Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0488020 | XP_003598073.1 | 97.906 | 382 | 8 | 0 | 1 | 382 | 1 | 382 | 0.0 | 775 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0488020 | sp|A1RYE4|GYAR_THEPD | 34.211 | 266 | 150 | 5 | 106 | 363 | 58 | 306 | 1.58e-38 | 144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0488020 | G7J081 | 97.906 | 382 | 8 | 0 | 1 | 382 | 1 | 382 | 0.0 | 775 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0488020 | 0.803405 | 3.541462e-49 | -8.615850e-47 |
| Msa0002540 | Msa0488020 | 0.801968 | 7.009360e-49 | -8.615850e-47 |
| Msa0004980 | Msa0488020 | 0.812106 | 5.009716e-51 | -8.615850e-47 |
| Msa0016670 | Msa0488020 | 0.801940 | 7.103560e-49 | -8.615850e-47 |
| Msa0032260 | Msa0488020 | 0.812555 | 3.996087e-51 | -8.615850e-47 |
| Msa0193120 | Msa0488020 | 0.800279 | 1.552583e-48 | -8.615850e-47 |
| Msa0236270 | Msa0488020 | 0.837312 | 5.598212e-57 | -8.615850e-47 |
| Msa0369050 | Msa0488020 | 0.802351 | 5.846717e-49 | -8.615850e-47 |
| Msa0376040 | Msa0488020 | 0.814637 | 1.392141e-51 | -8.615850e-47 |
| Msa0376690 | Msa0488020 | 0.805387 | 1.367848e-49 | -8.615850e-47 |
| Msa0441130 | Msa0488020 | 0.932062 | 1.494061e-94 | -8.615850e-47 |
| Msa0471590 | Msa0488020 | 0.800950 | 1.132908e-48 | -8.615850e-47 |
| Msa0241780 | Msa0488020 | 0.836007 | 1.203910e-56 | -8.615850e-47 |
| Msa0262310 | Msa0488020 | 0.800533 | 1.378171e-48 | -8.615850e-47 |
| Msa0322890 | Msa0488020 | 0.825864 | 3.715431e-54 | -8.615850e-47 |
| Msa0332920 | Msa0488020 | 0.817905 | 2.586764e-52 | -8.615850e-47 |
| Msa0337650 | Msa0488020 | 0.808082 | 3.688330e-50 | -8.615850e-47 |
| Msa0488020 | Msa0508590 | 0.831131 | 1.986432e-55 | -8.615850e-47 |
| Msa0488020 | Msa0508630 | 0.842001 | 3.374982e-58 | -8.615850e-47 |
| Msa0488020 | Msa0516040 | 0.812267 | 4.621092e-51 | -8.615850e-47 |
| Msa0488020 | Msa0541360 | 0.803303 | 3.717731e-49 | -8.615850e-47 |
| Msa0488020 | Msa0622960 | 0.829826 | 4.140950e-55 | -8.615850e-47 |
| Msa0488020 | Msa0675410 | 0.800492 | 1.404973e-48 | -8.615850e-47 |
| Msa0488020 | Msa0687630 | 0.811748 | 5.995522e-51 | -8.615850e-47 |
| Msa0488020 | Msa0688960 | 0.810818 | 9.540221e-51 | -8.615850e-47 |
| Msa0488020 | Msa0718740 | 0.807528 | 4.838227e-50 | -8.615850e-47 |
| Msa0488020 | Msa0747700 | 0.800725 | 1.259560e-48 | -8.615850e-47 |
| Msa0488020 | Msa0758270 | -0.841578 | 4.364976e-58 | -8.615850e-47 |
| Msa0488020 | Msa1019240 | 0.807317 | 5.362360e-50 | -8.615850e-47 |
| Msa0488020 | Msa1019260 | 0.804716 | 1.889991e-49 | -8.615850e-47 |
| Msa0488020 | Msa1082700 | 0.816670 | 4.907160e-52 | -8.615850e-47 |
| Msa0488020 | Msa1104210 | 0.816888 | 4.384868e-52 | -8.615850e-47 |
| Msa0488020 | Msa1134110 | 0.815910 | 7.255622e-52 | -8.615850e-47 |
| Msa0488020 | Msa1165870 | 0.818373 | 2.028198e-52 | -8.615850e-47 |
| Msa0488020 | Msa1166860 | 0.807126 | 5.885354e-50 | -8.615850e-47 |
| Msa0488020 | Msa1304820 | 0.807688 | 4.472166e-50 | -8.615850e-47 |
| Msa0488020 | Msa1307950 | 0.801693 | 7.980975e-49 | -8.615850e-47 |
| Msa0488020 | Msa1335940 | 0.823903 | 1.078051e-53 | -8.615850e-47 |
| Msa0488020 | Msa1404190 | 0.832786 | 7.750334e-56 | -8.615850e-47 |
| Msa0488020 | Msa1442850 | 0.804204 | 2.416943e-49 | -8.615850e-47 |
| Msa0488020 | Msa1445100 | 0.800534 | 1.378051e-48 | -8.615850e-47 |
| Msa0488020 | Msa1460470 | 0.800602 | 1.334594e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0488020 | MtrunA17_Chr3g0077771 | 97.906 | 382 | 8 | 0 | 1 | 382 | 1 | 382 | 0.0 | 775 |
| Msa0488020 | MtrunA17_Chr4g0000511 | 31.496 | 254 | 154 | 5 | 117 | 367 | 151 | 387 | 9.39e-30 | 120 |
| Msa0488020 | MtrunA17_Chr1g0208141 | 30.435 | 253 | 158 | 3 | 117 | 367 | 118 | 354 | 1.20e-29 | 120 |
| Msa0488020 | MtrunA17_Chr8g0351141 | 26.286 | 350 | 210 | 11 | 45 | 375 | 1 | 321 | 1.08e-27 | 111 |
| Msa0488020 | MtrunA17_Chr8g0351121 | 25.706 | 354 | 215 | 10 | 28 | 362 | 17 | 341 | 2.66e-27 | 110 |
| Msa0488020 | MtrunA17_Chr8g0351111 | 27.174 | 276 | 174 | 6 | 106 | 375 | 64 | 318 | 7.61e-26 | 106 |
| Msa0488020 | MtrunA17_Chr4g0004681 | 26.493 | 268 | 177 | 3 | 108 | 375 | 58 | 305 | 4.89e-25 | 103 |
| Msa0488020 | MtrunA17_Chr4g0004711 | 28.517 | 263 | 155 | 6 | 108 | 362 | 58 | 295 | 4.16e-24 | 101 |
| Msa0488020 | MtrunA17_Chr4g0004721 | 27.519 | 258 | 164 | 5 | 108 | 362 | 59 | 296 | 5.52e-24 | 100 |
| Msa0488020 | MtrunA17_Chr6g0450811 | 31.086 | 267 | 150 | 9 | 112 | 366 | 116 | 360 | 9.98e-22 | 95.5 |
| Msa0488020 | MtrunA17_Chr2g0331641 | 26.217 | 267 | 174 | 4 | 99 | 362 | 50 | 296 | 1.38e-20 | 91.3 |
| Msa0488020 | MtrunA17_Chr6g0450821 | 28.716 | 296 | 155 | 12 | 86 | 366 | 57 | 311 | 7.88e-17 | 80.9 |
| Msa0488020 | MtrunA17_Chr7g0246361 | 26.740 | 273 | 152 | 9 | 118 | 380 | 57 | 291 | 2.45e-16 | 79.0 |
| Msa0488020 | MtrunA17_Chr4g0004741 | 28.044 | 271 | 172 | 5 | 108 | 375 | 58 | 308 | 3.12e-15 | 75.9 |
| Msa0488020 | MtrunA17_Chr1g0210971 | 26.493 | 268 | 180 | 7 | 119 | 375 | 88 | 349 | 1.50e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0488020 | AT1G72190.1 | 63.158 | 380 | 130 | 3 | 5 | 382 | 2 | 373 | 2.58e-174 | 490 |
| Msa0488020 | AT1G17745.1 | 31.707 | 287 | 174 | 8 | 85 | 366 | 111 | 380 | 3.08e-31 | 125 |
| Msa0488020 | AT4G34200.1 | 31.102 | 254 | 155 | 5 | 117 | 367 | 124 | 360 | 1.51e-29 | 120 |
| Msa0488020 | AT1G17745.2 | 29.299 | 314 | 173 | 9 | 85 | 366 | 111 | 407 | 1.87e-28 | 117 |
| Msa0488020 | AT2G45630.2 | 28.897 | 263 | 162 | 5 | 118 | 375 | 91 | 333 | 7.26e-27 | 109 |
| Msa0488020 | AT3G19480.1 | 30.709 | 254 | 156 | 5 | 117 | 367 | 109 | 345 | 1.91e-26 | 111 |
| Msa0488020 | AT1G12550.1 | 27.376 | 263 | 163 | 7 | 105 | 361 | 62 | 302 | 8.67e-23 | 98.2 |
| Msa0488020 | AT5G14780.3 | 32.773 | 238 | 128 | 8 | 125 | 351 | 101 | 317 | 1.20e-22 | 98.2 |
| Msa0488020 | AT5G14780.2 | 32.773 | 238 | 128 | 8 | 125 | 351 | 113 | 329 | 1.59e-22 | 98.2 |
| Msa0488020 | AT5G14780.1 | 33.473 | 239 | 125 | 9 | 125 | 351 | 127 | 343 | 1.78e-22 | 98.2 |
| Msa0488020 | AT1G79870.1 | 28.364 | 275 | 173 | 8 | 108 | 378 | 58 | 312 | 1.73e-20 | 91.3 |
| Msa0488020 | AT1G79870.2 | 25.735 | 272 | 165 | 7 | 108 | 378 | 58 | 293 | 4.80e-16 | 78.2 |
| Msa0488020 | AT1G68010.1 | 26.966 | 267 | 180 | 6 | 119 | 375 | 88 | 349 | 7.69e-15 | 75.9 |
| Msa0488020 | AT1G68010.3 | 27.027 | 259 | 174 | 6 | 119 | 367 | 88 | 341 | 2.40e-14 | 73.9 |
| Msa0488020 | AT1G68010.2 | 26.866 | 268 | 180 | 7 | 119 | 375 | 88 | 350 | 2.47e-13 | 71.2 |
Find 86 sgRNAs with CRISPR-Local
Find 464 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTATCGGTGATACTTTATT+TGG | 0.071786 | 3_4:+7212005 | Msa0488020:CDS |
| GATAATGTAGATATTCATTT+TGG | 0.088675 | 3_4:+7212990 | Msa0488020:intron |
| CAAACATCATCCGACTTATT+TGG | 0.161650 | 3_4:-7215064 | None:intergenic |
| CTTCATTTCTTCCATGAAAA+AGG | 0.182361 | 3_4:+7213549 | Msa0488020:CDS |
| CAGAGGACCTCATCTCAATT+TGG | 0.240520 | 3_4:-7215131 | None:intergenic |
| AAGTAAGATAGTAATTATTT+TGG | 0.251060 | 3_4:+7207737 | Msa0488020:five_prime_UTR |
| TTTATTTCAGGGTGCCCTTC+TGG | 0.268864 | 3_4:+7214436 | Msa0488020:intron |
| AAATTTCAATATCTGATCAT+TGG | 0.336562 | 3_4:-7214570 | None:intergenic |
| TCCAAGCTTCCTTTGCTGTA+TGG | 0.363828 | 3_4:-7211979 | None:intergenic |
| AAGACCCAACATTAGATATA+TGG | 0.364315 | 3_4:-7211170 | None:intergenic |
| CTATCGGTGATACTTTATTT+GGG | 0.376577 | 3_4:+7212006 | Msa0488020:CDS |
| AATTTCAATATCTGATCATT+GGG | 0.380747 | 3_4:-7214569 | None:intergenic |
| AGAGAAGAGAAGTGAGTGTT+GGG | 0.398307 | 3_4:-7207849 | None:intergenic |
| CTCCTAAGTGTCCGGATTCA+AGG | 0.399021 | 3_4:-7214508 | None:intergenic |
| ATCATGACTCCTCATATTGC+AGG | 0.400259 | 3_4:+7214602 | Msa0488020:CDS |
| TACTACACAAACATGATAGT+TGG | 0.402501 | 3_4:-7210884 | None:intergenic |
| ATTGAGTTAGTCAATTGAAT+TGG | 0.403788 | 3_4:+7214894 | Msa0488020:exon |
| ATCTGATCATTGGGATCAAA+TGG | 0.411289 | 3_4:-7214560 | None:intergenic |
| GCACGACGATTGAAACCATT+TGG | 0.411552 | 3_4:+7213039 | Msa0488020:CDS |
| CTACAACAACTCAAGATTCA+AGG | 0.411680 | 3_4:+7207870 | Msa0488020:CDS |
| ATAAACTTGGCTAAATAAAC+AGG | 0.416326 | 3_4:-7215098 | None:intergenic |
| AGGATCCCCAGTGGTGCTAC+TGG | 0.419307 | 3_4:+7211121 | Msa0488020:CDS |
| TAGAGATGTACCTTGATAGA+TGG | 0.426362 | 3_4:-7209034 | None:intergenic |
| TTCAGTTGCATGTGCTGAAA+TGG | 0.438602 | 3_4:+7211147 | Msa0488020:CDS |
| TAGAGAAGAGAAGTGAGTGT+TGG | 0.439410 | 3_4:-7207850 | None:intergenic |
| CTTATAATGCAGTATGGTGT+TGG | 0.439984 | 3_4:+7210958 | Msa0488020:CDS |
| AACCTTAGCCATGGATCTAT+AGG | 0.450234 | 3_4:-7214639 | None:intergenic |
| TATTGCTACAAAGCGGAGTT+GGG | 0.456275 | 3_4:+7213071 | Msa0488020:CDS |
| ATGAAGCTTATAATGCAGTA+TGG | 0.460758 | 3_4:+7210952 | Msa0488020:CDS |
| CCTTGGGAATTTCTTCCAAC+GGG | 0.461257 | 3_4:-7210855 | None:intergenic |
| TCCATACAGCAAAGGAAGCT+TGG | 0.462894 | 3_4:+7211978 | Msa0488020:CDS |
| ATGATAGTTGGCAATAGCCT+TGG | 0.466311 | 3_4:-7210872 | None:intergenic |
| TCCTAGCCCTCCTAAGTGTC+CGG | 0.468903 | 3_4:-7214516 | None:intergenic |
| AAAATCTGATGGAGAGAAAT+GGG | 0.472016 | 3_4:+7208909 | Msa0488020:CDS |
| CATGCTGGAAATCCTTTGAC+AGG | 0.473055 | 3_4:+7214870 | Msa0488020:CDS |
| TTATTGCTACAAAGCGGAGT+TGG | 0.473922 | 3_4:+7213070 | Msa0488020:CDS |
| AATGGCCATATATCTAATGT+TGG | 0.489549 | 3_4:+7211165 | Msa0488020:CDS |
| TGAATTTCCAGTAGCACCAC+TGG | 0.503475 | 3_4:-7211128 | None:intergenic |
| ATGGCCATATATCTAATGTT+GGG | 0.506294 | 3_4:+7211166 | Msa0488020:CDS |
| TGATAGTTGGCAATAGCCTT+GGG | 0.519273 | 3_4:-7210871 | None:intergenic |
| CTTAAACTTAAACAGTGAAA+CGG | 0.520932 | 3_4:+7213308 | Msa0488020:CDS |
| GCCTTGGGAATTTCTTCCAA+CGG | 0.523993 | 3_4:-7210856 | None:intergenic |
| ACTATAGGTTGTTGGTGATG+TGG | 0.525653 | 3_4:+7214836 | Msa0488020:intron |
| GTGGTTCTTCAACTTCATGC+TGG | 0.529637 | 3_4:+7214855 | Msa0488020:CDS |
| ATCGATGCTGCAACAAAGCA+TGG | 0.530276 | 3_4:+7211085 | Msa0488020:CDS |
| AACCTTGAATCCGGACACTT+AGG | 0.536199 | 3_4:+7214506 | Msa0488020:CDS |
| CAGAAAACCAAATTGAGATG+AGG | 0.536333 | 3_4:+7215124 | Msa0488020:three_prime_UTR |
| GCAGAATCATCCATCTATCA+AGG | 0.542084 | 3_4:+7209024 | Msa0488020:CDS |
| GGCTAGGAACCGATGTTGCA+TGG | 0.544266 | 3_4:+7214531 | Msa0488020:CDS |
| AATACAGAACAATCATTGCC+TGG | 0.545812 | 3_4:-7215012 | None:intergenic |
| ACTAACTCAATTCCTGTCAA+AGG | 0.547459 | 3_4:-7214882 | None:intergenic |
| AGGAACCGATGTTGCATGGA+CGG | 0.557674 | 3_4:+7214535 | Msa0488020:CDS |
| TTATAATGCAGTATGGTGTT+GGG | 0.558492 | 3_4:+7210959 | Msa0488020:CDS |
| ACAGCCTCATAGTCTAAAAG+AGG | 0.560341 | 3_4:-7214476 | None:intergenic |
| CTCCTATAGATCCATGGCTA+AGG | 0.568330 | 3_4:+7214637 | Msa0488020:CDS |
| CTTGAATCCGGACACTTAGG+AGG | 0.570448 | 3_4:+7214509 | Msa0488020:CDS |
| CCAAATAAAGTATCACCGAT+AGG | 0.575385 | 3_4:-7212005 | None:intergenic |
| AATGCAGTATGGTGTTGGGC+TGG | 0.576747 | 3_4:+7210963 | Msa0488020:CDS |
| CAGTATGGTGTTGGGCTGGA+AGG | 0.577929 | 3_4:+7210967 | Msa0488020:CDS |
| GAATTTCCAGTAGCACCACT+GGG | 0.581979 | 3_4:-7211127 | None:intergenic |
| TCCGGACACTTAGGAGGGCT+AGG | 0.583295 | 3_4:+7214515 | Msa0488020:CDS |
| GTAGGTTGATGTTCTCCCGT+TGG | 0.587056 | 3_4:+7210840 | Msa0488020:intron |
| CTTCTGGTTAATGTTGCTAG+AGG | 0.594373 | 3_4:+7214452 | Msa0488020:CDS |
| CTCTAGCAACATTAACCAGA+AGG | 0.595259 | 3_4:-7214451 | None:intergenic |
| TGCAGATTTCCATACAGCAA+AGG | 0.595617 | 3_4:+7211970 | Msa0488020:CDS |
| GAAGATACTATACTTGCTTG+CGG | 0.595687 | 3_4:-7211195 | None:intergenic |
| AGCCACACAAACCTTAGCCA+TGG | 0.596880 | 3_4:-7214648 | None:intergenic |
| TGATGATCTTGTTGATGTGA+AGG | 0.599066 | 3_4:+7213230 | Msa0488020:CDS |
| AGGAAGCTTGGAGAGCCTAT+CGG | 0.606938 | 3_4:+7211990 | Msa0488020:CDS |
| AGCATGGAATCAAAGTTGCT+AGG | 0.608422 | 3_4:+7211101 | Msa0488020:CDS |
| AGAACACTCCTATAGATCCA+TGG | 0.614020 | 3_4:+7214631 | Msa0488020:CDS |
| CCCGTTGGAAGAAATTCCCA+AGG | 0.614180 | 3_4:+7210855 | Msa0488020:CDS |
| GTTGTATATAGATGAGAACA+TGG | 0.621208 | 3_4:-7208992 | None:intergenic |
| TCTGTAACGCCTGCAATATG+AGG | 0.621540 | 3_4:-7214611 | None:intergenic |
| TTCGCGAAAACCAAATAAGT+CGG | 0.624859 | 3_4:+7215054 | Msa0488020:three_prime_UTR |
| GATGATCTTGTTGATGTGAA+GGG | 0.630775 | 3_4:+7213231 | Msa0488020:CDS |
| TGGCTCCGTCCATGCAACAT+CGG | 0.631902 | 3_4:-7214540 | None:intergenic |
| AAAGTGTGTTGTACTTGTTG+AGG | 0.638382 | 3_4:+7207798 | Msa0488020:CDS |
| AGATGAGAACATGGGAACTG+AGG | 0.641093 | 3_4:-7208983 | None:intergenic |
| TTATTTATAAAATTGAGACC+AGG | 0.655792 | 3_4:+7214994 | Msa0488020:three_prime_UTR |
| TTGAATCCGGACACTTAGGA+GGG | 0.659810 | 3_4:+7214510 | Msa0488020:CDS |
| TCTAGCAACATTAACCAGAA+GGG | 0.669159 | 3_4:-7214450 | None:intergenic |
| TAAAAGTTATTGCTACAAAG+CGG | 0.687855 | 3_4:+7213064 | Msa0488020:CDS |
| TTGTATATAGATGAGAACAT+GGG | 0.718125 | 3_4:-7208991 | None:intergenic |
| AAAGTTGCTAGGATCCCCAG+TGG | 0.758524 | 3_4:+7211112 | Msa0488020:CDS |
| AATTTCCAGTAGCACCACTG+GGG | 0.785993 | 3_4:-7211126 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGAAATATAGATTTTATTT+CGG | - | chr3_4:7212184-7212203 | None:intergenic | 10.0% |
| !!! | AAATATATATAGTTTACTTT+TGG | + | chr3_4:7212297-7212316 | Msa0488020:intron | 10.0% |
| !! | ATTTCAGTAAATATAAATAT+GGG | - | chr3_4:7212693-7212712 | None:intergenic | 10.0% |
| !! | TATTTCAGTAAATATAAATA+TGG | - | chr3_4:7212694-7212713 | None:intergenic | 10.0% |
| !! | AATGAAATAAGTAAATTTAA+GGG | - | chr3_4:7213596-7213615 | None:intergenic | 10.0% |
| !! | AAATGAAATAAGTAAATTTA+AGG | - | chr3_4:7213597-7213616 | None:intergenic | 10.0% |
| !!! | ATTTACTTATTTCATTTTTT+AGG | + | chr3_4:7213600-7213619 | Msa0488020:intron | 10.0% |
| !!! | TTTACTTATTTCATTTTTTA+GGG | + | chr3_4:7213601-7213620 | Msa0488020:intron | 10.0% |
| !!! | AAGTAAGATAGTAATTATTT+TGG | + | chr3_4:7207737-7207756 | Msa0488020:five_prime_UTR | 15.0% |
| !!! | TATTGAATTTAGAATTAACT+GGG | - | chr3_4:7208475-7208494 | None:intergenic | 15.0% |
| !!! | ATATTGAATTTAGAATTAAC+TGG | - | chr3_4:7208476-7208495 | None:intergenic | 15.0% |
| !! | ATTCTAAATTCAATATCATT+AGG | + | chr3_4:7208480-7208499 | Msa0488020:intron | 15.0% |
| !! | ATTCTAAATTCAATGTAATT+AGG | + | chr3_4:7208818-7208837 | Msa0488020:intron | 15.0% |
| !! | GAAAATATCAAAATGAAAAA+AGG | - | chr3_4:7209094-7209113 | None:intergenic | 15.0% |
| !! | ATCAAATTTCTGTTATATTT+AGG | - | chr3_4:7209493-7209512 | None:intergenic | 15.0% |
| !! | TATATTGTCAAAATATGAAT+TGG | - | chr3_4:7209635-7209654 | None:intergenic | 15.0% |
| !!! | AATTTGAAATGAAGAAAAAT+AGG | - | chr3_4:7209811-7209830 | None:intergenic | 15.0% |
| !! | ATATTTCGTTATATCTAAAT+TGG | + | chr3_4:7209853-7209872 | Msa0488020:intron | 15.0% |
| !! | ATAGATACCAATTTAAATTA+AGG | - | chr3_4:7210612-7210631 | None:intergenic | 15.0% |
| !! | TTATCTAACCTAAAATTAAT+TGG | - | chr3_4:7210800-7210819 | None:intergenic | 15.0% |
| !! | GAAAAATAATAAATAATCAG+AGG | - | chr3_4:7211050-7211069 | None:intergenic | 15.0% |
| !!! | TATTTATTATTTTTCCTCTT+AGG | + | chr3_4:7211055-7211074 | Msa0488020:intron | 15.0% |
| !! | AATATTTGTCAATAAAAATG+TGG | - | chr3_4:7211285-7211304 | None:intergenic | 15.0% |
| !! | TTATATTTACTGAAATAGAT+CGG | + | chr3_4:7212697-7212716 | Msa0488020:intron | 15.0% |
| !!! | ATAATGTAGATATTCATTTT+GGG | + | chr3_4:7212991-7213010 | Msa0488020:intron | 15.0% |
| !! | AAAACGAATAAATAAATGAT+TGG | - | chr3_4:7213345-7213364 | None:intergenic | 15.0% |
| !! | ATGAAATAAGTAAATTTAAG+GGG | - | chr3_4:7213595-7213614 | None:intergenic | 15.0% |
| !! | AATAGAAATAGAGAAAATAA+TGG | + | chr3_4:7213748-7213767 | Msa0488020:intron | 15.0% |
| !!! | GATTTTATTTTTTTATCAGT+AGG | + | chr3_4:7214206-7214225 | Msa0488020:intron | 15.0% |
| !!! | TACAAGATATTTTGAGATTA+AGG | + | chr3_4:7208111-7208130 | Msa0488020:intron | 20.0% |
| !! | CTAAGCTATAATTTCAATAT+TGG | + | chr3_4:7208874-7208893 | Msa0488020:intron | 20.0% |
| !!! | GTTTTAACTTTTAAATGTCA+TGG | + | chr3_4:7209135-7209154 | Msa0488020:intron | 20.0% |
| !! | TATAAAACAATAGTGATGAA+TGG | + | chr3_4:7209203-7209222 | Msa0488020:intron | 20.0% |
| !! | AACAAGATTAAAAATGCAAA+AGG | - | chr3_4:7209240-7209259 | None:intergenic | 20.0% |
| !!! | TTTTGCATTTTTAATCTTGT+TGG | + | chr3_4:7209239-7209258 | Msa0488020:intron | 20.0% |
| !!! | TTTGCATTTTTAATCTTGTT+GGG | + | chr3_4:7209240-7209259 | Msa0488020:intron | 20.0% |
| !! | AGTTAAAACAAAAGGAATTA+TGG | + | chr3_4:7209435-7209454 | Msa0488020:intron | 20.0% |
| !! | GTTAAAACAAAAGGAATTAT+GGG | + | chr3_4:7209436-7209455 | Msa0488020:intron | 20.0% |
| !!! | CTTCTTATTTCATAATTCTA+CGG | - | chr3_4:7209586-7209605 | None:intergenic | 20.0% |
| !! | TAGATTGAATTAAGTTTCTT+CGG | + | chr3_4:7209713-7209732 | Msa0488020:intron | 20.0% |
| !! | TTCAGAGAAACAATTAAAAT+TGG | + | chr3_4:7210364-7210383 | Msa0488020:intron | 20.0% |
| !! | CCAATTTAAATTAAGGAAAT+AGG | - | chr3_4:7210605-7210624 | None:intergenic | 20.0% |
| !! | CCTATTTCCTTAATTTAAAT+TGG | + | chr3_4:7210602-7210621 | Msa0488020:intron | 20.0% |
| !! | ATTTAAATTGGTATCTATCA+TGG | + | chr3_4:7210614-7210633 | Msa0488020:intron | 20.0% |
| !! | TTTAAATTGGTATCTATCAT+GGG | + | chr3_4:7210615-7210634 | Msa0488020:intron | 20.0% |
| !!! | GTTTCATTCCAATTAATTTT+AGG | + | chr3_4:7210789-7210808 | Msa0488020:intron | 20.0% |
| !!! | AACTACTAGAAACTTTTTAA+AGG | + | chr3_4:7211444-7211463 | Msa0488020:intron | 20.0% |
| !!! | ACTACTAGAAACTTTTTAAA+GGG | + | chr3_4:7211445-7211464 | Msa0488020:intron | 20.0% |
| !!! | TCTATATTTCTACCTTAAAA+AGG | + | chr3_4:7212192-7212211 | Msa0488020:intron | 20.0% |
| !!! | GATAATGTAGATATTCATTT+TGG | + | chr3_4:7212990-7213009 | Msa0488020:intron | 20.0% |
| !!! | TAATGTAGATATTCATTTTG+GGG | + | chr3_4:7212992-7213011 | Msa0488020:intron | 20.0% |
| !!! | TTTTCATTACAATTTGCTTT+TGG | + | chr3_4:7213423-7213442 | Msa0488020:intron | 20.0% |
| !! | TAATCAAAGAATAGTTCATA+GGG | - | chr3_4:7213907-7213926 | None:intergenic | 20.0% |
| !! | ATAATCAAAGAATAGTTCAT+AGG | - | chr3_4:7213908-7213927 | None:intergenic | 20.0% |
| !!! | ATTTTAATTTCGTAGAGAAT+AGG | - | chr3_4:7213987-7214006 | None:intergenic | 20.0% |
| !! | AAATTAAAATTAGTAGCCTA+AGG | + | chr3_4:7213997-7214016 | Msa0488020:intron | 20.0% |
| !! | ACATAGAAATAATGTATAAC+TGG | + | chr3_4:7214156-7214175 | Msa0488020:intron | 20.0% |
| !! | AATAATGTATAACTGGAATT+TGG | + | chr3_4:7214163-7214182 | Msa0488020:intron | 20.0% |
| !!! | CATTTCTTGTTGTTTTATAT+AGG | + | chr3_4:7214314-7214333 | Msa0488020:intron | 20.0% |
| !! | AATTTCAATATCTGATCATT+GGG | - | chr3_4:7214572-7214591 | None:intergenic | 20.0% |
| !! | AAATTTCAATATCTGATCAT+TGG | - | chr3_4:7214573-7214592 | None:intergenic | 20.0% |
| !!! | ATAAACTATCAAAAAAGTAC+AGG | - | chr3_4:7214940-7214959 | None:intergenic | 20.0% |
| !!! | TAGTTTATGATCATTTTCAA+TGG | + | chr3_4:7214952-7214971 | Msa0488020:three_prime_UTR | 20.0% |
| !! | TTATTTATAAAATTGAGACC+AGG | + | chr3_4:7214994-7215013 | Msa0488020:three_prime_UTR | 20.0% |
| !! | TTTTCGTTGAAACAAAGATT+TGG | - | chr3_4:7207828-7207847 | None:intergenic | 25.0% |
| ! | AAAAAATCTAAAAGCCTCAT+CGG | - | chr3_4:7207999-7208018 | None:intergenic | 25.0% |
| !! | TTTTCACAAGTTATTCCAAA+CGG | + | chr3_4:7208658-7208677 | Msa0488020:intron | 25.0% |
| !! | CATTGAATTTAGAATCTAGT+GGG | - | chr3_4:7208813-7208832 | None:intergenic | 25.0% |
| !! | ACATTGAATTTAGAATCTAG+TGG | - | chr3_4:7208814-7208833 | None:intergenic | 25.0% |
| ! | TTGTATATAGATGAGAACAT+GGG | - | chr3_4:7208994-7209013 | None:intergenic | 25.0% |
| ! | TGATTAATGAGCTTCAATTT+AGG | + | chr3_4:7209307-7209326 | Msa0488020:intron | 25.0% |
| !!! | TTCCTTTTGTTTTAACTCTT+CGG | - | chr3_4:7209432-7209451 | None:intergenic | 25.0% |
| ! | GAAATAACCTAAAAACTAAG+AGG | - | chr3_4:7209467-7209486 | None:intergenic | 25.0% |
| ! | ACTTTACTATAAGTCCAAAT+AGG | - | chr3_4:7209550-7209569 | None:intergenic | 25.0% |
| ! | CGTAGAATTATGAAATAAGA+AGG | + | chr3_4:7209584-7209603 | Msa0488020:intron | 25.0% |
| !! | TAAATTGGTGTTCTATCATT+TGG | + | chr3_4:7209868-7209887 | Msa0488020:intron | 25.0% |
| !! | AAATTGGTGTTCTATCATTT+GGG | + | chr3_4:7209869-7209888 | Msa0488020:intron | 25.0% |
| ! | TTCTGTAAGAAACTATGTTA+AGG | + | chr3_4:7209938-7209957 | Msa0488020:intron | 25.0% |
| ! | TCTGTAAGAAACTATGTTAA+GGG | + | chr3_4:7209939-7209958 | Msa0488020:intron | 25.0% |
| ! | TAATGTACAATTAAACTGCT+TGG | + | chr3_4:7210116-7210135 | Msa0488020:intron | 25.0% |
| !! | ACAATTAAAATTGGTGATCT+TGG | + | chr3_4:7210373-7210392 | Msa0488020:intron | 25.0% |
| !! | CAATTAAAATTGGTGATCTT+GGG | + | chr3_4:7210374-7210393 | Msa0488020:intron | 25.0% |
| ! | TTTCAGTAGTAGTTATCTTT+AGG | + | chr3_4:7210501-7210520 | Msa0488020:intron | 25.0% |
| ! | TTAAATTGGTATCTATCATG+GGG | + | chr3_4:7210616-7210635 | Msa0488020:intron | 25.0% |
| ! | AGTAGCAAGTACATATAAAA+TGG | - | chr3_4:7210660-7210679 | None:intergenic | 25.0% |
| ! | GCAATCTCATTTAGAAATAA+TGG | - | chr3_4:7211241-7211260 | None:intergenic | 25.0% |
| ! | TTGACAAATATTTGAAAGCA+AGG | + | chr3_4:7211293-7211312 | Msa0488020:intron | 25.0% |
| ! | TGACAAATATTTGAAAGCAA+GGG | + | chr3_4:7211294-7211313 | Msa0488020:intron | 25.0% |
| !!! | CTACTAGAAACTTTTTAAAG+GGG | + | chr3_4:7211446-7211465 | Msa0488020:intron | 25.0% |
| ! | TGTTATTGTTTAATATGCCA+TGG | + | chr3_4:7212082-7212101 | Msa0488020:intron | 25.0% |
| ! | GTTATTGTTTAATATGCCAT+GGG | + | chr3_4:7212083-7212102 | Msa0488020:intron | 25.0% |
| !! | GTTGCATACATTGATTAAAA+TGG | + | chr3_4:7212142-7212161 | Msa0488020:intron | 25.0% |
| !!! | ATCCAGGCAATAATTTTTTT+AGG | + | chr3_4:7212234-7212253 | Msa0488020:intron | 25.0% |
| !!! | TAATTTTTTTAGGTGTCTGA+TGG | + | chr3_4:7212244-7212263 | Msa0488020:intron | 25.0% |
| !! | TTCAATCAATTTTCACGAAA+CGG | - | chr3_4:7212329-7212348 | None:intergenic | 25.0% |
| ! | ATCTCTAATAACAAGCAATT+AGG | + | chr3_4:7212567-7212586 | Msa0488020:intron | 25.0% |
| ! | TCTCTAATAACAAGCAATTA+GGG | + | chr3_4:7212568-7212587 | Msa0488020:intron | 25.0% |
| ! | ATCTTTAACGATTGTTTCAA+CGG | - | chr3_4:7212867-7212886 | None:intergenic | 25.0% |
| ! | ATTTGCAAAAACTAAAACAG+TGG | + | chr3_4:7212948-7212967 | Msa0488020:intron | 25.0% |
| ! | TAAAAGTTATTGCTACAAAG+CGG | + | chr3_4:7213064-7213083 | Msa0488020:CDS | 25.0% |
| ! | CTTAAACTTAAACAGTGAAA+CGG | + | chr3_4:7213308-7213327 | Msa0488020:CDS | 25.0% |
| ! | TAAATTTAAGGGGTTAATCT+TGG | - | chr3_4:7213585-7213604 | None:intergenic | 25.0% |
| ! | TCATTAAGTAAACATAACCA+CGG | - | chr3_4:7213854-7213873 | None:intergenic | 25.0% |
| !! | ATAGACTTTTGATCAAGATA+AGG | + | chr3_4:7214113-7214132 | Msa0488020:intron | 25.0% |
| !! | TAGACTTTTGATCAAGATAA+GGG | + | chr3_4:7214114-7214133 | Msa0488020:intron | 25.0% |
| !!! | TTGTTTTATATAGGCTAGAT+TGG | + | chr3_4:7214323-7214342 | Msa0488020:intron | 25.0% |
| !! | TGTTTTATATAGGCTAGATT+GGG | + | chr3_4:7214324-7214343 | Msa0488020:intron | 25.0% |
| !!! | GTCTAAAAGTTTATTTTGCT+TGG | + | chr3_4:7214390-7214409 | Msa0488020:intron | 25.0% |
| !! | TTACGAATTCCTTTATTTCA+GGG | + | chr3_4:7214425-7214444 | Msa0488020:intron | 25.0% |
| ! | ATTGAGTTAGTCAATTGAAT+TGG | + | chr3_4:7214894-7214913 | Msa0488020:exon | 25.0% |
| ! | ATAAACTTGGCTAAATAAAC+AGG | - | chr3_4:7215101-7215120 | None:intergenic | 25.0% |
| !!! | TGGTTTTCTGAAAATAAACT+TGG | - | chr3_4:7215114-7215133 | None:intergenic | 25.0% |
| !!! | TTCACTCTGTTTTGTTTGAA+TGG | + | chr3_4:7207961-7207980 | Msa0488020:intron | 30.0% |
| ATAAGCTGTTTACCAAAACA+GGG | - | chr3_4:7208137-7208156 | None:intergenic | 30.0% | |
| AATAAGCTGTTTACCAAAAC+AGG | - | chr3_4:7208138-7208157 | None:intergenic | 30.0% | |
| ! | ACAGATTGATGGTTTCTTAT+TGG | + | chr3_4:7208412-7208431 | Msa0488020:intron | 30.0% |
| TCTCAAACTATCTTGTGATT+AGG | - | chr3_4:7208552-7208571 | None:intergenic | 30.0% | |
| ! | TCACAAGATAGTTTGAGATT+AGG | + | chr3_4:7208554-7208573 | Msa0488020:intron | 30.0% |
| ! | CACAAGATAGTTTGAGATTA+GGG | + | chr3_4:7208555-7208574 | Msa0488020:intron | 30.0% |
| !! | GTTGTTTTCATAAGCTATCT+TGG | + | chr3_4:7208590-7208609 | Msa0488020:intron | 30.0% |
| AAAAATCTGATGGAGAGAAA+TGG | + | chr3_4:7208908-7208927 | Msa0488020:CDS | 30.0% | |
| AAAATCTGATGGAGAGAAAT+GGG | + | chr3_4:7208909-7208928 | Msa0488020:CDS | 30.0% | |
| GTTGTATATAGATGAGAACA+TGG | - | chr3_4:7208995-7209014 | None:intergenic | 30.0% | |
| TATCAAGGTACATCTCTATT+AGG | + | chr3_4:7209039-7209058 | Msa0488020:intron | 30.0% | |
| ATCAAGGTACATCTCTATTA+GGG | + | chr3_4:7209040-7209059 | Msa0488020:intron | 30.0% | |
| ATTGAAGCTCATTAATCACT+CGG | - | chr3_4:7209305-7209324 | None:intergenic | 30.0% | |
| CAATTTAGGCTGAATCAATT+CGG | + | chr3_4:7209321-7209340 | Msa0488020:intron | 30.0% | |
| AACCGAAGAGTTAAAACAAA+AGG | + | chr3_4:7209427-7209446 | Msa0488020:intron | 30.0% | |
| !! | ACATAGTTTGTTACGTTAAG+TGG | + | chr3_4:7209521-7209540 | Msa0488020:intron | 30.0% |
| ATTTCATAATTCTACGGTGT+GGG | - | chr3_4:7209580-7209599 | None:intergenic | 30.0% | |
| TATTTCATAATTCTACGGTG+TGG | - | chr3_4:7209581-7209600 | None:intergenic | 30.0% | |
| CAAATTGAATAGTACAGTCA+CGG | - | chr3_4:7209679-7209698 | None:intergenic | 30.0% | |
| TTAAAGGAAGGGAATTTAAG+TGG | + | chr3_4:7209906-7209925 | Msa0488020:intron | 30.0% | |
| ! | AAATTTAACGTCTGGTTTGA+AGG | + | chr3_4:7210248-7210267 | Msa0488020:intron | 30.0% |
| AACATTGTTTCCTATGTTGT+TGG | - | chr3_4:7210483-7210502 | None:intergenic | 30.0% | |
| !! | TATCTTTAGGACGTAATAAG+TGG | + | chr3_4:7210514-7210533 | Msa0488020:intron | 30.0% |
| TACTACACAAACATGATAGT+TGG | - | chr3_4:7210887-7210906 | None:intergenic | 30.0% | |
| ATGAAGCTTATAATGCAGTA+TGG | + | chr3_4:7210952-7210971 | Msa0488020:CDS | 30.0% | |
| TTATAATGCAGTATGGTGTT+GGG | + | chr3_4:7210959-7210978 | Msa0488020:CDS | 30.0% | |
| AATGGCCATATATCTAATGT+TGG | + | chr3_4:7211165-7211184 | Msa0488020:CDS | 30.0% | |
| ATGGCCATATATCTAATGTT+GGG | + | chr3_4:7211166-7211185 | Msa0488020:CDS | 30.0% | |
| AAGACCCAACATTAGATATA+TGG | - | chr3_4:7211173-7211192 | None:intergenic | 30.0% | |
| GACAAATATTTGAAAGCAAG+GGG | + | chr3_4:7211295-7211314 | Msa0488020:intron | 30.0% | |
| ACAAATATTTGAAAGCAAGG+GGG | + | chr3_4:7211296-7211315 | Msa0488020:intron | 30.0% | |
| TGGTTACCAGAAAATTGTAT+TGG | - | chr3_4:7211594-7211613 | None:intergenic | 30.0% | |
| GACATGTTAGATAATGTTAG+AGG | - | chr3_4:7211646-7211665 | None:intergenic | 30.0% | |
| ! | CTATCGGTGATACTTTATTT+GGG | + | chr3_4:7212006-7212025 | Msa0488020:CDS | 30.0% |
| CACCTAAAAAAATTATTGCC+TGG | - | chr3_4:7212239-7212258 | None:intergenic | 30.0% | |
| ! | TCAATCAATTTTCACGAAAC+GGG | - | chr3_4:7212328-7212347 | None:intergenic | 30.0% |
| !! | TTAACATGTAACTTGTTCCT+AGG | + | chr3_4:7212473-7212492 | Msa0488020:intron | 30.0% |
| AAAATTAAAGCAATGCTCAG+AGG | - | chr3_4:7212504-7212523 | None:intergenic | 30.0% | |
| ! | CGATACAATTATGGTTAGTT+GGG | + | chr3_4:7212612-7212631 | Msa0488020:intron | 30.0% |
| GAGTCAAACAAAACATTTGA+AGG | + | chr3_4:7212648-7212667 | Msa0488020:intron | 30.0% | |
| TCTTAGTTACTGAATCAACT+AGG | - | chr3_4:7212782-7212801 | None:intergenic | 30.0% | |
| ! | GTTGATTCAGTAACTAAGAT+CGG | + | chr3_4:7212783-7212802 | Msa0488020:intron | 30.0% |
| !!! | TAGATATTCATTTTGGGGTT+CGG | + | chr3_4:7212997-7213016 | Msa0488020:intron | 30.0% |
| ! | GCAATAACTTTTACACCAAA+TGG | - | chr3_4:7213057-7213076 | None:intergenic | 30.0% |
| CTTCATTTCTTCCATGAAAA+AGG | + | chr3_4:7213549-7213568 | Msa0488020:CDS | 30.0% | |
| TAAGCTCATAATGTATGTAC+AGG | + | chr3_4:7213628-7213647 | Msa0488020:intron | 30.0% | |
| TAATGTATGTACAGGATGAT+AGG | + | chr3_4:7213636-7213655 | Msa0488020:intron | 30.0% | |
| TTTGTTCCTAAAACACAGAA+TGG | - | chr3_4:7213729-7213748 | None:intergenic | 30.0% | |
| TTTAACTGAAGAATGAGTTG+TGG | + | chr3_4:7213784-7213803 | Msa0488020:intron | 30.0% | |
| TGTATGAGTGCTTAAAACTA+CGG | - | chr3_4:7214248-7214267 | None:intergenic | 30.0% | |
| ! | GTTTTATATAGGCTAGATTG+GGG | + | chr3_4:7214325-7214344 | Msa0488020:intron | 30.0% |
| ! | TTTTATATAGGCTAGATTGG+GGG | + | chr3_4:7214326-7214345 | Msa0488020:intron | 30.0% |
| ! | GTTACGAATTCCTTTATTTC+AGG | + | chr3_4:7214424-7214443 | Msa0488020:intron | 30.0% |
| TTTACAGATCCATATGATTC+TGG | - | chr3_4:7214693-7214712 | None:intergenic | 30.0% | |
| !! | ACAAAAGCACTTTAAGCATA+GGG | - | chr3_4:7214732-7214751 | None:intergenic | 30.0% |
| !! | TACAAAAGCACTTTAAGCAT+AGG | - | chr3_4:7214733-7214752 | None:intergenic | 30.0% |
| ACAACCTATAGTAAAACAAC+AGG | - | chr3_4:7214828-7214847 | None:intergenic | 30.0% | |
| !! | GTTGTTTTACTATAGGTTGT+TGG | + | chr3_4:7214828-7214847 | Msa0488020:intron | 30.0% |
| ! | AAAGTGTGTTGTACTTGTTG+AGG | + | chr3_4:7207798-7207817 | Msa0488020:CDS | 35.0% |
| CTACAACAACTCAAGATTCA+AGG | + | chr3_4:7207870-7207889 | Msa0488020:CDS | 35.0% | |
| GCAGAATACAATATGCTCAT+TGG | - | chr3_4:7208086-7208105 | None:intergenic | 35.0% | |
| ! | TAAGCTTTGTGAGACTGTTT+GGG | - | chr3_4:7208336-7208355 | None:intergenic | 35.0% |
| ! | ATAAGCTTTGTGAGACTGTT+TGG | - | chr3_4:7208337-7208356 | None:intergenic | 35.0% |
| GTGGAATACAAGATACTCAT+TGG | - | chr3_4:7208530-7208549 | None:intergenic | 35.0% | |
| CAAACTATCTTGTGATTAGG+TGG | - | chr3_4:7208549-7208568 | None:intergenic | 35.0% | |
| ATAAGTTGTATGAGACCGTT+TGG | - | chr3_4:7208676-7208695 | None:intergenic | 35.0% | |
| CCAATAAGAAACCATCAATC+TGG | - | chr3_4:7208415-7208434 | None:intergenic | 35.0% | |
| ! | CCAGATTGATGGTTTCTTAT+TGG | + | chr3_4:7208750-7208769 | Msa0488020:intron | 35.0% |
| !! | TTTCAATATTGGTGCTGTGT+AGG | + | chr3_4:7208885-7208904 | Msa0488020:intron | 35.0% |
| TAGAGATGTACCTTGATAGA+TGG | - | chr3_4:7209037-7209056 | None:intergenic | 35.0% | |
| TTGAAGCTCATTAATCACTC+GGG | - | chr3_4:7209304-7209323 | None:intergenic | 35.0% | |
| GAATACCCAAATTTGATTCC+TGG | + | chr3_4:7209343-7209362 | Msa0488020:intron | 35.0% | |
| ! | TAATCTGAAATTCGGCTAGA+AGG | - | chr3_4:7209394-7209413 | None:intergenic | 35.0% |
| !! | TTTTAACTCTTCGGTTCACA+GGG | - | chr3_4:7209423-7209442 | None:intergenic | 35.0% |
| !! | GGATCATCCTCTTAGTTTTT+AGG | + | chr3_4:7209457-7209476 | Msa0488020:intron | 35.0% |
| TTTCATAATTCTACGGTGTG+GGG | - | chr3_4:7209579-7209598 | None:intergenic | 35.0% | |
| AATATGAATTGGATTGCCTC+TGG | - | chr3_4:7209624-7209643 | None:intergenic | 35.0% | |
| CGTGACTGTACTATTCAATT+TGG | + | chr3_4:7209677-7209696 | Msa0488020:intron | 35.0% | |
| TCTGTCATAAAGCAGTTCAA+AGG | - | chr3_4:7209745-7209764 | None:intergenic | 35.0% | |
| ! | TATCATTTGGGTTAACTTCC+TGG | + | chr3_4:7209881-7209900 | Msa0488020:intron | 35.0% |
| GGTTAACTTCCTGGATTTAA+AGG | + | chr3_4:7209890-7209909 | Msa0488020:intron | 35.0% | |
| AACTTCCTGGATTTAAAGGA+AGG | + | chr3_4:7209894-7209913 | Msa0488020:intron | 35.0% | |
| ACTTCCTGGATTTAAAGGAA+GGG | + | chr3_4:7209895-7209914 | Msa0488020:intron | 35.0% | |
| AATTCCCTTCCTTTAAATCC+AGG | - | chr3_4:7209902-7209921 | None:intergenic | 35.0% | |
| !! | GTTAAGGGTATCCAATCTAA+TGG | + | chr3_4:7209954-7209973 | Msa0488020:intron | 35.0% |
| !! | ATCCAATCTAATGGATTCGT+TGG | + | chr3_4:7209963-7209982 | Msa0488020:intron | 35.0% |
| GTGAAGATGTAAAAACTGCT+TGG | + | chr3_4:7210063-7210082 | Msa0488020:intron | 35.0% | |
| CTTGGTCAAAGATAAACAGA+CGG | + | chr3_4:7210081-7210100 | Msa0488020:intron | 35.0% | |
| TTGGTCAAAGATAAACAGAC+GGG | + | chr3_4:7210082-7210101 | Msa0488020:intron | 35.0% | |
| CGTTAAATTTCTTGCACAAC+AGG | - | chr3_4:7210238-7210257 | None:intergenic | 35.0% | |
| TGTGCAAGAAATTTAACGTC+TGG | + | chr3_4:7210240-7210259 | Msa0488020:intron | 35.0% | |
| TCGGTTCATGATACGTTAAA+TGG | - | chr3_4:7210280-7210299 | None:intergenic | 35.0% | |
| TTTAACGTATCATGAACCGA+TGG | + | chr3_4:7210280-7210299 | Msa0488020:intron | 35.0% | |
| AAAAGCAATGGCATATGCTT+TGG | + | chr3_4:7210308-7210327 | Msa0488020:intron | 35.0% | |
| AAAGCAATGGCATATGCTTT+GGG | + | chr3_4:7210309-7210328 | Msa0488020:intron | 35.0% | |
| TTCTCTGAACATTGATGTGA+GGG | - | chr3_4:7210353-7210372 | None:intergenic | 35.0% | |
| TTTCTCTGAACATTGATGTG+AGG | - | chr3_4:7210354-7210373 | None:intergenic | 35.0% | |
| ! | TTAAAATTGGTGATCTTGGG+TGG | + | chr3_4:7210377-7210396 | Msa0488020:intron | 35.0% |
| CACAGAAGTAAATGAAGAGA+GGG | + | chr3_4:7210403-7210422 | Msa0488020:intron | 35.0% | |
| AAATGAAGAGAGGGTAATAG+TGG | + | chr3_4:7210412-7210431 | Msa0488020:intron | 35.0% | |
| TTCTTATGTGCAGGAAATGA+TGG | + | chr3_4:7210451-7210470 | Msa0488020:intron | 35.0% | |
| AAGTGTAATACGAAAGTGGT+GGG | - | chr3_4:7210762-7210781 | None:intergenic | 35.0% | |
| TTCCAAGTGTAATACGAAAG+TGG | - | chr3_4:7210766-7210785 | None:intergenic | 35.0% | |
| AAGCTGTCTATTGCATTTGT+AGG | + | chr3_4:7210822-7210841 | Msa0488020:intron | 35.0% | |
| CTTATAATGCAGTATGGTGT+TGG | + | chr3_4:7210958-7210977 | Msa0488020:CDS | 35.0% | |
| GAAGATACTATACTTGCTTG+CGG | - | chr3_4:7211198-7211217 | None:intergenic | 35.0% | |
| TGAGAAGAAAATACTTAGCC+TGG | + | chr3_4:7211326-7211345 | Msa0488020:intron | 35.0% | |
| ACACATTCTTATACATCACC+AGG | - | chr3_4:7211347-7211366 | None:intergenic | 35.0% | |
| !!! | TGGTTTTGTCATGCAGATTT+TGG | - | chr3_4:7211485-7211504 | None:intergenic | 35.0% |
| AAAATCTGCATGACAAAACC+AGG | + | chr3_4:7211484-7211503 | Msa0488020:intron | 35.0% | |
| ! | TTTGATTTATTCAGTGCTCC+TGG | - | chr3_4:7211505-7211524 | None:intergenic | 35.0% |
| !! | GAAACCATGTGCAGTTTTAA+AGG | + | chr3_4:7211551-7211570 | Msa0488020:intron | 35.0% |
| ! | TCATCGCCAATACAATTTTC+TGG | + | chr3_4:7211585-7211604 | Msa0488020:intron | 35.0% |
| ATCTAACATGTCCTCATGTT+TGG | + | chr3_4:7211654-7211673 | Msa0488020:intron | 35.0% | |
| TCTAACATGTCCTCATGTTT+GGG | + | chr3_4:7211655-7211674 | Msa0488020:intron | 35.0% | |
| AGCTTATGCCAAAGCAATTA+TGG | - | chr3_4:7211691-7211710 | None:intergenic | 35.0% | |
| TAATTGCTTTGGCATAAGCT+TGG | + | chr3_4:7211691-7211710 | Msa0488020:intron | 35.0% | |
| AATTGCTTTGGCATAAGCTT+GGG | + | chr3_4:7211692-7211711 | Msa0488020:intron | 35.0% | |
| ! | CCAAATAAAGTATCACCGAT+AGG | - | chr3_4:7212008-7212027 | None:intergenic | 35.0% |
| CCTATCGGTGATACTTTATT+TGG | + | chr3_4:7212005-7212024 | Msa0488020:CDS | 35.0% | |
| TGTACTATTCATGTGCTTCT+AGG | + | chr3_4:7212400-7212419 | Msa0488020:intron | 35.0% | |
| GCGATACAATTATGGTTAGT+TGG | + | chr3_4:7212611-7212630 | Msa0488020:intron | 35.0% | |
| ! | TGGTTAGTTGGGTTGTAAAT+AGG | + | chr3_4:7212623-7212642 | Msa0488020:intron | 35.0% |
| !!! | AGATATTCATTTTGGGGTTC+GGG | + | chr3_4:7212998-7213017 | Msa0488020:intron | 35.0% |
| TGATGATCTTGTTGATGTGA+AGG | + | chr3_4:7213230-7213249 | Msa0488020:CDS | 35.0% | |
| GATGATCTTGTTGATGTGAA+GGG | + | chr3_4:7213231-7213250 | Msa0488020:CDS | 35.0% | |
| AAGTAACAGAAGTAGAAGCT+TGG | - | chr3_4:7213378-7213397 | None:intergenic | 35.0% | |
| ! | TACTTCTGTTACTTCTAGCT+AGG | + | chr3_4:7213384-7213403 | Msa0488020:intron | 35.0% |
| ATAAACTAAGCCTAGTATGC+TGG | + | chr3_4:7213459-7213478 | Msa0488020:intron | 35.0% | |
| ! | CTTGGATATGATGTCTTTTC+AGG | + | chr3_4:7213507-7213526 | Msa0488020:intron | 35.0% |
| !! | GATGGTACAAACCTTTTTCA+TGG | - | chr3_4:7213563-7213582 | None:intergenic | 35.0% |
| TTTAAGGGGTTAATCTTGGA+TGG | - | chr3_4:7213581-7213600 | None:intergenic | 35.0% | |
| GTGTCTCTGTCTTTATTCTT+TGG | + | chr3_4:7213663-7213682 | Msa0488020:intron | 35.0% | |
| ATGATAAAAATCTGTCCTCC+TGG | + | chr3_4:7213808-7213827 | Msa0488020:intron | 35.0% | |
| TGATAAAAATCTGTCCTCCT+GGG | + | chr3_4:7213809-7213828 | Msa0488020:intron | 35.0% | |
| GTATGAGTGCTTAAAACTAC+GGG | - | chr3_4:7214247-7214266 | None:intergenic | 35.0% | |
| TCTAGCAACATTAACCAGAA+GGG | - | chr3_4:7214453-7214472 | None:intergenic | 35.0% | |
| ATCTGATCATTGGGATCAAA+TGG | - | chr3_4:7214563-7214582 | None:intergenic | 35.0% | |
| !! | CCATATGATTCTGGAATAAG+TGG | - | chr3_4:7214684-7214703 | None:intergenic | 35.0% |
| CCACTTATTCCAGAATCATA+TGG | + | chr3_4:7214681-7214700 | Msa0488020:intron | 35.0% | |
| !!! | CTTGCCTGTTGTTTTACTAT+AGG | + | chr3_4:7214821-7214840 | Msa0488020:intron | 35.0% |
| ACTAACTCAATTCCTGTCAA+AGG | - | chr3_4:7214885-7214904 | None:intergenic | 35.0% | |
| AATACAGAACAATCATTGCC+TGG | - | chr3_4:7215015-7215034 | None:intergenic | 35.0% | |
| TTCGCGAAAACCAAATAAGT+CGG | + | chr3_4:7215054-7215073 | Msa0488020:three_prime_UTR | 35.0% | |
| CAAACATCATCCGACTTATT+TGG | - | chr3_4:7215067-7215086 | None:intergenic | 35.0% | |
| AGAGAAGAGAAGTGAGTGTT+GGG | - | chr3_4:7207852-7207871 | None:intergenic | 40.0% | |
| TAGAGAAGAGAAGTGAGTGT+TGG | - | chr3_4:7207853-7207872 | None:intergenic | 40.0% | |
| ! | TTGAGATTAAGGCCCTGTTT+TGG | + | chr3_4:7208122-7208141 | Msa0488020:intron | 40.0% |
| TCTGTCATGTCATACGACTA+GGG | - | chr3_4:7208397-7208416 | None:intergenic | 40.0% | |
| ATCTGTCATGTCATACGACT+AGG | - | chr3_4:7208398-7208417 | None:intergenic | 40.0% | |
| CGTATGACATGACAGATTGA+TGG | + | chr3_4:7208401-7208420 | Msa0488020:intron | 40.0% | |
| TCATACAACTAAGGCCTGTT+TGG | - | chr3_4:7208726-7208745 | None:intergenic | 40.0% | |
| TCTGGCATGTCATACAACTA+AGG | - | chr3_4:7208735-7208754 | None:intergenic | 40.0% | |
| TGTATGACATGCCAGATTGA+TGG | + | chr3_4:7208739-7208758 | Msa0488020:intron | 40.0% | |
| GCTGTGTAGGAAAAATCTGA+TGG | + | chr3_4:7208898-7208917 | Msa0488020:intron | 40.0% | |
| !!! | ACGACTCGTGTTTTGTTTTG+TGG | + | chr3_4:7208959-7208978 | Msa0488020:CDS | 40.0% |
| GCAGAATCATCCATCTATCA+AGG | + | chr3_4:7209024-7209043 | Msa0488020:CDS | 40.0% | |
| TCCAGCCAGGAATCAAATTT+GGG | - | chr3_4:7209351-7209370 | None:intergenic | 40.0% | |
| TTCCAGCCAGGAATCAAATT+TGG | - | chr3_4:7209352-7209371 | None:intergenic | 40.0% | |
| AGCCGAATTTCAGATTACCA+AGG | + | chr3_4:7209397-7209416 | Msa0488020:intron | 40.0% | |
| ! | GGCCTTGGTAATCTGAAATT+CGG | - | chr3_4:7209402-7209421 | None:intergenic | 40.0% |
| !!! | GTTTTAACTCTTCGGTTCAC+AGG | - | chr3_4:7209424-7209443 | None:intergenic | 40.0% |
| ACGTTAAGTGGCTTCCTATT+TGG | + | chr3_4:7209533-7209552 | Msa0488020:intron | 40.0% | |
| !!! | GGATGTGTTTTTTGATCCAG+AGG | + | chr3_4:7209605-7209624 | Msa0488020:intron | 40.0% |
| ATAGTACAGTCACGGAACTT+TGG | - | chr3_4:7209671-7209690 | None:intergenic | 40.0% | |
| AGTTCCAGTGATTGTCAGAT+TGG | - | chr3_4:7209775-7209794 | None:intergenic | 40.0% | |
| AATCTGACAATCACTGGAAC+TGG | + | chr3_4:7209774-7209793 | Msa0488020:intron | 40.0% | |
| AAGGGAATTTAAGTGGCTAG+CGG | + | chr3_4:7209913-7209932 | Msa0488020:intron | 40.0% | |
| CTCCAACGAATCCATTAGAT+TGG | - | chr3_4:7209968-7209987 | None:intergenic | 40.0% | |
| TCGTTGGAGAAGAATGTTGA+AGG | + | chr3_4:7209979-7209998 | Msa0488020:intron | 40.0% | |
| CGTTGGAGAAGAATGTTGAA+GGG | + | chr3_4:7209980-7209999 | Msa0488020:intron | 40.0% | |
| ! | ATGAGTAGTGGAATGAATGG+AGG | + | chr3_4:7210020-7210039 | Msa0488020:intron | 40.0% |
| ! | CACTAATAGTCGCTCTGAAT+TGG | - | chr3_4:7210046-7210065 | None:intergenic | 40.0% |
| CAGGAGTGATGAATACAGAA+TGG | + | chr3_4:7210171-7210190 | Msa0488020:intron | 40.0% | |
| CAGAATGGCAGTTAAGAAAC+AGG | + | chr3_4:7210186-7210205 | Msa0488020:intron | 40.0% | |
| ! | AGGAGTTACCAGCTTTTGAT+GGG | + | chr3_4:7210206-7210225 | Msa0488020:intron | 40.0% |
| GCACAGAAGTAAATGAAGAG+AGG | + | chr3_4:7210402-7210421 | Msa0488020:intron | 40.0% | |
| AGAGAGGGTAATAGTGGTTA+TGG | + | chr3_4:7210418-7210437 | Msa0488020:intron | 40.0% | |
| ATGGAATCAGCCAACAACAT+AGG | + | chr3_4:7210470-7210489 | Msa0488020:intron | 40.0% | |
| CAAGTGTAATACGAAAGTGG+TGG | - | chr3_4:7210763-7210782 | None:intergenic | 40.0% | |
| CACCACTTTCGTATTACACT+TGG | + | chr3_4:7210761-7210780 | Msa0488020:intron | 40.0% | |
| TGATAGTTGGCAATAGCCTT+GGG | - | chr3_4:7210874-7210893 | None:intergenic | 40.0% | |
| ATGATAGTTGGCAATAGCCT+TGG | - | chr3_4:7210875-7210894 | None:intergenic | 40.0% | |
| AGCTCGACTGACAATAATCA+CGG | - | chr3_4:7210995-7211014 | None:intergenic | 40.0% | |
| !! | TGTCAGTCGAGCTTTATTGA+TGG | + | chr3_4:7211002-7211021 | Msa0488020:intron | 40.0% |
| CATCGATATCAACACCTAAG+AGG | - | chr3_4:7211072-7211091 | None:intergenic | 40.0% | |
| AGCATGGAATCAAAGTTGCT+AGG | + | chr3_4:7211101-7211120 | Msa0488020:CDS | 40.0% | |
| TTCAGTTGCATGTGCTGAAA+TGG | + | chr3_4:7211147-7211166 | Msa0488020:CDS | 40.0% | |
| TTTCAGTTACGCTATCCTGA+TGG | + | chr3_4:7211366-7211385 | Msa0488020:intron | 40.0% | |
| ACAATTGAGTCATCTCCATC+AGG | - | chr3_4:7211384-7211403 | None:intergenic | 40.0% | |
| CTGCACATGGTTTCTACAAT+TGG | - | chr3_4:7211545-7211564 | None:intergenic | 40.0% | |
| !!! | ACCATGTGCAGTTTTAAAGG+CGG | + | chr3_4:7211554-7211573 | Msa0488020:intron | 40.0% |
| !! | TTTCTTTTAGTTGACCTGCG+AGG | - | chr3_4:7211617-7211636 | None:intergenic | 40.0% |
| GCAGGTCAACTAAAAGAAAC+TGG | + | chr3_4:7211618-7211637 | Msa0488020:intron | 40.0% | |
| ATGTCCTCATGTTTGGGTAT+GGG | + | chr3_4:7211661-7211680 | Msa0488020:intron | 40.0% | |
| TGGGAAAGCCATAATTGCTT+TGG | + | chr3_4:7211680-7211699 | Msa0488020:intron | 40.0% | |
| CGAGAAGAGAAAAAGATGCA+GGG | - | chr3_4:7211787-7211806 | None:intergenic | 40.0% | |
| TGCAGATTTCCATACAGCAA+AGG | + | chr3_4:7211970-7211989 | Msa0488020:CDS | 40.0% | |
| TCATCAAAAGCAATGTCCCA+TGG | - | chr3_4:7212102-7212121 | None:intergenic | 40.0% | |
| !! | TGGGACATTGCTTTTGATGA+TGG | + | chr3_4:7212102-7212121 | Msa0488020:intron | 40.0% |
| !! | TGATGATGGTTAGTTGCATG+AGG | + | chr3_4:7212116-7212135 | Msa0488020:intron | 40.0% |
| ! | CTTAAAAAGGAGCGTGAAGT+GGG | + | chr3_4:7212205-7212224 | Msa0488020:intron | 40.0% |
| !! | TTTAGGTGTCTGATGGACTT+TGG | + | chr3_4:7212251-7212270 | Msa0488020:intron | 40.0% |
| !! | GAGGCTCTGAAATTCATGTA+AGG | + | chr3_4:7212434-7212453 | Msa0488020:intron | 40.0% |
| AGGGATACTACACATGAGTA+CGG | + | chr3_4:7212587-7212606 | Msa0488020:intron | 40.0% | |
| !! | ACTGAAATAGATCGGCTTGT+TGG | + | chr3_4:7212705-7212724 | Msa0488020:intron | 40.0% |
| !! | CTGAAATAGATCGGCTTGTT+GGG | + | chr3_4:7212706-7212725 | Msa0488020:intron | 40.0% |
| AACGATTGTTTCAACGGAAC+AGG | - | chr3_4:7212861-7212880 | None:intergenic | 40.0% | |
| ! | CATTTGTTTCTTCCCTCATG+TGG | + | chr3_4:7212905-7212924 | Msa0488020:intron | 40.0% |
| GTAAAAGTTGCACCACATGA+GGG | - | chr3_4:7212920-7212939 | None:intergenic | 40.0% | |
| TGTAAAAGTTGCACCACATG+AGG | - | chr3_4:7212921-7212940 | None:intergenic | 40.0% | |
| TTATTGCTACAAAGCGGAGT+TGG | + | chr3_4:7213070-7213089 | Msa0488020:CDS | 40.0% | |
| TATTGCTACAAAGCGGAGTT+GGG | + | chr3_4:7213071-7213090 | Msa0488020:CDS | 40.0% | |
| ! | GCCTAGTATGCTGGAATTTT+TGG | + | chr3_4:7213468-7213487 | Msa0488020:intron | 40.0% |
| GCCAAAAATTCCAGCATACT+AGG | - | chr3_4:7213472-7213491 | None:intergenic | 40.0% | |
| ! | GGCATGCATACTTATTGACT+TGG | + | chr3_4:7213489-7213508 | Msa0488020:intron | 40.0% |
| !! | GATATGATGTCTTTTCAGGC+TGG | + | chr3_4:7213511-7213530 | Msa0488020:intron | 40.0% |
| ! | CAAGGTCCATTCTGTGTTTT+AGG | + | chr3_4:7213720-7213739 | Msa0488020:intron | 40.0% |
| TAACCACGGCTCAATTGTAA+GGG | - | chr3_4:7213840-7213859 | None:intergenic | 40.0% | |
| ATAACCACGGCTCAATTGTA+AGG | - | chr3_4:7213841-7213860 | None:intergenic | 40.0% | |
| AAATGTCTGCGATCACTACT+GGG | - | chr3_4:7214299-7214318 | None:intergenic | 40.0% | |
| CTCTAGCAACATTAACCAGA+AGG | - | chr3_4:7214454-7214473 | None:intergenic | 40.0% | |
| ! | CTTCTGGTTAATGTTGCTAG+AGG | + | chr3_4:7214452-7214471 | Msa0488020:CDS | 40.0% |
| ! | AGGTCCTCTTTTAGACTATG+AGG | + | chr3_4:7214472-7214491 | Msa0488020:CDS | 40.0% |
| ACAGCCTCATAGTCTAAAAG+AGG | - | chr3_4:7214479-7214498 | None:intergenic | 40.0% | |
| ! | TCTTTTAGACTATGAGGCTG+TGG | + | chr3_4:7214478-7214497 | Msa0488020:CDS | 40.0% |
| GTGGTCAAAAACCTTGAATC+CGG | + | chr3_4:7214497-7214516 | Msa0488020:CDS | 40.0% | |
| ATCATGACTCCTCATATTGC+AGG | + | chr3_4:7214602-7214621 | Msa0488020:CDS | 40.0% | |
| AGAACACTCCTATAGATCCA+TGG | + | chr3_4:7214631-7214650 | Msa0488020:CDS | 40.0% | |
| AACCTTAGCCATGGATCTAT+AGG | - | chr3_4:7214642-7214661 | None:intergenic | 40.0% | |
| !! | ACTATAGGTTGTTGGTGATG+TGG | + | chr3_4:7214836-7214855 | Msa0488020:intron | 40.0% |
| GGATGAAGATGAAACCGATG+AGG | + | chr3_4:7207982-7208001 | Msa0488020:intron | 45.0% | |
| TCATACGACTAGGGTCTGTT+TGG | - | chr3_4:7208388-7208407 | None:intergenic | 45.0% | |
| GGCTTAACGAGCTTATCTAC+TGG | - | chr3_4:7208700-7208719 | None:intergenic | 45.0% | |
| CTCGTTAAGCCAATCCAAAC+AGG | + | chr3_4:7208709-7208728 | Msa0488020:intron | 45.0% | |
| CAACTAAGGCCTGTTTGGAT+TGG | - | chr3_4:7208721-7208740 | None:intergenic | 45.0% | |
| AGATGAGAACATGGGAACTG+AGG | - | chr3_4:7208986-7209005 | None:intergenic | 45.0% | |
| GAGATCATCCTCTAACCAAG+TGG | + | chr3_4:7209273-7209292 | Msa0488020:intron | 45.0% | |
| TCATCCTCTAACCAAGTGGA+TGG | + | chr3_4:7209277-7209296 | Msa0488020:intron | 45.0% | |
| ACCCAAATTTGATTCCTGGC+TGG | + | chr3_4:7209347-7209366 | Msa0488020:intron | 45.0% | |
| ! | CTAGAAGGTACGTCTGACTA+AGG | - | chr3_4:7209379-7209398 | None:intergenic | 45.0% |
| GATGCCAATCTGACAATCAC+TGG | + | chr3_4:7209768-7209787 | Msa0488020:intron | 45.0% | |
| AATCACTGGAACTGGTGTGA+TGG | + | chr3_4:7209782-7209801 | Msa0488020:intron | 45.0% | |
| !! | AATGTTGAAGGGCTAGCTTC+TGG | + | chr3_4:7209991-7210010 | Msa0488020:intron | 45.0% |
| !! | ATGTTGAAGGGCTAGCTTCT+GGG | + | chr3_4:7209992-7210011 | Msa0488020:intron | 45.0% |
| ! | GGCATGAGTAGTGGAATGAA+TGG | + | chr3_4:7210017-7210036 | Msa0488020:intron | 45.0% |
| CAAAGATAAACAGACGGGCA+CGG | + | chr3_4:7210087-7210106 | Msa0488020:intron | 45.0% | |
| ! | CAGGAGTTACCAGCTTTTGA+TGG | + | chr3_4:7210205-7210224 | Msa0488020:intron | 45.0% |
| ! | GGAGTTACCAGCTTTTGATG+GGG | + | chr3_4:7210207-7210226 | Msa0488020:intron | 45.0% |
| !! | CCATTGCTTTTCCTCTCCAT+CGG | - | chr3_4:7210299-7210318 | None:intergenic | 45.0% |
| ! | AATGGCATATGCTTTGGGTG+CGG | + | chr3_4:7210314-7210333 | Msa0488020:intron | 45.0% |
| CTGAACATTGATGTGAGGGA+CGG | - | chr3_4:7210349-7210368 | None:intergenic | 45.0% | |
| ! | CAGAGCTGATTCTTATGTGC+AGG | + | chr3_4:7210442-7210461 | Msa0488020:intron | 45.0% |
| CCTTGGGAATTTCTTCCAAC+GGG | - | chr3_4:7210858-7210877 | None:intergenic | 45.0% | |
| GCCTTGGGAATTTCTTCCAA+CGG | - | chr3_4:7210859-7210878 | None:intergenic | 45.0% | |
| ATCGATGCTGCAACAAAGCA+TGG | + | chr3_4:7211085-7211104 | Msa0488020:CDS | 45.0% | |
| AATTTCCAGTAGCACCACTG+GGG | - | chr3_4:7211129-7211148 | None:intergenic | 45.0% | |
| GAATTTCCAGTAGCACCACT+GGG | - | chr3_4:7211130-7211149 | None:intergenic | 45.0% | |
| TGAATTTCCAGTAGCACCAC+TGG | - | chr3_4:7211131-7211150 | None:intergenic | 45.0% | |
| !! | ACCGCCTTTAAAACTGCACA+TGG | - | chr3_4:7211558-7211577 | None:intergenic | 45.0% |
| CATGTCCTCATGTTTGGGTA+TGG | + | chr3_4:7211660-7211679 | Msa0488020:intron | 45.0% | |
| CTTTCCCATACCCAAACATG+AGG | - | chr3_4:7211668-7211687 | None:intergenic | 45.0% | |
| GCGAGAAGAGAAAAAGATGC+AGG | - | chr3_4:7211788-7211807 | None:intergenic | 45.0% | |
| TTGTGTCCAGGTGCACAAAA+GGG | - | chr3_4:7211815-7211834 | None:intergenic | 45.0% | |
| TTTGTGTCCAGGTGCACAAA+AGG | - | chr3_4:7211816-7211835 | None:intergenic | 45.0% | |
| ! | GCATGACAGATTTTGTGTCC+AGG | - | chr3_4:7211827-7211846 | None:intergenic | 45.0% |
| TCCATACAGCAAAGGAAGCT+TGG | + | chr3_4:7211978-7211997 | Msa0488020:CDS | 45.0% | |
| ! | TCCAAGCTTCCTTTGCTGTA+TGG | - | chr3_4:7211982-7212001 | None:intergenic | 45.0% |
| ! | CCACTTCACGCTCCTTTTTA+AGG | - | chr3_4:7212207-7212226 | None:intergenic | 45.0% |
| ! | CCTTAAAAAGGAGCGTGAAG+TGG | + | chr3_4:7212204-7212223 | Msa0488020:intron | 45.0% |
| AATGCTCAGAGGAGATTCCT+AGG | - | chr3_4:7212493-7212512 | None:intergenic | 45.0% | |
| GGGATACTACACATGAGTAC+GGG | + | chr3_4:7212588-7212607 | Msa0488020:intron | 45.0% | |
| GGATACTACACATGAGTACG+GGG | + | chr3_4:7212589-7212608 | Msa0488020:intron | 45.0% | |
| AGTACGGGGCGATACAATTA+TGG | + | chr3_4:7212603-7212622 | Msa0488020:intron | 45.0% | |
| ! | AACTAAGATCGGCTCAAGCT+AGG | + | chr3_4:7212794-7212813 | Msa0488020:intron | 45.0% |
| TTGTTTCAACGGAACAGGCT+AGG | - | chr3_4:7212856-7212875 | None:intergenic | 45.0% | |
| !!! | ATTTTGGGGTTCGGGAACAT+TGG | + | chr3_4:7213006-7213025 | Msa0488020:CDS | 45.0% |
| GCACGACGATTGAAACCATT+TGG | + | chr3_4:7213039-7213058 | Msa0488020:CDS | 45.0% | |
| ! | ATTTTCCTTCCCTGTTCTCG+TGG | + | chr3_4:7213132-7213151 | Msa0488020:intron | 45.0% |
| AGCAGTAATCCACGAGAACA+GGG | - | chr3_4:7213144-7213163 | None:intergenic | 45.0% | |
| AAGCAGTAATCCACGAGAAC+AGG | - | chr3_4:7213145-7213164 | None:intergenic | 45.0% | |
| CAATTGTAAGGGAACATCCC+AGG | - | chr3_4:7213829-7213848 | None:intergenic | 45.0% | |
| AGTAGCCTAAGGCTGTAAGT+TGG | + | chr3_4:7214008-7214027 | Msa0488020:intron | 45.0% | |
| ! | GTAAGTTGGAGGACATAGTG+AGG | + | chr3_4:7214022-7214041 | Msa0488020:intron | 45.0% |
| !! | TCCAATCACATGCTGACTTG+AGG | + | chr3_4:7214046-7214065 | Msa0488020:intron | 45.0% |
| TCCTCAAGTCAGCATGTGAT+TGG | - | chr3_4:7214050-7214069 | None:intergenic | 45.0% | |
| GAAATGTCTGCGATCACTAC+TGG | - | chr3_4:7214300-7214319 | None:intergenic | 45.0% | |
| !! | AGAAGGGCACCCTGAAATAA+AGG | - | chr3_4:7214437-7214456 | None:intergenic | 45.0% |
| ! | TTTATTTCAGGGTGCCCTTC+TGG | + | chr3_4:7214436-7214455 | Msa0488020:intron | 45.0% |
| AACCTTGAATCCGGACACTT+AGG | + | chr3_4:7214506-7214525 | Msa0488020:CDS | 45.0% | |
| TTGAATCCGGACACTTAGGA+GGG | + | chr3_4:7214510-7214529 | Msa0488020:CDS | 45.0% | |
| TCTGTAACGCCTGCAATATG+AGG | - | chr3_4:7214614-7214633 | None:intergenic | 45.0% | |
| CTCCTATAGATCCATGGCTA+AGG | + | chr3_4:7214637-7214656 | Msa0488020:CDS | 45.0% | |
| ATCCATGGCTAAGGTTTGTG+TGG | + | chr3_4:7214646-7214665 | Msa0488020:intron | 45.0% | |
| GTGGTTCTTCAACTTCATGC+TGG | + | chr3_4:7214855-7214874 | Msa0488020:CDS | 45.0% | |
| CATGCTGGAAATCCTTTGAC+AGG | + | chr3_4:7214870-7214889 | Msa0488020:CDS | 45.0% | |
| !!! | TTTAATTTTTTTTTTTATCA+AGG | + | chr3_4:7212515-7212534 | Msa0488020:intron | 5.0% |
| CGACTAGGGTCTGTTTGGAT+TGG | - | chr3_4:7208383-7208402 | None:intergenic | 50.0% | |
| GACTAAGGATTGTTCCAGCC+AGG | - | chr3_4:7209364-7209383 | None:intergenic | 50.0% | |
| !! | TTCTGGGTTGGCATGAGTAG+TGG | + | chr3_4:7210008-7210027 | Msa0488020:intron | 50.0% |
| ! | CTGCTGCTACAGCTCAGTTT+TGG | - | chr3_4:7210154-7210173 | None:intergenic | 50.0% |
| CAAAACTGAGCTGTAGCAGC+AGG | + | chr3_4:7210152-7210171 | Msa0488020:intron | 50.0% | |
| GGATTTGCCCCATCAAAAGC+TGG | - | chr3_4:7210217-7210236 | None:intergenic | 50.0% | |
| CGTATCATGAACCGATGGAG+AGG | + | chr3_4:7210285-7210304 | Msa0488020:intron | 50.0% | |
| CCGATGGAGAGGAAAAGCAA+TGG | + | chr3_4:7210296-7210315 | Msa0488020:intron | 50.0% | |
| ! | TATGCTTTGGGTGCGGAGAA+AGG | + | chr3_4:7210321-7210340 | Msa0488020:intron | 50.0% |
| GGTATCTATCATGGGGCTTG+TGG | + | chr3_4:7210623-7210642 | Msa0488020:intron | 50.0% | |
| !! | GTAGGTTGATGTTCTCCCGT+TGG | + | chr3_4:7210840-7210859 | Msa0488020:intron | 50.0% |
| CCCGTTGGAAGAAATTCCCA+AGG | + | chr3_4:7210855-7210874 | Msa0488020:CDS | 50.0% | |
| ! | AATGCAGTATGGTGTTGGGC+TGG | + | chr3_4:7210963-7210982 | Msa0488020:CDS | 50.0% |
| AAAGTTGCTAGGATCCCCAG+TGG | + | chr3_4:7211112-7211131 | Msa0488020:CDS | 50.0% | |
| !! | TTTTCTGGTAACCACCTCGC+AGG | + | chr3_4:7211600-7211619 | Msa0488020:intron | 50.0% |
| !! | CTTTTAGTTGACCTGCGAGG+TGG | - | chr3_4:7211614-7211633 | None:intergenic | 50.0% |
| TCCAGGTGCACAAAAGGGAA+TGG | - | chr3_4:7211810-7211829 | None:intergenic | 50.0% | |
| AGGAAGCTTGGAGAGCCTAT+CGG | + | chr3_4:7211990-7212009 | Msa0488020:CDS | 50.0% | |
| GTGAAGTGGGTAGATGATCC+AGG | + | chr3_4:7212218-7212237 | Msa0488020:intron | 50.0% | |
| ATGTGCTTCTAGGCTGTGTC+TGG | + | chr3_4:7212410-7212429 | Msa0488020:intron | 50.0% | |
| GCTCAAGCTAGGTCTGATGT+AGG | + | chr3_4:7212805-7212824 | Msa0488020:intron | 50.0% | |
| AGCTAGGTCTGATGTAGGCT+AGG | + | chr3_4:7212810-7212829 | Msa0488020:intron | 50.0% | |
| TCTGATGTAGGCTAGGCCAT+AGG | + | chr3_4:7212817-7212836 | Msa0488020:intron | 50.0% | |
| GTAATCCACGAGAACAGGGA+AGG | - | chr3_4:7213140-7213159 | None:intergenic | 50.0% | |
| TGCACACACACACACACGTA+GGG | + | chr3_4:7213696-7213715 | Msa0488020:intron | 50.0% | |
| TTGTAAGGGAACATCCCAGG+AGG | - | chr3_4:7213826-7213845 | None:intergenic | 50.0% | |
| GTTCCCTTACAATTGAGCCG+TGG | + | chr3_4:7213834-7213853 | Msa0488020:intron | 50.0% | |
| ! | AGCCTAAGGCTGTAAGTTGG+AGG | + | chr3_4:7214011-7214030 | Msa0488020:intron | 50.0% |
| GTCCTCCAACTTACAGCCTT+AGG | - | chr3_4:7214016-7214035 | None:intergenic | 50.0% | |
| CTCCTAAGTGTCCGGATTCA+AGG | - | chr3_4:7214511-7214530 | None:intergenic | 50.0% | |
| CTTGAATCCGGACACTTAGG+AGG | + | chr3_4:7214509-7214528 | Msa0488020:CDS | 50.0% | |
| AGGAACCGATGTTGCATGGA+CGG | + | chr3_4:7214535-7214554 | Msa0488020:CDS | 50.0% | |
| AGCCACACAAACCTTAGCCA+TGG | - | chr3_4:7214651-7214670 | None:intergenic | 50.0% | |
| GGGACCATCCACTTGGTTAG+AGG | - | chr3_4:7209284-7209303 | None:intergenic | 55.0% | |
| ATCACTCGGGACCATCCACT+TGG | - | chr3_4:7209291-7209310 | None:intergenic | 55.0% | |
| !! | TGAAGGGCTAGCTTCTGGGT+TGG | + | chr3_4:7209996-7210015 | Msa0488020:intron | 55.0% |
| ! | CAGTATGGTGTTGGGCTGGA+AGG | + | chr3_4:7210967-7210986 | Msa0488020:CDS | 55.0% |
| ! | GCCATTCCCTTTTGTGCACC+TGG | + | chr3_4:7211806-7211825 | Msa0488020:intron | 55.0% |
| CTTCTAGGCTGTGTCTGGAG+AGG | + | chr3_4:7212415-7212434 | Msa0488020:intron | 55.0% | |
| AGGCCATAGGCTCCATTGAC+CGG | + | chr3_4:7212830-7212849 | Msa0488020:intron | 55.0% | |
| TTCAACGGAACAGGCTAGGC+CGG | - | chr3_4:7212852-7212871 | None:intergenic | 55.0% | |
| GTGCACACACACACACACGT+AGG | + | chr3_4:7213695-7213714 | Msa0488020:intron | 55.0% | |
| CACACACACACGTAGGGTCA+AGG | + | chr3_4:7213702-7213721 | Msa0488020:intron | 55.0% | |
| TGGGTTCAAGCGCAAGAGGT+TGG | - | chr3_4:7214280-7214299 | None:intergenic | 55.0% | |
| CTACTGGGTTCAAGCGCAAG+AGG | - | chr3_4:7214284-7214303 | None:intergenic | 55.0% | |
| TCCTAGCCCTCCTAAGTGTC+CGG | - | chr3_4:7214519-7214538 | None:intergenic | 55.0% | |
| GGCTAGGAACCGATGTTGCA+TGG | + | chr3_4:7214531-7214550 | Msa0488020:CDS | 55.0% | |
| TGGCTCCGTCCATGCAACAT+CGG | - | chr3_4:7214543-7214562 | None:intergenic | 55.0% | |
| CTCTTCGGTTCACAGGGCCT+TGG | - | chr3_4:7209417-7209436 | None:intergenic | 60.0% | |
| !! | AGGATCCCCAGTGGTGCTAC+TGG | + | chr3_4:7211121-7211140 | Msa0488020:CDS | 60.0% |
| AGGCCGGTCAATGGAGCCTA+TGG | - | chr3_4:7212836-7212855 | None:intergenic | 60.0% | |
| GAACAGGCTAGGCCGGTCAA+TGG | - | chr3_4:7212845-7212864 | None:intergenic | 60.0% | |
| TCCGGACACTTAGGAGGGCT+AGG | + | chr3_4:7214515-7214534 | Msa0488020:CDS | 60.0% | |
| !! | AGCGCAAGAGGTTGGTGCGC+AGG | - | chr3_4:7214272-7214291 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 7207732 | 7215146 | 7207732 | ID=Msa0488020;Name=Msa0488020 |
| chr3_4 | mRNA | 7207732 | 7215146 | 7207732 | ID=Msa0488020-mRNA-1;Parent=Msa0488020;Name=Msa0488020-mRNA-1;_AED=0.04;_eAED=0.04;_QI=56|1|1|1|0.77|0.8|10|235|382 |
| chr3_4 | exon | 7207732 | 7207891 | 7207732 | ID=Msa0488020-mRNA-1:exon:2558;Parent=Msa0488020-mRNA-1 |
| chr3_4 | exon | 7208907 | 7209045 | 7208907 | ID=Msa0488020-mRNA-1:exon:2559;Parent=Msa0488020-mRNA-1 |
| chr3_4 | exon | 7210844 | 7210988 | 7210844 | ID=Msa0488020-mRNA-1:exon:2560;Parent=Msa0488020-mRNA-1 |
| chr3_4 | exon | 7211077 | 7211204 | 7211077 | ID=Msa0488020-mRNA-1:exon:2561;Parent=Msa0488020-mRNA-1 |
| chr3_4 | exon | 7211963 | 7212034 | 7211963 | ID=Msa0488020-mRNA-1:exon:2562;Parent=Msa0488020-mRNA-1 |
| chr3_4 | exon | 7213000 | 7213129 | 7213000 | ID=Msa0488020-mRNA-1:exon:2563;Parent=Msa0488020-mRNA-1 |
| chr3_4 | exon | 7213223 | 7213329 | 7213223 | ID=Msa0488020-mRNA-1:exon:2564;Parent=Msa0488020-mRNA-1 |
| chr3_4 | exon | 7213529 | 7213570 | 7213529 | ID=Msa0488020-mRNA-1:exon:2565;Parent=Msa0488020-mRNA-1 |
| chr3_4 | exon | 7214446 | 7214658 | 7214446 | ID=Msa0488020-mRNA-1:exon:2566;Parent=Msa0488020-mRNA-1 |
| chr3_4 | exon | 7214843 | 7215146 | 7214843 | ID=Msa0488020-mRNA-1:exon:2567;Parent=Msa0488020-mRNA-1 |
| chr3_4 | five_prime_UTR | 7207732 | 7207787 | 7207732 | ID=Msa0488020-mRNA-1:five_prime_utr;Parent=Msa0488020-mRNA-1 |
| chr3_4 | CDS | 7207788 | 7207891 | 7207788 | ID=Msa0488020-mRNA-1:cds;Parent=Msa0488020-mRNA-1 |
| chr3_4 | CDS | 7208907 | 7209045 | 7208907 | ID=Msa0488020-mRNA-1:cds;Parent=Msa0488020-mRNA-1 |
| chr3_4 | CDS | 7210844 | 7210988 | 7210844 | ID=Msa0488020-mRNA-1:cds;Parent=Msa0488020-mRNA-1 |
| chr3_4 | CDS | 7211077 | 7211204 | 7211077 | ID=Msa0488020-mRNA-1:cds;Parent=Msa0488020-mRNA-1 |
| chr3_4 | CDS | 7211963 | 7212034 | 7211963 | ID=Msa0488020-mRNA-1:cds;Parent=Msa0488020-mRNA-1 |
| chr3_4 | CDS | 7213000 | 7213129 | 7213000 | ID=Msa0488020-mRNA-1:cds;Parent=Msa0488020-mRNA-1 |
| chr3_4 | CDS | 7213223 | 7213329 | 7213223 | ID=Msa0488020-mRNA-1:cds;Parent=Msa0488020-mRNA-1 |
| chr3_4 | CDS | 7213529 | 7213570 | 7213529 | ID=Msa0488020-mRNA-1:cds;Parent=Msa0488020-mRNA-1 |
| chr3_4 | CDS | 7214446 | 7214658 | 7214446 | ID=Msa0488020-mRNA-1:cds;Parent=Msa0488020-mRNA-1 |
| chr3_4 | CDS | 7214843 | 7214911 | 7214843 | ID=Msa0488020-mRNA-1:cds;Parent=Msa0488020-mRNA-1 |
| chr3_4 | three_prime_UTR | 7214912 | 7215146 | 7214912 | ID=Msa0488020-mRNA-1:three_prime_utr;Parent=Msa0488020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
