Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0004980 | 0.800965 | 1.125192e-48 | -8.615850e-47 |
| Msa0004950 | Msa0004980 | 0.943054 | 2.398524e-102 | -8.615850e-47 |
| Msa0004980 | Msa0013050 | -0.814581 | 1.432573e-51 | -8.615850e-47 |
| Msa0004980 | Msa0027260 | 0.809851 | 1.542148e-50 | -8.615850e-47 |
| Msa0004980 | Msa0032260 | 0.824674 | 7.103598e-54 | -8.615850e-47 |
| Msa0004980 | Msa0032840 | -0.802044 | 6.762182e-49 | -8.615850e-47 |
| Msa0004980 | Msa0047160 | 0.810611 | 1.057479e-50 | -8.615850e-47 |
| Msa0004980 | Msa0047980 | 0.827732 | 1.329636e-54 | -8.615850e-47 |
| Msa0004980 | Msa0053030 | 0.840807 | 6.962723e-58 | -8.615850e-47 |
| Msa0004980 | Msa0055180 | 0.812059 | 5.128299e-51 | -8.615850e-47 |
| Msa0004980 | Msa0057140 | 0.806887 | 6.613955e-50 | -8.615850e-47 |
| Msa0004980 | Msa0073480 | 0.802982 | 4.332249e-49 | -8.615850e-47 |
| Msa0004980 | Msa0073670 | 0.822200 | 2.690064e-53 | -8.615850e-47 |
| Msa0004980 | Msa0074320 | 0.821675 | 3.559085e-53 | -8.615850e-47 |
| Msa0004980 | Msa0076000 | 0.809527 | 1.810991e-50 | -8.615850e-47 |
| Msa0004980 | Msa0082280 | 0.807979 | 3.880146e-50 | -8.615850e-47 |
| Msa0004980 | Msa0091570 | 0.832687 | 8.200043e-56 | -8.615850e-47 |
| Msa0004980 | Msa0094470 | 0.825957 | 3.531482e-54 | -8.615850e-47 |
| Msa0004980 | Msa0094950 | 0.820710 | 5.941442e-53 | -8.615850e-47 |
| Msa0004980 | Msa0100740 | 0.827470 | 1.536829e-54 | -8.615850e-47 |
| Msa0004980 | Msa0115390 | 0.813357 | 2.667300e-51 | -8.615850e-47 |
| Msa0004980 | Msa0121820 | 0.810011 | 1.424609e-50 | -8.615850e-47 |
| Msa0004980 | Msa0124340 | 0.801400 | 9.166095e-49 | -8.615850e-47 |
| Msa0004980 | Msa0127310 | 0.820418 | 6.931807e-53 | -8.615850e-47 |
| Msa0004980 | Msa0128860 | 0.820312 | 7.332379e-53 | -8.615850e-47 |
| Msa0004980 | Msa0145730 | 0.800550 | 1.367576e-48 | -8.615850e-47 |
| Msa0004980 | Msa0165950 | 0.839812 | 1.266964e-57 | -8.615850e-47 |
| Msa0004980 | Msa0167480 | 0.816564 | 5.181023e-52 | -8.615850e-47 |
| Msa0004980 | Msa0173820 | 0.804701 | 1.904183e-49 | -8.615850e-47 |
| Msa0004980 | Msa0174730 | 0.818027 | 2.428719e-52 | -8.615850e-47 |
| Msa0004980 | Msa0174770 | 0.809241 | 2.085992e-50 | -8.615850e-47 |
| Msa0004980 | Msa0183460 | 0.826740 | 2.298480e-54 | -8.615850e-47 |
| Msa0004980 | Msa0186890 | 0.827247 | 1.738524e-54 | -8.615850e-47 |
| Msa0004980 | Msa0187690 | 0.827363 | 1.630829e-54 | -8.615850e-47 |
| Msa0004980 | Msa0187930 | 0.830617 | 2.654566e-55 | -8.615850e-47 |
| Msa0004980 | Msa0193120 | 0.804580 | 2.017613e-49 | -8.615850e-47 |
| Msa0004980 | Msa0194480 | 0.818819 | 1.606477e-52 | -8.615850e-47 |
| Msa0004980 | Msa0194540 | 0.836704 | 8.007516e-57 | -8.615850e-47 |
| Msa0004980 | Msa0199690 | 0.842053 | 3.270528e-58 | -8.615850e-47 |
| Msa0004980 | Msa0199880 | 0.833097 | 6.486428e-56 | -8.615850e-47 |
| Msa0004980 | Msa0225180 | 0.803952 | 2.726761e-49 | -8.615850e-47 |
| Msa0004980 | Msa0226460 | 0.814679 | 1.362758e-51 | -8.615850e-47 |
| Msa0004980 | Msa0226470 | 0.802386 | 5.748902e-49 | -8.615850e-47 |
| Msa0004980 | Msa0230550 | -0.807625 | 4.614002e-50 | -8.615850e-47 |
| Msa0004980 | Msa0231880 | 0.823290 | 1.499877e-53 | -8.615850e-47 |
| Msa0004980 | Msa0236270 | 0.852054 | 5.936657e-61 | -8.615850e-47 |
| Msa0004980 | Msa0241780 | 0.813423 | 2.578715e-51 | -8.615850e-47 |
| Msa0004980 | Msa0241800 | 0.814443 | 1.536547e-51 | -8.615850e-47 |
| Msa0004980 | Msa0242230 | 0.807364 | 5.240576e-50 | -8.615850e-47 |
| Msa0004980 | Msa0242410 | 0.829558 | 4.812386e-55 | -8.615850e-47 |
| Msa0004980 | Msa0242680 | 0.804855 | 1.767884e-49 | -8.615850e-47 |
| Msa0004980 | Msa0244780 | 0.830107 | 3.537120e-55 | -8.615850e-47 |
| Msa0004980 | Msa0260240 | 0.827545 | 1.475015e-54 | -8.615850e-47 |
| Msa0004980 | Msa0260280 | 0.827183 | 1.800711e-54 | -8.615850e-47 |
| Msa0004980 | Msa0262310 | 0.834013 | 3.830460e-56 | -8.615850e-47 |
| Msa0004980 | Msa0264570 | 0.815786 | 7.733324e-52 | -8.615850e-47 |
| Msa0004980 | Msa0267970 | 0.810093 | 1.367922e-50 | -8.615850e-47 |
| Msa0004980 | Msa0268130 | 0.838217 | 3.279392e-57 | -8.615850e-47 |
| Msa0004980 | Msa0280430 | 0.855911 | 4.592084e-62 | -8.615850e-47 |
| Msa0004980 | Msa0291520 | 0.813756 | 2.178963e-51 | -8.615850e-47 |
| Msa0004980 | Msa0294390 | 0.804886 | 1.741508e-49 | -8.615850e-47 |
| Msa0004980 | Msa0298990 | 0.830037 | 3.680077e-55 | -8.615850e-47 |
| Msa0004980 | Msa0300120 | 0.808261 | 3.378830e-50 | -8.615850e-47 |
| Msa0004980 | Msa0304260 | 0.820590 | 6.330511e-53 | -8.615850e-47 |
| Msa0004980 | Msa0304300 | 0.805582 | 1.245346e-49 | -8.615850e-47 |
| Msa0004980 | Msa0304590 | 0.836421 | 9.449284e-57 | -8.615850e-47 |
| Msa0004980 | Msa0304660 | 0.819917 | 9.027492e-53 | -8.615850e-47 |
| Msa0004980 | Msa0306710 | 0.805733 | 1.157455e-49 | -8.615850e-47 |
| Msa0004980 | Msa0322890 | 0.824193 | 9.215790e-54 | -8.615850e-47 |
| Msa0004980 | Msa0331700 | 0.821499 | 3.908577e-53 | -8.615850e-47 |
| Msa0004980 | Msa0337240 | 0.804966 | 1.675600e-49 | -8.615850e-47 |
| Msa0004980 | Msa0337650 | 0.842756 | 2.129377e-58 | -8.615850e-47 |
| Msa0004980 | Msa0355270 | 0.830788 | 2.411269e-55 | -8.615850e-47 |
| Msa0004980 | Msa0366890 | 0.810893 | 9.190400e-51 | -8.615850e-47 |
| Msa0004980 | Msa0369050 | 0.806582 | 7.670895e-50 | -8.615850e-47 |
| Msa0004980 | Msa0369220 | 0.820748 | 5.820727e-53 | -8.615850e-47 |
| Msa0004980 | Msa0370160 | -0.805854 | 1.091848e-49 | -8.615850e-47 |
| Msa0004980 | Msa0372670 | 0.803185 | 3.932779e-49 | -8.615850e-47 |
| Msa0004980 | Msa0376690 | 0.842008 | 3.360038e-58 | -8.615850e-47 |
| Msa0004980 | Msa0378490 | 0.803605 | 3.219554e-49 | -8.615850e-47 |
| Msa0004980 | Msa0380040 | 0.814689 | 1.355612e-51 | -8.615850e-47 |
| Msa0004980 | Msa0385580 | 0.800306 | 1.532915e-48 | -8.615850e-47 |
| Msa0004980 | Msa0392940 | 0.842746 | 2.141477e-58 | -8.615850e-47 |
| Msa0004980 | Msa0394400 | 0.809612 | 1.735834e-50 | -8.615850e-47 |
| Msa0004980 | Msa0398950 | 0.805761 | 1.142138e-49 | -8.615850e-47 |
| Msa0004980 | Msa0402330 | 0.832023 | 1.197249e-55 | -8.615850e-47 |
| Msa0004980 | Msa0414800 | 0.826765 | 2.266868e-54 | -8.615850e-47 |
| Msa0004980 | Msa0416400 | 0.815547 | 8.743406e-52 | -8.615850e-47 |
| Msa0004980 | Msa0419520 | 0.802278 | 6.051918e-49 | -8.615850e-47 |
| Msa0004980 | Msa0427150 | 0.817951 | 2.526122e-52 | -8.615850e-47 |
| Msa0004980 | Msa0429210 | 0.810542 | 1.094471e-50 | -8.615850e-47 |
| Msa0004980 | Msa0429290 | 0.817838 | 2.679507e-52 | -8.615850e-47 |
| Msa0004980 | Msa0437690 | -0.831069 | 2.057517e-55 | -8.615850e-47 |
| Msa0004980 | Msa0441130 | 0.805387 | 1.368450e-49 | -8.615850e-47 |
| Msa0004980 | Msa0443390 | 0.814818 | 1.269616e-51 | -8.615850e-47 |
| Msa0004980 | Msa0458060 | 0.829603 | 4.694671e-55 | -8.615850e-47 |
| Msa0004980 | Msa0465550 | 0.813204 | 2.880966e-51 | -8.615850e-47 |
| Msa0004980 | Msa0465790 | 0.806818 | 6.837326e-50 | -8.615850e-47 |
| Msa0004980 | Msa0471590 | 0.863770 | 1.964029e-64 | -8.615850e-47 |
| Msa0004980 | Msa0475580 | 0.811644 | 6.316352e-51 | -8.615850e-47 |
| Msa0004980 | Msa0481480 | 0.826500 | 2.621377e-54 | -8.615850e-47 |
| Msa0004980 | Msa0488020 | 0.812106 | 5.009716e-51 | -8.615850e-47 |
| Msa0004980 | Msa0493920 | 0.804153 | 2.476212e-49 | -8.615850e-47 |
| Msa0004980 | Msa0506400 | 0.804564 | 2.033089e-49 | -8.615850e-47 |
| Msa0004980 | Msa0508590 | 0.846938 | 1.585703e-59 | -8.615850e-47 |
| Msa0004980 | Msa0508630 | 0.843228 | 1.594565e-58 | -8.615850e-47 |
| Msa0004980 | Msa0509950 | -0.828950 | 6.759897e-55 | -8.615850e-47 |
| Msa0004980 | Msa0510350 | 0.804783 | 1.829998e-49 | -8.615850e-47 |
| Msa0004980 | Msa0519220 | 0.813516 | 2.459875e-51 | -8.615850e-47 |
| Msa0004980 | Msa0526540 | 0.832077 | 1.160914e-55 | -8.615850e-47 |
| Msa0004980 | Msa0541860 | 0.825714 | 4.032035e-54 | -8.615850e-47 |
| Msa0004980 | Msa0552810 | 0.816351 | 5.782957e-52 | -8.615850e-47 |
| Msa0004980 | Msa0576940 | 0.838822 | 2.288625e-57 | -8.615850e-47 |
| Msa0004980 | Msa0581070 | 0.840034 | 1.108334e-57 | -8.615850e-47 |
| Msa0004980 | Msa0610390 | 0.827756 | 1.312083e-54 | -8.615850e-47 |
| Msa0004980 | Msa0616240 | 0.809355 | 1.971217e-50 | -8.615850e-47 |
| Msa0004980 | Msa0618010 | 0.809181 | 2.148060e-50 | -8.615850e-47 |
| Msa0004980 | Msa0620890 | 0.826764 | 2.268438e-54 | -8.615850e-47 |
| Msa0004980 | Msa0623700 | 0.814175 | 1.761032e-51 | -8.615850e-47 |
| Msa0004980 | Msa0643560 | 0.804349 | 2.254578e-49 | -8.615850e-47 |
| Msa0004980 | Msa0647490 | 0.814287 | 1.663451e-51 | -8.615850e-47 |
| Msa0004980 | Msa0650920 | 0.836387 | 9.638770e-57 | -8.615850e-47 |
| Msa0004980 | Msa0661300 | 0.819257 | 1.277232e-52 | -8.615850e-47 |
| Msa0004980 | Msa0663900 | 0.814176 | 1.760371e-51 | -8.615850e-47 |
| Msa0004980 | Msa0680240 | 0.821830 | 3.276709e-53 | -8.615850e-47 |
| Msa0004980 | Msa0687630 | 0.858214 | 9.605087e-63 | -8.615850e-47 |
| Msa0004980 | Msa0690160 | 0.810128 | 1.344195e-50 | -8.615850e-47 |
| Msa0004980 | Msa0692940 | 0.828648 | 7.999683e-55 | -8.615850e-47 |
| Msa0004980 | Msa0698060 | 0.800688 | 1.281594e-48 | -8.615850e-47 |
| Msa0004980 | Msa0699570 | 0.812091 | 5.047875e-51 | -8.615850e-47 |
| Msa0004980 | Msa0703230 | 0.826487 | 2.640079e-54 | -8.615850e-47 |
| Msa0004980 | Msa0706960 | 0.824701 | 7.000208e-54 | -8.615850e-47 |
| Msa0004980 | Msa0718740 | 0.826451 | 2.693388e-54 | -8.615850e-47 |
| Msa0004980 | Msa0735310 | 0.803177 | 3.947760e-49 | -8.615850e-47 |
| Msa0004980 | Msa0747700 | 0.946131 | 8.270431e-105 | -8.615850e-47 |
| Msa0004980 | Msa0750920 | 0.815722 | 7.992535e-52 | -8.615850e-47 |
| Msa0004980 | Msa0755340 | 0.814476 | 1.511250e-51 | -8.615850e-47 |
| Msa0004980 | Msa0770200 | 0.802925 | 4.452300e-49 | -8.615850e-47 |
| Msa0004980 | Msa0787750 | 0.830998 | 2.141124e-55 | -8.615850e-47 |
| Msa0004980 | Msa0805500 | 0.803326 | 3.676793e-49 | -8.615850e-47 |
| Msa0004980 | Msa0806920 | 0.811724 | 6.066437e-51 | -8.615850e-47 |
| Msa0004980 | Msa0813720 | 0.838650 | 2.535207e-57 | -8.615850e-47 |
| Msa0004980 | Msa0823090 | 0.820173 | 7.889530e-53 | -8.615850e-47 |
| Msa0004980 | Msa0824640 | 0.813870 | 2.056612e-51 | -8.615850e-47 |
| Msa0004980 | Msa0830990 | 0.801310 | 9.565398e-49 | -8.615850e-47 |
| Msa0004980 | Msa0837660 | 0.803443 | 3.477400e-49 | -8.615850e-47 |
| Msa0004980 | Msa0842830 | 0.811383 | 7.194857e-51 | -8.615850e-47 |
| Msa0004980 | Msa0854120 | 0.807892 | 4.048041e-50 | -8.615850e-47 |
| Msa0004980 | Msa0864010 | 0.811444 | 6.979011e-51 | -8.615850e-47 |
| Msa0004980 | Msa0874500 | 0.806885 | 6.620420e-50 | -8.615850e-47 |
| Msa0004980 | Msa0881270 | 0.818338 | 2.065349e-52 | -8.615850e-47 |
| Msa0004980 | Msa0900630 | 0.856981 | 2.226453e-62 | -8.615850e-47 |
| Msa0004980 | Msa0926460 | 0.839282 | 1.739379e-57 | -8.615850e-47 |
| Msa0004980 | Msa0944190 | 0.806941 | 6.440651e-50 | -8.615850e-47 |
| Msa0004980 | Msa0965860 | 0.829111 | 6.179218e-55 | -8.615850e-47 |
| Msa0004980 | Msa0966270 | 0.814493 | 1.498389e-51 | -8.615850e-47 |
| Msa0004980 | Msa0974810 | 0.830093 | 3.566074e-55 | -8.615850e-47 |
| Msa0004980 | Msa1000690 | 0.818161 | 2.264122e-52 | -8.615850e-47 |
| Msa0004980 | Msa1019240 | 0.839686 | 1.366002e-57 | -8.615850e-47 |
| Msa0004980 | Msa1019260 | 0.846852 | 1.673629e-59 | -8.615850e-47 |
| Msa0004980 | Msa1046020 | 0.807141 | 5.842929e-50 | -8.615850e-47 |
| Msa0004980 | Msa1073400 | 0.809052 | 2.289760e-50 | -8.615850e-47 |
| Msa0004980 | Msa1081150 | 0.826474 | 2.660027e-54 | -8.615850e-47 |
| Msa0004980 | Msa1082700 | 0.815022 | 1.143985e-51 | -8.615850e-47 |
| Msa0004980 | Msa1084470 | 0.837875 | 4.014920e-57 | -8.615850e-47 |
| Msa0004980 | Msa1089840 | 0.808139 | 3.587535e-50 | -8.615850e-47 |
| Msa0004980 | Msa1104140 | 0.834099 | 3.645603e-56 | -8.615850e-47 |
| Msa0004980 | Msa1104210 | 0.855550 | 5.850526e-62 | -8.615850e-47 |
| Msa0004980 | Msa1126120 | -0.801509 | 8.708934e-49 | -8.615850e-47 |
| Msa0004980 | Msa1126510 | 0.841774 | 3.875790e-58 | -8.615850e-47 |
| Msa0004980 | Msa1126770 | 0.842212 | 2.967967e-58 | -8.615850e-47 |
| Msa0004980 | Msa1131560 | 0.802394 | 5.728373e-49 | -8.615850e-47 |
| Msa0004980 | Msa1134090 | 0.806010 | 1.012338e-49 | -8.615850e-47 |
| Msa0004980 | Msa1134110 | 0.801005 | 1.104265e-48 | -8.615850e-47 |
| Msa0004980 | Msa1136540 | 0.800369 | 1.488599e-48 | -8.615850e-47 |
| Msa0004980 | Msa1138870 | 0.830712 | 2.516030e-55 | -8.615850e-47 |
| Msa0004980 | Msa1143840 | 0.830468 | 2.888010e-55 | -8.615850e-47 |
| Msa0004980 | Msa1165870 | 0.822888 | 1.860988e-53 | -8.615850e-47 |
| Msa0004980 | Msa1166010 | 0.837377 | 5.387282e-57 | -8.615850e-47 |
| Msa0004980 | Msa1166860 | 0.852492 | 4.456033e-61 | -8.615850e-47 |
| Msa0004980 | Msa1166870 | 0.834878 | 2.322757e-56 | -8.615850e-47 |
| Msa0004980 | Msa1171870 | 0.807270 | 5.487497e-50 | -8.615850e-47 |
| Msa0004980 | Msa1179950 | 0.806659 | 7.386539e-50 | -8.615850e-47 |
| Msa0004980 | Msa1179980 | 0.802865 | 4.580813e-49 | -8.615850e-47 |
| Msa0004980 | Msa1184370 | 0.824414 | 8.175467e-54 | -8.615850e-47 |
| Msa0004980 | Msa1218600 | 0.801346 | 9.402640e-49 | -8.615850e-47 |
| Msa0004980 | Msa1227690 | 0.815003 | 1.155082e-51 | -8.615850e-47 |
| Msa0004980 | Msa1234680 | 0.801858 | 7.382757e-49 | -8.615850e-47 |
| Msa0004980 | Msa1237940 | 0.810505 | 1.115133e-50 | -8.615850e-47 |
| Msa0004980 | Msa1257510 | 0.823339 | 1.460943e-53 | -8.615850e-47 |
| Msa0004980 | Msa1260130 | 0.829590 | 4.727899e-55 | -8.615850e-47 |
| Msa0004980 | Msa1265630 | 0.806218 | 9.153851e-50 | -8.615850e-47 |
| Msa0004980 | Msa1269300 | 0.810543 | 1.094094e-50 | -8.615850e-47 |
| Msa0004980 | Msa1270620 | 0.812294 | 4.558993e-51 | -8.615850e-47 |
| Msa0004980 | Msa1270690 | 0.805256 | 1.457712e-49 | -8.615850e-47 |
| Msa0004980 | Msa1276930 | 0.812527 | 4.053001e-51 | -8.615850e-47 |
| Msa0004980 | Msa1281190 | 0.808103 | 3.650114e-50 | -8.615850e-47 |
| Msa0004980 | Msa1295110 | 0.803297 | 3.728561e-49 | -8.615850e-47 |
| Msa0004980 | Msa1304820 | 0.827222 | 1.762360e-54 | -8.615850e-47 |
| Msa0004980 | Msa1306430 | 0.816552 | 5.215059e-52 | -8.615850e-47 |
| Msa0004980 | Msa1306990 | 0.804887 | 1.741302e-49 | -8.615850e-47 |
| Msa0004980 | Msa1307950 | 0.825125 | 5.558418e-54 | -8.615850e-47 |
| Msa0004980 | Msa1310690 | 0.803544 | 3.314110e-49 | -8.615850e-47 |
| Msa0004980 | Msa1316830 | 0.816364 | 5.745138e-52 | -8.615850e-47 |
| Msa0004980 | Msa1335940 | 0.840871 | 6.695398e-58 | -8.615850e-47 |
| Msa0004980 | Msa1336950 | 0.805465 | 1.317308e-49 | -8.615850e-47 |
| Msa0004980 | Msa1343290 | 0.816795 | 4.599886e-52 | -8.615850e-47 |
| Msa0004980 | Msa1345450 | 0.810830 | 9.481311e-51 | -8.615850e-47 |
| Msa0004980 | Msa1363330 | 0.829797 | 4.211171e-55 | -8.615850e-47 |
| Msa0004980 | Msa1365150 | 0.834625 | 2.689283e-56 | -8.615850e-47 |
| Msa0004980 | Msa1367880 | 0.826734 | 2.306286e-54 | -8.615850e-47 |
| Msa0004980 | Msa1368120 | 0.806296 | 8.813248e-50 | -8.615850e-47 |
| Msa0004980 | Msa1370860 | 0.816052 | 6.746337e-52 | -8.615850e-47 |
| Msa0004980 | Msa1379760 | 0.829169 | 5.981761e-55 | -8.615850e-47 |
| Msa0004980 | Msa1385770 | 0.805785 | 1.129060e-49 | -8.615850e-47 |
| Msa0004980 | Msa1386600 | 0.829235 | 5.766896e-55 | -8.615850e-47 |
| Msa0004980 | Msa1394290 | 0.804538 | 2.058595e-49 | -8.615850e-47 |
| Msa0004980 | Msa1397810 | 0.818289 | 2.118925e-52 | -8.615850e-47 |
| Msa0004980 | Msa1397940 | 0.814576 | 1.436019e-51 | -8.615850e-47 |
| Msa0004980 | Msa1404010 | 0.822459 | 2.342128e-53 | -8.615850e-47 |
| Msa0004980 | Msa1404190 | 0.852781 | 3.685698e-61 | -8.615850e-47 |
| Msa0004980 | Msa1409240 | 0.803242 | 3.828194e-49 | -8.615850e-47 |
| Msa0004980 | Msa1431040 | 0.808645 | 2.797681e-50 | -8.615850e-47 |
| Msa0004980 | Msa1438640 | 0.835245 | 1.877165e-56 | -8.615850e-47 |
| Msa0004980 | Msa1442850 | 0.833935 | 4.007347e-56 | -8.615850e-47 |
| Msa0004980 | Msa1444310 | 0.814662 | 1.374583e-51 | -8.615850e-47 |
| Msa0004980 | Msa1448690 | 0.825040 | 5.821363e-54 | -8.615850e-47 |
| Msa0004980 | Msa1450280 | 0.826430 | 2.724703e-54 | -8.615850e-47 |
| Msa0004980 | Msa1460470 | 0.817984 | 2.483116e-52 | -8.615850e-47 |
| Msa0004980 | Msa1465080 | 0.809394 | 1.933561e-50 | -8.615850e-47 |
| Msa0004980 | Msa1465960 | 0.800144 | 1.654352e-48 | -8.615850e-47 |
| Msa0004980 | Msa1466990 | 0.813090 | 3.051934e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0004980 | MtrunA17_Chr1g0151791 | 89.057 | 265 | 24 | 3 | 1 | 263 | 1 | 262 | 7.71e-153 | 426 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0004980 | AT3G20430.1 | 49.630 | 270 | 117 | 8 | 1 | 261 | 1 | 260 | 2.61e-69 | 215 |
Find 64 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTGATGGTAAGCGATTT+CGG | 0.295356 | 1_1:+7427759 | Msa0004980:CDS |
| ATTATCTCTTTGTAAGCATT+TGG | 0.296419 | 1_1:-7427824 | None:intergenic |
| TAATAATACAGAAGCAATTC+AGG | 0.298572 | 1_1:+7428598 | Msa0004980:intron |
| CGGCGACACCGTTTCGATTA+TGG | 0.307561 | 1_1:-7424246 | None:intergenic |
| ACCTTGCCTTGAATGGAAAA+AGG | 0.310470 | 1_1:+7428861 | Msa0004980:exon |
| AATTACTTGTCATAGTTAAC+TGG | 0.317290 | 1_1:+7429050 | Msa0004980:three_prime_UTR |
| TTACTAACCGTTTGGACTTT+GGG | 0.323821 | 1_1:+7424112 | Msa0004980:five_prime_UTR |
| ATTTGCAGTGTTCAAAAGAT+AGG | 0.347975 | 1_1:+7429025 | Msa0004980:three_prime_UTR |
| GTTACTAACCGTTTGGACTT+TGG | 0.392871 | 1_1:+7424111 | Msa0004980:five_prime_UTR |
| TGGAGCAGTATGGTTCCATT+TGG | 0.397434 | 1_1:+7428988 | Msa0004980:three_prime_UTR |
| CTCGAGAGTTACTAACCGTT+TGG | 0.402894 | 1_1:+7424104 | Msa0004980:five_prime_UTR |
| AAGAGAAAGAGAAAGGCTTT+AGG | 0.415930 | 1_1:+7424361 | Msa0004980:CDS |
| TGATGTAACCTTGCCTTGAA+TGG | 0.441747 | 1_1:+7428854 | Msa0004980:exon |
| ATTCTTAATCTGTCATGAAC+AGG | 0.445504 | 1_1:-7428786 | None:intergenic |
| TGATGTTGAAGAGGGTGAAT+TGG | 0.447652 | 1_1:+7424201 | Msa0004980:CDS |
| AGATCATCATCATAGGAAAC+AGG | 0.457123 | 1_1:-7428810 | None:intergenic |
| ATACAGCTGTAGGTTGCCTT+GGG | 0.458577 | 1_1:+7424743 | Msa0004980:CDS |
| TCCTATGATGATGATCTGCT+TGG | 0.462050 | 1_1:+7428816 | Msa0004980:CDS |
| TGCTTGTGACAACAAGTTCA+CGG | 0.464463 | 1_1:+7428964 | Msa0004980:three_prime_UTR |
| TATACAGCTGTAGGTTGCCT+TGG | 0.468657 | 1_1:+7424742 | Msa0004980:CDS |
| AAGAAACCTGTCAATGTTGA+TGG | 0.484273 | 1_1:-7424398 | None:intergenic |
| ATGCACCCATCAACATTGAC+AGG | 0.486157 | 1_1:+7424392 | Msa0004980:CDS |
| AGTTCACGGATGGAGCAGTA+TGG | 0.487453 | 1_1:+7428978 | Msa0004980:three_prime_UTR |
| GCTTACCATCAGCAGTCTGC+TGG | 0.494811 | 1_1:-7427751 | None:intergenic |
| AACCGTTTGGACTTTGGGCA+TGG | 0.500346 | 1_1:+7424117 | Msa0004980:exon |
| TTTAATAAAATATATACTGT+TGG | 0.502477 | 1_1:+7429098 | Msa0004980:three_prime_UTR |
| AGCAGTCTGCTGGCCTCCAC+AGG | 0.505033 | 1_1:-7427741 | None:intergenic |
| GTTTGGACTTTGGGCATGGA+GGG | 0.505226 | 1_1:+7424121 | Msa0004980:exon |
| TCTTTCATGCAAAATCCAAA+TGG | 0.506086 | 1_1:-7429003 | None:intergenic |
| GATGGTAAGCGATTTCGGAC+AGG | 0.509601 | 1_1:+7427764 | Msa0004980:CDS |
| TCCAAGCAGATCATCATCAT+AGG | 0.511312 | 1_1:-7428817 | None:intergenic |
| GTGTATGGAAAGAAGAAAGA+AGG | 0.513511 | 1_1:-7428921 | None:intergenic |
| CAAGATCAAGATAAACCGCC+AGG | 0.529708 | 1_1:+7428744 | Msa0004980:CDS |
| GAGAAAGGCTTTAGGAGGAT+CGG | 0.532126 | 1_1:+7424369 | Msa0004980:CDS |
| CTCCATGCCCAAAGTCCAAA+CGG | 0.533352 | 1_1:-7424119 | None:intergenic |
| ATGGATGCCTGCTTAAAACT+TGG | 0.535810 | 1_1:-7428624 | None:intergenic |
| TGGACTTTGGGCATGGAGGG+TGG | 0.538466 | 1_1:+7424124 | Msa0004980:exon |
| CGTTTGGACTTTGGGCATGG+AGG | 0.562585 | 1_1:+7424120 | Msa0004980:exon |
| ATGGTAAGCGATTTCGGACA+GGG | 0.567855 | 1_1:+7427765 | Msa0004980:CDS |
| GAACAAGACCATAATCGAAA+CGG | 0.575699 | 1_1:+7424238 | Msa0004980:CDS |
| CGCTCAACGCAGAAATCCCA+AGG | 0.577857 | 1_1:-7424759 | None:intergenic |
| AGAAAGAGAAAGGCTTTAGG+AGG | 0.581783 | 1_1:+7424364 | Msa0004980:CDS |
| TGCATTTGCGATGCGCAAGT+AGG | 0.587168 | 1_1:-7428723 | None:intergenic |
| AAACGGTGTCGCCGCCACAC+AGG | 0.597293 | 1_1:+7424255 | Msa0004980:CDS |
| AGAAGAAGACGATGTTGAGA+TGG | 0.597325 | 1_1:+7424177 | Msa0004980:CDS |
| AGAGGAGGATTCTTCTCAAG+AGG | 0.611513 | 1_1:+7428653 | Msa0004980:CDS |
| TGTGACAACAAGTTCACGGA+TGG | 0.614628 | 1_1:+7428968 | Msa0004980:three_prime_UTR |
| GGTTTGTGATAGAGACATGT+CGG | 0.623578 | 1_1:+7424689 | Msa0004980:intron |
| TAGAACGTTGTTGAAAAGTG+TGG | 0.623743 | 1_1:+7429121 | Msa0004980:three_prime_UTR |
| GAGATGGTTGATGTTGAAGA+GGG | 0.630707 | 1_1:+7424193 | Msa0004980:CDS |
| GGAGGCCAGCAGACTGCTGA+TGG | 0.631237 | 1_1:+7427746 | Msa0004980:CDS |
| TGAGATGGTTGATGTTGAAG+AGG | 0.639578 | 1_1:+7424192 | Msa0004980:CDS |
| GGTAAGCGATTTCGGACAGG+GGG | 0.641482 | 1_1:+7427767 | Msa0004980:CDS |
| AAGTAGGATTGTCAGAAACA+TGG | 0.643430 | 1_1:-7428707 | None:intergenic |
| ACGTTGTTGAAAAGTGTGGT+TGG | 0.646774 | 1_1:+7429125 | Msa0004980:three_prime_UTR |
| AGAAACCTGTCAATGTTGAT+GGG | 0.647666 | 1_1:-7424397 | None:intergenic |
| GTTGAGCGATATCGTCAAAG+AGG | 0.648067 | 1_1:+7424774 | Msa0004980:CDS |
| TACATGGTATATACAGCTGT+AGG | 0.664112 | 1_1:+7424733 | Msa0004980:CDS |
| GACGCAATACAGTCCTGTGG+AGG | 0.666430 | 1_1:+7427728 | Msa0004980:CDS |
| TGCGCACTAGAAAATGTACA+AGG | 0.667493 | 1_1:-7428678 | None:intergenic |
| TGGTAAGCGATTTCGGACAG+GGG | 0.706451 | 1_1:+7427766 | Msa0004980:CDS |
| GTAGACGCAATACAGTCCTG+TGG | 0.714054 | 1_1:+7427725 | Msa0004980:CDS |
| GAGATTATGATCCTGTGTGG+CGG | 0.728683 | 1_1:-7424266 | None:intergenic |
| AATGAGATTATGATCCTGTG+TGG | 0.779299 | 1_1:-7424269 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAATCATGAAATATA+AGG | - | chr1_1:7425887-7425906 | None:intergenic | 10.0% |
| !! | TATTTCATGATTTATTTAAT+AGG | + | chr1_1:7425889-7425908 | Msa0004980:intron | 10.0% |
| !! | GTATTATCAATATAATTATT+CGG | + | chr1_1:7426004-7426023 | Msa0004980:intron | 10.0% |
| !! | ATGTGTATAAAATTAAATAT+TGG | - | chr1_1:7427018-7427037 | None:intergenic | 10.0% |
| !!! | TTTAACATTTTAATTTTTTC+TGG | + | chr1_1:7427183-7427202 | Msa0004980:intron | 10.0% |
| !! | TTTAATAAAATATATACTGT+TGG | + | chr1_1:7429098-7429117 | Msa0004980:three_prime_UTR | 10.0% |
| !! | AATATAATGCACTAATAATT+AGG | - | chr1_1:7425026-7425045 | None:intergenic | 15.0% |
| !! | TAGTGCATTATATTATTAAT+TGG | + | chr1_1:7425032-7425051 | Msa0004980:intron | 15.0% |
| !!! | AGAGTATTTGAATTATATTT+TGG | + | chr1_1:7425844-7425863 | Msa0004980:intron | 15.0% |
| !!! | GAGTATTTGAATTATATTTT+GGG | + | chr1_1:7425845-7425864 | Msa0004980:intron | 15.0% |
| !! | GATATCTTATTGAAATAATA+AGG | - | chr1_1:7426064-7426083 | None:intergenic | 15.0% |
| !! | AATAAAGGGAAATTATTAAA+AGG | - | chr1_1:7426736-7426755 | None:intergenic | 15.0% |
| !!! | TATTTAGGAAAATTCAATTT+TGG | - | chr1_1:7427093-7427112 | None:intergenic | 15.0% |
| !! | GTTAAATTCTTATAAAACAA+AGG | - | chr1_1:7427169-7427188 | None:intergenic | 15.0% |
| !! | TAAAATTAATACCAGAAAAA+TGG | + | chr1_1:7428309-7428328 | Msa0004980:intron | 15.0% |
| !! | AGAGTAATGATTAAATGTAA+TGG | - | chr1_1:7424606-7424625 | None:intergenic | 20.0% |
| !! | TGTATTTACTTATGTCAAAA+CGG | - | chr1_1:7424638-7424657 | None:intergenic | 20.0% |
| !! | TTCATTTGATAAAACAGTTT+AGG | - | chr1_1:7424994-7425013 | None:intergenic | 20.0% |
| !!! | AACTGTTTTATCAAATGAAA+AGG | + | chr1_1:7424995-7425014 | Msa0004980:intron | 20.0% |
| !! | TCTTCAATTATTAAGATATC+TGG | - | chr1_1:7425078-7425097 | None:intergenic | 20.0% |
| !! | AGAATTACAAAATCAGTATT+AGG | - | chr1_1:7425377-7425396 | None:intergenic | 20.0% |
| !!! | TTTGAATTATATTTTGGGTT+TGG | + | chr1_1:7425850-7425869 | Msa0004980:intron | 20.0% |
| !! | TCATGAAATATAAGGAAATA+TGG | - | chr1_1:7425879-7425898 | None:intergenic | 20.0% |
| !! | TATTGAAATAATAAGGACTT+GGG | - | chr1_1:7426057-7426076 | None:intergenic | 20.0% |
| !! | TTATTGAAATAATAAGGACT+TGG | - | chr1_1:7426058-7426077 | None:intergenic | 20.0% |
| !!! | TTGTTTTGAACTTTTTTGTT+TGG | + | chr1_1:7426154-7426173 | Msa0004980:intron | 20.0% |
| !! | TCTAAGGAAAAAAACAATAT+GGG | - | chr1_1:7426311-7426330 | None:intergenic | 20.0% |
| !! | ATCTAAGGAAAAAAACAATA+TGG | - | chr1_1:7426312-7426331 | None:intergenic | 20.0% |
| !! | TAATAATTTCCCTTTATTGA+TGG | + | chr1_1:7426738-7426757 | Msa0004980:intron | 20.0% |
| !! | AATAATTTCCCTTTATTGAT+GGG | + | chr1_1:7426739-7426758 | Msa0004980:intron | 20.0% |
| !! | TATATGAGAGAAAAATAAAG+TGG | - | chr1_1:7427047-7427066 | None:intergenic | 20.0% |
| !! | AATTTCATTACAGTTATAGA+AGG | + | chr1_1:7427142-7427161 | Msa0004980:intron | 20.0% |
| !!! | TTAAGATTTTAGTGTAAACA+TGG | + | chr1_1:7427266-7427285 | Msa0004980:intron | 20.0% |
| !!! | GTTGAAATCTAAAATATTGT+TGG | + | chr1_1:7427337-7427356 | Msa0004980:intron | 20.0% |
| !! | CCAAAATTCATAACAAAAAA+TGG | - | chr1_1:7427504-7427523 | None:intergenic | 20.0% |
| !!! | CCATTTTTTGTTATGAATTT+TGG | + | chr1_1:7427501-7427520 | Msa0004980:intron | 20.0% |
| !! | ATTATACTCTTCATAAATCA+TGG | + | chr1_1:7427545-7427564 | Msa0004980:intron | 20.0% |
| !!! | TTGGATTGATAATTTTTACT+AGG | - | chr1_1:7428083-7428102 | None:intergenic | 20.0% |
| !! | AGAGTAAAGTGAAAAAAAAA+AGG | - | chr1_1:7428120-7428139 | None:intergenic | 20.0% |
| !!! | TTTTTTTCACTTTACTCTAA+TGG | + | chr1_1:7428122-7428141 | Msa0004980:intron | 20.0% |
| !! | AAATAATATTTGAATGACCT+TGG | - | chr1_1:7428529-7428548 | None:intergenic | 20.0% |
| ! | TAAAAACAAGAGAAAGAGAA+AGG | + | chr1_1:7424354-7424373 | Msa0004980:CDS | 25.0% |
| !! | CATTATTAGGGTTTGAAATT+GGG | - | chr1_1:7424431-7424450 | None:intergenic | 25.0% |
| ! | TAACACATTCAGCATTATTA+GGG | - | chr1_1:7424443-7424462 | None:intergenic | 25.0% |
| ! | ATAACACATTCAGCATTATT+AGG | - | chr1_1:7424444-7424463 | None:intergenic | 25.0% |
| !!! | CTGTTTTCAGCTTATTTTAA+GGG | + | chr1_1:7424563-7424582 | Msa0004980:intron | 25.0% |
| !! | TGATTAAATGTAATGGAACA+AGG | - | chr1_1:7424599-7424618 | None:intergenic | 25.0% |
| !!! | ATGAATTATGTGCTTTTTTC+AGG | + | chr1_1:7424668-7424687 | Msa0004980:intron | 25.0% |
| ! | GAAAGAGAAAAAATCATACA+TGG | + | chr1_1:7424717-7424736 | Msa0004980:CDS | 25.0% |
| !! | TACAAAGTTGTTTCAAATTG+TGG | - | chr1_1:7424925-7424944 | None:intergenic | 25.0% |
| !! | TTGTTTTCAGACATTCTAAA+TGG | - | chr1_1:7424960-7424979 | None:intergenic | 25.0% |
| ! | ATAATGCACTAATAATTAGG+TGG | - | chr1_1:7425023-7425042 | None:intergenic | 25.0% |
| ! | ATTATCAAACCAGTGTAAAA+AGG | - | chr1_1:7425232-7425251 | None:intergenic | 25.0% |
| ! | TGCTAAGAACTATTGATATT+TGG | + | chr1_1:7425284-7425303 | Msa0004980:intron | 25.0% |
| ! | GCTAAGAACTATTGATATTT+GGG | + | chr1_1:7425285-7425304 | Msa0004980:intron | 25.0% |
| ! | CTAAGAACTATTGATATTTG+GGG | + | chr1_1:7425286-7425305 | Msa0004980:intron | 25.0% |
| ! | TAAGAACTATTGATATTTGG+GGG | + | chr1_1:7425287-7425306 | Msa0004980:intron | 25.0% |
| !!! | AATTCTTCTTATTTCTATCG+AGG | + | chr1_1:7425398-7425417 | Msa0004980:intron | 25.0% |
| ! | GATTATGAAATCAGTTAAGA+AGG | - | chr1_1:7425524-7425543 | None:intergenic | 25.0% |
| ! | ATACAAGTAAAAGAACACAA+AGG | - | chr1_1:7425553-7425572 | None:intergenic | 25.0% |
| !! | TTTGTGTTCTTTTACTTGTA+TGG | + | chr1_1:7425552-7425571 | Msa0004980:intron | 25.0% |
| !! | TAAGAATGATCGATATTTTG+TGG | + | chr1_1:7425588-7425607 | Msa0004980:intron | 25.0% |
| !! | ATCTAGTAGGAGTATAAATA+AGG | + | chr1_1:7425924-7425943 | Msa0004980:intron | 25.0% |
| !! | TCTAGTAGGAGTATAAATAA+GGG | + | chr1_1:7425925-7425944 | Msa0004980:intron | 25.0% |
| ! | CAATATAATTATTCGGAGTT+TGG | + | chr1_1:7426011-7426030 | Msa0004980:intron | 25.0% |
| !!! | AGACCAATTACTCTAAAATT+TGG | + | chr1_1:7426124-7426143 | Msa0004980:intron | 25.0% |
| !!! | GACCAATTACTCTAAAATTT+GGG | + | chr1_1:7426125-7426144 | Msa0004980:intron | 25.0% |
| !!! | ATCCCAAATTTTAGAGTAAT+TGG | - | chr1_1:7426130-7426149 | None:intergenic | 25.0% |
| ! | GTACACTGTAAAAAAATCTA+AGG | - | chr1_1:7426327-7426346 | None:intergenic | 25.0% |
| !! | TGTTGAAATGATAAGGTTTT+AGG | - | chr1_1:7426612-7426631 | None:intergenic | 25.0% |
| ! | AAGTATCTGTTGAAATGATA+AGG | - | chr1_1:7426619-7426638 | None:intergenic | 25.0% |
| ! | AGTAATAGATAAGCATAATC+AGG | - | chr1_1:7426856-7426875 | None:intergenic | 25.0% |
| ! | TCAAAGTTTAAACAGAGAAT+TGG | - | chr1_1:7426976-7426995 | None:intergenic | 25.0% |
| ! | TAACTGTAATGAAATTCAGA+TGG | - | chr1_1:7427138-7427157 | None:intergenic | 25.0% |
| !! | ATGAAAGTATATTGTTGAGT+AGG | + | chr1_1:7427212-7427231 | Msa0004980:intron | 25.0% |
| ! | AATAGTAAAGGAACAATTGA+TGG | + | chr1_1:7427236-7427255 | Msa0004980:intron | 25.0% |
| ! | TGATTCTCCTACATATATTA+GGG | - | chr1_1:7427302-7427321 | None:intergenic | 25.0% |
| ! | TTGATTCTCCTACATATATT+AGG | - | chr1_1:7427303-7427322 | None:intergenic | 25.0% |
| !! | GATTTATGAAGAGTATAATG+TGG | - | chr1_1:7427544-7427563 | None:intergenic | 25.0% |
| !! | TCTTTGGGTTTAATTATGTT+TGG | + | chr1_1:7427636-7427655 | Msa0004980:intron | 25.0% |
| ! | TAATTAAGTGTTAAACTCAC+AGG | + | chr1_1:7427703-7427722 | Msa0004980:intron | 25.0% |
| ! | ATTATCTCTTTGTAAGCATT+TGG | - | chr1_1:7427827-7427846 | None:intergenic | 25.0% |
| ! | TGTTTAAGCAGTAAAAAGTA+AGG | - | chr1_1:7427885-7427904 | None:intergenic | 25.0% |
| !!! | CTTTACTCTAATGGATTTTA+AGG | + | chr1_1:7428131-7428150 | Msa0004980:intron | 25.0% |
| !!! | GTCCAGTTTTTTTTATGTTA+GGG | - | chr1_1:7428183-7428202 | None:intergenic | 25.0% |
| !!! | TGTCCAGTTTTTTTTATGTT+AGG | - | chr1_1:7428184-7428203 | None:intergenic | 25.0% |
| !!! | ATGAACAATTTCCATTTTTC+TGG | - | chr1_1:7428323-7428342 | None:intergenic | 25.0% |
| ! | TATCAAACAAAAAATCTTCC+CGG | - | chr1_1:7428373-7428392 | None:intergenic | 25.0% |
| ! | GATTATATTTAAGAGCAACT+GGG | - | chr1_1:7428490-7428509 | None:intergenic | 25.0% |
| ! | TGATTATATTTAAGAGCAAC+TGG | - | chr1_1:7428491-7428510 | None:intergenic | 25.0% |
| !! | CATTGATTAATAATCAACCA+AGG | + | chr1_1:7428509-7428528 | Msa0004980:intron | 25.0% |
| ! | AATGAATAAAAAAACGTTCC+AGG | - | chr1_1:7428894-7428913 | None:intergenic | 25.0% |
| ! | AATTACTTGTCATAGTTAAC+TGG | + | chr1_1:7429050-7429069 | Msa0004980:three_prime_UTR | 25.0% |
| CAAAACCTCTCAGTAAAAAT+CGG | + | chr1_1:7424326-7424345 | Msa0004980:CDS | 30.0% | |
| ! | GCATTATTAGGGTTTGAAAT+TGG | - | chr1_1:7424432-7424451 | None:intergenic | 30.0% |
| !!! | GCTGTTTTCAGCTTATTTTA+AGG | + | chr1_1:7424562-7424581 | Msa0004980:intron | 30.0% |
| AGATGAAAATCAACATTGCA+AGG | - | chr1_1:7424818-7424837 | None:intergenic | 30.0% | |
| ! | TGATTTTCATCTTGAATGCA+TGG | + | chr1_1:7424826-7424845 | Msa0004980:intron | 30.0% |
| ! | GTTTGATAATTCTGAATCCT+CGG | + | chr1_1:7425242-7425261 | Msa0004980:intron | 30.0% |
| TTAGGAGAATAGACATGTAT+TGG | - | chr1_1:7425359-7425378 | None:intergenic | 30.0% | |
| CGATAAGAATGATACGTATT+TGG | + | chr1_1:7425428-7425447 | Msa0004980:intron | 30.0% | |
| TAAGAATGATACGTATTTGG+TGG | + | chr1_1:7425431-7425450 | Msa0004980:intron | 30.0% | |
| AAAACCCAACAACATTTGTA+AGG | - | chr1_1:7425755-7425774 | None:intergenic | 30.0% | |
| !!! | TTGTTGGGTTTTTTCATAGA+TGG | + | chr1_1:7425763-7425782 | Msa0004980:intron | 30.0% |
| AATAATAAGGACTTGGGAAA+AGG | - | chr1_1:7426051-7426070 | None:intergenic | 30.0% | |
| AAGAATGTGAGACCAATTAT+GGG | - | chr1_1:7426196-7426215 | None:intergenic | 30.0% | |
| TAAGAATGTGAGACCAATTA+TGG | - | chr1_1:7426197-7426216 | None:intergenic | 30.0% | |
| TCATTTCAACAGATACTTTG+CGG | + | chr1_1:7426621-7426640 | Msa0004980:intron | 30.0% | |
| ! | AATGCAACACACATTTTACT+GGG | - | chr1_1:7426696-7426715 | None:intergenic | 30.0% |
| TTGTATTGTATGGTCTTCTA+GGG | - | chr1_1:7426879-7426898 | None:intergenic | 30.0% | |
| CTGTAAATGGTTGTATTGTA+TGG | - | chr1_1:7426889-7426908 | None:intergenic | 30.0% | |
| AACACATCAGAAACTGTAAA+TGG | - | chr1_1:7426902-7426921 | None:intergenic | 30.0% | |
| AGTTTAAACAGAGAATTGGA+AGG | - | chr1_1:7426972-7426991 | None:intergenic | 30.0% | |
| TGTTTAAACTTTGATGTTCC+TGG | + | chr1_1:7426982-7427001 | Msa0004980:intron | 30.0% | |
| TTTCTCTCATATAAACAGAG+CGG | + | chr1_1:7427054-7427073 | Msa0004980:intron | 30.0% | |
| !!! | TCAATTTTGGCTTACTTTGT+TGG | - | chr1_1:7427080-7427099 | None:intergenic | 30.0% |
| TGTTGAGTAGGTAATAGTAA+AGG | + | chr1_1:7427224-7427243 | Msa0004980:intron | 30.0% | |
| !! | GATTTTAGTGTAAACATGGT+AGG | + | chr1_1:7427270-7427289 | Msa0004980:intron | 30.0% |
| ! | AGAATCAAACTGAAGGTTTT+TGG | + | chr1_1:7427315-7427334 | Msa0004980:intron | 30.0% |
| ! | ATCTAAAATATTGTTGGACG+AGG | + | chr1_1:7427343-7427362 | Msa0004980:intron | 30.0% |
| ! | TCTAAAATATTGTTGGACGA+GGG | + | chr1_1:7427344-7427363 | Msa0004980:intron | 30.0% |
| GCAAGTACAAAATTCCTAAA+GGG | - | chr1_1:7427391-7427410 | None:intergenic | 30.0% | |
| AGCAAGTACAAAATTCCTAA+AGG | - | chr1_1:7427392-7427411 | None:intergenic | 30.0% | |
| ATTTGTCCAATGAACGTATT+AGG | + | chr1_1:7427452-7427471 | Msa0004980:intron | 30.0% | |
| CTAATACCTAATACGTTCAT+TGG | - | chr1_1:7427461-7427480 | None:intergenic | 30.0% | |
| ATACTCTTCATAAATCATGG+TGG | + | chr1_1:7427548-7427567 | Msa0004980:intron | 30.0% | |
| AAAACAACTGAACTTGTCTT+TGG | + | chr1_1:7427620-7427639 | Msa0004980:intron | 30.0% | |
| AAACAACTGAACTTGTCTTT+GGG | + | chr1_1:7427621-7427640 | Msa0004980:intron | 30.0% | |
| CACCCTAACATAAAAAAAAC+TGG | + | chr1_1:7428178-7428197 | Msa0004980:intron | 30.0% | |
| AAAACTGGACAAAATATAGC+TGG | + | chr1_1:7428193-7428212 | Msa0004980:intron | 30.0% | |
| ! | TTAAGCATACAACAGTCTTT+TGG | + | chr1_1:7428250-7428269 | Msa0004980:intron | 30.0% |
| ! | TTCATGACTTTTGAATTAGC+AGG | + | chr1_1:7428338-7428357 | Msa0004980:intron | 30.0% |
| ! | GCTACTATCTTTTACGAAAA+AGG | - | chr1_1:7428442-7428461 | None:intergenic | 30.0% |
| ATTCTTAATCTGTCATGAAC+AGG | - | chr1_1:7428789-7428808 | None:intergenic | 30.0% | |
| TGTTGTCACAAGCAAAAATA+TGG | - | chr1_1:7428958-7428977 | None:intergenic | 30.0% | |
| TCTTTCATGCAAAATCCAAA+TGG | - | chr1_1:7429006-7429025 | None:intergenic | 30.0% | |
| ATTTGCAGTGTTCAAAAGAT+AGG | + | chr1_1:7429025-7429044 | Msa0004980:three_prime_UTR | 30.0% | |
| TTACTAACCGTTTGGACTTT+GGG | + | chr1_1:7424112-7424131 | Msa0004980:five_prime_UTR | 35.0% | |
| GAACAAGACCATAATCGAAA+CGG | + | chr1_1:7424238-7424257 | Msa0004980:CDS | 35.0% | |
| AATGAGATTATGATCCTGTG+TGG | - | chr1_1:7424272-7424291 | None:intergenic | 35.0% | |
| ! | CGATTTTTACTGAGAGGTTT+TGG | - | chr1_1:7424328-7424347 | None:intergenic | 35.0% |
| AAGAGAAAGAGAAAGGCTTT+AGG | + | chr1_1:7424361-7424380 | Msa0004980:CDS | 35.0% | |
| AGAAACCTGTCAATGTTGAT+GGG | - | chr1_1:7424400-7424419 | None:intergenic | 35.0% | |
| AAGAAACCTGTCAATGTTGA+TGG | - | chr1_1:7424401-7424420 | None:intergenic | 35.0% | |
| TACATGGTATATACAGCTGT+AGG | + | chr1_1:7424733-7424752 | Msa0004980:CDS | 35.0% | |
| GTCTAAATTCGTGTAGGATA+GGG | + | chr1_1:7424848-7424867 | Msa0004980:intron | 35.0% | |
| TTTGACGAAGCAAAATCAAG+AGG | - | chr1_1:7425132-7425151 | None:intergenic | 35.0% | |
| ! | TGAATGTCAGAGCATTACTT+GGG | - | chr1_1:7425160-7425179 | None:intergenic | 35.0% |
| ! | TTGAATGTCAGAGCATTACT+TGG | - | chr1_1:7425161-7425180 | None:intergenic | 35.0% |
| AAAACAGGATGCATACGTAA+TGG | - | chr1_1:7425196-7425215 | None:intergenic | 35.0% | |
| ! | ATGCATCCTGTTTTACTTGT+AGG | + | chr1_1:7425202-7425221 | Msa0004980:intron | 35.0% |
| ! | GTGTTCTTTTACTTGTATGG+AGG | + | chr1_1:7425555-7425574 | Msa0004980:intron | 35.0% |
| ! | TATTTTGTGGTGCAAGTTTG+TGG | + | chr1_1:7425601-7425620 | Msa0004980:intron | 35.0% |
| TCCAACCTTACAAATGTTGT+TGG | + | chr1_1:7425747-7425766 | Msa0004980:intron | 35.0% | |
| CCAACCTTACAAATGTTGTT+GGG | + | chr1_1:7425748-7425767 | Msa0004980:intron | 35.0% | |
| GAATGTGAGTCTAATCTAGT+AGG | + | chr1_1:7425911-7425930 | Msa0004980:intron | 35.0% | |
| TTTCATCGTTGTCCCATAAT+TGG | + | chr1_1:7426181-7426200 | Msa0004980:intron | 35.0% | |
| GAAATGTTTCCTTGCGAATT+TGG | + | chr1_1:7426455-7426474 | Msa0004980:intron | 35.0% | |
| ACTCATAATCCAAATTCGCA+AGG | - | chr1_1:7426467-7426486 | None:intergenic | 35.0% | |
| ! | CTTTGCGGATTTTCTAATCT+TGG | + | chr1_1:7426636-7426655 | Msa0004980:intron | 35.0% |
| ! | CAATGCAACACACATTTTAC+TGG | - | chr1_1:7426697-7426716 | None:intergenic | 35.0% |
| TACTCACCTCTTCTTAGAAA+AGG | + | chr1_1:7426792-7426811 | Msa0004980:intron | 35.0% | |
| !! | CTCTAACCTTTTCTAAGAAG+AGG | - | chr1_1:7426801-7426820 | None:intergenic | 35.0% |
| AGTTCAGATTCTACCTGATT+TGG | + | chr1_1:7426819-7426838 | Msa0004980:intron | 35.0% | |
| AGATAAGCATAATCAGGTCA+AGG | - | chr1_1:7426850-7426869 | None:intergenic | 35.0% | |
| GTTGTATTGTATGGTCTTCT+AGG | - | chr1_1:7426880-7426899 | None:intergenic | 35.0% | |
| TGGTTAAAATCTGCAAGGTT+GGG | - | chr1_1:7426935-7426954 | None:intergenic | 35.0% | |
| !! | GTTTCTGGTTAAAATCTGCA+AGG | - | chr1_1:7426940-7426959 | None:intergenic | 35.0% |
| ! | AATATTGGTGTTTATCAGCC+AGG | - | chr1_1:7427003-7427022 | None:intergenic | 35.0% |
| ATGTAGGAGAATCAAACTGA+AGG | + | chr1_1:7427308-7427327 | Msa0004980:intron | 35.0% | |
| AAAGGGTGGCTTACAATATT+AGG | - | chr1_1:7427374-7427393 | None:intergenic | 35.0% | |
| AATATTGTAAGCCACCCTTT+AGG | + | chr1_1:7427374-7427393 | Msa0004980:intron | 35.0% | |
| AGTACAAAATTCCTAAAGGG+TGG | - | chr1_1:7427388-7427407 | None:intergenic | 35.0% | |
| !!! | CTTTTTAAAGCTGTCCGATT+TGG | + | chr1_1:7427663-7427682 | Msa0004980:intron | 35.0% |
| AAATTTGTGACGTGCCAAAT+CGG | - | chr1_1:7427680-7427699 | None:intergenic | 35.0% | |
| AGTAGACTAAGTGTGTGTTT+GGG | + | chr1_1:7427948-7427967 | Msa0004980:intron | 35.0% | |
| GAAGTGAAGTGATTTCTGTT+TGG | + | chr1_1:7428023-7428042 | Msa0004980:intron | 35.0% | |
| ! | AAAGGACTTTTGCATTGAGT+TGG | - | chr1_1:7428102-7428121 | None:intergenic | 35.0% |
| GGACTAAAAGCAACTTTACT+TGG | + | chr1_1:7428152-7428171 | Msa0004980:intron | 35.0% | |
| CTCACAGTTGTAGAAAACAT+AGG | - | chr1_1:7428229-7428248 | None:intergenic | 35.0% | |
| CAATTCCATATATTAGACCG+AGG | + | chr1_1:7428276-7428295 | Msa0004980:intron | 35.0% | |
| ! | AATTTTATGTTCACCTGCCT+CGG | - | chr1_1:7428296-7428315 | None:intergenic | 35.0% |
| AATTAGCAGGCAAAAAGTTC+CGG | + | chr1_1:7428351-7428370 | Msa0004980:intron | 35.0% | |
| AAGTAGGATTGTCAGAAACA+TGG | - | chr1_1:7428710-7428729 | None:intergenic | 35.0% | |
| AGATCATCATCATAGGAAAC+AGG | - | chr1_1:7428813-7428832 | None:intergenic | 35.0% | |
| AAAAAAACGTTCCAGGATGA+AGG | - | chr1_1:7428887-7428906 | None:intergenic | 35.0% | |
| GTGTATGGAAAGAAGAAAGA+AGG | - | chr1_1:7428924-7428943 | None:intergenic | 35.0% | |
| ! | ATGGCTGAAAAAGAAGTGTA+TGG | - | chr1_1:7428939-7428958 | None:intergenic | 35.0% |
| TAGAACGTTGTTGAAAAGTG+TGG | + | chr1_1:7429121-7429140 | Msa0004980:three_prime_UTR | 35.0% | |
| GTTACTAACCGTTTGGACTT+TGG | + | chr1_1:7424111-7424130 | Msa0004980:five_prime_UTR | 40.0% | |
| AGAAGAAGACGATGTTGAGA+TGG | + | chr1_1:7424177-7424196 | Msa0004980:CDS | 40.0% | |
| ! | TGAGATGGTTGATGTTGAAG+AGG | + | chr1_1:7424192-7424211 | Msa0004980:CDS | 40.0% |
| ! | GAGATGGTTGATGTTGAAGA+GGG | + | chr1_1:7424193-7424212 | Msa0004980:CDS | 40.0% |
| TGATGTTGAAGAGGGTGAAT+TGG | + | chr1_1:7424201-7424220 | Msa0004980:CDS | 40.0% | |
| !! | AGAAAGAGAAAGGCTTTAGG+AGG | + | chr1_1:7424364-7424383 | Msa0004980:CDS | 40.0% |
| GGTTTGTGATAGAGACATGT+CGG | + | chr1_1:7424689-7424708 | Msa0004980:intron | 40.0% | |
| ! | CGATATCGTCAAAGAGGTAT+TGG | + | chr1_1:7424780-7424799 | Msa0004980:intron | 40.0% |
| ! | CAACATTGCAAGGAAGTACA+AGG | - | chr1_1:7424808-7424827 | None:intergenic | 40.0% |
| TGCATGGTCTAAATTCGTGT+AGG | + | chr1_1:7424842-7424861 | Msa0004980:intron | 40.0% | |
| GGTCTAAATTCGTGTAGGAT+AGG | + | chr1_1:7424847-7424866 | Msa0004980:intron | 40.0% | |
| CTTTACGATTGTCCAAACTG+CGG | + | chr1_1:7424874-7424893 | Msa0004980:intron | 40.0% | |
| GAAGCAAAATCAAGAGGACT+GGG | - | chr1_1:7425126-7425145 | None:intergenic | 40.0% | |
| GGAGAACCTACAAGTAAAAC+AGG | - | chr1_1:7425211-7425230 | None:intergenic | 40.0% | |
| ! | GTAGGTTCTCCTTTTTACAC+TGG | + | chr1_1:7425220-7425239 | Msa0004980:intron | 40.0% |
| ACACAATCAAAAGAACACCG+AGG | - | chr1_1:7425262-7425281 | None:intergenic | 40.0% | |
| CAAGTATTCGGAAGTAAGAC+AGG | - | chr1_1:7425493-7425512 | None:intergenic | 40.0% | |
| ! | AAGGAGCACATGCAAGTATT+CGG | - | chr1_1:7425505-7425524 | None:intergenic | 40.0% |
| CATTTGTAAGGTTGGAACCA+AGG | - | chr1_1:7425743-7425762 | None:intergenic | 40.0% | |
| CCCAACAACATTTGTAAGGT+TGG | - | chr1_1:7425751-7425770 | None:intergenic | 40.0% | |
| AATAAGGACTTGGGAAAAGG+AGG | - | chr1_1:7426048-7426067 | None:intergenic | 40.0% | |
| ! | ATTGGTCTCTGAATAGTAGC+AGG | - | chr1_1:7426112-7426131 | None:intergenic | 40.0% |
| ! | GTGAAGTGAGTGCTGTATAA+TGG | + | chr1_1:7426226-7426245 | Msa0004980:intron | 40.0% |
| !! | GCATACTAAAGAAGCATTGC+TGG | - | chr1_1:7426256-7426275 | None:intergenic | 40.0% |
| !! | TTCTAATCTTGGCTTGTCAC+TGG | + | chr1_1:7426647-7426666 | Msa0004980:intron | 40.0% |
| TCCCTTTATTGATGGGAATG+TGG | + | chr1_1:7426746-7426765 | Msa0004980:intron | 40.0% | |
| GCCACATTCCCATCAATAAA+GGG | - | chr1_1:7426750-7426769 | None:intergenic | 40.0% | |
| TGCCACATTCCCATCAATAA+AGG | - | chr1_1:7426751-7426770 | None:intergenic | 40.0% | |
| CTGGTTAAAATCTGCAAGGT+TGG | - | chr1_1:7426936-7426955 | None:intergenic | 40.0% | |
| GAGACAGCCCTAATATATGT+AGG | + | chr1_1:7427292-7427311 | Msa0004980:intron | 40.0% | |
| ! | TACTTGCTGATCAAGCAGTA+AGG | + | chr1_1:7427404-7427423 | Msa0004980:intron | 40.0% |
| TCAAGCAGTAAGGACTTTGT+TGG | + | chr1_1:7427414-7427433 | Msa0004980:intron | 40.0% | |
| GAAAAAAGCAAGAGAGTTCG+AGG | + | chr1_1:7427847-7427866 | Msa0004980:CDS | 40.0% | |
| TGTTCCATTAAGTGCATCGA+CGG | + | chr1_1:7427922-7427941 | Msa0004980:intron | 40.0% | |
| CAGTAGACTAAGTGTGTGTT+TGG | + | chr1_1:7427947-7427966 | Msa0004980:intron | 40.0% | |
| ATTAGCAGGCAAAAAGTTCC+GGG | + | chr1_1:7428352-7428371 | Msa0004980:intron | 40.0% | |
| ! | AACCAAGACTGCTGTTTAGA+TGG | + | chr1_1:7428406-7428425 | Msa0004980:intron | 40.0% |
| AACCATCTAAACAGCAGTCT+TGG | - | chr1_1:7428411-7428430 | None:intergenic | 40.0% | |
| ATGGATGCCTGCTTAAAACT+TGG | - | chr1_1:7428627-7428646 | None:intergenic | 40.0% | |
| ! | AGAATCCTCCTCTTTTTGCA+TGG | - | chr1_1:7428646-7428665 | None:intergenic | 40.0% |
| TGCGCACTAGAAAATGTACA+AGG | - | chr1_1:7428681-7428700 | None:intergenic | 40.0% | |
| !! | TACATTTTCTAGTGCGCATC+AGG | + | chr1_1:7428683-7428702 | Msa0004980:CDS | 40.0% |
| !! | ACATTTTCTAGTGCGCATCA+GGG | + | chr1_1:7428684-7428703 | Msa0004980:CDS | 40.0% |
| ! | ACAGGAACACGTTTCTTTTC+AGG | - | chr1_1:7428771-7428790 | None:intergenic | 40.0% |
| ! | TCCTATGATGATGATCTGCT+TGG | + | chr1_1:7428816-7428835 | Msa0004980:CDS | 40.0% |
| TCCAAGCAGATCATCATCAT+AGG | - | chr1_1:7428820-7428839 | None:intergenic | 40.0% | |
| TGATGTAACCTTGCCTTGAA+TGG | + | chr1_1:7428854-7428873 | Msa0004980:exon | 40.0% | |
| ACCTTGCCTTGAATGGAAAA+AGG | + | chr1_1:7428861-7428880 | Msa0004980:exon | 40.0% | |
| ! | TGAAGGCCTTTTTCCATTCA+AGG | - | chr1_1:7428870-7428889 | None:intergenic | 40.0% |
| TGCTTGTGACAACAAGTTCA+CGG | + | chr1_1:7428964-7428983 | Msa0004980:three_prime_UTR | 40.0% | |
| ! | ACGTTGTTGAAAAGTGTGGT+TGG | + | chr1_1:7429125-7429144 | Msa0004980:three_prime_UTR | 40.0% |
| CTCGAGAGTTACTAACCGTT+TGG | + | chr1_1:7424104-7424123 | Msa0004980:five_prime_UTR | 45.0% | |
| GAGATTATGATCCTGTGTGG+CGG | - | chr1_1:7424269-7424288 | None:intergenic | 45.0% | |
| ! | CGCTTCCGATTTTTACTGAG+AGG | - | chr1_1:7424334-7424353 | None:intergenic | 45.0% |
| !! | GAGAAAGGCTTTAGGAGGAT+CGG | + | chr1_1:7424369-7424388 | Msa0004980:CDS | 45.0% |
| ATGCACCCATCAACATTGAC+AGG | + | chr1_1:7424392-7424411 | Msa0004980:CDS | 45.0% | |
| TATACAGCTGTAGGTTGCCT+TGG | + | chr1_1:7424742-7424761 | Msa0004980:CDS | 45.0% | |
| ATACAGCTGTAGGTTGCCTT+GGG | + | chr1_1:7424743-7424762 | Msa0004980:CDS | 45.0% | |
| GTTGAGCGATATCGTCAAAG+AGG | + | chr1_1:7424774-7424793 | Msa0004980:CDS | 45.0% | |
| CGAAGCAAAATCAAGAGGAC+TGG | - | chr1_1:7425127-7425146 | None:intergenic | 45.0% | |
| GATATTTGGGGGTGAGTTTG+AGG | + | chr1_1:7425298-7425317 | Msa0004980:intron | 45.0% | |
| TGTGGTGTTTGCCTTGTGTA+TGG | + | chr1_1:7425619-7425638 | Msa0004980:intron | 45.0% | |
| TAGCCACTTCAACCTCTCTT+GGG | + | chr1_1:7425704-7425723 | Msa0004980:intron | 45.0% | |
| TAAGGTTGGAACCAAGGTTG+AGG | - | chr1_1:7425737-7425756 | None:intergenic | 45.0% | |
| AGTAGCAGGACAAGTCACAA+AGG | - | chr1_1:7426098-7426117 | None:intergenic | 45.0% | |
| CAGCACTCACTTCACTTCAA+TGG | - | chr1_1:7426221-7426240 | None:intergenic | 45.0% | |
| ! | GTCTTTGCACTCACGTTTTG+TGG | + | chr1_1:7426283-7426302 | Msa0004980:intron | 45.0% |
| !!! | GATAAGGTTTTAGGCGCAGA+AGG | - | chr1_1:7426603-7426622 | None:intergenic | 45.0% |
| TTACTGGGAGATGAAGAGAG+AGG | - | chr1_1:7426681-7426700 | None:intergenic | 45.0% | |
| TGGGAATGTGGCATTGTTTG+AGG | + | chr1_1:7426758-7426777 | Msa0004980:intron | 45.0% | |
| ! | GGAAGGAGCAAACTAGTTTC+TGG | - | chr1_1:7426955-7426974 | None:intergenic | 45.0% |
| !! | AAGGAACAATTGATGGCGCT+AGG | + | chr1_1:7427243-7427262 | Msa0004980:intron | 45.0% |
| CTGCTGATGGTAAGCGATTT+CGG | + | chr1_1:7427759-7427778 | Msa0004980:CDS | 45.0% | |
| ATGGTAAGCGATTTCGGACA+GGG | + | chr1_1:7427765-7427784 | Msa0004980:CDS | 45.0% | |
| TCCATATATTAGACCGAGGC+AGG | + | chr1_1:7428280-7428299 | Msa0004980:intron | 45.0% | |
| ACCTGCCTCGGTCTAATATA+TGG | - | chr1_1:7428284-7428303 | None:intergenic | 45.0% | |
| ! | GACTGCTGTTTAGATGGTTC+CGG | + | chr1_1:7428412-7428431 | Msa0004980:intron | 45.0% |
| ! | ACTGCTGTTTAGATGGTTCC+GGG | + | chr1_1:7428413-7428432 | Msa0004980:intron | 45.0% |
| ! | CTTTTACGAAAAAGGCAGCC+CGG | - | chr1_1:7428434-7428453 | None:intergenic | 45.0% |
| AGAGGAGGATTCTTCTCAAG+AGG | + | chr1_1:7428653-7428672 | Msa0004980:CDS | 45.0% | |
| CAAGATCAAGATAAACCGCC+AGG | + | chr1_1:7428744-7428763 | Msa0004980:CDS | 45.0% | |
| !! | ACACGTTTCTTTTCAGGACC+TGG | - | chr1_1:7428765-7428784 | None:intergenic | 45.0% |
| ! | GCCTTTTTCCATTCAAGGCA+AGG | - | chr1_1:7428865-7428884 | None:intergenic | 45.0% |
| ATGGAAAAAGGCCTTCATCC+TGG | + | chr1_1:7428873-7428892 | Msa0004980:three_prime_UTR | 45.0% | |
| TGTGACAACAAGTTCACGGA+TGG | + | chr1_1:7428968-7428987 | Msa0004980:three_prime_UTR | 45.0% | |
| TGGAGCAGTATGGTTCCATT+TGG | + | chr1_1:7428988-7429007 | Msa0004980:three_prime_UTR | 45.0% | |
| !! | AATAAAAATATGATATATTT+AGG | - | chr1_1:7427108-7427127 | None:intergenic | 5.0% |
| AACCGTTTGGACTTTGGGCA+TGG | + | chr1_1:7424117-7424136 | Msa0004980:exon | 50.0% | |
| CTCCATGCCCAAAGTCCAAA+CGG | - | chr1_1:7424122-7424141 | None:intergenic | 50.0% | |
| GTTTGGACTTTGGGCATGGA+GGG | + | chr1_1:7424121-7424140 | Msa0004980:exon | 50.0% | |
| TTGCAATTGCAGCCGCAGTT+TGG | - | chr1_1:7424889-7424908 | None:intergenic | 50.0% | |
| GGTGTTTGCCTTGTGTATGG+TGG | + | chr1_1:7425622-7425641 | Msa0004980:intron | 50.0% | |
| GCAGAGAACCACCATACACA+AGG | - | chr1_1:7425633-7425652 | None:intergenic | 50.0% | |
| GTAGCCACTTCAACCTCTCT+TGG | + | chr1_1:7425703-7425722 | Msa0004980:intron | 50.0% | |
| AGCCACTTCAACCTCTCTTG+GGG | + | chr1_1:7425705-7425724 | Msa0004980:intron | 50.0% | |
| GGACTTGGGAAAAGGAGGAA+AGG | - | chr1_1:7426043-7426062 | None:intergenic | 50.0% | |
| GCAGGACAAGTCACAAAGGA+AGG | - | chr1_1:7426094-7426113 | None:intergenic | 50.0% | |
| CGTGAGTGCAAAGACAGATG+AGG | - | chr1_1:7426278-7426297 | None:intergenic | 50.0% | |
| !!! | GGTTTTAGGCGCAGAAGGAA+AGG | - | chr1_1:7426598-7426617 | None:intergenic | 50.0% |
| GGTCAAGGCTGAACCAAATC+AGG | - | chr1_1:7426835-7426854 | None:intergenic | 50.0% | |
| GTAGACGCAATACAGTCCTG+TGG | + | chr1_1:7427725-7427744 | Msa0004980:CDS | 50.0% | |
| GATGGTAAGCGATTTCGGAC+AGG | + | chr1_1:7427764-7427783 | Msa0004980:CDS | 50.0% | |
| TGGTAAGCGATTTCGGACAG+GGG | + | chr1_1:7427766-7427785 | Msa0004980:CDS | 50.0% | |
| TGTGCCGTCGATGCACTTAA+TGG | - | chr1_1:7427929-7427948 | None:intergenic | 50.0% | |
| !!! | CAGGCAGCCAAGTTTTAAGC+AGG | + | chr1_1:7428617-7428636 | Msa0004980:CDS | 50.0% |
| GCAGGCATCCATGCAAAAAG+AGG | + | chr1_1:7428635-7428654 | Msa0004980:CDS | 50.0% | |
| GGCATCCATGCAAAAAGAGG+AGG | + | chr1_1:7428638-7428657 | Msa0004980:CDS | 50.0% | |
| TGCATTTGCGATGCGCAAGT+AGG | - | chr1_1:7428726-7428745 | None:intergenic | 50.0% | |
| !! | CGTTTCTTTTCAGGACCTGG+CGG | - | chr1_1:7428762-7428781 | None:intergenic | 50.0% |
| AGTTCACGGATGGAGCAGTA+TGG | + | chr1_1:7428978-7428997 | Msa0004980:three_prime_UTR | 50.0% | |
| CGTTTGGACTTTGGGCATGG+AGG | + | chr1_1:7424120-7424139 | Msa0004980:exon | 55.0% | |
| CGGCGACACCGTTTCGATTA+TGG | - | chr1_1:7424249-7424268 | None:intergenic | 55.0% | |
| CGCTCAACGCAGAAATCCCA+AGG | - | chr1_1:7424762-7424781 | None:intergenic | 55.0% | |
| CACCCCAAGAGAGGTTGAAG+TGG | - | chr1_1:7425710-7425729 | None:intergenic | 55.0% | |
| CACTTCAACCTCTCTTGGGG+TGG | + | chr1_1:7425708-7425727 | Msa0004980:intron | 55.0% | |
| TGAGGAAACCACCCCAAGAG+AGG | - | chr1_1:7425719-7425738 | None:intergenic | 55.0% | |
| TGGGGTGGTTTCCTCAACCT+TGG | + | chr1_1:7425723-7425742 | Msa0004980:intron | 55.0% | |
| GACGCAATACAGTCCTGTGG+AGG | + | chr1_1:7427728-7427747 | Msa0004980:CDS | 55.0% | |
| GCTTACCATCAGCAGTCTGC+TGG | - | chr1_1:7427754-7427773 | None:intergenic | 55.0% | |
| GGTAAGCGATTTCGGACAGG+GGG | + | chr1_1:7427767-7427786 | Msa0004980:CDS | 55.0% | |
| TGGACTTTGGGCATGGAGGG+TGG | + | chr1_1:7424124-7424143 | Msa0004980:exon | 60.0% | |
| AAGCGATTTCGGACAGGGGG+TGG | + | chr1_1:7427770-7427789 | Msa0004980:CDS | 60.0% | |
| GGACAGGGGGTGGTGTATTG+TGG | + | chr1_1:7427780-7427799 | Msa0004980:CDS | 60.0% | |
| !! | AAACGGTGTCGCCGCCACAC+AGG | + | chr1_1:7424255-7424274 | Msa0004980:CDS | 65.0% |
| ! | AGCAGTCTGCTGGCCTCCAC+AGG | - | chr1_1:7427744-7427763 | None:intergenic | 65.0% |
| GGAGGCCAGCAGACTGCTGA+TGG | + | chr1_1:7427746-7427765 | Msa0004980:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 7424099 | 7429174 | 7424099 | ID=Msa0004980;Name=Msa0004980 |
| chr1_1 | mRNA | 7424099 | 7429174 | 7424099 | ID=Msa0004980-mRNA-1;Parent=Msa0004980;Name=Msa0004980-mRNA-1;_AED=0.07;_eAED=0.07;_QI=37|1|1|1|1|1|4|302|263 |
| chr1_1 | exon | 7424099 | 7424413 | 7424099 | ID=Msa0004980-mRNA-1:exon:2598;Parent=Msa0004980-mRNA-1 |
| chr1_1 | exon | 7424690 | 7424795 | 7424690 | ID=Msa0004980-mRNA-1:exon:2599;Parent=Msa0004980-mRNA-1 |
| chr1_1 | exon | 7427725 | 7427868 | 7427725 | ID=Msa0004980-mRNA-1:exon:2600;Parent=Msa0004980-mRNA-1 |
| chr1_1 | exon | 7428609 | 7429174 | 7428609 | ID=Msa0004980-mRNA-1:exon:2601;Parent=Msa0004980-mRNA-1 |
| chr1_1 | five_prime_UTR | 7424099 | 7424135 | 7424099 | ID=Msa0004980-mRNA-1:five_prime_utr;Parent=Msa0004980-mRNA-1 |
| chr1_1 | CDS | 7424136 | 7424413 | 7424136 | ID=Msa0004980-mRNA-1:cds;Parent=Msa0004980-mRNA-1 |
| chr1_1 | CDS | 7424690 | 7424795 | 7424690 | ID=Msa0004980-mRNA-1:cds;Parent=Msa0004980-mRNA-1 |
| chr1_1 | CDS | 7427725 | 7427868 | 7427725 | ID=Msa0004980-mRNA-1:cds;Parent=Msa0004980-mRNA-1 |
| chr1_1 | CDS | 7428609 | 7428872 | 7428609 | ID=Msa0004980-mRNA-1:cds;Parent=Msa0004980-mRNA-1 |
| chr1_1 | three_prime_UTR | 7428873 | 7429174 | 7428873 | ID=Msa0004980-mRNA-1:three_prime_utr;Parent=Msa0004980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
