
| Msa0366780 | MtrunA17_Chr8g0357241 | 47.926 | 217 | 109 | 2 | 8 | 220 | 3 | 219 | 3.71e-66 | 203 |
| Msa0366780 | MtrunA17_Chr2g0312791 | 50.673 | 223 | 96 | 4 | 8 | 220 | 3 | 221 | 6.57e-65 | 200 |
| Msa0366780 | MtrunA17_Chr5g0433801 | 44.144 | 222 | 110 | 4 | 8 | 220 | 5 | 221 | 6.14e-58 | 182 |
| Msa0366780 | MtrunA17_Chr4g0069471 | 52.747 | 182 | 79 | 4 | 7 | 183 | 23 | 202 | 7.89e-54 | 171 |
| Msa0366780 | MtrunA17_Chr5g0415411 | 35.455 | 220 | 129 | 4 | 5 | 211 | 1 | 220 | 1.56e-31 | 115 |
| Msa0366780 | MtrunA17_Chr3g0132581 | 42.105 | 171 | 90 | 4 | 5 | 169 | 1 | 168 | 4.09e-31 | 114 |
| Msa0366780 | MtrunA17_Chr8g0379581 | 36.486 | 222 | 133 | 5 | 5 | 219 | 1 | 221 | 1.40e-30 | 112 |
| Msa0366780 | MtrunA17_Chr4g0008781 | 36.150 | 213 | 123 | 8 | 6 | 209 | 5 | 213 | 1.60e-30 | 112 |
| Msa0366780 | MtrunA17_Chr8g0363751 | 33.778 | 225 | 134 | 4 | 5 | 214 | 1 | 225 | 8.91e-30 | 110 |
| Msa0366780 | MtrunA17_Chr8g0379561 | 37.143 | 210 | 111 | 5 | 5 | 201 | 2 | 203 | 2.26e-29 | 109 |
| Msa0366780 | MtrunA17_Chr7g0240681 | 33.184 | 223 | 131 | 7 | 6 | 216 | 4 | 220 | 5.17e-29 | 108 |
| Msa0366780 | MtrunA17_Chr1g0196771 | 37.089 | 213 | 111 | 9 | 8 | 206 | 2 | 205 | 7.21e-28 | 105 |
| Msa0366780 | MtrunA17_Chr7g0240541 | 36.923 | 195 | 115 | 6 | 18 | 206 | 16 | 208 | 1.66e-27 | 104 |
| Msa0366780 | MtrunA17_Chr6g0483141 | 34.389 | 221 | 133 | 6 | 5 | 216 | 1 | 218 | 2.40e-27 | 103 |
| Msa0366780 | MtrunA17_Chr4g0008791 | 33.488 | 215 | 134 | 5 | 1 | 209 | 1 | 212 | 2.46e-27 | 103 |
| Msa0366780 | MtrunA17_Chr5g0417011 | 34.259 | 216 | 124 | 6 | 5 | 205 | 1 | 213 | 3.28e-27 | 103 |
| Msa0366780 | MtrunA17_Chr1g0212301 | 37.000 | 200 | 118 | 6 | 10 | 201 | 4 | 203 | 5.84e-27 | 102 |
| Msa0366780 | MtrunA17_Chr7g0240691 | 33.178 | 214 | 134 | 5 | 3 | 209 | 32 | 243 | 9.68e-27 | 103 |
| Msa0366780 | MtrunA17_Chr7g0240631 | 30.841 | 214 | 133 | 6 | 6 | 209 | 4 | 212 | 2.16e-26 | 101 |
| Msa0366780 | MtrunA17_Chr7g0240551 | 35.047 | 214 | 116 | 6 | 18 | 217 | 16 | 220 | 3.86e-26 | 100 |
| Msa0366780 | MtrunA17_Chr7g0240641 | 30.841 | 214 | 133 | 5 | 6 | 209 | 4 | 212 | 5.09e-26 | 100 |
| Msa0366780 | MtrunA17_Chr7g0240531 | 35.437 | 206 | 126 | 5 | 18 | 217 | 16 | 220 | 9.28e-26 | 99.8 |
| Msa0366780 | MtrunA17_Chr7g0240561 | 33.491 | 212 | 132 | 6 | 5 | 209 | 3 | 212 | 1.59e-25 | 99.4 |
| Msa0366780 | MtrunA17_Chr1g0196661 | 34.135 | 208 | 128 | 5 | 10 | 209 | 4 | 210 | 6.76e-25 | 97.8 |
| Msa0366780 | MtrunA17_Chr4g0029341 | 35.238 | 210 | 127 | 5 | 8 | 209 | 3 | 211 | 5.14e-24 | 95.1 |
| Msa0366780 | MtrunA17_Chr1g0196721 | 33.810 | 210 | 130 | 5 | 9 | 210 | 2 | 210 | 1.82e-23 | 94.0 |
| Msa0366780 | MtrunA17_Chr7g0240511 | 33.333 | 207 | 127 | 6 | 6 | 207 | 4 | 204 | 1.11e-22 | 91.7 |
| Msa0366780 | MtrunA17_Chr7g0240611 | 30.332 | 211 | 134 | 6 | 6 | 209 | 4 | 208 | 2.60e-22 | 90.9 |
| Msa0366780 | MtrunA17_Chr1g0196711 | 33.649 | 211 | 125 | 7 | 10 | 209 | 4 | 210 | 2.65e-22 | 90.9 |
| Msa0366780 | MtrunA17_Chr8g0391631 | 38.514 | 148 | 68 | 5 | 5 | 147 | 17 | 146 | 7.46e-22 | 88.6 |
| Msa0366780 | MtrunA17_Chr7g0240521 | 34.722 | 216 | 117 | 8 | 18 | 219 | 23 | 228 | 4.84e-21 | 87.8 |
| Msa0366780 | MtrunA17_Chr7g0240581 | 30.476 | 210 | 123 | 5 | 6 | 201 | 4 | 204 | 6.70e-21 | 87.0 |
| Msa0366780 | MtrunA17_Chr7g0240671 | 30.882 | 204 | 134 | 5 | 10 | 209 | 5 | 205 | 8.18e-21 | 86.7 |
| Msa0366780 | MtrunA17_Chr7g0240651 | 31.579 | 209 | 132 | 6 | 7 | 209 | 5 | 208 | 1.51e-19 | 83.6 |
| Msa0366780 | MtrunA17_Chr7g0240661 | 33.962 | 212 | 123 | 7 | 7 | 209 | 5 | 208 | 2.07e-19 | 83.2 |
| Msa0366780 | MtrunA17_Chr1g0196691 | 29.612 | 206 | 131 | 6 | 16 | 210 | 35 | 237 | 4.26e-19 | 82.8 |
| Msa0366780 | MtrunA17_Chr2g0313561 | 75.676 | 37 | 9 | 0 | 52 | 88 | 2 | 38 | 4.07e-13 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0366780 | AT1G78370.1 | 55.450 | 211 | 90 | 2 | 11 | 217 | 6 | 216 | 3.66e-81 | 241 |
| Msa0366780 | AT1G78380.1 | 54.245 | 212 | 93 | 2 | 8 | 215 | 3 | 214 | 3.07e-76 | 229 |
| Msa0366780 | AT1G17180.1 | 55.300 | 217 | 93 | 3 | 8 | 220 | 3 | 219 | 1.38e-75 | 228 |
| Msa0366780 | AT1G17170.1 | 54.378 | 217 | 94 | 4 | 8 | 220 | 3 | 218 | 8.48e-73 | 220 |
| Msa0366780 | AT1G53680.1 | 50.893 | 224 | 102 | 4 | 5 | 220 | 1 | 224 | 4.78e-71 | 216 |
| Msa0366780 | AT1G78360.1 | 51.389 | 216 | 100 | 2 | 10 | 220 | 5 | 220 | 1.48e-70 | 215 |
| Msa0366780 | AT1G78340.1 | 50.000 | 212 | 102 | 3 | 8 | 215 | 3 | 214 | 3.12e-67 | 206 |
| Msa0366780 | AT1G78320.1 | 50.980 | 204 | 96 | 2 | 7 | 206 | 2 | 205 | 1.03e-61 | 192 |
| Msa0366780 | AT1G17190.1 | 45.413 | 218 | 115 | 2 | 5 | 218 | 1 | 218 | 5.85e-59 | 185 |
| Msa0366780 | AT3G43800.1 | 44.796 | 221 | 114 | 5 | 5 | 217 | 1 | 221 | 6.67e-56 | 177 |
| Msa0366780 | AT1G78320.2 | 46.535 | 202 | 81 | 4 | 7 | 206 | 2 | 178 | 6.99e-51 | 164 |
| Msa0366780 | AT1G10360.1 | 37.727 | 220 | 125 | 5 | 5 | 212 | 1 | 220 | 1.44e-34 | 123 |
| Msa0366780 | AT1G59700.1 | 37.900 | 219 | 122 | 6 | 5 | 209 | 1 | 219 | 1.50e-30 | 113 |
| Msa0366780 | AT3G09270.1 | 34.135 | 208 | 128 | 4 | 7 | 206 | 4 | 210 | 1.63e-30 | 112 |
| Msa0366780 | AT2G29440.1 | 35.437 | 206 | 122 | 5 | 5 | 201 | 1 | 204 | 1.18e-29 | 110 |
| Msa0366780 | AT1G10370.1 | 35.780 | 218 | 128 | 5 | 5 | 210 | 1 | 218 | 8.87e-29 | 108 |
| Msa0366780 | AT2G29420.1 | 34.545 | 220 | 111 | 8 | 1 | 201 | 1 | 206 | 4.18e-28 | 106 |
| Msa0366780 | AT2G29490.1 | 35.981 | 214 | 113 | 5 | 7 | 205 | 5 | 209 | 1.84e-27 | 104 |
| Msa0366780 | AT1G59670.1 | 35.268 | 224 | 131 | 6 | 5 | 214 | 1 | 224 | 8.91e-27 | 103 |
| Msa0366780 | AT2G29480.1 | 36.279 | 215 | 111 | 7 | 7 | 205 | 5 | 209 | 5.68e-26 | 100 |
| Msa0366780 | AT1G74590.1 | 33.333 | 225 | 122 | 8 | 10 | 215 | 8 | 223 | 5.78e-26 | 100 |
| Msa0366780 | AT1G27130.1 | 31.193 | 218 | 137 | 4 | 8 | 212 | 5 | 222 | 2.09e-25 | 99.4 |
| Msa0366780 | AT2G29450.1 | 34.112 | 214 | 131 | 5 | 8 | 213 | 5 | 216 | 7.39e-25 | 97.8 |
| Msa0366780 | AT5G62480.1 | 33.645 | 214 | 125 | 8 | 7 | 205 | 6 | 217 | 1.33e-23 | 95.1 |
| Msa0366780 | AT2G29460.1 | 35.096 | 208 | 115 | 7 | 7 | 201 | 5 | 205 | 3.60e-23 | 93.6 |
| Msa0366780 | AT1G27140.1 | 29.680 | 219 | 140 | 4 | 8 | 212 | 5 | 223 | 1.47e-21 | 89.7 |
| Msa0366780 | AT2G29470.1 | 33.810 | 210 | 124 | 7 | 7 | 205 | 5 | 210 | 2.84e-21 | 88.6 |
| Msa0366780 | AT1G69930.1 | 29.730 | 222 | 143 | 5 | 1 | 210 | 4 | 224 | 5.69e-21 | 87.8 |
| Msa0366780 | AT1G69920.1 | 28.761 | 226 | 142 | 6 | 1 | 210 | 26 | 248 | 9.74e-21 | 87.8 |
Find 43 sgRNAs with CRISPR-Local
Find 599 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGCTTGTGATCGTTTATA+AGG | 0.194284 | 3_1:-61711299 | None:intergenic |
| AACGATCACAAGCTAAGTTT+TGG | 0.272037 | 3_1:+61711306 | Msa0366780:CDS |
| ATTTAGATCTTTGTGATGTT+TGG | 0.305922 | 3_1:-61710992 | None:intergenic |
| CTCTTATACCCTTCACTAGT+TGG | 0.309754 | 3_1:+61717313 | Msa0366780:CDS |
| CCTCACCCACACAAAATCTA+TGG | 0.317024 | 3_1:+61717444 | Msa0366780:CDS |
| TGACTTTGGGTATGATGATT+TGG | 0.319984 | 3_1:+61717290 | Msa0366780:CDS |
| AAGTCATCTCCATCAAAATA+TGG | 0.330764 | 3_1:-61717273 | None:intergenic |
| TTTCCATTATGAATCAAAAC+CGG | 0.387545 | 3_1:-61711198 | None:intergenic |
| TTTACACTTACGAGATATAT+GGG | 0.406047 | 3_1:+61717337 | Msa0366780:CDS |
| TATATTAAGTGATTCACATA+TGG | 0.416576 | 3_1:-61711223 | None:intergenic |
| GTGTCCTAAGCTTGTAGCTT+GGG | 0.417667 | 3_1:+61717380 | Msa0366780:CDS |
| TAGCTTGTGATCGTTTATAA+GGG | 0.421473 | 3_1:-61711298 | None:intergenic |
| TTGGCCCAAGCTACAAGCTT+AGG | 0.422848 | 3_1:-61717384 | None:intergenic |
| AGCTTGTAGCTTGGGCCAAA+AGG | 0.454879 | 3_1:+61717388 | Msa0366780:CDS |
| GAAGGCTTGAAGACTCTAGA+AGG | 0.460833 | 3_1:+61717234 | Msa0366780:CDS |
| TCGAGTACATTGATGAAGCT+TGG | 0.489872 | 3_1:+61711247 | Msa0366780:CDS |
| TGATCGTTTATAAGGGTCAC+AGG | 0.494428 | 3_1:-61711291 | None:intergenic |
| TTCCATTATGAATCAAAACC+GGG | 0.499276 | 3_1:-61711197 | None:intergenic |
| AGCTTGGGCCAAAAGGTGTA+TGG | 0.501382 | 3_1:+61717395 | Msa0366780:CDS |
| AAGACTCTAGAAGGTGAGCT+TGG | 0.503893 | 3_1:+61717243 | Msa0366780:CDS |
| AGGAAAGGTTGAAGAACAAG+AGG | 0.520776 | 3_1:+61717191 | Msa0366780:CDS |
| ACTCTCATTGCATACACGCT+TGG | 0.524529 | 3_1:-61711072 | None:intergenic |
| AATGAGAGTGAAAATCGCTT+TGG | 0.526915 | 3_1:+61711086 | Msa0366780:CDS |
| ACAGCATTCGAAGGAAGCTA+TGG | 0.529203 | 3_1:+61717166 | Msa0366780:intron |
| AGTGTCCTAAGCTTGTAGCT+TGG | 0.541196 | 3_1:+61717379 | Msa0366780:CDS |
| TCTAACAATGAGTCAATACA+TGG | 0.549027 | 3_1:+61711017 | Msa0366780:exon |
| AGTGTAAAACCAACTAGTGA+AGG | 0.558553 | 3_1:-61717322 | None:intergenic |
| AAGGTTGAAGAACAAGAGGA+AGG | 0.559445 | 3_1:+61717195 | Msa0366780:CDS |
| GAAAATCGCTTTGGAAGAGA+AGG | 0.565948 | 3_1:+61711095 | Msa0366780:CDS |
| ATGCAATATAAACAAAGCCA+TGG | 0.568014 | 3_1:+61717474 | Msa0366780:CDS |
| ACGATCTCTATTCAAGTCCA+TGG | 0.582640 | 3_1:-61717491 | None:intergenic |
| TTGTGCATTCTTGTTTGACA+CGG | 0.607905 | 3_1:-61710952 | None:intergenic |
| GTGTAAAACCAACTAGTGAA+GGG | 0.625155 | 3_1:-61717321 | None:intergenic |
| AATGAGTCAATACATGGGTG+AGG | 0.627629 | 3_1:+61711023 | Msa0366780:exon |
| TGTAGGTATACAGCATTCGA+AGG | 0.630244 | 3_1:+61717157 | Msa0366780:intron |
| ATTCGAAGGAAGCTATGGAA+AGG | 0.640495 | 3_1:+61717171 | Msa0366780:CDS |
| AGGGTCACAGGGCAAAAGAG+AGG | 0.649220 | 3_1:-61711279 | None:intergenic |
| AAGGAAGCTATGGAAAGGAA+AGG | 0.650275 | 3_1:+61717176 | Msa0366780:CDS |
| AAAATCGCTTTGGAAGAGAA+GGG | 0.661881 | 3_1:+61711096 | Msa0366780:CDS |
| GATCGTTTATAAGGGTCACA+GGG | 0.676202 | 3_1:-61711290 | None:intergenic |
| GTTTGACACGGAATAATACG+TGG | 0.680737 | 3_1:-61710940 | None:intergenic |
| CTAACAATGAGTCAATACAT+GGG | 0.732939 | 3_1:+61711018 | Msa0366780:exon |
| ATACATGGGTGAGGACAGTG+TGG | 0.741127 | 3_1:+61711032 | Msa0366780:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAATCTTTGTT+TGG | - | chr3_1:61717085-61717104 | None:intergenic | 10.0% |
| !!! | TATTTTGATAAGATAGTTAT+TGG | + | chr3_1:61711683-61711702 | Msa0366780:intron | 15.0% |
| !! | TCAAAACATAAAAGATTTAT+TGG | + | chr3_1:61716412-61716431 | Msa0366780:intron | 15.0% |
| !!! | TAATAATTTTAGTAGTAAGT+GGG | - | chr3_1:61716716-61716735 | None:intergenic | 15.0% |
| !! | AAAATATGGTTCAATATTTA+TGG | - | chr3_1:61716933-61716952 | None:intergenic | 15.0% |
| !! | TATATTAAGTGATTCACATA+TGG | - | chr3_1:61711226-61711245 | None:intergenic | 20.0% |
| !!! | TGTTTGTAAGTTTTTATCAA+TGG | + | chr3_1:61711388-61711407 | Msa0366780:intron | 20.0% |
| !! | AGATTTATGTAGTTTAGATT+GGG | - | chr3_1:61711426-61711445 | None:intergenic | 20.0% |
| !! | TAGATTTATGTAGTTTAGAT+TGG | - | chr3_1:61711427-61711446 | None:intergenic | 20.0% |
| !! | AGAGATTAGTAAGAAAAAAT+CGG | - | chr3_1:61711525-61711544 | None:intergenic | 20.0% |
| !! | AACTATATTCAGAAAATACT+TGG | + | chr3_1:61711587-61711606 | Msa0366780:intron | 20.0% |
| !! | ACTATATTCAGAAAATACTT+GGG | + | chr3_1:61711588-61711607 | Msa0366780:intron | 20.0% |
| !! | TAAAAAAAGCCACATATATT+CGG | + | chr3_1:61712082-61712101 | Msa0366780:intron | 20.0% |
| !!! | TCTGTTTTTTGGAATAATAT+GGG | + | chr3_1:61712675-61712694 | Msa0366780:intron | 20.0% |
| !!! | TTTTCGGTAATATTTTCAAA+AGG | + | chr3_1:61713405-61713424 | Msa0366780:intron | 20.0% |
| !! | CATATTGAAAATAGACTTAA+GGG | + | chr3_1:61713434-61713453 | Msa0366780:intron | 20.0% |
| !!! | GAGTCTTTTAAAATACTTTT+GGG | - | chr3_1:61713723-61713742 | None:intergenic | 20.0% |
| !!! | AGAGTCTTTTAAAATACTTT+TGG | - | chr3_1:61713724-61713743 | None:intergenic | 20.0% |
| !! | CCAATAAGATTATTAAGAAT+GGG | - | chr3_1:61714136-61714155 | None:intergenic | 20.0% |
| !! | AAACAACAAGAAACTTTATT+TGG | + | chr3_1:61715010-61715029 | Msa0366780:intron | 20.0% |
| !! | ATATCATGAATATCTATAAC+CGG | - | chr3_1:61715396-61715415 | None:intergenic | 20.0% |
| !! | TATTCATGATATTCACTTAA+CGG | + | chr3_1:61715404-61715423 | Msa0366780:intron | 20.0% |
| !! | TATAAAAGCTAAGATTACAA+AGG | - | chr3_1:61716663-61716682 | None:intergenic | 20.0% |
| !!! | ACATGGTTGAATTTTTTTTT+TGG | - | chr3_1:61716686-61716705 | None:intergenic | 20.0% |
| !!! | CTAATAATTTTAGTAGTAAG+TGG | - | chr3_1:61716717-61716736 | None:intergenic | 20.0% |
| !!! | TGTATGTTTGATTTCATTTA+TGG | - | chr3_1:61716893-61716912 | None:intergenic | 20.0% |
| !! | ATATACTAGTTGACAAAATA+TGG | - | chr3_1:61716947-61716966 | None:intergenic | 20.0% |
| !! | ATGGATAATAATGTAAAAGT+GGG | - | chr3_1:61716988-61717007 | None:intergenic | 20.0% |
| !! | TATGGATAATAATGTAAAAG+TGG | - | chr3_1:61716989-61717008 | None:intergenic | 20.0% |
| !!! | ATATAGCATAAAGTCAATTT+TGG | + | chr3_1:61717051-61717070 | Msa0366780:intron | 20.0% |
| !!! | TTTTTAAAGAGTTGATTCAT+AGG | + | chr3_1:61717100-61717119 | Msa0366780:intron | 20.0% |
| !!! | TTTTAAAGAGTTGATTCATA+GGG | + | chr3_1:61717101-61717120 | Msa0366780:intron | 20.0% |
| ! | ATTTAGATCTTTGTGATGTT+TGG | - | chr3_1:61710995-61711014 | None:intergenic | 25.0% |
| ! | TTTCCATTATGAATCAAAAC+CGG | - | chr3_1:61711201-61711220 | None:intergenic | 25.0% |
| !!! | CATTTAAGTCCTACTTTTTT+TGG | + | chr3_1:61711470-61711489 | Msa0366780:intron | 25.0% |
| ! | TAAGGTTAACCAAAAAAAGT+AGG | - | chr3_1:61711482-61711501 | None:intergenic | 25.0% |
| !!! | ACTAATCTCTTTTGAGAATT+TGG | + | chr3_1:61711535-61711554 | Msa0366780:intron | 25.0% |
| ! | TTGATAAGATAGTTATTGGT+TGG | + | chr3_1:61711687-61711706 | Msa0366780:intron | 25.0% |
| ! | CATTATGGATAGAATATAGT+GGG | - | chr3_1:61711761-61711780 | None:intergenic | 25.0% |
| ! | ACATTATGGATAGAATATAG+TGG | - | chr3_1:61711762-61711781 | None:intergenic | 25.0% |
| ! | TATATCTCTCGTTAACATTA+TGG | - | chr3_1:61711776-61711795 | None:intergenic | 25.0% |
| ! | ATTAAGTGTGTTTGATTATG+CGG | + | chr3_1:61711868-61711887 | Msa0366780:intron | 25.0% |
| !!! | GTGGCTTTTTTTATTAGAAT+AGG | - | chr3_1:61712075-61712094 | None:intergenic | 25.0% |
| !!! | CTCTGTTTTTTGGAATAATA+TGG | + | chr3_1:61712674-61712693 | Msa0366780:intron | 25.0% |
| ! | TATTTATGGTTATGGAGAAT+TGG | - | chr3_1:61712803-61712822 | None:intergenic | 25.0% |
| ! | ACGACTAATATTTATGGTTA+TGG | - | chr3_1:61712811-61712830 | None:intergenic | 25.0% |
| ! | ATAACCATAAATATTAGTCG+TGG | + | chr3_1:61712810-61712829 | Msa0366780:intron | 25.0% |
| ! | GCATATTGAAAATAGACTTA+AGG | + | chr3_1:61713433-61713452 | Msa0366780:intron | 25.0% |
| ! | CTTTCTTCTAATGATAGTTT+GGG | - | chr3_1:61713627-61713646 | None:intergenic | 25.0% |
| ! | TCTTTCTTCTAATGATAGTT+TGG | - | chr3_1:61713628-61713647 | None:intergenic | 25.0% |
| ! | TTCTTGAAGAATGGTAATAT+CGG | - | chr3_1:61713696-61713715 | None:intergenic | 25.0% |
| !!! | TATTTTTTCTAGTTCGTCAA+TGG | - | chr3_1:61713801-61713820 | None:intergenic | 25.0% |
| !!! | AACACTTCATTTTTAGTGAT+GGG | - | chr3_1:61713836-61713855 | None:intergenic | 25.0% |
| !!! | AAACACTTCATTTTTAGTGA+TGG | - | chr3_1:61713837-61713856 | None:intergenic | 25.0% |
| !!! | GTATCTTTTTCAAGCAATAT+TGG | + | chr3_1:61713912-61713931 | Msa0366780:intron | 25.0% |
| !! | TTTTATAGATGATGTTACAG+AGG | - | chr3_1:61714081-61714100 | None:intergenic | 25.0% |
| ! | CCCATTCTTAATAATCTTAT+TGG | + | chr3_1:61714133-61714152 | Msa0366780:intron | 25.0% |
| ! | GCCAATAAGATTATTAAGAA+TGG | - | chr3_1:61714137-61714156 | None:intergenic | 25.0% |
| !!! | AAGCTTTTGATAATGTTAGA+TGG | + | chr3_1:61714287-61714306 | Msa0366780:intron | 25.0% |
| !!! | AGCTTTTGATAATGTTAGAT+GGG | + | chr3_1:61714288-61714307 | Msa0366780:intron | 25.0% |
| ! | TTCCATAAAACTGATAAAGT+GGG | - | chr3_1:61714391-61714410 | None:intergenic | 25.0% |
| !!! | ACTTTATCAGTTTTATGGAA+CGG | + | chr3_1:61714391-61714410 | Msa0366780:intron | 25.0% |
| ! | TGCAGAGAATGAATAAATAA+GGG | - | chr3_1:61714474-61714493 | None:intergenic | 25.0% |
| ! | ATGCAGAGAATGAATAAATA+AGG | - | chr3_1:61714475-61714494 | None:intergenic | 25.0% |
| ! | TTATTTATTCATTCTCTGCA+TGG | + | chr3_1:61714474-61714493 | Msa0366780:intron | 25.0% |
| ! | CAAACAAATCAGTTAAGAAA+TGG | - | chr3_1:61714642-61714661 | None:intergenic | 25.0% |
| ! | TCATTGAAAAAATGCAAACA+AGG | + | chr3_1:61714854-61714873 | Msa0366780:intron | 25.0% |
| ! | TTTATTTGCATGTAGTAAGA+AGG | - | chr3_1:61714955-61714974 | None:intergenic | 25.0% |
| !! | ATAGAGTCACAAATATTTTG+CGG | - | chr3_1:61714985-61715004 | None:intergenic | 25.0% |
| ! | ATCACTATCCCAAAAAATTA+TGG | + | chr3_1:61715078-61715097 | Msa0366780:intron | 25.0% |
| ! | AAATATTCTTCAAGCAAATG+CGG | + | chr3_1:61715227-61715246 | Msa0366780:intron | 25.0% |
| ! | TATCAGAGGTAATAATATCA+CGG | - | chr3_1:61715431-61715450 | None:intergenic | 25.0% |
| ! | AATGAGGAATTTGTATTTCT+CGG | - | chr3_1:61715685-61715704 | None:intergenic | 25.0% |
| ! | AGAAATACAAATTCCTCATT+TGG | + | chr3_1:61715685-61715704 | Msa0366780:intron | 25.0% |
| ! | TAAAAGATTTATTGGACTCA+CGG | + | chr3_1:61716420-61716439 | Msa0366780:intron | 25.0% |
| ! | CTAAGATTACAAAGGAAAAA+GGG | - | chr3_1:61716655-61716674 | None:intergenic | 25.0% |
| ! | AAAAAATTCAACCATGTTCT+AGG | + | chr3_1:61716689-61716708 | Msa0366780:intron | 25.0% |
| !!! | TTCACTTTTACACGAATAAT+GGG | - | chr3_1:61716745-61716764 | None:intergenic | 25.0% |
| !!! | ATTCACTTTTACACGAATAA+TGG | - | chr3_1:61716746-61716765 | None:intergenic | 25.0% |
| !! | TGTTTGATTTCATTTATGGA+GGG | - | chr3_1:61716889-61716908 | None:intergenic | 25.0% |
| !! | ATGTTTGATTTCATTTATGG+AGG | - | chr3_1:61716890-61716909 | None:intergenic | 25.0% |
| ! | ATGAAATCAAACATACACAT+AGG | + | chr3_1:61716896-61716915 | Msa0366780:intron | 25.0% |
| ! | GGTAAAAAGAAGTTTATAGA+AGG | + | chr3_1:61717216-61717235 | Msa0366780:CDS | 25.0% |
| !! | TTTTACACTTACGAGATATA+TGG | + | chr3_1:61717336-61717355 | Msa0366780:CDS | 25.0% |
| ! | TTTACACTTACGAGATATAT+GGG | + | chr3_1:61717337-61717356 | Msa0366780:CDS | 25.0% |
| TCTAACAATGAGTCAATACA+TGG | + | chr3_1:61711017-61711036 | Msa0366780:exon | 30.0% | |
| CTAACAATGAGTCAATACAT+GGG | + | chr3_1:61711018-61711037 | Msa0366780:exon | 30.0% | |
| !! | TTTGCTTTTAGAAAAGAACC+CGG | + | chr3_1:61711161-61711180 | Msa0366780:CDS | 30.0% |
| TTCCATTATGAATCAAAACC+GGG | - | chr3_1:61711200-61711219 | None:intergenic | 30.0% | |
| ! | TAGCTTGTGATCGTTTATAA+GGG | - | chr3_1:61711301-61711320 | None:intergenic | 30.0% |
| !! | TTAGCTTGTGATCGTTTATA+AGG | - | chr3_1:61711302-61711321 | None:intergenic | 30.0% |
| TTTATGTAGTTTAGATTGGG+AGG | - | chr3_1:61711423-61711442 | None:intergenic | 30.0% | |
| GATTAGTAAGAAAAAATCGG+AGG | - | chr3_1:61711522-61711541 | None:intergenic | 30.0% | |
| TTTCTGAATATAGTTGAGAG+TGG | - | chr3_1:61711582-61711601 | None:intergenic | 30.0% | |
| !!! | GAATATAGTGGGTTACATTT+TGG | - | chr3_1:61711750-61711769 | None:intergenic | 30.0% |
| !!! | TTGTTGTGACTGTTTTTGTT+AGG | - | chr3_1:61712339-61712358 | None:intergenic | 30.0% |
| TGATCAAGATCAAAATCATG+CGG | + | chr3_1:61712428-61712447 | Msa0366780:intron | 30.0% | |
| ATACACATTATTGAAGCCAA+CGG | + | chr3_1:61712708-61712727 | Msa0366780:intron | 30.0% | |
| ATTGCCACGACTAATATTTA+TGG | - | chr3_1:61712817-61712836 | None:intergenic | 30.0% | |
| !!! | CAAGTTTTTTAGAGAGGATA+CGG | - | chr3_1:61713112-61713131 | None:intergenic | 30.0% |
| !!! | TTCTGTCAAGTTTTTTAGAG+AGG | - | chr3_1:61713118-61713137 | None:intergenic | 30.0% |
| !! | TTTTTCTTGAACCTCTGAAA+GGG | - | chr3_1:61713363-61713382 | None:intergenic | 30.0% |
| ! | ATTTTTCTTGAACCTCTGAA+AGG | - | chr3_1:61713364-61713383 | None:intergenic | 30.0% |
| ! | ATTTTCAACCACGAAGTTTT+CGG | + | chr3_1:61713389-61713408 | Msa0366780:intron | 30.0% |
| AAATATTACCGAAAACTTCG+TGG | - | chr3_1:61713400-61713419 | None:intergenic | 30.0% | |
| TAAGGGAGTCCAAAATTATT+TGG | + | chr3_1:61713451-61713470 | Msa0366780:intron | 30.0% | |
| ! | CAACTCTCTCCAAATAATTT+TGG | - | chr3_1:61713463-61713482 | None:intergenic | 30.0% |
| ACCAAAAATCTAGAGAACAA+TGG | + | chr3_1:61713564-61713583 | Msa0366780:intron | 30.0% | |
| CCAAAAATCTAGAGAACAAT+GGG | + | chr3_1:61713565-61713584 | Msa0366780:intron | 30.0% | |
| AAGATACAATGAAAACCATC+TGG | - | chr3_1:61713899-61713918 | None:intergenic | 30.0% | |
| AAGCAATATTGGCATATAGT+TGG | + | chr3_1:61713923-61713942 | Msa0366780:intron | 30.0% | |
| ! | TGGAGAAGATATTTTTCATC+TGG | + | chr3_1:61713943-61713962 | Msa0366780:intron | 30.0% |
| !! | ATGAGAGTATTTGAAATCTC+CGG | - | chr3_1:61714001-61714020 | None:intergenic | 30.0% |
| !! | TGATAACTCTATTGTTTTGC+AGG | + | chr3_1:61714195-61714214 | Msa0366780:intron | 30.0% |
| GTTCCATAAAACTGATAAAG+TGG | - | chr3_1:61714392-61714411 | None:intergenic | 30.0% | |
| GCAGAGAATGAATAAATAAG+GGG | - | chr3_1:61714473-61714492 | None:intergenic | 30.0% | |
| GAATTGTGAGTTATTTGCTT+TGG | - | chr3_1:61714620-61714639 | None:intergenic | 30.0% | |
| !!! | AGATTGTTGATTTTATCCTG+GGG | - | chr3_1:61714736-61714755 | None:intergenic | 30.0% |
| !!! | GAGATTGTTGATTTTATCCT+GGG | - | chr3_1:61714737-61714756 | None:intergenic | 30.0% |
| !!! | TGAGATTGTTGATTTTATCC+TGG | - | chr3_1:61714738-61714757 | None:intergenic | 30.0% |
| TGAAAAAATGCAAACAAGGT+TGG | + | chr3_1:61714858-61714877 | Msa0366780:intron | 30.0% | |
| CTTACTACATGCAAATAAAC+TGG | + | chr3_1:61714956-61714975 | Msa0366780:intron | 30.0% | |
| ! | CAACAAGAAACTTTATTTGG+CGG | + | chr3_1:61715013-61715032 | Msa0366780:intron | 30.0% |
| ! | AACAAGAAACTTTATTTGGC+GGG | + | chr3_1:61715014-61715033 | Msa0366780:intron | 30.0% |
| !! | TAATAACAAGGGTATTCACT+TGG | + | chr3_1:61715041-61715060 | Msa0366780:intron | 30.0% |
| ACTATCCCAAAAAATTATGG+TGG | + | chr3_1:61715081-61715100 | Msa0366780:intron | 30.0% | |
| !!! | CCAAACCACCATAATTTTTT+GGG | - | chr3_1:61715089-61715108 | None:intergenic | 30.0% |
| CCAAAAAATTATGGTGGTTT+GGG | + | chr3_1:61715087-61715106 | Msa0366780:intron | 30.0% | |
| CATGCAAATATTTGTCTTCT+TGG | + | chr3_1:61715126-61715145 | Msa0366780:intron | 30.0% | |
| !!! | CTGATGAGTATTTTGATGAA+AGG | - | chr3_1:61715203-61715222 | None:intergenic | 30.0% |
| CTTTCATCAAAATACTCATC+AGG | + | chr3_1:61715201-61715220 | Msa0366780:intron | 30.0% | |
| CCAAATGAAAATATCATCGA+CGG | - | chr3_1:61715538-61715557 | None:intergenic | 30.0% | |
| ! | CGTCGATGATATTTTCATTT+GGG | + | chr3_1:61715536-61715555 | Msa0366780:intron | 30.0% |
| ATGAGGAATTTGTATTTCTC+GGG | - | chr3_1:61715684-61715703 | None:intergenic | 30.0% | |
| ACAATTGTTTGCGAAGAAAT+GGG | - | chr3_1:61715877-61715896 | None:intergenic | 30.0% | |
| CAAACAATTGTGCTTATGAT+TGG | + | chr3_1:61715886-61715905 | Msa0366780:intron | 30.0% | |
| TGTGCTTATGATTGGATTAA+AGG | + | chr3_1:61715894-61715913 | Msa0366780:intron | 30.0% | |
| !! | ATCTTTCACACTTTTAGAGA+AGG | + | chr3_1:61716452-61716471 | Msa0366780:intron | 30.0% |
| !! | TCTTTCACACTTTTAGAGAA+GGG | + | chr3_1:61716453-61716472 | Msa0366780:intron | 30.0% |
| CAAGTAACAATCATTTGATG+AGG | - | chr3_1:61716513-61716532 | None:intergenic | 30.0% | |
| CTCATCAAATGATTGTTACT+TGG | + | chr3_1:61716511-61716530 | Msa0366780:intron | 30.0% | |
| GCTAAGATTACAAAGGAAAA+AGG | - | chr3_1:61716656-61716675 | None:intergenic | 30.0% | |
| ! | GTATCATGGCTTAATTTTGT+TGG | + | chr3_1:61717123-61717142 | Msa0366780:intron | 30.0% |
| TGTTGGATTCTAATTCATGT+AGG | + | chr3_1:61717140-61717159 | Msa0366780:intron | 30.0% | |
| AAGTCATCTCCATCAAAATA+TGG | - | chr3_1:61717276-61717295 | None:intergenic | 30.0% | |
| !!! | TATTTTGATGGAGATGACTT+TGG | + | chr3_1:61717276-61717295 | Msa0366780:CDS | 30.0% |
| !! | ATTTTGATGGAGATGACTTT+GGG | + | chr3_1:61717277-61717296 | Msa0366780:CDS | 30.0% |
| ! | CAAAACCATAGATTTTGTGT+GGG | - | chr3_1:61717452-61717471 | None:intergenic | 30.0% |
| ATGCAATATAAACAAAGCCA+TGG | + | chr3_1:61717474-61717493 | Msa0366780:CDS | 30.0% | |
| ! | TTGTGCATTCTTGTTTGACA+CGG | - | chr3_1:61710955-61710974 | None:intergenic | 35.0% |
| !!! | GTGTGGTTTTGTTGGATTTT+TGG | + | chr3_1:61711049-61711068 | Msa0366780:CDS | 35.0% |
| AATGAGAGTGAAAATCGCTT+TGG | + | chr3_1:61711086-61711105 | Msa0366780:CDS | 35.0% | |
| !! | AAAATCGCTTTGGAAGAGAA+GGG | + | chr3_1:61711096-61711115 | Msa0366780:CDS | 35.0% |
| !!! | ATCCCGGTTTTGATTCATAA+TGG | + | chr3_1:61711195-61711214 | Msa0366780:CDS | 35.0% |
| ! | AACGATCACAAGCTAAGTTT+TGG | + | chr3_1:61711306-61711325 | Msa0366780:CDS | 35.0% |
| ! | ACGATCACAAGCTAAGTTTT+GGG | + | chr3_1:61711307-61711326 | Msa0366780:CDS | 35.0% |
| GATACTTCACACTGATAGTA+AGG | - | chr3_1:61711500-61711519 | None:intergenic | 35.0% | |
| ! | AATTTGGCTAGCCATATTTG+TGG | + | chr3_1:61711551-61711570 | Msa0366780:intron | 35.0% |
| ! | ATTTGGCTAGCCATATTTGT+GGG | + | chr3_1:61711552-61711571 | Msa0366780:intron | 35.0% |
| !! | GTTAGTAATTGGTGGCTTTT+TGG | - | chr3_1:61712238-61712257 | None:intergenic | 35.0% |
| ! | GATGAAGTGGTGTTAGTAAT+TGG | - | chr3_1:61712249-61712268 | None:intergenic | 35.0% |
| GATAGTGTCTTTAGATGAAG+TGG | - | chr3_1:61712262-61712281 | None:intergenic | 35.0% | |
| ! | GTTTTCATGTGTTGTAGCAA+GGG | - | chr3_1:61712382-61712401 | None:intergenic | 35.0% |
| ! | TGTTTTCATGTGTTGTAGCA+AGG | - | chr3_1:61712383-61712402 | None:intergenic | 35.0% |
| GACACTTGAAAGATTTGATC+AGG | + | chr3_1:61712595-61712614 | Msa0366780:intron | 35.0% | |
| CATGAATTGAGATAAGTGAG+CGG | - | chr3_1:61713018-61713037 | None:intergenic | 35.0% | |
| TCATAACAACAATGTCACGA+CGG | + | chr3_1:61713337-61713356 | Msa0366780:intron | 35.0% | |
| GAAAACTTCGTGGTTGAAAA+TGG | - | chr3_1:61713390-61713409 | None:intergenic | 35.0% | |
| !!! | CTGCAATTCTTTTTCGAGAA+GGG | - | chr3_1:61713501-61713520 | None:intergenic | 35.0% |
| ! | AAAGCATTTCTTCTTGGAAG+AGG | - | chr3_1:61713541-61713560 | None:intergenic | 35.0% |
| TCTTCCAAGAAGAAATGCTT+TGG | + | chr3_1:61713540-61713559 | Msa0366780:intron | 35.0% | |
| ! | CCCATTGTTCTCTAGATTTT+TGG | - | chr3_1:61713568-61713587 | None:intergenic | 35.0% |
| ! | CATTTGGTAGTTGGAGTTTA+TGG | - | chr3_1:61713661-61713680 | None:intergenic | 35.0% |
| CATAAACTCCAACTACCAAA+TGG | + | chr3_1:61713659-61713678 | Msa0366780:intron | 35.0% | |
| TTGAAGAATGGTAATATCGG+AGG | - | chr3_1:61713693-61713712 | None:intergenic | 35.0% | |
| !!! | TTTTCTAGTTCGTCAATGGT+GGG | - | chr3_1:61713797-61713816 | None:intergenic | 35.0% |
| !!! | TTTTTCTAGTTCGTCAATGG+TGG | - | chr3_1:61713798-61713817 | None:intergenic | 35.0% |
| !!! | TTCATTTTTAGTGATGGGTG+AGG | - | chr3_1:61713831-61713850 | None:intergenic | 35.0% |
| CTGAAATCTTTGTAGGTGAT+GGG | - | chr3_1:61714049-61714068 | None:intergenic | 35.0% | |
| ! | TCTGAAATCTTTGTAGGTGA+TGG | - | chr3_1:61714050-61714069 | None:intergenic | 35.0% |
| ! | GATAGGTCTGAAATCTTTGT+AGG | - | chr3_1:61714056-61714075 | None:intergenic | 35.0% |
| AGAAGATCCAAGAAGAAGAA+GGG | + | chr3_1:61714235-61714254 | Msa0366780:intron | 35.0% | |
| ACAATGCATGATGAGTTTGA+TGG | - | chr3_1:61714359-61714378 | None:intergenic | 35.0% | |
| ! | CACCCACTTTATCAGTTTTA+TGG | + | chr3_1:61714386-61714405 | Msa0366780:intron | 35.0% |
| TGAATAAATAAGGGGAGAGT+GGG | - | chr3_1:61714465-61714484 | None:intergenic | 35.0% | |
| ATGAATAAATAAGGGGAGAG+TGG | - | chr3_1:61714466-61714485 | None:intergenic | 35.0% | |
| ! | GAACCGATTCAAATCACTAA+CGG | + | chr3_1:61714544-61714563 | Msa0366780:intron | 35.0% |
| AAGAGTAAATGCGAAATCCT+CGG | - | chr3_1:61714574-61714593 | None:intergenic | 35.0% | |
| ATTTGTTTGACAGATTCAGC+AGG | + | chr3_1:61714653-61714672 | Msa0366780:intron | 35.0% | |
| TTTGTTTGACAGATTCAGCA+GGG | + | chr3_1:61714654-61714673 | Msa0366780:intron | 35.0% | |
| !! | AGAGTAAAAAGCTCTAGACT+TGG | - | chr3_1:61714704-61714723 | None:intergenic | 35.0% |
| !! | TCTAGAGCTTTTTACTCTTC+AGG | + | chr3_1:61714706-61714725 | Msa0366780:intron | 35.0% |
| ! | CTAGAGCTTTTTACTCTTCA+GGG | + | chr3_1:61714707-61714726 | Msa0366780:intron | 35.0% |
| AACAATCTCACAGCTATATC+TGG | + | chr3_1:61714748-61714767 | Msa0366780:intron | 35.0% | |
| ! | AAGTTGAAGTCGCTTCTTTT+CGG | - | chr3_1:61714832-61714851 | None:intergenic | 35.0% |
| TTGCATGTAGTAAGAAGGAA+TGG | - | chr3_1:61714950-61714969 | None:intergenic | 35.0% | |
| ! | ACAAGAAACTTTATTTGGCG+GGG | + | chr3_1:61715015-61715034 | Msa0366780:intron | 35.0% |
| CCCAAAAAATTATGGTGGTT+TGG | + | chr3_1:61715086-61715105 | Msa0366780:intron | 35.0% | |
| !!! | CCCAAACCACCATAATTTTT+TGG | - | chr3_1:61715090-61715109 | None:intergenic | 35.0% |
| ! | TCTTCTTGGAAAGCTAGTTT+GGG | + | chr3_1:61715140-61715159 | Msa0366780:intron | 35.0% |
| TCCAATCCATGAATAAGCTT+TGG | + | chr3_1:61715169-61715188 | Msa0366780:intron | 35.0% | |
| CCAATCCATGAATAAGCTTT+GGG | + | chr3_1:61715170-61715189 | Msa0366780:intron | 35.0% | |
| ! | TATAAAGTGCTTGAGTGTGA+GGG | - | chr3_1:61715455-61715474 | None:intergenic | 35.0% |
| ATGAAAATATCATCGACGGT+TGG | - | chr3_1:61715534-61715553 | None:intergenic | 35.0% | |
| ! | CCGTCGATGATATTTTCATT+TGG | + | chr3_1:61715535-61715554 | Msa0366780:intron | 35.0% |
| ! | ATTTGGGACCATAACAAGAA+CGG | + | chr3_1:61715552-61715571 | Msa0366780:intron | 35.0% |
| CAACTAAAAGTGGCTATTCA+TGG | + | chr3_1:61715583-61715602 | Msa0366780:intron | 35.0% | |
| ATACAAATTCCTCATTTGGC+TGG | + | chr3_1:61715689-61715708 | Msa0366780:intron | 35.0% | |
| !!! | GCACGTTTTCTAAAACTGTT+TGG | + | chr3_1:61715829-61715848 | Msa0366780:intron | 35.0% |
| AAAACTGTTTGGCAGCAATT+CGG | + | chr3_1:61715840-61715859 | Msa0366780:intron | 35.0% | |
| CACAATTGTTTGCGAAGAAA+TGG | - | chr3_1:61715878-61715897 | None:intergenic | 35.0% | |
| TGGATTAAAGGTAATGCCAA+AGG | + | chr3_1:61715906-61715925 | Msa0366780:intron | 35.0% | |
| TGAACTAACAGCAATTCACA+AGG | + | chr3_1:61716271-61716290 | Msa0366780:intron | 35.0% | |
| GAACTAACAGCAATTCACAA+GGG | + | chr3_1:61716272-61716291 | Msa0366780:intron | 35.0% | |
| !! | TGATGGTTTAGTTTGCTTCT+CGG | + | chr3_1:61716322-61716341 | Msa0366780:intron | 35.0% |
| CTTTCTGTTAATCTCATCAC+AGG | + | chr3_1:61716353-61716372 | Msa0366780:intron | 35.0% | |
| TGTTAATCTCATCACAGGAT+CGG | + | chr3_1:61716358-61716377 | Msa0366780:intron | 35.0% | |
| !! | CTTTCACACTTTTAGAGAAG+GGG | + | chr3_1:61716454-61716473 | Msa0366780:intron | 35.0% |
| AAGGGAAACAAACAGAAACA+AGG | - | chr3_1:61716637-61716656 | None:intergenic | 35.0% | |
| ! | AGTTGATTCATAGGGTATCA+TGG | + | chr3_1:61717109-61717128 | Msa0366780:intron | 35.0% |
| TGACTTTGGGTATGATGATT+TGG | + | chr3_1:61717290-61717309 | Msa0366780:CDS | 35.0% | |
| GTGTAAAACCAACTAGTGAA+GGG | - | chr3_1:61717324-61717343 | None:intergenic | 35.0% | |
| AGTGTAAAACCAACTAGTGA+AGG | - | chr3_1:61717325-61717344 | None:intergenic | 35.0% | |
| ! | CTCTTTTTCCATACACCTTT+TGG | - | chr3_1:61717406-61717425 | None:intergenic | 35.0% |
| ! | GCAAAACCATAGATTTTGTG+TGG | - | chr3_1:61717453-61717472 | None:intergenic | 35.0% |
| GTTTGACACGGAATAATACG+TGG | - | chr3_1:61710943-61710962 | None:intergenic | 40.0% | |
| AATGAGTCAATACATGGGTG+AGG | + | chr3_1:61711023-61711042 | Msa0366780:exon | 40.0% | |
| !! | GAAAATCGCTTTGGAAGAGA+AGG | + | chr3_1:61711095-61711114 | Msa0366780:CDS | 40.0% |
| ! | ACCGGGATCTTTTTGTAAAC+CGG | - | chr3_1:61711183-61711202 | None:intergenic | 40.0% |
| TCGAGTACATTGATGAAGCT+TGG | + | chr3_1:61711247-61711266 | Msa0366780:CDS | 40.0% | |
| GATCGTTTATAAGGGTCACA+GGG | - | chr3_1:61711293-61711312 | None:intergenic | 40.0% | |
| TGATCGTTTATAAGGGTCAC+AGG | - | chr3_1:61711294-61711313 | None:intergenic | 40.0% | |
| ! | CGATCACAAGCTAAGTTTTG+GGG | + | chr3_1:61711308-61711327 | Msa0366780:CDS | 40.0% |
| TGTAGTTTAGATTGGGAGGT+TGG | - | chr3_1:61711419-61711438 | None:intergenic | 40.0% | |
| ! | TTTGGCTAGCCATATTTGTG+GGG | + | chr3_1:61711553-61711572 | Msa0366780:intron | 40.0% |
| AAAGCAAGAGTCTTACCCTT+GGG | - | chr3_1:61711998-61712017 | None:intergenic | 40.0% | |
| TAAAGCAAGAGTCTTACCCT+TGG | - | chr3_1:61711999-61712018 | None:intergenic | 40.0% | |
| AAATGCGACACATACACACA+TGG | + | chr3_1:61712200-61712219 | Msa0366780:intron | 40.0% | |
| AATGCGACACATACACACAT+GGG | + | chr3_1:61712201-61712220 | Msa0366780:intron | 40.0% | |
| !! | AGTAATTGGTGGCTTTTTGG+TGG | - | chr3_1:61712235-61712254 | None:intergenic | 40.0% |
| ! | GAAGTGGTGTTAGTAATTGG+TGG | - | chr3_1:61712246-61712265 | None:intergenic | 40.0% |
| !! | GATGTAATTGGTTCGGTCAT+GGG | - | chr3_1:61712291-61712310 | None:intergenic | 40.0% |
| AGGCATGGATGTAATTGGTT+CGG | - | chr3_1:61712298-61712317 | None:intergenic | 40.0% | |
| GGAATAGGCATGGATGTAAT+TGG | - | chr3_1:61712303-61712322 | None:intergenic | 40.0% | |
| GAGAGTTATTGGAATAGGCA+TGG | - | chr3_1:61712313-61712332 | None:intergenic | 40.0% | |
| TTGTTAGGCTGGAGAGTTAT+TGG | - | chr3_1:61712324-61712343 | None:intergenic | 40.0% | |
| !!! | TGTGACTGTTTTTGTTAGGC+TGG | - | chr3_1:61712335-61712354 | None:intergenic | 40.0% |
| TGAAAATGACCTCAACGAAG+AGG | + | chr3_1:61712452-61712471 | Msa0366780:intron | 40.0% | |
| ATAACATGTCCTCTTCGTTG+AGG | - | chr3_1:61712464-61712483 | None:intergenic | 40.0% | |
| ! | TTGATGGTACAAAGAGAGGA+GGG | - | chr3_1:61712493-61712512 | None:intergenic | 40.0% |
| !! | GTAGTTGATGGTACAAAGAG+AGG | - | chr3_1:61712497-61712516 | None:intergenic | 40.0% |
| CGATTACACACAGTAGTTGA+TGG | - | chr3_1:61712509-61712528 | None:intergenic | 40.0% | |
| TCAATGATAGCCATGAAGGT+CGG | - | chr3_1:61712630-61712649 | None:intergenic | 40.0% | |
| GGTTTCAATGATAGCCATGA+AGG | - | chr3_1:61712634-61712653 | None:intergenic | 40.0% | |
| AAAAACAGAGAGCTTTGCGA+AGG | - | chr3_1:61712664-61712683 | None:intergenic | 40.0% | |
| !!! | TCGCAAAGCTCTCTGTTTTT+TGG | + | chr3_1:61712664-61712683 | Msa0366780:intron | 40.0% |
| GAATTGGTTAGAGTCAAGGA+TGG | - | chr3_1:61712787-61712806 | None:intergenic | 40.0% | |
| TGGAGAATTGGTTAGAGTCA+AGG | - | chr3_1:61712791-61712810 | None:intergenic | 40.0% | |
| TGAGGTAAGACCAAAGGTTA+GGG | - | chr3_1:61712890-61712909 | None:intergenic | 40.0% | |
| TGTTTGTGAGGTAAGACCAA+AGG | - | chr3_1:61712896-61712915 | None:intergenic | 40.0% | |
| ! | TGGCTTGTCTAATGTTTGTG+AGG | - | chr3_1:61712908-61712927 | None:intergenic | 40.0% |
| TTGCTTGATCTTACAACCAC+AGG | + | chr3_1:61713050-61713069 | Msa0366780:intron | 40.0% | |
| TACGGATGCCATTATTGTTC+CGG | - | chr3_1:61713094-61713113 | None:intergenic | 40.0% | |
| ! | TTTTCCGGAAGCTTTTGTTG+AGG | + | chr3_1:61713166-61713185 | Msa0366780:intron | 40.0% |
| CTATCCAAGCTGCTTCAAAA+CGG | - | chr3_1:61713274-61713293 | None:intergenic | 40.0% | |
| ! | ATTGTTGTTATGAGAGAGCC+AGG | - | chr3_1:61713330-61713349 | None:intergenic | 40.0% |
| AACTTCGTGGTTGAAAATGG+TGG | - | chr3_1:61713387-61713406 | None:intergenic | 40.0% | |
| !!! | ATTCTTTTTCGAGAAGGGTG+TGG | - | chr3_1:61713496-61713515 | None:intergenic | 40.0% |
| !!! | GCTGCAATTCTTTTTCGAGA+AGG | - | chr3_1:61713502-61713521 | None:intergenic | 40.0% |
| TTTCTTCTTGGAAGAGGATG+TGG | - | chr3_1:61713535-61713554 | None:intergenic | 40.0% | |
| ! | GGTACCAAAGCATTTCTTCT+TGG | - | chr3_1:61713547-61713566 | None:intergenic | 40.0% |
| AGAGAACAATGGGTCAAGTT+CGG | + | chr3_1:61713575-61713594 | Msa0366780:intron | 40.0% | |
| GATAGTTTGGGCATGAAAGA+AGG | - | chr3_1:61713615-61713634 | None:intergenic | 40.0% | |
| TCCAACTACCAAATGGCATA+TGG | + | chr3_1:61713666-61713685 | Msa0366780:intron | 40.0% | |
| ! | TCCATATGCCATTTGGTAGT+TGG | - | chr3_1:61713670-61713689 | None:intergenic | 40.0% |
| TTGGGCTTCTTCTTGAAGAA+TGG | - | chr3_1:61713705-61713724 | None:intergenic | 40.0% | |
| !! | TTTAGTGATGGGTGAGGTTA+GGG | - | chr3_1:61713825-61713844 | None:intergenic | 40.0% |
| !!! | TTTTAGTGATGGGTGAGGTT+AGG | - | chr3_1:61713826-61713845 | None:intergenic | 40.0% |
| ATCAAAGTGACCTGTTTGGA+AGG | - | chr3_1:61713978-61713997 | None:intergenic | 40.0% | |
| ATGATGTTACAGAGGCTGAT+AGG | - | chr3_1:61714073-61714092 | None:intergenic | 40.0% | |
| GCAGAAAACTGCTTTGGTAT+GGG | - | chr3_1:61714159-61714178 | None:intergenic | 40.0% | |
| GAGAAGATCCAAGAAGAAGA+AGG | + | chr3_1:61714234-61714253 | Msa0366780:intron | 40.0% | |
| !! | ATGAGTTTGATGGTGATGTC+CGG | - | chr3_1:61714349-61714368 | None:intergenic | 40.0% |
| CCTCCGTTAGTGATTTGAAT+CGG | - | chr3_1:61714550-61714569 | None:intergenic | 40.0% | |
| CGATTCAAATCACTAACGGA+GGG | + | chr3_1:61714548-61714567 | Msa0366780:intron | 40.0% | |
| ACGTCTCTTGGAAAATACCT+CGG | + | chr3_1:61714784-61714803 | Msa0366780:intron | 40.0% | |
| ! | AGTTGAAGTCGCTTCTTTTC+GGG | - | chr3_1:61714831-61714850 | None:intergenic | 40.0% |
| ! | AGGGTATTCACTTGGTAAGT+TGG | + | chr3_1:61715049-61715068 | Msa0366780:intron | 40.0% |
| ! | TGGTGGTTTGGGTATTAGAA+CGG | + | chr3_1:61715098-61715117 | Msa0366780:intron | 40.0% |
| GTCTTCTTGGAAAGCTAGTT+TGG | + | chr3_1:61715139-61715158 | Msa0366780:intron | 40.0% | |
| ! | TGGAAAGCTAGTTTGGGATT+TGG | + | chr3_1:61715146-61715165 | Msa0366780:intron | 40.0% |
| CCCAAAGCTTATTCATGGAT+TGG | - | chr3_1:61715173-61715192 | None:intergenic | 40.0% | |
| ATGCACCCAAAGCTTATTCA+TGG | - | chr3_1:61715178-61715197 | None:intergenic | 40.0% | |
| GCCAAAGATATGCTCAAAAG+CGG | + | chr3_1:61715288-61715307 | Msa0366780:intron | 40.0% | |
| CCAAAGATATGCTCAAAAGC+GGG | + | chr3_1:61715289-61715308 | Msa0366780:intron | 40.0% | |
| ! | GTATAAAGTGCTTGAGTGTG+AGG | - | chr3_1:61715456-61715475 | None:intergenic | 40.0% |
| ! | CGGTTGGATTGAATTTTGCT+TGG | - | chr3_1:61715518-61715537 | None:intergenic | 40.0% |
| ! | TTTGGGACCATAACAAGAAC+GGG | + | chr3_1:61715553-61715572 | Msa0366780:intron | 40.0% |
| ACATCTTTCTTGCTTGTCTC+TGG | + | chr3_1:61715940-61715959 | Msa0366780:intron | 40.0% | |
| TGTGCATCAACAACGAAACA+TGG | + | chr3_1:61715988-61716007 | Msa0366780:intron | 40.0% | |
| GAAACAGACCTGCATTATTG+CGG | - | chr3_1:61716202-61716221 | None:intergenic | 40.0% | |
| GAAGAATGCAAGCAGAATCT+TGG | - | chr3_1:61716247-61716266 | None:intergenic | 40.0% | |
| TCTCAATTTAGCAGCAGACA+TGG | + | chr3_1:61716295-61716314 | Msa0366780:intron | 40.0% | |
| CTCAATTTAGCAGCAGACAT+GGG | + | chr3_1:61716296-61716315 | Msa0366780:intron | 40.0% | |
| TTCTAAGTTCCACGTCTATG+CGG | + | chr3_1:61716382-61716401 | Msa0366780:intron | 40.0% | |
| AGCAAGTGTATGAGATCATG+GGG | - | chr3_1:61716551-61716570 | None:intergenic | 40.0% | |
| CAGCAAGTGTATGAGATCAT+GGG | - | chr3_1:61716552-61716571 | None:intergenic | 40.0% | |
| ! | AACAAGAAACACAGAGCACT+AGG | - | chr3_1:61716609-61716628 | None:intergenic | 40.0% |
| CTTTCATGTGATAGCCACTT+GGG | - | chr3_1:61717019-61717038 | None:intergenic | 40.0% | |
| TGTAGGTATACAGCATTCGA+AGG | + | chr3_1:61717157-61717176 | Msa0366780:intron | 40.0% | |
| ATTCGAAGGAAGCTATGGAA+AGG | + | chr3_1:61717171-61717190 | Msa0366780:CDS | 40.0% | |
| AAGGAAGCTATGGAAAGGAA+AGG | + | chr3_1:61717176-61717195 | Msa0366780:CDS | 40.0% | |
| AGGAAAGGTTGAAGAACAAG+AGG | + | chr3_1:61717191-61717210 | Msa0366780:CDS | 40.0% | |
| AAGGTTGAAGAACAAGAGGA+AGG | + | chr3_1:61717195-61717214 | Msa0366780:CDS | 40.0% | |
| !! | GGAGACAAGCCATATTTTGA+TGG | + | chr3_1:61717264-61717283 | Msa0366780:CDS | 40.0% |
| CTCTTATACCCTTCACTAGT+TGG | + | chr3_1:61717313-61717332 | Msa0366780:CDS | 40.0% | |
| GTGTATGGAAAAAGAGAGTG+TGG | + | chr3_1:61717410-61717429 | Msa0366780:CDS | 40.0% | |
| !!! | TGAGGACAGTGTGGTTTTGT+TGG | + | chr3_1:61711041-61711060 | Msa0366780:CDS | 45.0% |
| ACTCTCATTGCATACACGCT+TGG | - | chr3_1:61711075-61711094 | None:intergenic | 45.0% | |
| ! | CCGGGATCTTTTTGTAAACC+GGG | - | chr3_1:61711182-61711201 | None:intergenic | 45.0% |
| CCCGGTTTACAAAAAGATCC+CGG | + | chr3_1:61711179-61711198 | Msa0366780:CDS | 45.0% | |
| ATTATTGCAGTGTCTGCCCA+AGG | + | chr3_1:61711979-61711998 | Msa0366780:intron | 45.0% | |
| TTATTGCAGTGTCTGCCCAA+GGG | + | chr3_1:61711980-61711999 | Msa0366780:intron | 45.0% | |
| ATTGCTGCGCCGAATATATG+TGG | - | chr3_1:61712094-61712113 | None:intergenic | 45.0% | |
| TTTGTGGTCATGCCAAGGAT+TGG | - | chr3_1:61712183-61712202 | None:intergenic | 45.0% | |
| GTGTGTATGTGTCGCATTTG+TGG | - | chr3_1:61712199-61712218 | None:intergenic | 45.0% | |
| !! | GGATGTAATTGGTTCGGTCA+TGG | - | chr3_1:61712292-61712311 | None:intergenic | 45.0% |
| GGCTGGAGAGTTATTGGAAT+AGG | - | chr3_1:61712318-61712337 | None:intergenic | 45.0% | |
| ! | GTTGTAGCAAGGGCATGTAT+TGG | - | chr3_1:61712372-61712391 | None:intergenic | 45.0% |
| !! | GTTGATGGTACAAAGAGAGG+AGG | - | chr3_1:61712494-61712513 | None:intergenic | 45.0% |
| TCGACACTACATTCCTCTCT+TGG | + | chr3_1:61712538-61712557 | Msa0366780:intron | 45.0% | |
| TTCCTCTCTTGGAACATCAG+AGG | + | chr3_1:61712549-61712568 | Msa0366780:intron | 45.0% | |
| TCCTCTCTTGGAACATCAGA+GGG | + | chr3_1:61712550-61712569 | Msa0366780:intron | 45.0% | |
| ATGAAGGAGCCATATTCCTC+CGG | - | chr3_1:61712739-61712758 | None:intergenic | 45.0% | |
| TGTTGCTAGCGGAATGATGA+AGG | - | chr3_1:61712755-61712774 | None:intergenic | 45.0% | |
| TTGGTTAGAGTCAAGGATGG+TGG | - | chr3_1:61712784-61712803 | None:intergenic | 45.0% | |
| GTGAGGTAAGACCAAAGGTT+AGG | - | chr3_1:61712891-61712910 | None:intergenic | 45.0% | |
| GATGTCCCTTGGATGCTAAT+AGG | + | chr3_1:61712930-61712949 | Msa0366780:intron | 45.0% | |
| AGTCGCCTATTAGCATCCAA+GGG | - | chr3_1:61712938-61712957 | None:intergenic | 45.0% | |
| AAGTCGCCTATTAGCATCCA+AGG | - | chr3_1:61712939-61712958 | None:intergenic | 45.0% | |
| CCTTTGTTCACTAGGGAGAA+GGG | - | chr3_1:61712970-61712989 | None:intergenic | 45.0% | |
| CCTTCTCCCTAGTGAACAAA+GGG | + | chr3_1:61712968-61712987 | Msa0366780:intron | 45.0% | |
| CTTCTCCCTAGTGAACAAAG+GGG | + | chr3_1:61712969-61712988 | Msa0366780:intron | 45.0% | |
| CTTGATCTTACAACCACAGG+TGG | + | chr3_1:61713053-61713072 | Msa0366780:intron | 45.0% | |
| CCAAGTAAAATGACCACCTG+TGG | - | chr3_1:61713069-61713088 | None:intergenic | 45.0% | |
| !! | CCACAGGTGGTCATTTTACT+TGG | + | chr3_1:61713066-61713085 | Msa0366780:intron | 45.0% |
| !! | GTGGTCATTTTACTTGGCAC+CGG | + | chr3_1:61713072-61713091 | Msa0366780:intron | 45.0% |
| ! | ACTTGGCACCGGAACAATAA+TGG | + | chr3_1:61713083-61713102 | Msa0366780:intron | 45.0% |
| !! | GAAGCATCGCTAATGTCGAT+TGG | + | chr3_1:61713135-61713154 | Msa0366780:intron | 45.0% |
| AGGACCTCAACAAAAGCTTC+CGG | - | chr3_1:61713173-61713192 | None:intergenic | 45.0% | |
| GAAGAGGGTTATGATCAGAG+TGG | - | chr3_1:61713205-61713224 | None:intergenic | 45.0% | |
| CAAGCTGCTTCAAAACGGAA+GGG | - | chr3_1:61713269-61713288 | None:intergenic | 45.0% | |
| TTACCACTTCCACATAGTCG+CGG | - | chr3_1:61713301-61713320 | None:intergenic | 45.0% | |
| AGTTTGGGCATGAAAGAAGG+AGG | - | chr3_1:61713612-61713631 | None:intergenic | 45.0% | |
| ! | GTAGGGCTTCATGGTGTTAA+GGG | - | chr3_1:61713864-61713883 | None:intergenic | 45.0% |
| ! | TGTAGGGCTTCATGGTGTTA+AGG | - | chr3_1:61713865-61713884 | None:intergenic | 45.0% |
| CAATGAAAACCATCTGGTCC+AGG | - | chr3_1:61713893-61713912 | None:intergenic | 45.0% | |
| ! | CCAAACAGGTCACTTTGATC+CGG | + | chr3_1:61713979-61713998 | Msa0366780:intron | 45.0% |
| !!! | GTGATGGGCGAATCGATTTT+GGG | - | chr3_1:61714034-61714053 | None:intergenic | 45.0% |
| GGCAGAAAACTGCTTTGGTA+TGG | - | chr3_1:61714160-61714179 | None:intergenic | 45.0% | |
| ! | TACCAAAGCAGTTTTCTGCC+TGG | + | chr3_1:61714160-61714179 | Msa0366780:intron | 45.0% |
| TACCAGGCAGAAAACTGCTT+TGG | - | chr3_1:61714165-61714184 | None:intergenic | 45.0% | |
| ! | AAAGCAGTTTTCTGCCTGGT+AGG | + | chr3_1:61714164-61714183 | Msa0366780:intron | 45.0% |
| ! | AAGCAGTTTTCTGCCTGGTA+GGG | + | chr3_1:61714165-61714184 | Msa0366780:intron | 45.0% |
| !! | TTATCAGAAGTACCCCTACC+AGG | - | chr3_1:61714181-61714200 | None:intergenic | 45.0% |
| GACATAGCCCTTCTTCTTCT+TGG | - | chr3_1:61714245-61714264 | None:intergenic | 45.0% | |
| TTTCCTCAAGTCTTGCCTTC+AGG | + | chr3_1:61714312-61714331 | Msa0366780:intron | 45.0% | |
| AAGTCTTGCCTTCAGGAGTT+TGG | + | chr3_1:61714319-61714338 | Msa0366780:intron | 45.0% | |
| CCTTCAGGAGTTTGGATTTC+CGG | + | chr3_1:61714327-61714346 | Msa0366780:intron | 45.0% | |
| ACCATGTGTGGGTTTGAAAG+GGG | - | chr3_1:61714428-61714447 | None:intergenic | 45.0% | |
| GACCATGTGTGGGTTTGAAA+GGG | - | chr3_1:61714429-61714448 | None:intergenic | 45.0% | |
| AGACCATGTGTGGGTTTGAA+AGG | - | chr3_1:61714430-61714449 | None:intergenic | 45.0% | |
| CCGATTCAAATCACTAACGG+AGG | + | chr3_1:61714547-61714566 | Msa0366780:intron | 45.0% | |
| TTCCAAGAGACGTTGTGCTA+CGG | - | chr3_1:61714777-61714796 | None:intergenic | 45.0% | |
| ! | TTGGCGGGGTTCTAATAACA+AGG | + | chr3_1:61715029-61715048 | Msa0366780:intron | 45.0% |
| ! | TGGCGGGGTTCTAATAACAA+GGG | + | chr3_1:61715030-61715049 | Msa0366780:intron | 45.0% |
| CAGCAATAACTCACCCTCTT+GGG | + | chr3_1:61715251-61715270 | Msa0366780:intron | 45.0% | |
| CGAATGATAGATGCCCAAGA+GGG | - | chr3_1:61715267-61715286 | None:intergenic | 45.0% | |
| ACGAATGATAGATGCCCAAG+AGG | - | chr3_1:61715268-61715287 | None:intergenic | 45.0% | |
| !! | CCCGCTTTTGAGCATATCTT+TGG | - | chr3_1:61715292-61715311 | None:intergenic | 45.0% |
| ! | TGCTCAAAAGCGGGTACTTT+TGG | + | chr3_1:61715298-61715317 | Msa0366780:intron | 45.0% |
| ATTGCCGAACCAAAAGGATG+TGG | - | chr3_1:61715340-61715359 | None:intergenic | 45.0% | |
| !!! | CATCCTTTTGGTTCGGCAAT+TGG | + | chr3_1:61715340-61715359 | Msa0366780:intron | 45.0% |
| AACCGGAACCAAAGATCCAA+GGG | - | chr3_1:61715379-61715398 | None:intergenic | 45.0% | |
| TAACCGGAACCAAAGATCCA+AGG | - | chr3_1:61715380-61715399 | None:intergenic | 45.0% | |
| TTGGGACCATAACAAGAACG+GGG | + | chr3_1:61715554-61715573 | Msa0366780:intron | 45.0% | |
| TGTAGACCCCGTTCTTGTTA+TGG | - | chr3_1:61715563-61715582 | None:intergenic | 45.0% | |
| GGGGTCTACACAACTAAAAG+TGG | + | chr3_1:61715573-61715592 | Msa0366780:intron | 45.0% | |
| !! | GTCAATTGCTGTTTCAGAGG+AGG | - | chr3_1:61715616-61715635 | None:intergenic | 45.0% |
| !! | GCTGTCAATTGCTGTTTCAG+AGG | - | chr3_1:61715619-61715638 | None:intergenic | 45.0% |
| ACCCAACTCCAAGAATGATG+CGG | - | chr3_1:61715645-61715664 | None:intergenic | 45.0% | |
| GAGTTGGGTTTGCAAATTGC+AGG | + | chr3_1:61715656-61715675 | Msa0366780:intron | 45.0% | |
| TCTTTCTTGCTTGTCTCTGG+TGG | + | chr3_1:61715943-61715962 | Msa0366780:intron | 45.0% | |
| TGCTGTTCCAACTAATCCAC+CGG | - | chr3_1:61716100-61716119 | None:intergenic | 45.0% | |
| GGCTTAATCCGCAATAATGC+AGG | + | chr3_1:61716191-61716210 | Msa0366780:intron | 45.0% | |
| !! | AATGCAGGTCTGTTTCTGAC+TGG | + | chr3_1:61716206-61716225 | Msa0366780:intron | 45.0% |
| !! | CTGTTTCTGACTGGTTTCTC+AGG | + | chr3_1:61716215-61716234 | Msa0366780:intron | 45.0% |
| TGCAAGCAGAATCTTGGATC+CGG | - | chr3_1:61716241-61716260 | None:intergenic | 45.0% | |
| !!! | GGATCAATGCGCGGATTTTT+TGG | + | chr3_1:61716475-61716494 | Msa0366780:intron | 45.0% |
| !!! | GCGGATTTTTTGGCAAAGCT+CGG | + | chr3_1:61716485-61716504 | Msa0366780:intron | 45.0% |
| AAGTGTATGAGATCATGGGG+AGG | - | chr3_1:61716548-61716567 | None:intergenic | 45.0% | |
| GCAGCAAGTGTATGAGATCA+TGG | - | chr3_1:61716553-61716572 | None:intergenic | 45.0% | |
| AGTAAGTGGGACCTAGAACA+TGG | - | chr3_1:61716703-61716722 | None:intergenic | 45.0% | |
| CCTTTCATGTGATAGCCACT+TGG | - | chr3_1:61717020-61717039 | None:intergenic | 45.0% | |
| CCAAGTGGCTATCACATGAA+AGG | + | chr3_1:61717017-61717036 | Msa0366780:intron | 45.0% | |
| ACAGCATTCGAAGGAAGCTA+TGG | + | chr3_1:61717166-61717185 | Msa0366780:intron | 45.0% | |
| GAAGGCTTGAAGACTCTAGA+AGG | + | chr3_1:61717234-61717253 | Msa0366780:CDS | 45.0% | |
| ! | AAGACTCTAGAAGGTGAGCT+TGG | + | chr3_1:61717243-61717262 | Msa0366780:CDS | 45.0% |
| AGTGTCCTAAGCTTGTAGCT+TGG | + | chr3_1:61717379-61717398 | Msa0366780:CDS | 45.0% | |
| GTGTCCTAAGCTTGTAGCTT+GGG | + | chr3_1:61717380-61717399 | Msa0366780:CDS | 45.0% | |
| ! | CCATAGATTTTGTGTGGGTG+AGG | - | chr3_1:61717447-61717466 | None:intergenic | 45.0% |
| CCTCACCCACACAAAATCTA+TGG | + | chr3_1:61717444-61717463 | Msa0366780:CDS | 45.0% | |
| ATACATGGGTGAGGACAGTG+TGG | + | chr3_1:61711032-61711051 | Msa0366780:CDS | 50.0% | |
| GAGTGGAGACCCCACAAATA+TGG | - | chr3_1:61711565-61711584 | None:intergenic | 50.0% | |
| !! | CAAGGATTGGTTTGCGTGTG+GGG | - | chr3_1:61712170-61712189 | None:intergenic | 50.0% |
| !! | CCAAGGATTGGTTTGCGTGT+GGG | - | chr3_1:61712171-61712190 | None:intergenic | 50.0% |
| TCGCATTTGTGGTCATGCCA+AGG | - | chr3_1:61712188-61712207 | None:intergenic | 50.0% | |
| !! | AATTGGTTCGGTCATGGGCA+TGG | - | chr3_1:61712286-61712305 | None:intergenic | 50.0% |
| CCTCTCTTGGAACATCAGAG+GGG | + | chr3_1:61712551-61712570 | Msa0366780:intron | 50.0% | |
| GAAACACCAACCGACCTTCA+TGG | + | chr3_1:61712617-61712636 | Msa0366780:intron | 50.0% | |
| TGATAGCCATGAAGGTCGGT+TGG | - | chr3_1:61712626-61712645 | None:intergenic | 50.0% | |
| GAGCTTTGCGAAGGACACAT+GGG | - | chr3_1:61712655-61712674 | None:intergenic | 50.0% | |
| AGAGCTTTGCGAAGGACACA+TGG | - | chr3_1:61712656-61712675 | None:intergenic | 50.0% | |
| ! | GTTAGAGTCAAGGATGGTGG+TGG | - | chr3_1:61712781-61712800 | None:intergenic | 50.0% |
| AGCATAGATGCAGGTGCAAG+CGG | - | chr3_1:61712847-61712866 | None:intergenic | 50.0% | |
| !! | AAAGGTTAGGGCGCTGAGAA+GGG | - | chr3_1:61712878-61712897 | None:intergenic | 50.0% |
| TAGCATCCAAGGGACATCGA+TGG | - | chr3_1:61712928-61712947 | None:intergenic | 50.0% | |
| CCCTTCTCCCTAGTGAACAA+AGG | + | chr3_1:61712967-61712986 | Msa0366780:intron | 50.0% | |
| CCCTTTGTTCACTAGGGAGA+AGG | - | chr3_1:61712971-61712990 | None:intergenic | 50.0% | |
| TACCGCCCCTTTGTTCACTA+GGG | - | chr3_1:61712977-61712996 | None:intergenic | 50.0% | |
| ATACCGCCCCTTTGTTCACT+AGG | - | chr3_1:61712978-61712997 | None:intergenic | 50.0% | |
| ! | CGATTGGCGTGTCTCTTTTC+CGG | + | chr3_1:61713151-61713170 | Msa0366780:intron | 50.0% |
| CCAAGCTGCTTCAAAACGGA+AGG | - | chr3_1:61713270-61713289 | None:intergenic | 50.0% | |
| !!! | CCTTCCGTTTTGAAGCAGCT+TGG | + | chr3_1:61713267-61713286 | Msa0366780:intron | 50.0% |
| GATAGATCACCGCGACTATG+TGG | + | chr3_1:61713289-61713308 | Msa0366780:intron | 50.0% | |
| TGGAAGTGGTAAGAAGCTCC+TGG | + | chr3_1:61713309-61713328 | Msa0366780:intron | 50.0% | |
| !!! | TTTTTCGAGAAGGGTGTGGC+GGG | - | chr3_1:61713492-61713511 | None:intergenic | 50.0% |
| !!! | CTTTTTCGAGAAGGGTGTGG+CGG | - | chr3_1:61713493-61713512 | None:intergenic | 50.0% |
| TCGGAGGTCCATATGCCATT+TGG | - | chr3_1:61713677-61713696 | None:intergenic | 50.0% | |
| ! | TAGGAGGTTGTTGCTGGTTG+GGG | - | chr3_1:61713762-61713781 | None:intergenic | 50.0% |
| ! | GTAGGAGGTTGTTGCTGGTT+GGG | - | chr3_1:61713763-61713782 | None:intergenic | 50.0% |
| TGTAGGAGGTTGTTGCTGGT+TGG | - | chr3_1:61713764-61713783 | None:intergenic | 50.0% | |
| ACCAGCAACAACCTCCTACA+TGG | + | chr3_1:61713764-61713783 | Msa0366780:intron | 50.0% | |
| !! | TAGTTCGTCAATGGTGGGTG+GGG | - | chr3_1:61713792-61713811 | None:intergenic | 50.0% |
| !! | CTAGTTCGTCAATGGTGGGT+GGG | - | chr3_1:61713793-61713812 | None:intergenic | 50.0% |
| ! | TCTAGTTCGTCAATGGTGGG+TGG | - | chr3_1:61713794-61713813 | None:intergenic | 50.0% |
| AGGTGCTTTGTAGGGCTTCA+TGG | - | chr3_1:61713873-61713892 | None:intergenic | 50.0% | |
| ! | ATGAAGCCCTACAAAGCACC+TGG | + | chr3_1:61713872-61713891 | Msa0366780:intron | 50.0% |
| TCTGGTCCAGGTGCTTTGTA+GGG | - | chr3_1:61713881-61713900 | None:intergenic | 50.0% | |
| ATCTGGTCCAGGTGCTTTGT+AGG | - | chr3_1:61713882-61713901 | None:intergenic | 50.0% | |
| ! | TACAAAGCACCTGGACCAGA+TGG | + | chr3_1:61713881-61713900 | Msa0366780:intron | 50.0% |
| GTCCAAACAGCCTTCCAAAC+AGG | + | chr3_1:61713965-61713984 | Msa0366780:intron | 50.0% | |
| GACCTGTTTGGAAGGCTGTT+TGG | - | chr3_1:61713970-61713989 | None:intergenic | 50.0% | |
| CCGGATCAAAGTGACCTGTT+TGG | - | chr3_1:61713982-61714001 | None:intergenic | 50.0% | |
| !!! | GGTGATGGGCGAATCGATTT+TGG | - | chr3_1:61714035-61714054 | None:intergenic | 50.0% |
| ! | AGCAGTTTTCTGCCTGGTAG+GGG | + | chr3_1:61714166-61714185 | Msa0366780:intron | 50.0% |
| ACTCCTGAAGGCAAGACTTG+AGG | - | chr3_1:61714318-61714337 | None:intergenic | 50.0% | |
| CCGGAAATCCAAACTCCTGA+AGG | - | chr3_1:61714330-61714349 | None:intergenic | 50.0% | |
| CCATGTGTGGGTTTGAAAGG+GGG | - | chr3_1:61714427-61714446 | None:intergenic | 50.0% | |
| ! | CCTTGTCTGAGACCATGTGT+GGG | - | chr3_1:61714439-61714458 | None:intergenic | 50.0% |
| ! | ACCTTGTCTGAGACCATGTG+TGG | - | chr3_1:61714440-61714459 | None:intergenic | 50.0% |
| ATCAATCATGCCGTGCACCA+TGG | + | chr3_1:61714514-61714533 | Msa0366780:intron | 50.0% | |
| TTACTCTTCAGGGATACCCC+AGG | + | chr3_1:61714717-61714736 | Msa0366780:intron | 50.0% | |
| ATCCGTAGCACAACGTCTCT+TGG | + | chr3_1:61714772-61714791 | Msa0366780:intron | 50.0% | |
| !! | TGAAGTCGCTTCTTTTCGGG+CGG | - | chr3_1:61714828-61714847 | None:intergenic | 50.0% |
| ! | TGCAAACAAGGTTGGCTGCT+TGG | + | chr3_1:61714866-61714885 | Msa0366780:intron | 50.0% |
| CCAAGAGGGTGAGTTATTGC+TGG | - | chr3_1:61715253-61715272 | None:intergenic | 50.0% | |
| CCAGCAATAACTCACCCTCT+TGG | + | chr3_1:61715250-61715269 | Msa0366780:intron | 50.0% | |
| !! | AAGCGGGTACTTTTGGAGAC+CGG | + | chr3_1:61715305-61715324 | Msa0366780:intron | 50.0% |
| !! | GGCTCCACATCCTTTTGGTT+CGG | + | chr3_1:61715333-61715352 | Msa0366780:intron | 50.0% |
| GCTCCAATTGCCGAACCAAA+AGG | - | chr3_1:61715346-61715365 | None:intergenic | 50.0% | |
| ! | TCCCCTTGGATCTTTGGTTC+CGG | + | chr3_1:61715374-61715393 | Msa0366780:intron | 50.0% |
| ACCGGAACCAAAGATCCAAG+GGG | - | chr3_1:61715378-61715397 | None:intergenic | 50.0% | |
| TTGAGTGTGAGGGCTATCAG+AGG | - | chr3_1:61715445-61715464 | None:intergenic | 50.0% | |
| CCAACTCCAAGAATGATGCG+GGG | - | chr3_1:61715643-61715662 | None:intergenic | 50.0% | |
| CCCAACTCCAAGAATGATGC+GGG | - | chr3_1:61715644-61715663 | None:intergenic | 50.0% | |
| CCCGCATCATTCTTGGAGTT+GGG | + | chr3_1:61715641-61715660 | Msa0366780:intron | 50.0% | |
| CATGAACAGCCAGCCAAATG+AGG | - | chr3_1:61715701-61715720 | None:intergenic | 50.0% | |
| ATCACCGCATCTGCTAGTTG+TGG | + | chr3_1:61715759-61715778 | Msa0366780:intron | 50.0% | |
| CCTTCCACAACTAGCAGATG+CGG | - | chr3_1:61715766-61715785 | None:intergenic | 50.0% | |
| TCTGCTAGTTGTGGAAGGTG+CGG | + | chr3_1:61715768-61715787 | Msa0366780:intron | 50.0% | |
| GCAAGAAAGATGTGAGCACG+AGG | - | chr3_1:61715933-61715952 | None:intergenic | 50.0% | |
| CATATTATTGCGATGCCGCC+AGG | - | chr3_1:61715970-61715989 | None:intergenic | 50.0% | |
| GAGCGGTTTGAAAGGCTTGA+CGG | - | chr3_1:61716061-61716080 | None:intergenic | 50.0% | |
| AGCTGTTGGAGCGGTTTGAA+AGG | - | chr3_1:61716069-61716088 | None:intergenic | 50.0% | |
| TGCCACATTCTCAACGTCGA+TGG | + | chr3_1:61716131-61716150 | Msa0366780:intron | 50.0% | |
| TGCCATCGACGTTGAGAATG+TGG | - | chr3_1:61716136-61716155 | None:intergenic | 50.0% | |
| ACGCCTCTTCAAGCAGGTTA+TGG | + | chr3_1:61716167-61716186 | Msa0366780:intron | 50.0% | |
| CCTCCATAACCTGCTTGAAG+AGG | - | chr3_1:61716173-61716192 | None:intergenic | 50.0% | |
| CCTCTTCAAGCAGGTTATGG+AGG | + | chr3_1:61716170-61716189 | Msa0366780:intron | 50.0% | |
| !! | TTCTGACTGGTTTCTCAGGC+CGG | + | chr3_1:61716219-61716238 | Msa0366780:intron | 50.0% |
| GCAGCAGACATGGGAATTGA+TGG | + | chr3_1:61716305-61716324 | Msa0366780:intron | 50.0% | |
| GAATTAGCACCGCATAGACG+TGG | - | chr3_1:61716394-61716413 | None:intergenic | 50.0% | |
| TAGAGAAGGGGATCAATGCG+CGG | + | chr3_1:61716466-61716485 | Msa0366780:intron | 50.0% | |
| TTGCTGCAGACTGATGCCAT+GGG | + | chr3_1:61716566-61716585 | Msa0366780:intron | 50.0% | |
| TCTCAAGAAAGCCGTTCCCA+TGG | - | chr3_1:61716585-61716604 | None:intergenic | 50.0% | |
| ATCCATACTTCACGCCCAAG+TGG | + | chr3_1:61717002-61717021 | Msa0366780:intron | 50.0% | |
| TTGGCCCAAGCTACAAGCTT+AGG | - | chr3_1:61717387-61717406 | None:intergenic | 50.0% | |
| AGCTTGTAGCTTGGGCCAAA+AGG | + | chr3_1:61717388-61717407 | Msa0366780:CDS | 50.0% | |
| ! | AGCTTGGGCCAAAAGGTGTA+TGG | + | chr3_1:61717395-61717414 | Msa0366780:CDS | 50.0% |
| AGGGTCACAGGGCAAAAGAG+AGG | - | chr3_1:61711282-61711301 | None:intergenic | 55.0% | |
| CCCACACGCAAACCAATCCT+TGG | + | chr3_1:61712168-61712187 | Msa0366780:intron | 55.0% | |
| !! | GCCAAGGATTGGTTTGCGTG+TGG | - | chr3_1:61712172-61712191 | None:intergenic | 55.0% |
| CCCCTCTGATGTTCCAAGAG+AGG | - | chr3_1:61712554-61712573 | None:intergenic | 55.0% | |
| ATTGAAGCCAACGGCCACTC+CGG | + | chr3_1:61712717-61712736 | Msa0366780:intron | 55.0% | |
| ! | GGTGGTGGTGATGTTGCTAG+CGG | - | chr3_1:61712766-61712785 | None:intergenic | 55.0% |
| ! | GTTGGGGCTAGCATAGATGC+AGG | - | chr3_1:61712856-61712875 | None:intergenic | 55.0% |
| !! | TTAGGGCGCTGAGAAGGGTT+GGG | - | chr3_1:61712873-61712892 | None:intergenic | 55.0% |
| !! | CAAAGGTTAGGGCGCTGAGA+AGG | - | chr3_1:61712879-61712898 | None:intergenic | 55.0% |
| CTTCTCAGCGCCCTAACCTT+TGG | + | chr3_1:61712877-61712896 | Msa0366780:intron | 55.0% | |
| GACAAGCCATCGATGTCCCT+TGG | + | chr3_1:61712919-61712938 | Msa0366780:intron | 55.0% | |
| CTCCCTAGTGAACAAAGGGG+CGG | + | chr3_1:61712972-61712991 | Msa0366780:intron | 55.0% | |
| GATCAGAGTGGTGTCTGCAG+AGG | - | chr3_1:61713193-61713212 | None:intergenic | 55.0% | |
| AACCCTCTTCTCCTCCGCTT+TGG | + | chr3_1:61713215-61713234 | Msa0366780:intron | 55.0% | |
| CACCAAAGCGGAGGAGAAGA+GGG | - | chr3_1:61713220-61713239 | None:intergenic | 55.0% | |
| CTAATGGGAGGCCACCAAAG+CGG | - | chr3_1:61713232-61713251 | None:intergenic | 55.0% | |
| GTGGCCTCCCATTAGCAAGA+GGG | + | chr3_1:61713237-61713256 | Msa0366780:intron | 55.0% | |
| GCTTCAAAACGGAAGGGCCT+GGG | - | chr3_1:61713263-61713282 | None:intergenic | 55.0% | |
| TGCTTCAAAACGGAAGGGCC+TGG | - | chr3_1:61713264-61713283 | None:intergenic | 55.0% | |
| TCACCGCGACTATGTGGAAG+TGG | + | chr3_1:61713295-61713314 | Msa0366780:intron | 55.0% | |
| ! | TGCTGGTTGGGGGATGTTGT+TGG | - | chr3_1:61713751-61713770 | None:intergenic | 55.0% |
| ! | AGGAGGTTGTTGCTGGTTGG+GGG | - | chr3_1:61713761-61713780 | None:intergenic | 55.0% |
| GCCATGTAGGAGGTTGTTGC+TGG | - | chr3_1:61713768-61713787 | None:intergenic | 55.0% | |
| CCCCCTTTCAAACCCACACA+TGG | + | chr3_1:61714424-61714443 | Msa0366780:intron | 55.0% | |
| CCCACACATGGTCTCAGACA+AGG | + | chr3_1:61714436-61714455 | Msa0366780:intron | 55.0% | |
| TTCCCAGCTTCCATGGTGCA+CGG | - | chr3_1:61714527-61714546 | None:intergenic | 55.0% | |
| ! | GAATCGGTTCCCAGCTTCCA+TGG | - | chr3_1:61714534-61714553 | None:intergenic | 55.0% |
| AAATCACTAACGGAGGGCCG+AGG | + | chr3_1:61714554-61714573 | Msa0366780:intron | 55.0% | |
| ! | GACAGATTCAGCAGGGCATC+AGG | + | chr3_1:61714661-61714680 | Msa0366780:intron | 55.0% |
| !! | AGCGGGTACTTTTGGAGACC+GGG | + | chr3_1:61715306-61715325 | Msa0366780:intron | 55.0% |
| !! | TACTTTTGGAGACCGGGCTC+AGG | + | chr3_1:61715312-61715331 | Msa0366780:intron | 55.0% |
| ! | GCTCAGGCTCCACATCCTTT+TGG | + | chr3_1:61715328-61715347 | Msa0366780:intron | 55.0% |
| TTCGGCAATTGGAGCCACCA+TGG | + | chr3_1:61715351-61715370 | Msa0366780:intron | 55.0% | |
| AAGATCCAAGGGGACCATGG+TGG | - | chr3_1:61715368-61715387 | None:intergenic | 55.0% | |
| CCAAAGATCCAAGGGGACCA+TGG | - | chr3_1:61715371-61715390 | None:intergenic | 55.0% | |
| CCATGGTCCCCTTGGATCTT+TGG | + | chr3_1:61715368-61715387 | Msa0366780:intron | 55.0% | |
| ! | ATCAGCTGCTGCTTGGGGAA+GGG | - | chr3_1:61715481-61715500 | None:intergenic | 55.0% |
| ! | TATCAGCTGCTGCTTGGGGA+AGG | - | chr3_1:61715482-61715501 | None:intergenic | 55.0% |
| TCCCCAAGCAGCAGCTGATA+CGG | + | chr3_1:61715482-61715501 | Msa0366780:intron | 55.0% | |
| ! | ACCGTATCAGCTGCTGCTTG+GGG | - | chr3_1:61715486-61715505 | None:intergenic | 55.0% |
| ! | CACCGTATCAGCTGCTGCTT+GGG | - | chr3_1:61715487-61715506 | None:intergenic | 55.0% |
| TCACCGTATCAGCTGCTGCT+TGG | - | chr3_1:61715488-61715507 | None:intergenic | 55.0% | |
| ACAGCACCCCGCATCATTCT+TGG | + | chr3_1:61715634-61715653 | Msa0366780:intron | 55.0% | |
| CCCCGCATCATTCTTGGAGT+TGG | + | chr3_1:61715640-61715659 | Msa0366780:intron | 55.0% | |
| GGTGCAGCAAGGAGAGAGTA+GGG | - | chr3_1:61715731-61715750 | None:intergenic | 55.0% | |
| TGGTGCAGCAAGGAGAGAGT+AGG | - | chr3_1:61715732-61715751 | None:intergenic | 55.0% | |
| GATGTGTCTGTGGTGCAGCA+AGG | - | chr3_1:61715742-61715761 | None:intergenic | 55.0% | |
| CAGATGCGGTGATGTGTCTG+TGG | - | chr3_1:61715752-61715771 | None:intergenic | 55.0% | |
| CCGCATCTGCTAGTTGTGGA+AGG | + | chr3_1:61715763-61715782 | Msa0366780:intron | 55.0% | |
| GATGTGAGCACGAGGTCCTT+TGG | - | chr3_1:61715925-61715944 | None:intergenic | 55.0% | |
| TTGCTTGTCTCTGGTGGTCC+TGG | + | chr3_1:61715949-61715968 | Msa0366780:intron | 55.0% | |
| ! | AACCGCTCCAACAGCTTGCT+CGG | + | chr3_1:61716073-61716092 | Msa0366780:intron | 55.0% |
| ! | CTGCTTGAAGAGGCGTACCA+AGG | - | chr3_1:61716163-61716182 | None:intergenic | 55.0% |
| CTTGGTACGCCTCTTCAAGC+AGG | + | chr3_1:61716161-61716180 | Msa0366780:intron | 55.0% | |
| CTTGCTGCAGACTGATGCCA+TGG | + | chr3_1:61716565-61716584 | Msa0366780:intron | 55.0% | |
| GCAGACTGATGCCATGGGAA+CGG | + | chr3_1:61716571-61716590 | Msa0366780:intron | 55.0% | |
| AGCCACTTGGGCGTGAAGTA+TGG | - | chr3_1:61717007-61717026 | None:intergenic | 55.0% | |
| TACTTTGACCCGTCCCCCTC+TGG | + | chr3_1:61712144-61712163 | Msa0366780:intron | 60.0% | |
| TATTCCTCCGGAGTGGCCGT+TGG | - | chr3_1:61712727-61712746 | None:intergenic | 60.0% | |
| ACGGCCACTCCGGAGGAATA+TGG | + | chr3_1:61712727-61712746 | Msa0366780:intron | 60.0% | |
| GGAGCCATATTCCTCCGGAG+TGG | - | chr3_1:61712734-61712753 | None:intergenic | 60.0% | |
| GATGCAGGTGCAAGCGGAGT+TGG | - | chr3_1:61712841-61712860 | None:intergenic | 60.0% | |
| !! | TAGGGCGCTGAGAAGGGTTG+GGG | - | chr3_1:61712872-61712891 | None:intergenic | 60.0% |
| !! | GTTAGGGCGCTGAGAAGGGT+TGG | - | chr3_1:61712874-61712893 | None:intergenic | 60.0% |
| CCACCAAAGCGGAGGAGAAG+AGG | - | chr3_1:61713221-61713240 | None:intergenic | 60.0% | |
| CCTCTTCTCCTCCGCTTTGG+TGG | + | chr3_1:61713218-61713237 | Msa0366780:intron | 60.0% | |
| GGTGGCCTCCCATTAGCAAG+AGG | + | chr3_1:61713236-61713255 | Msa0366780:intron | 60.0% | |
| TGGGCCCTCTTGCTAATGGG+AGG | - | chr3_1:61713244-61713263 | None:intergenic | 60.0% | |
| TCCCATTAGCAAGAGGGCCC+AGG | + | chr3_1:61713243-61713262 | Msa0366780:intron | 60.0% | |
| GCCTGGGCCCTCTTGCTAAT+GGG | - | chr3_1:61713247-61713266 | None:intergenic | 60.0% | |
| TGTCACGACGGCCCTTTCAG+AGG | + | chr3_1:61713349-61713368 | Msa0366780:intron | 60.0% | |
| ATGCCGTGCACCATGGAAGC+TGG | + | chr3_1:61714521-61714540 | Msa0366780:intron | 60.0% | |
| TGCCGTGCACCATGGAAGCT+GGG | + | chr3_1:61714522-61714541 | Msa0366780:intron | 60.0% | |
| CATGGAGCATGGGGAAACCG+AGG | - | chr3_1:61714804-61714823 | None:intergenic | 60.0% | |
| CTCGGTTTCCCCATGCTCCA+TGG | + | chr3_1:61714802-61714821 | Msa0366780:intron | 60.0% | |
| AAGGATGTGGAGCCTGAGCC+CGG | - | chr3_1:61715327-61715346 | None:intergenic | 60.0% | |
| CTTGTCTCTGGTGGTCCTGG+CGG | + | chr3_1:61715952-61715971 | Msa0366780:intron | 60.0% | |
| GTCCGAGCAAGCTGTTGGAG+CGG | - | chr3_1:61716078-61716097 | None:intergenic | 60.0% | |
| ! | CTCCAACAGCTTGCTCGGAC+CGG | + | chr3_1:61716078-61716097 | Msa0366780:intron | 60.0% |
| !! | GCTCGGACCGGTGGATTAGT+TGG | + | chr3_1:61716090-61716109 | Msa0366780:intron | 60.0% |
| AACGTCGATGGCAGCTGCCT+TGG | + | chr3_1:61716143-61716162 | Msa0366780:intron | 60.0% | |
| TTTGCGTGTGGGGCCAGAGG+GGG | - | chr3_1:61712160-61712179 | None:intergenic | 65.0% | |
| GTTTGCGTGTGGGGCCAGAG+GGG | - | chr3_1:61712161-61712180 | None:intergenic | 65.0% | |
| GGTTTGCGTGTGGGGCCAGA+GGG | - | chr3_1:61712162-61712181 | None:intergenic | 65.0% | |
| ! | TGGTTTGCGTGTGGGGCCAG+AGG | - | chr3_1:61712163-61712182 | None:intergenic | 65.0% |
| ATGGGAGGCCACCAAAGCGG+AGG | - | chr3_1:61713229-61713248 | None:intergenic | 65.0% | |
| GGCCTGGGCCCTCTTGCTAA+TGG | - | chr3_1:61713248-61713267 | None:intergenic | 65.0% | |
| TTCGGGCGGCCATGGAGCAT+GGG | - | chr3_1:61714814-61714833 | None:intergenic | 65.0% | |
| TTTCGGGCGGCCATGGAGCA+TGG | - | chr3_1:61714815-61714834 | None:intergenic | 65.0% | |
| !! | CGCTTCTTTTCGGGCGGCCA+TGG | - | chr3_1:61714822-61714841 | None:intergenic | 65.0% |
| TGGAGCCACCATGGTCCCCT+TGG | + | chr3_1:61715360-61715379 | Msa0366780:intron | 65.0% | |
| CACCGGTCCGAGCAAGCTGT+TGG | - | chr3_1:61716083-61716102 | None:intergenic | 65.0% | |
| ! | CAACAGCTTGCTCGGACCGG+TGG | + | chr3_1:61716081-61716100 | Msa0366780:intron | 65.0% |
| GAAGCCAACGGCCACTCCGG+AGG | + | chr3_1:61712720-61712739 | Msa0366780:intron | 70.0% | |
| ! | TGGGTGGGGCGCCATGTAGG+AGG | - | chr3_1:61713778-61713797 | None:intergenic | 70.0% |
| ! | TGGTGGGTGGGGCGCCATGT+AGG | - | chr3_1:61713781-61713800 | None:intergenic | 70.0% |
| TCGGGCGGCCATGGAGCATG+GGG | - | chr3_1:61714813-61714832 | None:intergenic | 70.0% | |
| GTGTGGGGCCAGAGGGGGAC+GGG | - | chr3_1:61712155-61712174 | None:intergenic | 75.0% | |
| CGTGTGGGGCCAGAGGGGGA+CGG | - | chr3_1:61712156-61712175 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 61710902 | 61717506 | 61710902 | ID=Msa0366780;Name=Msa0366780 |
| chr3_1 | mRNA | 61710902 | 61717506 | 61710902 | ID=Msa0366780-mRNA-1;Parent=Msa0366780;Name=Msa0366780-mRNA-1;_AED=0.20;_eAED=0.20;_QI=122|0|0.5|1|1|1|2|0|220 |
| chr3_1 | exon | 61710902 | 61711349 | 61710902 | ID=Msa0366780-mRNA-1:exon:12000;Parent=Msa0366780-mRNA-1 |
| chr3_1 | exon | 61717170 | 61717506 | 61717170 | ID=Msa0366780-mRNA-1:exon:12001;Parent=Msa0366780-mRNA-1 |
| chr3_1 | five_prime_UTR | 61710902 | 61711023 | 61710902 | ID=Msa0366780-mRNA-1:five_prime_utr;Parent=Msa0366780-mRNA-1 |
| chr3_1 | CDS | 61711024 | 61711349 | 61711024 | ID=Msa0366780-mRNA-1:cds;Parent=Msa0366780-mRNA-1 |
| chr3_1 | CDS | 61717170 | 61717506 | 61717170 | ID=Msa0366780-mRNA-1:cds;Parent=Msa0366780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
