Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0541360 | PNX78693.1 | 86.087 | 115 | 12 | 1 | 67 | 177 | 202 | 316 | 1.68e-36 | 139 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0541360 | A0A2K3LVJ8 | 86.087 | 115 | 12 | 1 | 67 | 177 | 202 | 316 | 8.03e-37 | 139 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003640 | Msa0541360 | 0.807452 | 5.019715e-50 | -8.615850e-47 |
| Msa0007440 | Msa0541360 | 0.800108 | 1.682142e-48 | -8.615850e-47 |
| Msa0011960 | Msa0541360 | 0.809270 | 2.055496e-50 | -8.615850e-47 |
| Msa0013050 | Msa0541360 | -0.811574 | 6.541888e-51 | -8.615850e-47 |
| Msa0027260 | Msa0541360 | 0.804353 | 2.249801e-49 | -8.615850e-47 |
| Msa0028660 | Msa0541360 | 0.814185 | 1.752380e-51 | -8.615850e-47 |
| Msa0029270 | Msa0541360 | 0.808833 | 2.550086e-50 | -8.615850e-47 |
| Msa0032090 | Msa0541360 | 0.814661 | 1.375421e-51 | -8.615850e-47 |
| Msa0032260 | Msa0541360 | 0.804980 | 1.664719e-49 | -8.615850e-47 |
| Msa0032430 | Msa0541360 | 0.807577 | 4.723363e-50 | -8.615850e-47 |
| Msa0032580 | Msa0541360 | 0.841040 | 6.045633e-58 | -8.615850e-47 |
| Msa0033110 | Msa0541360 | 0.839278 | 1.743759e-57 | -8.615850e-47 |
| Msa0033260 | Msa0541360 | 0.838088 | 3.538791e-57 | -8.615850e-47 |
| Msa0040690 | Msa0541360 | 0.817425 | 3.319843e-52 | -8.615850e-47 |
| Msa0052640 | Msa0541360 | 0.813315 | 2.723312e-51 | -8.615850e-47 |
| Msa0052770 | Msa0541360 | 0.834614 | 2.707698e-56 | -8.615850e-47 |
| Msa0054780 | Msa0541360 | 0.816631 | 5.006779e-52 | -8.615850e-47 |
| Msa0055180 | Msa0541360 | 0.810888 | 9.212357e-51 | -8.615850e-47 |
| Msa0058300 | Msa0541360 | 0.841568 | 4.390091e-58 | -8.615850e-47 |
| Msa0060770 | Msa0541360 | 0.807046 | 6.119660e-50 | -8.615850e-47 |
| Msa0067990 | Msa0541360 | 0.803084 | 4.126822e-49 | -8.615850e-47 |
| Msa0074320 | Msa0541360 | 0.807360 | 5.250471e-50 | -8.615850e-47 |
| Msa0075960 | Msa0541360 | 0.806176 | 9.342686e-50 | -8.615850e-47 |
| Msa0076320 | Msa0541360 | 0.811220 | 7.806079e-51 | -8.615850e-47 |
| Msa0079380 | Msa0541360 | 0.800657 | 1.300134e-48 | -8.615850e-47 |
| Msa0084940 | Msa0541360 | 0.802107 | 6.562712e-49 | -8.615850e-47 |
| Msa0090360 | Msa0541360 | 0.802791 | 4.743563e-49 | -8.615850e-47 |
| Msa0091410 | Msa0541360 | 0.839036 | 2.014699e-57 | -8.615850e-47 |
| Msa0094470 | Msa0541360 | 0.808260 | 3.380458e-50 | -8.615850e-47 |
| Msa0097780 | Msa0541360 | 0.823380 | 1.429009e-53 | -8.615850e-47 |
| Msa0100740 | Msa0541360 | 0.807529 | 4.834334e-50 | -8.615850e-47 |
| Msa0101710 | Msa0541360 | 0.800433 | 1.444831e-48 | -8.615850e-47 |
| Msa0113750 | Msa0541360 | 0.801384 | 9.235066e-49 | -8.615850e-47 |
| Msa0115270 | Msa0541360 | 0.804972 | 1.670827e-49 | -8.615850e-47 |
| Msa0121590 | Msa0541360 | 0.806047 | 9.941400e-50 | -8.615850e-47 |
| Msa0127050 | Msa0541360 | 0.824021 | 1.011227e-53 | -8.615850e-47 |
| Msa0129190 | Msa0541360 | -0.803308 | 3.708759e-49 | -8.615850e-47 |
| Msa0136070 | Msa0541360 | 0.827705 | 1.349506e-54 | -8.615850e-47 |
| Msa0137840 | Msa0541360 | 0.800781 | 1.226575e-48 | -8.615850e-47 |
| Msa0138630 | Msa0541360 | 0.820986 | 5.131483e-53 | -8.615850e-47 |
| Msa0140650 | Msa0541360 | 0.815997 | 6.939489e-52 | -8.615850e-47 |
| Msa0142980 | Msa0541360 | 0.806872 | 6.660529e-50 | -8.615850e-47 |
| Msa0145440 | Msa0541360 | 0.806427 | 8.269825e-50 | -8.615850e-47 |
| Msa0145730 | Msa0541360 | 0.831393 | 1.712662e-55 | -8.615850e-47 |
| Msa0150820 | Msa0541360 | 0.800677 | 1.287988e-48 | -8.615850e-47 |
| Msa0159180 | Msa0541360 | 0.813631 | 2.321266e-51 | -8.615850e-47 |
| Msa0159340 | Msa0541360 | 0.828616 | 8.141953e-55 | -8.615850e-47 |
| Msa0160550 | Msa0541360 | 0.836721 | 7.926058e-57 | -8.615850e-47 |
| Msa0165220 | Msa0541360 | 0.804253 | 2.361132e-49 | -8.615850e-47 |
| Msa0165660 | Msa0541360 | 0.808779 | 2.619406e-50 | -8.615850e-47 |
| Msa0169310 | Msa0541360 | 0.807027 | 6.178057e-50 | -8.615850e-47 |
| Msa0171540 | Msa0541360 | 0.801456 | 8.927408e-49 | -8.615850e-47 |
| Msa0172070 | Msa0541360 | 0.814361 | 1.602508e-51 | -8.615850e-47 |
| Msa0172970 | Msa0541360 | 0.839007 | 2.050091e-57 | -8.615850e-47 |
| Msa0184040 | Msa0541360 | 0.802996 | 4.302359e-49 | -8.615850e-47 |
| Msa0184780 | Msa0541360 | 0.819283 | 1.260090e-52 | -8.615850e-47 |
| Msa0187690 | Msa0541360 | 0.807145 | 5.832860e-50 | -8.615850e-47 |
| Msa0192510 | Msa0541360 | 0.805122 | 1.554981e-49 | -8.615850e-47 |
| Msa0193120 | Msa0541360 | 0.834581 | 2.759769e-56 | -8.615850e-47 |
| Msa0199880 | Msa0541360 | 0.802845 | 4.624228e-49 | -8.615850e-47 |
| Msa0208220 | Msa0541360 | 0.805503 | 1.293543e-49 | -8.615850e-47 |
| Msa0208270 | Msa0541360 | 0.802918 | 4.465877e-49 | -8.615850e-47 |
| Msa0208350 | Msa0541360 | 0.817976 | 2.493143e-52 | -8.615850e-47 |
| Msa0209350 | Msa0541360 | 0.811529 | 6.688666e-51 | -8.615850e-47 |
| Msa0220720 | Msa0541360 | 0.817010 | 4.115804e-52 | -8.615850e-47 |
| Msa0228070 | Msa0541360 | 0.811315 | 7.444237e-51 | -8.615850e-47 |
| Msa0229380 | Msa0541360 | 0.809609 | 1.738849e-50 | -8.615850e-47 |
| Msa0236270 | Msa0541360 | 0.804975 | 1.668484e-49 | -8.615850e-47 |
| Msa0366890 | Msa0541360 | 0.817725 | 2.840810e-52 | -8.615850e-47 |
| Msa0369050 | Msa0541360 | 0.822197 | 2.695147e-53 | -8.615850e-47 |
| Msa0369220 | Msa0541360 | 0.826219 | 3.058295e-54 | -8.615850e-47 |
| Msa0372340 | Msa0541360 | 0.819411 | 1.178186e-52 | -8.615850e-47 |
| Msa0383500 | Msa0541360 | 0.800894 | 1.163110e-48 | -8.615850e-47 |
| Msa0383800 | Msa0541360 | 0.828262 | 9.912365e-55 | -8.615850e-47 |
| Msa0385580 | Msa0541360 | 0.838687 | 2.480590e-57 | -8.615850e-47 |
| Msa0387750 | Msa0541360 | 0.813008 | 3.180269e-51 | -8.615850e-47 |
| Msa0398950 | Msa0541360 | 0.810151 | 1.329390e-50 | -8.615850e-47 |
| Msa0402650 | Msa0541360 | 0.810246 | 1.268078e-50 | -8.615850e-47 |
| Msa0402790 | Msa0541360 | 0.808078 | 3.694883e-50 | -8.615850e-47 |
| Msa0432770 | Msa0541360 | 0.811713 | 6.099804e-51 | -8.615850e-47 |
| Msa0441130 | Msa0541360 | 0.810845 | 9.412257e-51 | -8.615850e-47 |
| Msa0442190 | Msa0541360 | 0.829059 | 6.363135e-55 | -8.615850e-47 |
| Msa0458060 | Msa0541360 | 0.805961 | 1.036704e-49 | -8.615850e-47 |
| Msa0471440 | Msa0541360 | 0.801154 | 1.029603e-48 | -8.615850e-47 |
| Msa0471590 | Msa0541360 | 0.821780 | 3.365031e-53 | -8.615850e-47 |
| Msa0479970 | Msa0541360 | 0.803503 | 3.380156e-49 | -8.615850e-47 |
| Msa0481530 | Msa0541360 | 0.810251 | 1.264891e-50 | -8.615850e-47 |
| Msa0241390 | Msa0541360 | 0.819029 | 1.439438e-52 | -8.615850e-47 |
| Msa0242410 | Msa0541360 | 0.819239 | 1.288916e-52 | -8.615850e-47 |
| Msa0260680 | Msa0541360 | 0.828993 | 6.601742e-55 | -8.615850e-47 |
| Msa0262310 | Msa0541360 | 0.820483 | 6.698538e-53 | -8.615850e-47 |
| Msa0279220 | Msa0541360 | 0.800558 | 1.362412e-48 | -8.615850e-47 |
| Msa0279240 | Msa0541360 | 0.824799 | 6.635691e-54 | -8.615850e-47 |
| Msa0280090 | Msa0541360 | 0.802321 | 5.930356e-49 | -8.615850e-47 |
| Msa0298700 | Msa0541360 | 0.812299 | 4.545341e-51 | -8.615850e-47 |
| Msa0299870 | Msa0541360 | 0.820412 | 6.954558e-53 | -8.615850e-47 |
| Msa0306710 | Msa0541360 | 0.825019 | 5.888104e-54 | -8.615850e-47 |
| Msa0309770 | Msa0541360 | 0.836747 | 7.804927e-57 | -8.615850e-47 |
| Msa0318980 | Msa0541360 | 0.832290 | 1.028758e-55 | -8.615850e-47 |
| Msa0333030 | Msa0541360 | 0.812267 | 4.620430e-51 | -8.615850e-47 |
| Msa0337240 | Msa0541360 | 0.829004 | 6.560011e-55 | -8.615850e-47 |
| Msa0337650 | Msa0541360 | 0.803255 | 3.803068e-49 | -8.615850e-47 |
| Msa0340380 | Msa0541360 | 0.808306 | 3.304449e-50 | -8.615850e-47 |
| Msa0345350 | Msa0541360 | 0.807256 | 5.524350e-50 | -8.615850e-47 |
| Msa0488020 | Msa0541360 | 0.803303 | 3.717731e-49 | -8.615850e-47 |
| Msa0493410 | Msa0541360 | 0.800621 | 1.322426e-48 | -8.615850e-47 |
| Msa0502880 | Msa0541360 | 0.842539 | 2.430623e-58 | -8.615850e-47 |
| Msa0504020 | Msa0541360 | 0.814137 | 1.795806e-51 | -8.615850e-47 |
| Msa0508590 | Msa0541360 | 0.828545 | 8.472687e-55 | -8.615850e-47 |
| Msa0508630 | Msa0541360 | 0.816959 | 4.226234e-52 | -8.615850e-47 |
| Msa0508870 | Msa0541360 | 0.818689 | 1.719063e-52 | -8.615850e-47 |
| Msa0510350 | Msa0541360 | 0.837706 | 4.436282e-57 | -8.615850e-47 |
| Msa0521500 | Msa0541360 | 0.808332 | 3.262586e-50 | -8.615850e-47 |
| Msa0529890 | Msa0541360 | 0.807511 | 4.877922e-50 | -8.615850e-47 |
| Msa0541360 | Msa0541410 | 0.933543 | 1.598529e-95 | -8.615850e-47 |
| Msa0541360 | Msa0547360 | 0.807999 | 3.840745e-50 | -8.615850e-47 |
| Msa0541360 | Msa0548240 | 0.803425 | 3.507146e-49 | -8.615850e-47 |
| Msa0541360 | Msa0555450 | 0.814587 | 1.427766e-51 | -8.615850e-47 |
| Msa0541360 | Msa0556060 | 0.815342 | 9.711763e-52 | -8.615850e-47 |
| Msa0541360 | Msa0585560 | 0.809924 | 1.488017e-50 | -8.615850e-47 |
| Msa0541360 | Msa0596800 | 0.803183 | 3.936043e-49 | -8.615850e-47 |
| Msa0541360 | Msa0598720 | 0.812618 | 3.872013e-51 | -8.615850e-47 |
| Msa0541360 | Msa0598810 | 0.807054 | 6.097449e-50 | -8.615850e-47 |
| Msa0541360 | Msa0602390 | 0.809515 | 1.821541e-50 | -8.615850e-47 |
| Msa0541360 | Msa0607050 | 0.800016 | 1.756560e-48 | -8.615850e-47 |
| Msa0541360 | Msa0608320 | 0.813893 | 2.032324e-51 | -8.615850e-47 |
| Msa0541360 | Msa0610430 | 0.825355 | 4.905361e-54 | -8.615850e-47 |
| Msa0541360 | Msa0615440 | 0.806142 | 9.495975e-50 | -8.615850e-47 |
| Msa0541360 | Msa0615490 | 0.809063 | 2.276582e-50 | -8.615850e-47 |
| Msa0541360 | Msa0615710 | 0.809364 | 1.963045e-50 | -8.615850e-47 |
| Msa0541360 | Msa0616240 | 0.808153 | 3.561916e-50 | -8.615850e-47 |
| Msa0541360 | Msa0617640 | 0.806645 | 7.438416e-50 | -8.615850e-47 |
| Msa0541360 | Msa0621490 | 0.830051 | 3.650994e-55 | -8.615850e-47 |
| Msa0541360 | Msa0623790 | 0.854055 | 1.587378e-61 | -8.615850e-47 |
| Msa0541360 | Msa0625720 | 0.807038 | 6.144714e-50 | -8.615850e-47 |
| Msa0541360 | Msa0632870 | 0.807105 | 5.946873e-50 | -8.615850e-47 |
| Msa0541360 | Msa0636070 | 0.953972 | 8.397039e-112 | -8.615850e-47 |
| Msa0541360 | Msa0641670 | 0.827751 | 1.315862e-54 | -8.615850e-47 |
| Msa0541360 | Msa0643560 | 0.863875 | 1.821598e-64 | -8.615850e-47 |
| Msa0541360 | Msa0647500 | 0.817653 | 2.950207e-52 | -8.615850e-47 |
| Msa0541360 | Msa0661190 | -0.812716 | 3.686491e-51 | -8.615850e-47 |
| Msa0541360 | Msa0663390 | 0.820699 | 5.976482e-53 | -8.615850e-47 |
| Msa0541360 | Msa0675410 | 0.962642 | 4.030495e-121 | -8.615850e-47 |
| Msa0541360 | Msa0682900 | 0.801196 | 1.009342e-48 | -8.615850e-47 |
| Msa0541360 | Msa0688390 | 0.818722 | 1.689723e-52 | -8.615850e-47 |
| Msa0541360 | Msa0688960 | 0.962058 | 1.994630e-120 | -8.615850e-47 |
| Msa0541360 | Msa0691900 | 0.817267 | 3.603805e-52 | -8.615850e-47 |
| Msa0541360 | Msa0692830 | 0.827078 | 1.907556e-54 | -8.615850e-47 |
| Msa0541360 | Msa0692950 | 0.830434 | 2.943440e-55 | -8.615850e-47 |
| Msa0541360 | Msa0698490 | 0.811417 | 7.074481e-51 | -8.615850e-47 |
| Msa0541360 | Msa0698540 | 0.837983 | 3.766206e-57 | -8.615850e-47 |
| Msa0541360 | Msa0698660 | 0.812814 | 3.507366e-51 | -8.615850e-47 |
| Msa0541360 | Msa0699570 | 0.807700 | 4.446551e-50 | -8.615850e-47 |
| Msa0541360 | Msa0701920 | 0.811932 | 5.466505e-51 | -8.615850e-47 |
| Msa0541360 | Msa0709500 | 0.800618 | 1.324454e-48 | -8.615850e-47 |
| Msa0541360 | Msa0711780 | 0.813800 | 2.130640e-51 | -8.615850e-47 |
| Msa0541360 | Msa0716840 | 0.828510 | 8.636884e-55 | -8.615850e-47 |
| Msa0541360 | Msa0737600 | 0.806041 | 9.970905e-50 | -8.615850e-47 |
| Msa0541360 | Msa0784860 | 0.803914 | 2.776544e-49 | -8.615850e-47 |
| Msa0541360 | Msa0788850 | 0.820411 | 6.956013e-53 | -8.615850e-47 |
| Msa0541360 | Msa0794670 | 0.818671 | 1.735409e-52 | -8.615850e-47 |
| Msa0541360 | Msa0796530 | 0.801954 | 7.054658e-49 | -8.615850e-47 |
| Msa0541360 | Msa0796700 | 0.801950 | 7.068862e-49 | -8.615850e-47 |
| Msa0541360 | Msa0808080 | 0.816585 | 5.126732e-52 | -8.615850e-47 |
| Msa0541360 | Msa0808270 | 0.837396 | 5.329069e-57 | -8.615850e-47 |
| Msa0541360 | Msa0813720 | 0.819446 | 1.156422e-52 | -8.615850e-47 |
| Msa0541360 | Msa0824680 | 0.806312 | 8.743157e-50 | -8.615850e-47 |
| Msa0541360 | Msa0830540 | 0.800629 | 1.317375e-48 | -8.615850e-47 |
| Msa0541360 | Msa0847770 | 0.822251 | 2.618438e-53 | -8.615850e-47 |
| Msa0541360 | Msa0849030 | 0.813239 | 2.830075e-51 | -8.615850e-47 |
| Msa0541360 | Msa0864250 | 0.800144 | 1.654041e-48 | -8.615850e-47 |
| Msa0541360 | Msa0871270 | 0.806693 | 7.268560e-50 | -8.615850e-47 |
| Msa0541360 | Msa0878500 | 0.829688 | 4.474660e-55 | -8.615850e-47 |
| Msa0541360 | Msa0900110 | 0.808244 | 3.406938e-50 | -8.615850e-47 |
| Msa0541360 | Msa0926850 | 0.812378 | 4.369151e-51 | -8.615850e-47 |
| Msa0541360 | Msa0927260 | 0.824005 | 1.020183e-53 | -8.615850e-47 |
| Msa0541360 | Msa0938220 | 0.803219 | 3.870652e-49 | -8.615850e-47 |
| Msa0541360 | Msa0944190 | 0.851005 | 1.176340e-60 | -8.615850e-47 |
| Msa0541360 | Msa0945970 | 0.842593 | 2.352383e-58 | -8.615850e-47 |
| Msa0541360 | Msa0947660 | 0.814198 | 1.741103e-51 | -8.615850e-47 |
| Msa0541360 | Msa0949590 | 0.803701 | 3.074534e-49 | -8.615850e-47 |
| Msa0541360 | Msa0969810 | 0.816539 | 5.249018e-52 | -8.615850e-47 |
| Msa0541360 | Msa0981060 | 0.820374 | 7.094955e-53 | -8.615850e-47 |
| Msa0541360 | Msa0999430 | 0.807336 | 5.312514e-50 | -8.615850e-47 |
| Msa0541360 | Msa0999970 | 0.845829 | 3.181449e-59 | -8.615850e-47 |
| Msa0541360 | Msa1003620 | 0.804578 | 2.019364e-49 | -8.615850e-47 |
| Msa0541360 | Msa1011680 | 0.815727 | 7.972605e-52 | -8.615850e-47 |
| Msa0541360 | Msa1012830 | 0.827621 | 1.413601e-54 | -8.615850e-47 |
| Msa0541360 | Msa1030620 | 0.824315 | 8.628488e-54 | -8.615850e-47 |
| Msa0541360 | Msa1037420 | 0.857447 | 1.622626e-62 | -8.615850e-47 |
| Msa0541360 | Msa1046020 | 0.832719 | 8.052385e-56 | -8.615850e-47 |
| Msa0541360 | Msa1046060 | 0.837490 | 5.041748e-57 | -8.615850e-47 |
| Msa0541360 | Msa1046460 | 0.806103 | 9.678367e-50 | -8.615850e-47 |
| Msa0541360 | Msa1051200 | 0.822987 | 1.765166e-53 | -8.615850e-47 |
| Msa0541360 | Msa1080290 | 0.810220 | 1.284535e-50 | -8.615850e-47 |
| Msa0541360 | Msa1081150 | 0.801867 | 7.352961e-49 | -8.615850e-47 |
| Msa0541360 | Msa1084470 | 0.809384 | 1.943243e-50 | -8.615850e-47 |
| Msa0541360 | Msa1087710 | 0.812151 | 4.896767e-51 | -8.615850e-47 |
| Msa0541360 | Msa1091100 | 0.819540 | 1.100822e-52 | -8.615850e-47 |
| Msa0541360 | Msa1104140 | 0.814820 | 1.268142e-51 | -8.615850e-47 |
| Msa0541360 | Msa1104210 | 0.804348 | 2.255276e-49 | -8.615850e-47 |
| Msa0541360 | Msa1106700 | 0.822669 | 2.093199e-53 | -8.615850e-47 |
| Msa0541360 | Msa1121440 | 0.811181 | 7.962023e-51 | -8.615850e-47 |
| Msa0541360 | Msa1123810 | 0.862453 | 5.015912e-64 | -8.615850e-47 |
| Msa0541360 | Msa1128060 | 0.810371 | 1.191862e-50 | -8.615850e-47 |
| Msa0541360 | Msa1134090 | 0.817983 | 2.484465e-52 | -8.615850e-47 |
| Msa0541360 | Msa1136540 | 0.805035 | 1.621155e-49 | -8.615850e-47 |
| Msa0541360 | Msa1137700 | 0.818079 | 2.363243e-52 | -8.615850e-47 |
| Msa0541360 | Msa1147280 | 0.800519 | 1.387548e-48 | -8.615850e-47 |
| Msa0541360 | Msa1167340 | 0.803651 | 3.148211e-49 | -8.615850e-47 |
| Msa0541360 | Msa1171360 | 0.800010 | 1.761258e-48 | -8.615850e-47 |
| Msa0541360 | Msa1171870 | 0.814036 | 1.889929e-51 | -8.615850e-47 |
| Msa0541360 | Msa1173140 | 0.831241 | 1.866248e-55 | -8.615850e-47 |
| Msa0541360 | Msa1190930 | 0.806279 | 8.885316e-50 | -8.615850e-47 |
| Msa0541360 | Msa1199990 | 0.806112 | 9.634068e-50 | -8.615850e-47 |
| Msa0541360 | Msa1203250 | 0.810699 | 1.012378e-50 | -8.615850e-47 |
| Msa0541360 | Msa1206670 | 0.805113 | 1.561129e-49 | -8.615850e-47 |
| Msa0541360 | Msa1208880 | 0.809095 | 2.241287e-50 | -8.615850e-47 |
| Msa0541360 | Msa1210020 | 0.820296 | 7.394145e-53 | -8.615850e-47 |
| Msa0541360 | Msa1211890 | 0.809053 | 2.288702e-50 | -8.615850e-47 |
| Msa0541360 | Msa1225700 | 0.805669 | 1.193645e-49 | -8.615850e-47 |
| Msa0541360 | Msa1231840 | 0.810623 | 1.051427e-50 | -8.615850e-47 |
| Msa0541360 | Msa1247250 | 0.802304 | 5.976995e-49 | -8.615850e-47 |
| Msa0541360 | Msa1253020 | 0.808458 | 3.066985e-50 | -8.615850e-47 |
| Msa0541360 | Msa1254730 | 0.804602 | 1.996145e-49 | -8.615850e-47 |
| Msa0541360 | Msa1275360 | 0.825520 | 4.481419e-54 | -8.615850e-47 |
| Msa0541360 | Msa1279400 | 0.800989 | 1.112535e-48 | -8.615850e-47 |
| Msa0541360 | Msa1287460 | 0.821120 | 4.780373e-53 | -8.615850e-47 |
| Msa0541360 | Msa1291890 | 0.808328 | 3.268658e-50 | -8.615850e-47 |
| Msa0541360 | Msa1294820 | 0.807141 | 5.843856e-50 | -8.615850e-47 |
| Msa0541360 | Msa1298510 | 0.804078 | 2.566566e-49 | -8.615850e-47 |
| Msa0541360 | Msa1302640 | 0.802213 | 6.241978e-49 | -8.615850e-47 |
| Msa0541360 | Msa1306430 | 0.810014 | 1.423003e-50 | -8.615850e-47 |
| Msa0541360 | Msa1306560 | 0.820252 | 7.566978e-53 | -8.615850e-47 |
| Msa0541360 | Msa1306860 | 0.808627 | 2.822220e-50 | -8.615850e-47 |
| Msa0541360 | Msa1340470 | 0.804699 | 1.905547e-49 | -8.615850e-47 |
| Msa0541360 | Msa1353330 | 0.819124 | 1.369643e-52 | -8.615850e-47 |
| Msa0541360 | Msa1361520 | 0.829910 | 3.951940e-55 | -8.615850e-47 |
| Msa0541360 | Msa1368120 | 0.800327 | 1.518003e-48 | -8.615850e-47 |
| Msa0541360 | Msa1374120 | 0.805264 | 1.451707e-49 | -8.615850e-47 |
| Msa0541360 | Msa1375380 | 0.828928 | 6.844526e-55 | -8.615850e-47 |
| Msa0541360 | Msa1385770 | 0.880737 | 4.290950e-70 | -8.615850e-47 |
| Msa0541360 | Msa1386780 | 0.824595 | 7.412023e-54 | -8.615850e-47 |
| Msa0541360 | Msa1389800 | 0.805511 | 1.288714e-49 | -8.615850e-47 |
| Msa0541360 | Msa1391410 | 0.828756 | 7.534225e-55 | -8.615850e-47 |
| Msa0541360 | Msa1394290 | 0.827985 | 1.156091e-54 | -8.615850e-47 |
| Msa0541360 | Msa1394500 | 0.801387 | 9.221106e-49 | -8.615850e-47 |
| Msa0541360 | Msa1400580 | 0.802133 | 6.484283e-49 | -8.615850e-47 |
| Msa0541360 | Msa1409240 | 0.879482 | 1.201645e-69 | -8.615850e-47 |
| Msa0541360 | Msa1415640 | 0.809268 | 2.057599e-50 | -8.615850e-47 |
| Msa0541360 | Msa1416150 | 0.803589 | 3.243363e-49 | -8.615850e-47 |
| Msa0541360 | Msa1419800 | -0.813911 | 2.014111e-51 | -8.615850e-47 |
| Msa0541360 | Msa1420990 | 0.818059 | 2.388102e-52 | -8.615850e-47 |
| Msa0541360 | Msa1426030 | 0.828847 | 7.158420e-55 | -8.615850e-47 |
| Msa0541360 | Msa1432420 | 0.840687 | 7.481626e-58 | -8.615850e-47 |
| Msa0541360 | Msa1433390 | 0.807186 | 5.716401e-50 | -8.615850e-47 |
| Msa0541360 | Msa1434140 | 0.876600 | 1.227050e-68 | -8.615850e-47 |
| Msa0541360 | Msa1439550 | 0.803570 | 3.273515e-49 | -8.615850e-47 |
| Msa0541360 | Msa1443850 | 0.806290 | 8.840111e-50 | -8.615850e-47 |
| Msa0541360 | Msa1444310 | 0.811359 | 7.283099e-51 | -8.615850e-47 |
| Msa0541360 | Msa1453780 | -0.804971 | 1.671540e-49 | -8.615850e-47 |
| Msa0541360 | Msa1454480 | 0.829067 | 6.334208e-55 | -8.615850e-47 |
| Msa0541360 | Msa1457920 | 0.818893 | 1.545152e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0541360 | MtrunA17_Chr4g0018731 | 66.667 | 177 | 42 | 5 | 1 | 165 | 1 | 172 | 2.61e-40 | 134 |
| Msa0541360 | MtrunA17_Chr1g0168301 | 81.897 | 116 | 17 | 1 | 66 | 177 | 210 | 325 | 5.07e-19 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 43 sgRNAs with CRISPR-Local
Find 43 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGAGTGTTTAAGACTAAC+AGG | 0.286414 | 4_1:+25179381 | Msa0541360:CDS |
| ATCATCAACTGACAGTGATT+CGG | 0.382705 | 4_1:+25179619 | Msa0541360:CDS |
| AAAGGAGGAGGAGGGAGCAC+AGG | 0.386258 | 4_1:+25179432 | Msa0541360:CDS |
| TCATCAACTGACAGTGATTC+GGG | 0.386672 | 4_1:+25179620 | Msa0541360:CDS |
| GATTCGGGTGATGGATATAA+TGG | 0.404972 | 4_1:+25179635 | Msa0541360:CDS |
| ACCATGGAGATGATGATTAG+AGG | 0.412561 | 4_1:+25179708 | Msa0541360:CDS |
| TGGATATAATGGTTCAAGTA+AGG | 0.433386 | 4_1:+25179646 | Msa0541360:CDS |
| CTATATTCATCACTATCATC+TGG | 0.440092 | 4_1:-25179476 | None:intergenic |
| GAGAGGTTCTTATAGAAAGA+AGG | 0.453802 | 4_1:+25179288 | Msa0541360:intron |
| TTGAGAGAGCTATTGCTAAA+GGG | 0.463888 | 4_1:+25179250 | Msa0541360:CDS |
| GCTAGTGATTCAGATGGTTC+CGG | 0.468678 | 4_1:+25179407 | Msa0541360:CDS |
| ACTGACAGTGATTCGGGTGA+TGG | 0.486358 | 4_1:+25179626 | Msa0541360:CDS |
| CTCCCTCCTCCTCCTTTCAC+CGG | 0.487250 | 4_1:-25179426 | None:intergenic |
| GTAGGAAAGAGAAGAGGAGA+AGG | 0.494224 | 4_1:+25179516 | Msa0541360:CDS |
| ACAAAGATGCTGACCGAAAG+AGG | 0.498522 | 4_1:+25179335 | Msa0541360:CDS |
| ATTCAGATGGTTCCGGTGAA+AGG | 0.502557 | 4_1:+25179414 | Msa0541360:CDS |
| GAGCTCAGAAGAGGAGGAAG+AGG | 0.513498 | 4_1:+25179191 | Msa0541360:CDS |
| ATTGAGAGAGCTATTGCTAA+AGG | 0.513599 | 4_1:+25179249 | Msa0541360:CDS |
| TCCTCTAATCATCATCTCCA+TGG | 0.523954 | 4_1:-25179709 | None:intergenic |
| GTTCCGGTGAAAGGAGGAGG+AGG | 0.525308 | 4_1:+25179423 | Msa0541360:CDS |
| ATGAATATAGACACAAGAAA+AGG | 0.532593 | 4_1:+25179489 | Msa0541360:CDS |
| GGATATAATGGTTCAAGTAA+GGG | 0.549938 | 4_1:+25179647 | Msa0541360:CDS |
| ATGGTTCCGGTGAAAGGAGG+AGG | 0.558346 | 4_1:+25179420 | Msa0541360:CDS |
| TAATGGTTCAAGTAAGGGTA+GGG | 0.560844 | 4_1:+25179652 | Msa0541360:CDS |
| TGTTGAGAGCTCAGAAGAGG+AGG | 0.561377 | 4_1:+25179185 | Msa0541360:CDS |
| GACACAAGAAAAGGAAGAGT+AGG | 0.567421 | 4_1:+25179498 | Msa0541360:CDS |
| TTCTGATTCTGAAACATCTG+AGG | 0.573778 | 4_1:+25179556 | Msa0541360:CDS |
| GGGGAAGTTAGTGAGAAGAG+AGG | 0.575217 | 4_1:+25179271 | Msa0541360:CDS |
| AGAGAGGTAGAGAAAAGAGA+AGG | 0.579127 | 4_1:+25179362 | Msa0541360:CDS |
| ATAATGGTTCAAGTAAGGGT+AGG | 0.582111 | 4_1:+25179651 | Msa0541360:CDS |
| TGAGAGAGCTATTGCTAAAG+GGG | 0.588008 | 4_1:+25179251 | Msa0541360:CDS |
| GGAAGAGTAGGAAAGAGAAG+AGG | 0.590104 | 4_1:+25179510 | Msa0541360:CDS |
| GGGAGCACAGGAGAAGCATG+AGG | 0.590249 | 4_1:+25179444 | Msa0541360:CDS |
| CAATGTTGAGAGCTCAGAAG+AGG | 0.592360 | 4_1:+25179182 | None:intergenic |
| AAGAGGAGGAGACGCCACCA+TGG | 0.594257 | 4_1:+25179692 | Msa0541360:CDS |
| CAGATGGTTCCGGTGAAAGG+AGG | 0.617536 | 4_1:+25179417 | Msa0541360:CDS |
| CATCTGAGGATTCTACTTCG+CGG | 0.617958 | 4_1:+25179570 | Msa0541360:CDS |
| AGGGAAGCTAGTGATTCAGA+TGG | 0.649064 | 4_1:+25179401 | Msa0541360:CDS |
| GGAGCACAGGAGAAGCATGA+GGG | 0.656858 | 4_1:+25179445 | Msa0541360:CDS |
| TTCCGGTGAAAGGAGGAGGA+GGG | 0.666380 | 4_1:+25179424 | Msa0541360:CDS |
| AGGAGTGTTTAAGACTAACA+GGG | 0.683554 | 4_1:+25179382 | Msa0541360:CDS |
| TCTAATCATCATCTCCATGG+TGG | 0.691101 | 4_1:-25179706 | None:intergenic |
| GAGAGAGCTATTGCTAAAGG+GGG | 0.696345 | 4_1:+25179252 | Msa0541360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATCAAAAAATCAGAAAAG+AGG | + | chr4_1:25179675-25179694 | Msa0541360:CDS | 20.0% |
| ! | ATGAATATAGACACAAGAAA+AGG | + | chr4_1:25179489-25179508 | Msa0541360:CDS | 25.0% |
| CTATATTCATCACTATCATC+TGG | - | chr4_1:25179479-25179498 | None:intergenic | 30.0% | |
| TGGATATAATGGTTCAAGTA+AGG | + | chr4_1:25179646-25179665 | Msa0541360:CDS | 30.0% | |
| GGATATAATGGTTCAAGTAA+GGG | + | chr4_1:25179647-25179666 | Msa0541360:CDS | 30.0% | |
| TCAAAAAATCAGAAAAGAGG+AGG | + | chr4_1:25179678-25179697 | Msa0541360:CDS | 30.0% | |
| ATTGAGAGAGCTATTGCTAA+AGG | + | chr4_1:25179249-25179268 | Msa0541360:CDS | 35.0% | |
| TTGAGAGAGCTATTGCTAAA+GGG | + | chr4_1:25179250-25179269 | Msa0541360:CDS | 35.0% | |
| GAGAGGTTCTTATAGAAAGA+AGG | + | chr4_1:25179288-25179307 | Msa0541360:intron | 35.0% | |
| ! | TACCTCTCTTTTTCCTCTTT+CGG | - | chr4_1:25179351-25179370 | None:intergenic | 35.0% |
| !! | AAGGAGTGTTTAAGACTAAC+AGG | + | chr4_1:25179381-25179400 | Msa0541360:CDS | 35.0% |
| !! | AGGAGTGTTTAAGACTAACA+GGG | + | chr4_1:25179382-25179401 | Msa0541360:CDS | 35.0% |
| !! | TTCTGATTCTGAAACATCTG+AGG | + | chr4_1:25179556-25179575 | Msa0541360:CDS | 35.0% |
| ATCATCAACTGACAGTGATT+CGG | + | chr4_1:25179619-25179638 | Msa0541360:CDS | 35.0% | |
| ATAATGGTTCAAGTAAGGGT+AGG | + | chr4_1:25179651-25179670 | Msa0541360:CDS | 35.0% | |
| TAATGGTTCAAGTAAGGGTA+GGG | + | chr4_1:25179652-25179671 | Msa0541360:CDS | 35.0% | |
| TGAGAGAGCTATTGCTAAAG+GGG | + | chr4_1:25179251-25179270 | Msa0541360:CDS | 40.0% | |
| AGAGAGGTAGAGAAAAGAGA+AGG | + | chr4_1:25179362-25179381 | Msa0541360:CDS | 40.0% | |
| GACACAAGAAAAGGAAGAGT+AGG | + | chr4_1:25179498-25179517 | Msa0541360:CDS | 40.0% | |
| TCATCAACTGACAGTGATTC+GGG | + | chr4_1:25179620-25179639 | Msa0541360:CDS | 40.0% | |
| !! | GATTCGGGTGATGGATATAA+TGG | + | chr4_1:25179635-25179654 | Msa0541360:CDS | 40.0% |
| GAGAGAGCTATTGCTAAAGG+GGG | + | chr4_1:25179252-25179271 | Msa0541360:CDS | 45.0% | |
| ACAAAGATGCTGACCGAAAG+AGG | + | chr4_1:25179335-25179354 | Msa0541360:CDS | 45.0% | |
| GACCGAAAGAGGAAAAAGAG+AGG | + | chr4_1:25179346-25179365 | Msa0541360:CDS | 45.0% | |
| AGGGAAGCTAGTGATTCAGA+TGG | + | chr4_1:25179401-25179420 | Msa0541360:CDS | 45.0% | |
| GCTAGTGATTCAGATGGTTC+CGG | + | chr4_1:25179407-25179426 | Msa0541360:CDS | 45.0% | |
| ATTCAGATGGTTCCGGTGAA+AGG | + | chr4_1:25179414-25179433 | Msa0541360:CDS | 45.0% | |
| GGAAGAGTAGGAAAGAGAAG+AGG | + | chr4_1:25179510-25179529 | Msa0541360:CDS | 45.0% | |
| GTAGGAAAGAGAAGAGGAGA+AGG | + | chr4_1:25179516-25179535 | Msa0541360:CDS | 45.0% | |
| CATCTGAGGATTCTACTTCG+CGG | + | chr4_1:25179570-25179589 | Msa0541360:CDS | 45.0% | |
| TGTTGAGAGCTCAGAAGAGG+AGG | + | chr4_1:25179185-25179204 | Msa0541360:CDS | 50.0% | |
| GGGGAAGTTAGTGAGAAGAG+AGG | + | chr4_1:25179271-25179290 | Msa0541360:CDS | 50.0% | |
| ! | ACTGACAGTGATTCGGGTGA+TGG | + | chr4_1:25179626-25179645 | Msa0541360:CDS | 50.0% |
| GAGCTCAGAAGAGGAGGAAG+AGG | + | chr4_1:25179191-25179210 | Msa0541360:CDS | 55.0% | |
| CAGATGGTTCCGGTGAAAGG+AGG | + | chr4_1:25179417-25179436 | Msa0541360:CDS | 55.0% | |
| ATGGTTCCGGTGAAAGGAGG+AGG | + | chr4_1:25179420-25179439 | Msa0541360:CDS | 55.0% | |
| TTCCGGTGAAAGGAGGAGGA+GGG | + | chr4_1:25179424-25179443 | Msa0541360:CDS | 55.0% | |
| ! | GGAGCACAGGAGAAGCATGA+GGG | + | chr4_1:25179445-25179464 | Msa0541360:CDS | 55.0% |
| GTTCCGGTGAAAGGAGGAGG+AGG | + | chr4_1:25179423-25179442 | Msa0541360:CDS | 60.0% | |
| CTCCCTCCTCCTCCTTTCAC+CGG | - | chr4_1:25179429-25179448 | None:intergenic | 60.0% | |
| ! | AAAGGAGGAGGAGGGAGCAC+AGG | + | chr4_1:25179432-25179451 | Msa0541360:CDS | 60.0% |
| ! | GGGAGCACAGGAGAAGCATG+AGG | + | chr4_1:25179444-25179463 | Msa0541360:CDS | 60.0% |
| AAGAGGAGGAGACGCCACCA+TGG | + | chr4_1:25179692-25179711 | Msa0541360:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 25179184 | 25179727 | 25179184 | ID=Msa0541360;Name=Msa0541360 |
| chr4_1 | mRNA | 25179184 | 25179727 | 25179184 | ID=Msa0541360-mRNA-1;Parent=Msa0541360;Name=Msa0541360-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0|0|1|0|0|2|0|177 |
| chr4_1 | exon | 25179184 | 25179292 | 25179184 | ID=Msa0541360-mRNA-1:exon:6787;Parent=Msa0541360-mRNA-1 |
| chr4_1 | exon | 25179303 | 25179727 | 25179303 | ID=Msa0541360-mRNA-1:exon:6788;Parent=Msa0541360-mRNA-1 |
| chr4_1 | CDS | 25179184 | 25179292 | 25179184 | ID=Msa0541360-mRNA-1:cds;Parent=Msa0541360-mRNA-1 |
| chr4_1 | CDS | 25179303 | 25179727 | 25179303 | ID=Msa0541360-mRNA-1:cds;Parent=Msa0541360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
