AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0241780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0241780 MtrunA17_Chr2g0293491 76.190 294 12 2 1 236 1 294 1.51e-153 428
Msa0241780 MtrunA17_Chr4g0051261 89.394 132 14 0 105 236 163 294 2.03e-87 260
Msa0241780 MtrunA17_Chr4g0051261 93.396 106 7 0 1 106 1 106 3.58e-63 199
Msa0241780 MtrunA17_Chr8g0358921 37.288 295 122 4 1 232 44 338 1.37e-58 189
Msa0241780 MtrunA17_Chr6g0483151 38.028 284 119 5 2 229 12 294 3.95e-52 174
Msa0241780 MtrunA17_Chr4g0002001 57.031 128 54 1 105 232 180 306 4.65e-50 166
Msa0241780 MtrunA17_Chr4g0002001 55.660 106 34 2 1 93 1 106 1.97e-27 106
Msa0241780 MtrunA17_Chr1g0187371 54.688 128 57 1 105 232 185 311 1.25e-49 164
Msa0241780 MtrunA17_Chr1g0187371 48.624 109 43 3 2 104 16 117 2.54e-24 98.6
Msa0241780 MtrunA17_Chr8g0369451 32.082 293 139 6 1 236 1 290 1.12e-47 163
Msa0241780 MtrunA17_Chr5g0409421 31.399 293 141 5 1 236 1 290 3.46e-46 159
Msa0241780 MtrunA17_Chr3g0099951 33.448 290 132 6 2 232 12 299 1.39e-45 156
Msa0241780 MtrunA17_Chr4g0057791 34.333 300 127 9 1 231 215 513 2.81e-45 158
Msa0241780 MtrunA17_Chr8g0377071 35.314 303 120 9 1 232 382 679 3.27e-44 157
Msa0241780 MtrunA17_Chr8g0360761 40.933 193 97 3 39 230 9 185 4.68e-44 146
Msa0241780 MtrunA17_Chr3g0122781 33.648 318 120 8 1 232 413 725 3.32e-41 149
Msa0241780 MtrunA17_Chr8g0339221 31.058 293 143 5 1 236 1 291 1.34e-39 141
Msa0241780 MtrunA17_Chr4g0030151 30.556 288 137 6 10 235 45 331 3.36e-38 136
Msa0241780 MtrunA17_Chr3g0141871 28.716 296 141 4 3 232 31 322 5.11e-38 135
Msa0241780 MtrunA17_Chr4g0045841 29.268 287 135 6 10 232 61 343 5.35e-35 128
Msa0241780 MtrunA17_Chr8g0387401 29.553 291 136 6 7 232 55 341 2.51e-34 126
Msa0241780 MtrunA17_Chr6g0453711 29.932 294 145 5 2 235 108 400 3.36e-34 129
Msa0241780 MtrunA17_Chr8g0378831 29.630 297 137 7 3 232 31 322 4.40e-34 125
Msa0241780 MtrunA17_Chr3g0093571 48.413 126 64 1 105 229 199 324 1.31e-33 126
Msa0241780 MtrunA17_Chr3g0093571 47.000 100 37 1 4 87 25 124 3.77e-22 94.4
Msa0241780 MtrunA17_Chr3g0093391 47.619 126 65 1 105 229 197 322 2.34e-33 125
Msa0241780 MtrunA17_Chr3g0093391 45.000 100 39 1 4 87 23 122 8.49e-21 90.5
Msa0241780 MtrunA17_Chr2g0317501 30.479 292 134 8 2 229 132 418 3.54e-33 126
Msa0241780 MtrunA17_Chr4g0030231 28.866 291 138 6 7 232 43 329 4.08e-33 123
Msa0241780 MtrunA17_Chr7g0248461 28.125 288 138 7 7 229 41 324 4.29e-33 123
Msa0241780 MtrunA17_Chr3g0130781 45.000 140 61 4 106 230 191 329 3.11e-32 122
Msa0241780 MtrunA17_Chr3g0130781 46.739 92 44 2 1 87 15 106 1.12e-18 84.3
Msa0241780 MtrunA17_Chr8g0383451 31.802 283 126 6 10 230 4 281 3.96e-32 122
Msa0241780 MtrunA17_Chr8g0348481 27.083 288 141 6 7 229 40 323 7.05e-32 119
Msa0241780 MtrunA17_Chr5g0397261 29.167 288 135 7 10 232 47 330 1.09e-30 116
Msa0241780 MtrunA17_Chr3g0102571 42.969 128 72 1 106 232 242 369 2.10e-30 116
Msa0241780 MtrunA17_Chr3g0102571 39.175 97 54 1 3 94 31 127 7.75e-14 70.1
Msa0241780 MtrunA17_Chr7g0218071 30.169 295 144 9 2 235 118 411 4.83e-30 117
Msa0241780 MtrunA17_Chr2g0286421 36.571 175 102 5 56 229 220 386 2.22e-29 115
Msa0241780 MtrunA17_Chr2g0286421 48.315 89 42 3 2 87 100 187 7.16e-16 76.3
Msa0241780 MtrunA17_Chr3g0131861 41.270 126 72 2 105 229 257 381 2.91e-28 112
Msa0241780 MtrunA17_Chr3g0131861 49.425 87 40 3 4 87 97 182 8.55e-16 75.9
Msa0241780 MtrunA17_Chr5g0396361 41.667 132 75 2 99 229 294 424 3.03e-28 112
Msa0241780 MtrunA17_Chr5g0396361 43.182 88 48 1 2 87 138 225 4.12e-15 73.9
Msa0241780 MtrunA17_Chr8g0385971 38.816 152 88 3 79 229 227 374 6.35e-28 110
Msa0241780 MtrunA17_Chr8g0385971 45.349 86 45 1 4 87 90 175 2.24e-16 77.8
Msa0241780 MtrunA17_Chr4g0061141 35.795 176 104 4 56 230 223 390 1.04e-27 110
Msa0241780 MtrunA17_Chr4g0061141 37.963 108 62 4 2 106 103 208 4.98e-13 68.2
Msa0241780 MtrunA17_Chr6g0486031 39.062 128 76 2 106 231 275 402 1.75e-27 108
Msa0241780 MtrunA17_Chr4g0040141 36.601 153 90 4 79 229 266 413 2.36e-27 109
Msa0241780 MtrunA17_Chr4g0040141 41.860 86 48 1 4 87 129 214 1.47e-15 75.5
Msa0241780 MtrunA17_Chr8g0390341 38.281 128 77 2 106 231 288 415 5.43e-27 107
Msa0241780 MtrunA17_Chr4g0066691 39.394 132 78 2 99 229 258 388 2.95e-26 106
Msa0241780 MtrunA17_Chr4g0066691 40.741 108 59 4 2 106 102 207 2.77e-15 74.7
Msa0241780 MtrunA17_Chr7g0273601 34.868 152 94 4 79 229 244 391 3.05e-26 106
Msa0241780 MtrunA17_Chr7g0273601 44.944 89 45 3 2 87 105 192 3.79e-15 74.3
Msa0241780 MtrunA17_Chr1g0191221 37.879 132 80 2 99 229 276 406 3.96e-26 105
Msa0241780 MtrunA17_Chr1g0191221 42.593 108 57 4 2 106 120 225 2.99e-15 74.3
Msa0241780 MtrunA17_Chr2g0320011 25.086 291 143 9 10 233 94 376 5.21e-26 104
Msa0241780 MtrunA17_Chr2g0284091 25.773 291 141 9 10 233 46 328 6.54e-26 103
Msa0241780 MtrunA17_Chr2g0324461 41.353 133 70 3 101 229 297 425 8.28e-26 105
Msa0241780 MtrunA17_Chr2g0324461 40.698 86 49 1 4 87 141 226 1.54e-15 75.5
Msa0241780 MtrunA17_Chr8g0359091 30.000 300 142 7 3 235 25 323 5.38e-25 102
Msa0241780 MtrunA17_Chr5g0443351 30.303 297 139 7 3 232 21 316 6.25e-25 102
Msa0241780 MtrunA17_Chr2g0287271 29.000 300 145 7 3 235 24 322 8.63e-24 99.4
Msa0241780 MtrunA17_Chr1g0201571 28.276 290 141 7 2 229 124 408 9.86e-24 99.4
Msa0241780 MtrunA17_Chr4g0065851 28.767 292 140 7 8 232 29 319 1.01e-23 99.0
Msa0241780 MtrunA17_Chr3g0102601 30.846 201 124 5 47 232 7 207 2.10e-23 94.7
Msa0241780 MtrunA17_Chr7g0246591 35.294 136 84 3 100 233 296 429 3.12e-23 97.4
Msa0241780 MtrunA17_Chr3g0102581 28.311 219 138 5 3 212 5 213 4.93e-23 93.2
Msa0241780 MtrunA17_Chr3g0096631 30.000 300 142 7 3 235 24 322 1.76e-22 95.5
Msa0241780 MtrunA17_Chr8g0350311 32.192 146 75 2 100 233 294 427 8.07e-22 93.2
Msa0241780 MtrunA17_Chr1g0193081 33.088 136 87 3 100 233 230 363 3.06e-21 91.3
Msa0241780 MtrunA17_Chr7g0270371 25.263 285 150 10 10 233 81 363 1.90e-20 89.0
Msa0241780 MtrunA17_Chr2g0277011 30.070 143 82 2 100 233 245 378 2.68e-20 88.6
Msa0241780 MtrunA17_Chr1g0194201 24.399 291 157 8 4 233 75 363 4.87e-20 87.8
Msa0241780 MtrunA17_Chr4g0030241 53.968 63 29 0 106 168 62 124 1.84e-18 80.1
Msa0241780 MtrunA17_Chr8g0392811 34.328 134 83 3 106 235 282 414 3.91e-18 82.8
Msa0241780 MtrunA17_Chr6g0482681 36.567 134 80 3 106 235 254 386 1.03e-15 75.9
Msa0241780 MtrunA17_Chr4g0053821 30.000 140 89 3 103 233 239 378 1.68e-15 74.7
Msa0241780 MtrunA17_Chr4g0053951 31.206 141 86 4 103 233 270 409 2.88e-15 74.3
Msa0241780 MtrunA17_Chr5g0401371 29.078 141 89 4 103 233 265 404 2.29e-14 71.6
Msa0241780 MtrunA17_Chr8g0378871 33.673 98 63 1 134 229 6 103 4.34e-14 67.8
Msa0241780 MtrunA17_Chr2g0314321 34.211 152 70 4 106 232 190 336 2.59e-13 68.9
Msa0241780 MtrunA17_Chr3g0139371 31.013 158 88 4 93 230 243 399 2.75e-13 68.6
Msa0241780 MtrunA17_Chr1g0205421 28.293 205 88 7 1 146 9 213 8.02e-13 67.0
Msa0241780 MtrunA17_Chr8g0369241 26.484 219 92 6 10 163 145 359 9.67e-13 67.4
Msa0241780 MtrunA17_Chr3g0116701 30.625 160 84 6 93 229 264 419 1.19e-11 63.5
Msa0241780 MtrunA17_Chr4g0058241 31.973 147 73 6 106 229 281 423 2.77e-11 62.8
Msa0241780 MtrunA17_Chr5g0419441 40.741 81 45 2 3 82 238 316 2.88e-11 62.8
Msa0241780 MtrunA17_Chr3g0107011 39.759 83 49 1 1 82 11 93 5.17e-11 62.0
Msa0241780 MtrunA17_Chr8g0392821 31.429 105 58 2 123 227 47 137 7.55e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0241780 AT3G48750.1 63.605 294 49 2 1 236 1 294 2.74e-127 362
Msa0241780 AT3G54180.1 43.934 305 97 6 1 232 1 304 1.57e-78 239
Msa0241780 AT1G76540.1 41.275 298 108 6 1 232 11 307 3.35e-77 235
Msa0241780 AT2G38620.4 44.578 249 116 5 1 232 1 244 2.11e-67 208
Msa0241780 AT5G63370.2 37.294 303 119 5 1 232 160 462 7.81e-59 193
Msa0241780 AT5G63370.3 37.294 303 119 5 1 232 160 462 7.81e-59 193
Msa0241780 AT5G63370.7 37.294 303 119 5 1 232 294 596 1.58e-57 192
Msa0241780 AT5G63370.8 37.294 303 119 5 1 232 294 596 1.58e-57 192
Msa0241780 AT5G63370.4 37.294 303 119 5 1 232 294 596 1.58e-57 192
Msa0241780 AT5G63370.6 37.294 303 119 5 1 232 294 596 1.58e-57 192
Msa0241780 AT5G63370.1 37.294 303 119 5 1 232 294 596 1.58e-57 192
Msa0241780 AT1G66750.1 39.298 285 116 5 1 229 10 293 7.98e-57 184
Msa0241780 AT1G73690.1 38.028 284 119 5 2 229 9 291 8.81e-56 183
Msa0241780 AT1G18040.1 37.324 284 121 6 2 229 10 292 1.38e-52 174
Msa0241780 AT1G20930.1 57.812 128 53 1 105 232 183 309 3.79e-52 171
Msa0241780 AT1G20930.1 47.458 118 56 2 1 112 13 130 1.53e-24 99.4
Msa0241780 AT2G38620.2 57.812 128 53 1 105 232 180 306 6.86e-52 171
Msa0241780 AT2G38620.2 56.604 106 33 3 1 93 1 106 3.53e-26 103
Msa0241780 AT5G63370.9 37.903 248 91 4 3 187 162 409 7.18e-49 166
Msa0241780 AT1G67580.1 34.333 300 127 8 1 232 403 700 2.29e-48 169
Msa0241780 AT1G67580.2 34.333 300 127 8 1 232 403 700 2.29e-48 169
Msa0241780 AT5G63370.5 37.600 250 93 4 1 187 294 543 2.05e-47 164
Msa0241780 AT5G63370.10 37.600 250 93 4 1 187 294 543 2.05e-47 164
Msa0241780 AT5G50860.2 34.843 287 124 8 4 229 114 398 4.10e-44 155
Msa0241780 AT5G50860.1 34.843 287 124 8 4 229 114 398 1.48e-43 154
Msa0241780 AT4G22940.1 31.849 292 133 6 2 230 101 389 6.76e-42 148
Msa0241780 AT4G13020.7 32.168 286 134 5 1 229 1 283 8.39e-42 146
Msa0241780 AT4G13020.6 32.168 286 134 5 1 229 1 283 1.36e-41 146
Msa0241780 AT4G13020.4 32.168 286 134 5 1 229 1 283 1.66e-41 146
Msa0241780 AT4G13020.1 32.168 286 134 5 1 229 1 283 2.40e-41 146
Msa0241780 AT4G22940.2 31.959 291 132 6 3 230 102 389 3.22e-41 148
Msa0241780 AT4G13020.2 31.707 287 136 5 1 230 9 292 3.09e-40 143
Msa0241780 AT4G13020.3 31.707 287 136 5 1 230 9 292 3.14e-40 143
Msa0241780 AT5G45430.1 29.530 298 140 6 1 236 1 290 6.99e-40 143
Msa0241780 AT5G45430.2 29.530 298 140 6 1 236 1 290 7.94e-40 143
Msa0241780 AT4G13020.8 30.508 295 136 5 1 229 1 292 2.32e-39 140
Msa0241780 AT4G13020.5 30.508 295 136 5 1 229 1 292 6.76e-39 140
Msa0241780 AT4G19110.2 28.188 298 144 6 1 236 1 290 9.23e-39 140
Msa0241780 AT4G19110.1 28.188 298 144 6 1 236 1 290 1.00e-38 140
Msa0241780 AT3G45640.1 30.877 285 134 6 10 232 44 327 1.42e-38 137
Msa0241780 AT3G59790.1 31.488 289 135 6 7 232 63 351 1.62e-38 138
Msa0241780 AT2G46070.1 28.521 284 142 5 7 229 44 327 8.97e-36 130
Msa0241780 AT1G59580.2 28.669 293 139 4 3 229 31 319 9.24e-36 130
Msa0241780 AT1G59580.1 28.669 293 139 4 3 229 31 319 9.24e-36 130
Msa0241780 AT2G46070.3 28.521 284 142 5 7 229 78 361 1.40e-35 130
Msa0241780 AT2G18170.1 28.716 296 141 5 3 232 31 322 6.16e-35 128
Msa0241780 AT1G10210.2 28.328 293 140 4 3 229 31 319 6.19e-35 128
Msa0241780 AT1G10210.3 28.328 293 140 4 3 229 31 319 6.19e-35 128
Msa0241780 AT1G10210.1 28.328 293 140 4 3 229 31 319 6.19e-35 128
Msa0241780 AT2G43790.1 29.268 287 135 6 10 232 69 351 1.57e-34 127
Msa0241780 AT5G63610.1 47.482 139 59 3 106 230 196 334 2.72e-34 128
Msa0241780 AT5G63610.1 46.667 90 45 2 1 87 22 111 8.45e-17 79.3
Msa0241780 AT2G46070.2 28.467 274 135 5 7 219 44 317 6.75e-34 124
Msa0241780 AT5G39420.1 30.450 289 138 7 2 229 103 389 3.62e-33 126
Msa0241780 AT4G11330.1 29.514 288 134 7 7 229 46 329 4.31e-33 123
Msa0241780 AT3G01085.3 31.724 290 134 8 2 229 113 400 1.48e-32 124
Msa0241780 AT3G01085.1 31.724 290 134 8 2 229 113 400 2.37e-32 124
Msa0241780 AT3G01085.2 31.724 290 134 8 2 229 113 400 2.37e-32 124
Msa0241780 AT5G10270.1 44.444 126 69 1 105 229 200 325 2.63e-32 123
Msa0241780 AT5G10270.1 47.000 100 37 1 4 87 26 125 4.72e-22 94.4
Msa0241780 AT5G64960.1 43.750 128 67 2 105 229 200 325 4.31e-32 122
Msa0241780 AT5G64960.1 47.000 100 37 1 4 87 26 125 7.18e-22 94.0
Msa0241780 AT5G64960.2 43.750 128 67 2 105 229 147 272 4.54e-32 122
Msa0241780 AT1G57700.1 30.508 295 140 7 2 234 144 435 4.64e-32 123
Msa0241780 AT4G36450.1 29.392 296 136 7 3 232 31 319 8.44e-32 119
Msa0241780 AT4G19110.3 36.478 159 95 2 79 236 81 234 9.43e-32 120
Msa0241780 AT4G10010.1 43.077 130 72 2 101 229 132 260 5.32e-29 114
Msa0241780 AT4G01370.1 27.758 281 142 6 10 229 49 329 1.02e-28 111
Msa0241780 AT4G10010.2 43.077 130 72 2 101 229 312 440 2.58e-28 112
Msa0241780 AT4G10010.2 43.182 88 48 1 2 87 154 241 1.82e-15 75.5
Msa0241780 AT5G44290.7 40.441 136 79 2 101 235 293 427 4.88e-28 111
Msa0241780 AT5G44290.7 43.023 86 47 1 4 87 137 222 5.65e-16 77.0
Msa0241780 AT1G03740.2 40.152 132 75 2 106 235 374 503 5.74e-28 112
Msa0241780 AT1G03740.2 43.023 86 47 1 4 87 213 298 7.71e-16 76.6
Msa0241780 AT1G03740.1 40.152 132 75 2 106 235 374 503 5.80e-28 112
Msa0241780 AT1G03740.1 43.023 86 47 1 4 87 213 298 9.13e-16 76.6
Msa0241780 AT1G09600.1 41.667 132 75 2 99 229 317 447 6.16e-28 112
Msa0241780 AT1G09600.1 39.252 107 62 2 2 106 161 266 3.51e-16 77.8
Msa0241780 AT5G44290.2 40.441 136 79 2 101 235 293 427 6.34e-28 111
Msa0241780 AT5G44290.2 43.023 86 47 1 4 87 137 222 8.19e-16 76.6
Msa0241780 AT5G44290.5 40.441 136 79 2 101 235 293 427 6.34e-28 111
Msa0241780 AT5G44290.5 43.023 86 47 1 4 87 137 222 8.19e-16 76.6
Msa0241780 AT5G44290.4 40.441 136 79 2 101 235 293 427 6.34e-28 111
Msa0241780 AT5G44290.4 43.023 86 47 1 4 87 137 222 8.19e-16 76.6
Msa0241780 AT5G44290.1 40.441 136 79 2 101 235 293 427 6.34e-28 111
Msa0241780 AT5G44290.1 43.023 86 47 1 4 87 137 222 8.19e-16 76.6
Msa0241780 AT5G44290.3 40.441 136 79 2 101 235 293 427 6.34e-28 111
Msa0241780 AT5G44290.3 43.023 86 47 1 4 87 137 222 8.19e-16 76.6
Msa0241780 AT5G44290.6 40.441 136 79 2 101 235 293 427 6.91e-28 111
Msa0241780 AT5G44290.6 43.023 86 47 1 4 87 137 222 5.46e-16 77.0
Msa0241780 AT1G71530.2 42.063 126 71 2 105 229 307 431 3.08e-27 108
Msa0241780 AT1G71530.2 44.318 88 47 1 2 87 145 232 5.71e-16 77.0
Msa0241780 AT1G71530.1 42.063 126 71 2 105 229 307 431 3.55e-27 109
Msa0241780 AT1G71530.1 44.318 88 47 1 2 87 145 232 1.37e-15 75.9
Msa0241780 AT4G28980.3 39.844 128 75 2 106 231 293 420 3.61e-27 108
Msa0241780 AT4G28980.1 39.844 128 75 2 106 231 293 420 3.61e-27 108
Msa0241780 AT4G28980.2 39.844 128 75 2 106 231 293 420 3.61e-27 108
Msa0241780 AT1G54610.1 40.299 134 74 3 99 229 272 402 7.68e-27 108
Msa0241780 AT1G54610.1 46.392 97 47 4 2 95 116 210 8.79e-16 76.3
Msa0241780 AT1G54610.3 40.299 134 74 3 99 229 272 402 7.68e-27 108
Msa0241780 AT1G54610.3 46.392 97 47 4 2 95 116 210 8.79e-16 76.3
Msa0241780 AT1G54610.2 40.299 134 74 3 99 229 272 402 7.68e-27 108
Msa0241780 AT1G54610.2 46.392 97 47 4 2 95 116 210 8.79e-16 76.3
Msa0241780 AT2G38620.3 56.604 106 33 3 1 93 1 106 1.36e-26 103
Msa0241780 AT2G38620.3 72.414 58 16 0 105 162 180 237 4.70e-25 99.8
Msa0241780 AT2G38620.1 56.604 106 33 3 1 93 1 106 1.36e-26 103
Msa0241780 AT2G38620.1 72.414 58 16 0 105 162 180 237 4.70e-25 99.8
Msa0241780 AT1G01560.2 38.889 126 75 1 106 229 201 326 1.59e-26 105
Msa0241780 AT1G53050.2 43.066 137 69 4 100 229 284 418 2.44e-26 107
Msa0241780 AT1G53050.2 42.593 108 57 4 2 106 132 237 2.09e-14 72.4
Msa0241780 AT1G53050.1 43.066 137 69 4 100 229 284 418 2.44e-26 107
Msa0241780 AT1G53050.1 42.593 108 57 4 2 106 132 237 2.09e-14 72.4
Msa0241780 AT1G74330.2 37.342 158 96 3 79 235 258 413 3.24e-26 107
Msa0241780 AT1G74330.2 38.889 108 61 4 2 106 119 224 6.49e-12 65.1
Msa0241780 AT1G74330.1 37.342 158 96 3 79 235 258 413 3.39e-26 106
Msa0241780 AT1G74330.1 38.889 108 61 4 2 106 119 224 6.52e-12 65.1
Msa0241780 AT1G06390.2 25.430 291 142 9 10 233 76 358 3.58e-26 105
Msa0241780 AT1G06390.1 25.430 291 142 9 10 233 76 358 3.58e-26 105
Msa0241780 AT1G74330.3 37.342 158 96 3 79 235 258 413 3.67e-26 106
Msa0241780 AT1G74330.3 38.889 108 61 4 2 106 119 224 5.33e-12 65.5
Msa0241780 AT4G18710.1 25.773 291 141 9 10 233 46 328 4.39e-26 104
Msa0241780 AT1G71530.3 41.935 124 70 2 105 227 307 429 5.44e-26 105
Msa0241780 AT1G71530.3 44.318 88 47 1 2 87 145 232 6.68e-16 76.6
Msa0241780 AT2G42880.2 30.508 295 137 6 8 235 29 322 5.68e-26 105
Msa0241780 AT3G14720.2 30.743 296 135 7 3 230 24 317 1.26e-25 103
Msa0241780 AT3G14720.3 30.743 296 135 7 3 230 24 317 1.26e-25 103
Msa0241780 AT2G30980.1 25.430 291 142 9 10 233 78 360 1.27e-25 103
Msa0241780 AT2G01450.3 28.333 300 147 7 3 235 15 313 1.66e-25 104
Msa0241780 AT2G01450.1 28.333 300 147 7 3 235 15 313 1.66e-25 104
Msa0241780 AT2G01450.2 28.333 300 147 7 3 235 15 313 1.66e-25 104
Msa0241780 AT2G01450.4 28.333 300 147 7 3 235 15 313 1.66e-25 104
Msa0241780 AT1G01560.3 38.655 119 71 1 106 222 201 319 1.93e-25 102
Msa0241780 AT1G18670.1 32.787 183 113 4 56 235 249 424 4.70e-25 103
Msa0241780 AT1G18670.1 40.741 108 59 4 2 106 129 234 5.61e-14 71.2
Msa0241780 AT1G18670.2 32.787 183 113 4 56 235 249 424 5.11e-25 103
Msa0241780 AT1G18670.2 40.741 108 59 4 2 106 129 234 3.74e-14 71.6
Msa0241780 AT1G18670.3 32.787 183 113 4 56 235 249 424 5.51e-25 103
Msa0241780 AT1G18670.3 40.741 108 59 4 2 106 129 234 5.58e-14 71.2
Msa0241780 AT1G07880.2 38.760 129 77 1 106 232 194 322 7.94e-25 100
Msa0241780 AT1G07880.2 32.353 102 64 1 7 103 36 137 5.98e-11 62.0
Msa0241780 AT1G33770.1 43.846 130 71 2 101 229 297 425 3.32e-24 100
Msa0241780 AT1G33770.1 43.182 88 48 1 2 87 139 226 5.07e-16 77.0
Msa0241780 AT3G14720.1 30.405 296 136 8 3 230 24 317 1.60e-23 99.0
Msa0241780 AT5G19010.1 28.667 300 146 7 3 235 24 322 4.19e-23 97.8
Msa0241780 AT3G61160.4 26.117 291 152 9 4 233 102 390 6.06e-23 96.7
Msa0241780 AT2G42880.1 29.831 295 139 7 8 235 29 322 9.97e-23 96.7
Msa0241780 AT3G61160.2 26.460 291 151 10 4 233 109 397 1.69e-22 95.5
Msa0241780 AT3G61160.1 33.824 136 86 3 100 233 257 390 2.19e-22 95.1
Msa0241780 AT4G18710.2 26.667 240 101 7 10 180 40 273 2.23e-22 92.8
Msa0241780 AT4G00720.1 25.965 285 148 9 10 233 144 426 5.62e-22 94.4
Msa0241780 AT5G14640.1 32.353 136 88 3 100 233 229 362 5.05e-21 90.9
Msa0241780 AT5G14640.2 32.353 136 88 3 100 233 229 362 5.05e-21 90.9
Msa0241780 AT1G57870.1 30.769 143 81 2 100 233 237 370 1.97e-20 89.4
Msa0241780 AT1G57870.4 30.769 143 81 2 100 233 237 370 1.97e-20 89.4
Msa0241780 AT1G57870.2 30.769 143 81 2 100 233 237 370 1.97e-20 89.4
Msa0241780 AT3G05840.2 31.618 136 89 3 100 233 228 361 2.01e-20 89.4
Msa0241780 AT3G05840.1 31.618 136 89 3 100 233 228 361 2.01e-20 89.4
Msa0241780 AT1G57870.3 30.769 143 81 2 100 233 237 370 2.15e-20 89.4
Msa0241780 AT1G09840.11 30.769 143 81 2 100 233 111 244 2.23e-20 87.8
Msa0241780 AT1G09840.3 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0241780 AT1G09840.7 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0241780 AT1G09840.10 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0241780 AT1G09840.6 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0241780 AT1G09840.4 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0241780 AT1G09840.1 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0241780 AT1G09840.9 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0241780 AT1G09840.5 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0241780 AT1G09840.8 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0241780 AT1G09840.2 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0241780 AT5G26751.1 31.618 136 89 3 100 233 224 357 8.40e-20 87.4
Msa0241780 AT3G61160.5 34.146 123 77 3 100 220 257 377 2.12e-19 86.3
Msa0241780 AT1G18150.3 27.609 297 147 7 3 232 103 398 3.11e-18 83.6
Msa0241780 AT1G18150.2 27.609 297 147 7 3 232 103 398 3.11e-18 83.6
Msa0241780 AT1G18150.1 27.609 297 147 7 3 232 103 398 3.11e-18 83.6
Msa0241780 AT3G05050.3 48.485 66 34 0 105 170 298 363 6.86e-18 82.8
Msa0241780 AT3G05050.3 40.187 107 61 2 2 106 136 241 3.24e-16 77.8
Msa0241780 AT3G05050.2 48.485 66 34 0 105 170 298 363 6.86e-18 82.8
Msa0241780 AT3G05050.2 40.187 107 61 2 2 106 136 241 3.24e-16 77.8
Msa0241780 AT3G05050.1 48.485 66 34 0 105 170 298 363 6.86e-18 82.8
Msa0241780 AT3G05050.1 40.187 107 61 2 2 106 136 241 3.24e-16 77.8
Msa0241780 AT3G18040.1 28.231 294 143 8 3 229 22 314 1.43e-17 81.6
Msa0241780 AT3G18040.5 28.231 294 143 8 3 229 17 309 1.47e-17 81.6
Msa0241780 AT3G18040.3 28.231 294 143 8 3 229 131 423 1.63e-17 81.6
Msa0241780 AT3G18040.4 28.231 294 143 8 3 229 131 423 1.98e-17 81.3
Msa0241780 AT2G23080.1 32.143 140 86 3 103 233 184 323 4.79e-17 79.3
Msa0241780 AT3G61160.3 39.080 87 50 2 100 185 257 341 1.13e-16 78.2
Msa0241780 AT3G61160.6 43.939 66 37 0 100 165 264 329 1.25e-16 78.2
Msa0241780 AT1G73670.1 36.296 135 73 4 106 232 255 384 1.80e-16 78.6
Msa0241780 AT1G71530.4 44.318 88 47 1 2 87 145 232 5.00e-16 76.6
Msa0241780 AT1G71530.4 52.083 48 23 0 105 152 307 354 2.09e-12 66.2
Msa0241780 AT5G67380.2 29.286 140 90 3 103 233 227 366 1.24e-15 75.5
Msa0241780 AT5G67380.1 29.286 140 90 3 103 233 260 399 1.42e-15 75.5
Msa0241780 AT1G53510.1 39.259 135 69 4 106 232 190 319 1.89e-15 75.5
Msa0241780 AT5G35980.2 27.982 218 89 6 10 163 128 341 7.76e-15 73.9
Msa0241780 AT2G23070.1 32.394 142 83 5 103 233 282 421 1.01e-14 73.2
Msa0241780 AT5G35980.3 27.273 231 100 6 2 168 85 311 1.11e-14 73.6
Msa0241780 AT5G35980.1 27.273 231 100 6 2 168 120 346 1.71e-14 72.8
Msa0241780 AT3G18040.2 35.821 134 81 3 106 235 100 232 3.47e-14 71.6
Msa0241780 AT3G50000.1 28.571 140 91 3 103 233 254 393 3.48e-14 71.6
Msa0241780 AT1G07880.1 56.000 50 22 0 106 155 194 243 1.19e-13 68.9
Msa0241780 AT1G07880.1 32.353 102 64 1 7 103 36 137 3.40e-11 62.0
Msa0241780 AT1G01560.4 54.000 50 23 0 106 155 201 250 2.50e-13 68.2
Msa0241780 AT1G01560.1 54.000 50 23 0 106 155 201 250 2.50e-13 68.2
Msa0241780 AT4G24740.10 31.757 148 72 6 106 229 75 217 3.75e-13 67.0
Msa0241780 AT4G24740.8 31.757 148 72 6 106 229 75 217 3.75e-13 67.0
Msa0241780 AT4G24740.6 31.757 148 72 6 106 229 178 320 8.90e-13 67.0
Msa0241780 AT4G24740.9 31.757 148 72 6 106 229 178 320 8.90e-13 67.0
Msa0241780 AT4G24740.2 31.757 148 72 6 106 229 178 320 8.90e-13 67.0
Msa0241780 AT4G24740.7 31.757 148 72 6 106 229 243 385 2.16e-12 66.2
Msa0241780 AT4G24740.1 31.757 148 72 6 106 229 281 423 2.16e-12 66.2
Msa0241780 AT3G53570.1 32.432 148 72 6 106 229 300 443 4.35e-12 65.5
Msa0241780 AT3G53570.4 32.432 148 72 6 106 229 300 443 4.35e-12 65.5
Msa0241780 AT3G53570.2 32.432 148 72 6 106 229 300 443 4.35e-12 65.5
Msa0241780 AT3G53570.3 32.432 148 72 6 106 229 286 429 4.88e-12 65.5
Msa0241780 AT3G53570.5 32.432 148 72 6 106 229 286 429 4.88e-12 65.5
Msa0241780 AT4G01595.1 50.980 51 25 0 123 173 20 70 4.41e-11 59.3

Find 73 sgRNAs with CRISPR-Local

Find 375 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAATATGTGCAGAATTTA+TGG 0.082765 2_2:-17768329 Msa0241780:three_prime_UTR
TACCATTAAGATATGGAATT+AGG 0.166785 2_2:+17768363 None:intergenic
ACCCTAATTCCATATCTTAA+TGG 0.213240 2_2:-17768365 Msa0241780:exon
ATGAGTTATTTAAAATATTC+AGG 0.233768 2_2:-17770270 Msa0241780:intron
AGACATTTACTTACCTTAGA+TGG 0.284395 2_2:+17769441 None:intergenic
ACCATTAAGATATGGAATTA+GGG 0.301458 2_2:+17768364 None:intergenic
CGAGATCCAAGCAATATTTC+CGG 0.312083 2_2:+17770388 None:intergenic
CAGTGACAAGCGATTGTATC+TGG 0.313242 2_2:-17772581 Msa0241780:CDS
AGACCAGCTGGCTCAAGATT+TGG 0.324310 2_2:+17769332 None:intergenic
GGAAATGTTGATTTAAAATC+AGG 0.327943 2_2:+17769471 None:intergenic
CCCACTGACCAAACATCAAC+TGG 0.335027 2_2:+17770352 None:intergenic
CCTGGCCATGTATCTTCATT+TGG 0.339457 2_2:+17769507 None:intergenic
AAATTGAAGATCTGAGAAAA+TGG 0.341183 2_2:+17774022 None:intergenic
GTTGAATCTGAAATATTTGT+AGG 0.346235 2_2:+17768224 None:intergenic
ATTTCCCAGGTGGCCATCTA+AGG 0.351155 2_2:-17769454 Msa0241780:intron
GCTCCTGGCAGTAATTCTTT+TGG 0.360943 2_2:+17768426 None:intergenic
ACACCTTTACCATTAAGATA+TGG 0.374572 2_2:+17768356 None:intergenic
GAAGAAGATTCGACTTGAAC+AGG 0.377015 2_2:-17773765 Msa0241780:CDS
TCTTGCAATAATATACGTAT+TGG 0.380187 2_2:+17768100 None:intergenic
ATTCTACCCCAGTTGATGTT+TGG 0.400330 2_2:-17770360 Msa0241780:CDS
ATGGAGAGAAAGGTATATAA+AGG 0.409139 2_2:+17774041 None:intergenic
ATCTGAGAAAATGGAGAGAA+AGG 0.412177 2_2:+17774031 None:intergenic
ACTCCAGAGCATGCTTTGCT+TGG 0.419939 2_2:-17768455 Msa0241780:intron
TTGTGTGCATGACAGGTTGC+AGG 0.425605 2_2:-17772614 Msa0241780:intron
TTCATGCTCCACAGCGCTCC+TGG 0.444473 2_2:+17768411 None:intergenic
CTTAGATCTGAAGAAGCATA+TGG 0.456457 2_2:-17772542 Msa0241780:CDS
ATTAAATACGACAGGATCCT+AGG 0.462050 2_2:+17768254 None:intergenic
TTTAAATAACTCATCAATCT+CGG 0.469825 2_2:+17770279 None:intergenic
AACATACGGCGTCGTTTACA+AGG 0.470308 2_2:-17773822 Msa0241780:CDS
CCAGTTGATGTTTGGTCAGT+GGG 0.471352 2_2:-17770352 Msa0241780:CDS
TACACTGTGGTACCGAGCTC+CGG 0.471861 2_2:-17770407 Msa0241780:CDS
AATCGGCGACCTCTATTCCC+TGG 0.474228 2_2:-17770307 Msa0241780:CDS
ATTCCATATCTTAATGGTAA+AGG 0.484447 2_2:-17768359 Msa0241780:three_prime_UTR
AAGTCTGAATAGCAATATAC+AGG 0.494695 2_2:-17768169 Msa0241780:three_prime_UTR
ATCGGCGACCTCTATTCCCT+GGG 0.499404 2_2:-17770306 Msa0241780:CDS
GTTCCAAATCTTGAGCCAGC+TGG 0.499914 2_2:-17769335 Msa0241780:CDS
TACGAAAAGGTGGAGAAGAT+TGG 0.503558 2_2:-17773851 Msa0241780:CDS
ATCTCACGAATGGCGGTGCT+AGG 0.506207 2_2:+17773728 None:intergenic
TCAGGCAATGAAGTTACTCC+TGG 0.506307 2_2:+17769489 None:intergenic
CCCAGTTGATGTTTGGTCAG+TGG 0.508697 2_2:-17770353 Msa0241780:CDS
CGAGCTCCGGAAATATTGCT+TGG 0.517006 2_2:-17770394 Msa0241780:CDS
TCATCAATCTCGGAATCCCC+AGG 0.521762 2_2:+17770289 None:intergenic
GATTTGGAACCACAGTTGCT+AGG 0.531667 2_2:+17769348 None:intergenic
GGGATGTATATTTGCAGAGA+TGG 0.536491 2_2:-17770332 Msa0241780:CDS
CCACCAAAAGAATTACTGCC+AGG 0.543217 2_2:-17768429 Msa0241780:CDS
CCAAATGAAGATACATGGCC+AGG 0.550637 2_2:-17769507 Msa0241780:CDS
GACAAAATATTAAATACGAC+AGG 0.550955 2_2:+17768246 None:intergenic
TCGGAATCCCCAGGGAATAG+AGG 0.553263 2_2:+17770298 None:intergenic
CGACTTGAACAGGAAGATGA+AGG 0.558474 2_2:-17773755 Msa0241780:CDS
TATTTGCAGAGATGGCAAAT+CGG 0.561219 2_2:-17770324 Msa0241780:CDS
TGCAGCATAGGAACATCGTT+AGG 0.570773 2_2:-17773688 Msa0241780:intron
TTAAGAAGATCAAGACCAGC+TGG 0.571432 2_2:+17769320 None:intergenic
GCTACTTTCTTCAAAGACCT+AGG 0.572462 2_2:-17768271 Msa0241780:three_prime_UTR
AAGATTGGTGAAGGAACATA+CGG 0.575038 2_2:-17773836 Msa0241780:CDS
CAAGCAATATTTCCGGAGCT+CGG 0.578128 2_2:+17770395 None:intergenic
TCGAATCTTCTTCAACGCGA+TGG 0.583845 2_2:+17773775 None:intergenic
CGATGGTTTCATTCGTAACA+CGG 0.593784 2_2:+17773792 None:intergenic
CCACTGACCAAACATCAACT+GGG 0.597741 2_2:+17770353 None:intergenic
CTTACCTTAGATGGCCACCT+GGG 0.599601 2_2:+17769450 None:intergenic
CGGGAGAGAGAGATGAGTCT+CGG 0.613428 2_2:-17774086 Msa0241780:five_prime_UTR
TGCTTAAAGAAATGCAGCAT+AGG 0.616303 2_2:-17773700 Msa0241780:CDS
AAGCAGCGAAATCTCACGAA+TGG 0.622360 2_2:+17773718 None:intergenic
ACTTACCTTAGATGGCCACC+TGG 0.622989 2_2:+17769449 None:intergenic
CAGCGAAATCTCACGAATGG+CGG 0.633511 2_2:+17773721 None:intergenic
GTACACCAAATGAAGATACA+TGG 0.634052 2_2:-17769512 Msa0241780:CDS
TTTGCAGGACCTAGCAACTG+TGG 0.634970 2_2:-17769357 Msa0241780:intron
AAGGTGGAGAAGATTGGTGA+AGG 0.638609 2_2:-17773845 Msa0241780:CDS
TTAAATCAACATTTCCCAGG+TGG 0.647469 2_2:-17769464 Msa0241780:CDS
CATCAATCTCGGAATCCCCA+GGG 0.652311 2_2:+17770290 None:intergenic
AATTACTGCCAGGAGCGCTG+TGG 0.660367 2_2:-17768419 Msa0241780:CDS
CACTGACCAAACATCAACTG+GGG 0.711534 2_2:+17770354 None:intergenic
GTTTGTAGGTAGTTACACTG+TGG 0.718192 2_2:-17770420 Msa0241780:intron
TCGGCGACCTCTATTCCCTG+GGG 0.729622 2_2:-17770305 Msa0241780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTAATTACGAATATTAA+AGG + chr2_2:17770410-17770429 None:intergenic 10.0%
!! AAAATGAAACATAAATAAAT+AGG - chr2_2:17771006-17771025 Msa0241780:intron 10.0%
!! AAATGAAACATAAATAAATA+GGG - chr2_2:17771007-17771026 Msa0241780:intron 10.0%
!! AAAAAAGAAAGAAAATTTAA+TGG + chr2_2:17773311-17773330 None:intergenic 10.0%
!!! TTAAATTTTCTTTCTTTTTT+TGG - chr2_2:17773311-17773330 Msa0241780:intron 10.0%
!! TAAAATTTAGGAATTTAGTA+AGG + chr2_2:17769338-17769357 None:intergenic 15.0%
!!! ATGAGTTATTTAAAATATTC+AGG - chr2_2:17771924-17771943 Msa0241780:intron 15.0%
!!! TTTTGACTTTAATATTTACA+AGG - chr2_2:17772020-17772039 Msa0241780:intron 15.0%
!!! TTTGACTTTAATATTTACAA+GGG - chr2_2:17772021-17772040 Msa0241780:intron 15.0%
!! TGTTAAATAGATTTGAAAAA+CGG - chr2_2:17772553-17772572 Msa0241780:CDS 15.0%
!!! GATGAAATATTATTTTTCTT+TGG - chr2_2:17772913-17772932 Msa0241780:intron 15.0%
!!! AGTTTATTTTGTTCTTAATT+AGG - chr2_2:17773039-17773058 Msa0241780:intron 15.0%
!! ATATATTGATAAATATTGGA+TGG - chr2_2:17773125-17773144 Msa0241780:intron 15.0%
!!! GTACTTCTTTTTTTTTTTTA+AGG - chr2_2:17773183-17773202 Msa0241780:intron 15.0%
!! TTTCTTAATAGAAATAACAA+GGG - chr2_2:17773266-17773285 Msa0241780:intron 15.0%
!! AACAATATCATCATTCATTA+TGG + chr2_2:17768918-17768937 None:intergenic 20.0%
!!! AACATTCTGTATGTTTTTTT+AGG - chr2_2:17768986-17769005 Msa0241780:intron 20.0%
!! TAGAATCAAAACTATCAAAA+AGG + chr2_2:17769159-17769178 None:intergenic 20.0%
!! AATCATGGTACATAAAATTT+AGG + chr2_2:17769350-17769369 None:intergenic 20.0%
!!! TGTATTTCAATCGTTTTTTA+TGG + chr2_2:17769441-17769460 None:intergenic 20.0%
!! CTTTATTAACATTAATGATG+TGG + chr2_2:17770284-17770303 None:intergenic 20.0%
!! TAATTTAGCATACAAACAAT+GGG + chr2_2:17770372-17770391 None:intergenic 20.0%
!! ATAATTTAGCATACAAACAA+TGG + chr2_2:17770373-17770392 None:intergenic 20.0%
!! ATTGTTTGTATGCTAAATTA+TGG - chr2_2:17770372-17770391 Msa0241780:CDS 20.0%
!! TTGTTTGTATGCTAAATTAT+GGG - chr2_2:17770373-17770392 Msa0241780:CDS 20.0%
!! GAAAAAAGAATCACAAATTA+TGG - chr2_2:17770910-17770929 Msa0241780:intron 20.0%
!! AAAAAGGAAAAAAGAGAAAA+TGG - chr2_2:17770969-17770988 Msa0241780:intron 20.0%
!! TTTAAATAACTCATCAATCT+CGG + chr2_2:17771918-17771937 None:intergenic 20.0%
!!! GTGAATATTTTTATTTCCAT+AGG - chr2_2:17771946-17771965 Msa0241780:intron 20.0%
!!! TTGCTATTCTTATTTATAAG+TGG - chr2_2:17772082-17772101 Msa0241780:intron 20.0%
!! AGTAATTGTGTTGAATAAAT+TGG - chr2_2:17772162-17772181 Msa0241780:intron 20.0%
!!! AACAAATTTTATATGTCAAC+TGG + chr2_2:17772537-17772556 None:intergenic 20.0%
!!! TTCTTTTTATGAAGAATCTT+GGG - chr2_2:17772660-17772679 Msa0241780:intron 20.0%
!!! TTATTTTGTTCTTAATTAGG+AGG - chr2_2:17773042-17773061 Msa0241780:intron 20.0%
!!! TTTTTTTAAGGAAGAAAACA+TGG - chr2_2:17773195-17773214 Msa0241780:intron 20.0%
!! GTTTCTTAATAGAAATAACA+AGG - chr2_2:17773265-17773284 Msa0241780:intron 20.0%
!! CAATTTCCATTAAATTTCTT+TGG - chr2_2:17773684-17773703 Msa0241780:intron 20.0%
! AGAAACCAAAAAGAAAACAA+CGG - chr2_2:17768088-17768107 Msa0241780:three_prime_UTR 25.0%
! AAATTGAAGATCTGAGAAAA+TGG + chr2_2:17768175-17768194 None:intergenic 25.0%
! GTATAATTCATCATCTACAT+CGG + chr2_2:17768659-17768678 None:intergenic 25.0%
!!! TTTTTGGTGAATTGTTGTTT+TGG - chr2_2:17768831-17768850 Msa0241780:intron 25.0%
! GATTCTATTCAGTTAATGTT+TGG - chr2_2:17769172-17769191 Msa0241780:intron 25.0%
!! TGATTTGGCAATAAATACTA+TGG - chr2_2:17769817-17769836 Msa0241780:intron 25.0%
! CATTGTCTAAATTAGATTTG+TGG + chr2_2:17769861-17769880 None:intergenic 25.0%
!!! TTTAGTGGATTACAGTTAAT+TGG - chr2_2:17769995-17770014 Msa0241780:intron 25.0%
!!! ACAACTTGCTATATAAATAG+AGG + chr2_2:17770111-17770130 None:intergenic 25.0%
!! TTTGCTTATTTCTTTGGTTA+TGG - chr2_2:17770231-17770250 Msa0241780:intron 25.0%
! CATACATAACTAAATACACA+TGG + chr2_2:17770313-17770332 None:intergenic 25.0%
! ATAAGAGAATAAAATGACAG+AGG - chr2_2:17770842-17770861 Msa0241780:intron 25.0%
! AGATAATTAGTGTACAGAAA+GGG - chr2_2:17770936-17770955 Msa0241780:intron 25.0%
! GATAAATACATATGTTCTCT+AGG + chr2_2:17771628-17771647 None:intergenic 25.0%
! AAATAAACTAAGAGCAGATT+AGG - chr2_2:17771667-17771686 Msa0241780:intron 25.0%
! AACTGGAAAATCTAAATTCA+TGG + chr2_2:17772520-17772539 None:intergenic 25.0%
!! GTTCTTTTTATGAAGAATCT+TGG - chr2_2:17772659-17772678 Msa0241780:intron 25.0%
!!! GGAAATGTTGATTTAAAATC+AGG + chr2_2:17772726-17772745 None:intergenic 25.0%
!! ATTTTAAATCAACATTTCCC+AGG - chr2_2:17772727-17772746 Msa0241780:intron 25.0%
! TGCTTCTAAATATATTTCTC+TGG + chr2_2:17773102-17773121 None:intergenic 25.0%
! AAGAAAGAAAATTTAATGGC+TGG + chr2_2:17773307-17773326 None:intergenic 25.0%
! TTCAATGCAAAAGCAATTAA+AGG - chr2_2:17773402-17773421 Msa0241780:intron 25.0%
! TCAATGCAAAAGCAATTAAA+GGG - chr2_2:17773403-17773422 Msa0241780:intron 25.0%
!! CCTATTCATTATTTGATAAC+TGG + chr2_2:17773558-17773577 None:intergenic 25.0%
! CCAGTTATCAAATAATGAAT+AGG - chr2_2:17773555-17773574 Msa0241780:intron 25.0%
! GAGGATTATGATTAATACAT+GGG + chr2_2:17773581-17773600 None:intergenic 25.0%
! AGAGGATTATGATTAATACA+TGG + chr2_2:17773582-17773601 None:intergenic 25.0%
! ACCATTAAGATATGGAATTA+GGG + chr2_2:17773833-17773852 None:intergenic 25.0%
! TACCATTAAGATATGGAATT+AGG + chr2_2:17773834-17773853 None:intergenic 25.0%
! ATTCCATATCTTAATGGTAA+AGG - chr2_2:17773835-17773854 Msa0241780:CDS 25.0%
! GACAAAATATTAAATACGAC+AGG + chr2_2:17773951-17773970 None:intergenic 25.0%
!! GTTGAATCTGAAATATTTGT+AGG + chr2_2:17773973-17773992 None:intergenic 25.0%
! TCTTGCAATAATATACGTAT+TGG + chr2_2:17774097-17774116 None:intergenic 25.0%
GAAACCAAAAAGAAAACAAC+GGG - chr2_2:17768089-17768108 Msa0241780:three_prime_UTR 30.0%
! ATGGAGAGAAAGGTATATAA+AGG + chr2_2:17768156-17768175 None:intergenic 30.0%
AATTTGTGTGTTGAGTGAAT+CGG - chr2_2:17768780-17768799 Msa0241780:intron 30.0%
!!! GTGAATTGTTGTTTTGGTTT+TGG - chr2_2:17768837-17768856 Msa0241780:intron 30.0%
TCAGTTAATGTTTGGTAAAC+TGG - chr2_2:17769180-17769199 Msa0241780:intron 30.0%
! ACTGGTAGTGTTATTGATAA+AGG - chr2_2:17769198-17769217 Msa0241780:intron 30.0%
!! GTTCTAAAGTAATCGTTTGA+TGG - chr2_2:17769220-17769239 Msa0241780:intron 30.0%
ATGCTCTTTATTGTTCATCT+AGG - chr2_2:17769248-17769267 Msa0241780:intron 30.0%
TAGGAATTTAGTAAGGCTAA+AGG + chr2_2:17769331-17769350 None:intergenic 30.0%
TAAGAGGGACATATAAATCA+TGG + chr2_2:17769365-17769384 None:intergenic 30.0%
GTGATCTTAAAATAACAGAG+AGG + chr2_2:17769750-17769769 None:intergenic 30.0%
GTCTAAATTAGATTTGTGGA+AGG + chr2_2:17769857-17769876 None:intergenic 30.0%
AATGATGATAAGCTTATGCT+TGG - chr2_2:17769893-17769912 Msa0241780:intron 30.0%
! TCTGATAATTTTCCTGTTTC+TGG - chr2_2:17770032-17770051 Msa0241780:intron 30.0%
! AAGTTTGACCTATAGCATTT+TGG - chr2_2:17770075-17770094 Msa0241780:intron 30.0%
CAAAGAAATAAGCAAAGCAA+TGG + chr2_2:17770227-17770246 None:intergenic 30.0%
! CATTGCTTTGCTTATTTCTT+TGG - chr2_2:17770225-17770244 Msa0241780:intron 30.0%
ATAAAGGAACATCTGCAAAA+AGG + chr2_2:17770509-17770528 None:intergenic 30.0%
GAGATAATTAGTGTACAGAA+AGG - chr2_2:17770935-17770954 Msa0241780:intron 30.0%
AGGAAAAAAGAGAAAATGGA+TGG - chr2_2:17770973-17770992 Msa0241780:intron 30.0%
AAATAAATAGGGACAATGAG+AGG - chr2_2:17771018-17771037 Msa0241780:intron 30.0%
AGAGGTGATAATAGAAAGAA+TGG - chr2_2:17771036-17771055 Msa0241780:intron 30.0%
! ATAGCATATAGCCTTTGTTT+CGG - chr2_2:17771330-17771349 Msa0241780:intron 30.0%
GGAAATAAACTCAAGTCATT+TGG + chr2_2:17771488-17771507 None:intergenic 30.0%
TAGATACAAGAATTAGTGAG+GGG + chr2_2:17771558-17771577 None:intergenic 30.0%
CTAGATACAAGAATTAGTGA+GGG + chr2_2:17771559-17771578 None:intergenic 30.0%
! TGTCATTGATGATTGTTTGT+AGG - chr2_2:17771760-17771779 Msa0241780:intron 30.0%
TCCATGTTGATATCATTTGA+TGG - chr2_2:17772114-17772133 Msa0241780:intron 30.0%
ATTGTGTTGAATAAATTGGC+TGG - chr2_2:17772166-17772185 Msa0241780:intron 30.0%
AGCTTGTAGTTACTCAATTT+GGG + chr2_2:17772265-17772284 None:intergenic 30.0%
! TAGCTTGTAGTTACTCAATT+TGG + chr2_2:17772266-17772285 None:intergenic 30.0%
ATAAGTCCATAGAGAAAGTA+TGG - chr2_2:17772288-17772307 Msa0241780:intron 30.0%
CAATAACCATACTTTCTCTA+TGG + chr2_2:17772297-17772316 None:intergenic 30.0%
ATTTATGCCAACTTATGAGT+TGG - chr2_2:17772333-17772352 Msa0241780:intron 30.0%
AAGATAACCAACTCATAAGT+TGG + chr2_2:17772343-17772362 None:intergenic 30.0%
GTTGGTTATCTTTAGTGTTA+TGG - chr2_2:17772351-17772370 Msa0241780:intron 30.0%
AATCTCACTGAAAAACACTT+CGG + chr2_2:17772383-17772402 None:intergenic 30.0%
ATAGCAAAGGAGTTCTTAAT+GGG - chr2_2:17772463-17772482 Msa0241780:intron 30.0%
AGATTTGAAAAACGGATCAT+AGG - chr2_2:17772561-17772580 Msa0241780:CDS 30.0%
AATACTCTTTGCTTTCTAAC+AGG - chr2_2:17772587-17772606 Msa0241780:CDS 30.0%
ATACTCTTTGCTTTCTAACA+GGG - chr2_2:17772588-17772607 Msa0241780:CDS 30.0%
CAACGCGTAAATATAACTAT+AGG + chr2_2:17772640-17772659 None:intergenic 30.0%
AGACATTTACTTACCTTAGA+TGG + chr2_2:17772756-17772775 None:intergenic 30.0%
GATCACATCAATTCAGATTA+AGG + chr2_2:17772784-17772803 None:intergenic 30.0%
GTTTGTTTATCCCAATAACA+CGG + chr2_2:17773016-17773035 None:intergenic 30.0%
TTTCTAAGCTATGATCAGTA+TGG + chr2_2:17773158-17773177 None:intergenic 30.0%
TGATCATAGCTTAGAAAACA+TGG - chr2_2:17773161-17773180 Msa0241780:intron 30.0%
ACAAGTGTTCAAAAAAGACA+CGG + chr2_2:17773453-17773472 None:intergenic 30.0%
GGAGAAAAAAACTGATATAG+AGG + chr2_2:17773600-17773619 None:intergenic 30.0%
CAAGTAATTCATGCAAATTG+AGG + chr2_2:17773621-17773640 None:intergenic 30.0%
TCAGCACCAAAGAAATTTAA+TGG + chr2_2:17773693-17773712 None:intergenic 30.0%
ACCCTAATTCCATATCTTAA+TGG - chr2_2:17773829-17773848 Msa0241780:CDS 30.0%
ACACCTTTACCATTAAGATA+TGG + chr2_2:17773841-17773860 None:intergenic 30.0%
AGCAATATGTGCAGAATTTA+TGG - chr2_2:17773865-17773884 Msa0241780:intron 30.0%
!!! ATTTTGATTGTGCCAGAAAT+GGG - chr2_2:17773888-17773907 Msa0241780:intron 30.0%
AAGTCTGAATAGCAATATAC+AGG - chr2_2:17774025-17774044 Msa0241780:five_prime_UTR 30.0%
ATCTGAGAAAATGGAGAGAA+AGG + chr2_2:17768166-17768185 None:intergenic 35.0%
!!! GTCATTTTTCTTCTTCACGA+TGG - chr2_2:17768227-17768246 Msa0241780:three_prime_UTR 35.0%
! TTCGATTTTGCAGTACGAAA+AGG - chr2_2:17768330-17768349 Msa0241780:three_prime_UTR 35.0%
AAGATTGGTGAAGGAACATA+CGG - chr2_2:17768358-17768377 Msa0241780:three_prime_UTR 35.0%
TGCTTAAAGAAATGCAGCAT+AGG - chr2_2:17768494-17768513 Msa0241780:intron 35.0%
! ATTTTGTCGATGTTTGATGC+CGG - chr2_2:17769081-17769100 Msa0241780:intron 35.0%
CAACCAATCCTTATCTTGTT+TGG - chr2_2:17769104-17769123 Msa0241780:intron 35.0%
! CAATCCTTATCTTGTTTGGT+GGG - chr2_2:17769108-17769127 Msa0241780:intron 35.0%
! AATCCTTATCTTGTTTGGTG+GGG - chr2_2:17769109-17769128 Msa0241780:intron 35.0%
AGCTTGTATAACAGCTAAGA+GGG + chr2_2:17769380-17769399 None:intergenic 35.0%
AAGCTTGTATAACAGCTAAG+AGG + chr2_2:17769381-17769400 None:intergenic 35.0%
TAGCTGTTATACAAGCTTTC+TGG - chr2_2:17769383-17769402 Msa0241780:intron 35.0%
TGTTATACAAGCTTTCTGGA+AGG - chr2_2:17769387-17769406 Msa0241780:intron 35.0%
AGCATATCTTGATAAGGAGA+TGG + chr2_2:17769554-17769573 None:intergenic 35.0%
TCTCCTTATCAAGATATGCT+TGG - chr2_2:17769554-17769573 Msa0241780:intron 35.0%
!!! GTATCTGGTTTTTGAGTATC+TGG - chr2_2:17769628-17769647 Msa0241780:intron 35.0%
! CTTAGATCTGAAGAAGCATA+TGG - chr2_2:17769652-17769671 Msa0241780:intron 35.0%
AGTGTGCAAGAAATCTGATT+TGG - chr2_2:17769802-17769821 Msa0241780:intron 35.0%
ATGCTTGGCAACAAATAGTT+TGG - chr2_2:17769908-17769927 Msa0241780:intron 35.0%
CATCATTTAGATCCAGAAAC+AGG + chr2_2:17770047-17770066 None:intergenic 35.0%
!! TTGACCTATAGCATTTTGGT+TGG - chr2_2:17770079-17770098 Msa0241780:intron 35.0%
TAGCATACAAACAATGGGAA+GGG + chr2_2:17770367-17770386 None:intergenic 35.0%
TTAGCATACAAACAATGGGA+AGG + chr2_2:17770368-17770387 None:intergenic 35.0%
GTGAACTTGATCAGTTAGTT+TGG - chr2_2:17770463-17770482 Msa0241780:intron 35.0%
TTCCTTTATCAAATGCTCTG+TGG - chr2_2:17770520-17770539 Msa0241780:intron 35.0%
! TTCCACAGAGCATTTGATAA+AGG + chr2_2:17770525-17770544 None:intergenic 35.0%
CGATCTATCAACAAATTCTG+TGG + chr2_2:17770592-17770611 None:intergenic 35.0%
CAAGCTTGAGTGAATTAGTA+CGG + chr2_2:17770615-17770634 None:intergenic 35.0%
TCATGTGTAAATGTTCTGAC+AGG + chr2_2:17770670-17770689 None:intergenic 35.0%
TGTCAGAACATTTACACATG+AGG - chr2_2:17770669-17770688 Msa0241780:intron 35.0%
AGCGACTAGAAGCAAATATA+AGG + chr2_2:17770706-17770725 None:intergenic 35.0%
GGTGATAATAGAAAGAATGG+AGG - chr2_2:17771039-17771058 Msa0241780:intron 35.0%
AAAGAGCTGGATTCAATTGA+TGG + chr2_2:17771200-17771219 None:intergenic 35.0%
AACAGAAAGAGAAAAAGAGC+TGG + chr2_2:17771213-17771232 None:intergenic 35.0%
GAAACAAAGGCTATATGCTA+TGG + chr2_2:17771331-17771350 None:intergenic 35.0%
! TAGCATATAGCCTTTGTTTC+GGG - chr2_2:17771331-17771350 Msa0241780:intron 35.0%
TCATTGTTAAATGACAGCCA+TGG + chr2_2:17771385-17771404 None:intergenic 35.0%
! GCTGTCATTTAACAATGACT+GGG - chr2_2:17771387-17771406 Msa0241780:intron 35.0%
TAACAATGACTGGGAAACAT+TGG - chr2_2:17771396-17771415 Msa0241780:intron 35.0%
AACAATGACTGGGAAACATT+GGG - chr2_2:17771397-17771416 Msa0241780:intron 35.0%
GCTAGATACAAGAATTAGTG+AGG + chr2_2:17771560-17771579 None:intergenic 35.0%
TCTCTAGGTTACTGAAGTTT+GGG + chr2_2:17771613-17771632 None:intergenic 35.0%
TTCTCTAGGTTACTGAAGTT+TGG + chr2_2:17771614-17771633 None:intergenic 35.0%
GGAGTGCATATAAAATCTTG+CGG - chr2_2:17771688-17771707 Msa0241780:intron 35.0%
GCATATAAAATCTTGCGGAA+AGG - chr2_2:17771693-17771712 Msa0241780:intron 35.0%
TATTTGCAGAGATGGCAAAT+CGG - chr2_2:17771870-17771889 Msa0241780:intron 35.0%
GCCATCAAATGATATCAACA+TGG + chr2_2:17772118-17772137 None:intergenic 35.0%
TACTGTGACTAGCATTCAAA+GGG + chr2_2:17772146-17772165 None:intergenic 35.0%
TTACTGTGACTAGCATTCAA+AGG + chr2_2:17772147-17772166 None:intergenic 35.0%
AGGTTCAGAGAAAGAAAACA+GGG + chr2_2:17772227-17772246 None:intergenic 35.0%
AAGGTTCAGAGAAAGAAAAC+AGG + chr2_2:17772228-17772247 None:intergenic 35.0%
TGTAGTTACTCAATTTGGGA+GGG + chr2_2:17772261-17772280 None:intergenic 35.0%
TTGTAGTTACTCAATTTGGG+AGG + chr2_2:17772262-17772281 None:intergenic 35.0%
TTGGCATAAATATTCTGCTG+AGG + chr2_2:17772324-17772343 None:intergenic 35.0%
CATAGCAAAGGAGTTCTTAA+TGG - chr2_2:17772462-17772481 Msa0241780:intron 35.0%
TAGCAAAGGAGTTCTTAATG+GGG - chr2_2:17772464-17772483 Msa0241780:intron 35.0%
GTACACCAAATGAAGATACA+TGG - chr2_2:17772682-17772701 Msa0241780:intron 35.0%
TTAAATCAACATTTCCCAGG+TGG - chr2_2:17772730-17772749 Msa0241780:intron 35.0%
AACCTTATCTTGTACTTTGC+AGG - chr2_2:17772822-17772841 Msa0241780:intron 35.0%
!! TTTTTGGTGATTGATTGACG+TGG - chr2_2:17773327-17773346 Msa0241780:intron 35.0%
!!! GATTTTGATTGTGCCAGAAA+TGG - chr2_2:17773887-17773906 Msa0241780:intron 35.0%
AAAAATAGCACACCCATTTC+TGG + chr2_2:17773903-17773922 None:intergenic 35.0%
ATTAAATACGACAGGATCCT+AGG + chr2_2:17773943-17773962 None:intergenic 35.0%
TCAGACTTGCACAAAAAAGA+AGG + chr2_2:17774013-17774032 None:intergenic 35.0%
!! CTCTCCCGTTGTTTTCTTTT+TGG + chr2_2:17768096-17768115 None:intergenic 40.0%
! GATTTTGCAGTACGAAAAGG+TGG - chr2_2:17768333-17768352 Msa0241780:three_prime_UTR 40.0%
TACGAAAAGGTGGAGAAGAT+TGG - chr2_2:17768343-17768362 Msa0241780:three_prime_UTR 40.0%
CGATGGTTTCATTCGTAACA+CGG + chr2_2:17768405-17768424 None:intergenic 40.0%
! GAAGAAGATTCGACTTGAAC+AGG - chr2_2:17768429-17768448 Msa0241780:CDS 40.0%
TTATACGTGCAGCAGTGAAT+AGG - chr2_2:17768673-17768692 Msa0241780:intron 40.0%
ATTGCCATTGTGCATTTGTG+TGG - chr2_2:17769022-17769041 Msa0241780:intron 40.0%
CTAACCACACAAATGCACAA+TGG + chr2_2:17769029-17769048 None:intergenic 40.0%
!! ACAAGATAAGGATTGGTTGC+CGG + chr2_2:17769103-17769122 None:intergenic 40.0%
CCACCAAACAAGATAAGGAT+TGG + chr2_2:17769110-17769129 None:intergenic 40.0%
! CCAATCCTTATCTTGTTTGG+TGG - chr2_2:17769107-17769126 Msa0241780:intron 40.0%
CCACCAAGCATATCTTGATA+AGG + chr2_2:17769560-17769579 None:intergenic 40.0%
CCTTATCAAGATATGCTTGG+TGG - chr2_2:17769557-17769576 Msa0241780:intron 40.0%
! CGCGGATCTTTTATAAACTC+AGG + chr2_2:17769686-17769705 None:intergenic 40.0%
!! TCACTCACTTTTACTTGTCG+CGG + chr2_2:17769704-17769723 None:intergenic 40.0%
GTGAGTTTCTTGACGTATTG+CGG - chr2_2:17769970-17769989 Msa0241780:intron 40.0%
AGCTCCAACCAAAATGCTAT+AGG + chr2_2:17770086-17770105 None:intergenic 40.0%
!! GTCGACTTGAACAAACACAA+TGG + chr2_2:17770170-17770189 None:intergenic 40.0%
! TCACTCAAGCTTGCAGATTT+TGG - chr2_2:17770622-17770641 Msa0241780:intron 40.0%
! CAAGCTTGCAGATTTTGGAT+TGG - chr2_2:17770627-17770646 Msa0241780:intron 40.0%
TCCTCTTGCTCTAATTAGAG+AGG - chr2_2:17770771-17770790 Msa0241780:intron 40.0%
TCCTCTCTAATTAGAGCAAG+AGG + chr2_2:17770775-17770794 None:intergenic 40.0%
CAGAGGTAAAAGATGACACA+TGG - chr2_2:17770859-17770878 Msa0241780:intron 40.0%
GATGACACATGGAAACAAGA+AGG - chr2_2:17770870-17770889 Msa0241780:intron 40.0%
TTAGTGTACAGAAAGGGATG+AGG - chr2_2:17770942-17770961 Msa0241780:intron 40.0%
AAAGGGATGAGGTCAGAAAA+AGG - chr2_2:17770953-17770972 Msa0241780:intron 40.0%
AGGAAAGACCTGAATGGAAA+TGG - chr2_2:17771101-17771120 Msa0241780:intron 40.0%
GGAAAGACCTGAATGGAAAT+GGG - chr2_2:17771102-17771121 Msa0241780:intron 40.0%
GGGAGTAACCAAATGAGTTA+CGG - chr2_2:17771122-17771141 Msa0241780:intron 40.0%
AGTAACCAAATGAGTTACGG+AGG - chr2_2:17771125-17771144 Msa0241780:intron 40.0%
GTTTCAAACTCTCGTGTCAT+GGG - chr2_2:17771168-17771187 Msa0241780:intron 40.0%
GGAAATGGTTGAGAAACCAA+GGG + chr2_2:17771243-17771262 None:intergenic 40.0%
AAAGGCTATATGCTATGGCA+TGG + chr2_2:17771326-17771345 None:intergenic 40.0%
ATCTGACAAACCCGAAACAA+AGG + chr2_2:17771344-17771363 None:intergenic 40.0%
!! GTTTCGGGTTTGTCAGATTT+CGG - chr2_2:17771346-17771365 Msa0241780:intron 40.0%
AAATGACAGCCATGGAAGAA+TGG + chr2_2:17771377-17771396 None:intergenic 40.0%
! GGCTGTCATTTAACAATGAC+TGG - chr2_2:17771386-17771405 Msa0241780:intron 40.0%
TTGGGAATGCTGATGTAATC+TGG - chr2_2:17771415-17771434 Msa0241780:intron 40.0%
AGCAATGAAGGATCACTACT+AGG + chr2_2:17771509-17771528 None:intergenic 40.0%
AGTAGTGATCCTTCATTGCT+AGG - chr2_2:17771509-17771528 Msa0241780:intron 40.0%
GTAGTGATCCTTCATTGCTA+GGG - chr2_2:17771510-17771529 Msa0241780:intron 40.0%
CTCTAGGTTACTGAAGTTTG+GGG + chr2_2:17771612-17771631 None:intergenic 40.0%
!! CGGAAAGGTGTTATTGAAGA+TGG - chr2_2:17771708-17771727 Msa0241780:intron 40.0%
GTTTGTAGGTAGTTACACTG+TGG - chr2_2:17771774-17771793 Msa0241780:intron 40.0%
CGAGATCCAAGCAATATTTC+CGG + chr2_2:17771809-17771828 None:intergenic 40.0%
! ATTCTACCCCAGTTGATGTT+TGG - chr2_2:17771834-17771853 Msa0241780:intron 40.0%
GGGATGTATATTTGCAGAGA+TGG - chr2_2:17771862-17771881 Msa0241780:intron 40.0%
TCCATAGGACTTGTACTTCT+TGG - chr2_2:17771961-17771980 Msa0241780:intron 40.0%
! ACCAAGAAGTACAAGTCCTA+TGG + chr2_2:17771965-17771984 None:intergenic 40.0%
GTTCAGAGAAAGAAAACAGG+GGG + chr2_2:17772225-17772244 None:intergenic 40.0%
GGTTCAGAGAAAGAAAACAG+GGG + chr2_2:17772226-17772245 None:intergenic 40.0%
GTAGTTACTCAATTTGGGAG+GGG + chr2_2:17772260-17772279 None:intergenic 40.0%
CTGACTGAAATGCATAGCAA+AGG - chr2_2:17772450-17772469 Msa0241780:intron 40.0%
GTCCTGCAAAGTACAAGATA+AGG + chr2_2:17772827-17772846 None:intergenic 40.0%
TTAAGAAGATCAAGACCAGC+TGG + chr2_2:17772877-17772896 None:intergenic 40.0%
GTTTATACCTCGATTGTTGC+CGG - chr2_2:17772959-17772978 Msa0241780:intron 40.0%
TCAGTCTGAATCCGTGTTAT+TGG - chr2_2:17773002-17773021 Msa0241780:intron 40.0%
! CAGTCTGAATCCGTGTTATT+GGG - chr2_2:17773003-17773022 Msa0241780:intron 40.0%
CAAAAAAGACACGGCAATTG+AGG + chr2_2:17773444-17773463 None:intergenic 40.0%
TGGTTTATGCATCCTCTGTA+TGG - chr2_2:17773498-17773517 Msa0241780:intron 40.0%
CTAATTATCCTGCCATACAG+AGG + chr2_2:17773513-17773532 None:intergenic 40.0%
! CTGGCAGTAATTCTTTTGGT+GGG + chr2_2:17773767-17773786 None:intergenic 40.0%
! GCTACTTTCTTCAAAGACCT+AGG - chr2_2:17773923-17773942 Msa0241780:intron 40.0%
AAGGTGGAGAAGATTGGTGA+AGG - chr2_2:17768349-17768368 Msa0241780:three_prime_UTR 45.0%
AACATACGGCGTCGTTTACA+AGG - chr2_2:17768372-17768391 Msa0241780:exon 45.0%
TCGAATCTTCTTCAACGCGA+TGG + chr2_2:17768422-17768441 None:intergenic 45.0%
CGACTTGAACAGGAAGATGA+AGG - chr2_2:17768439-17768458 Msa0241780:CDS 45.0%
AAGCAGCGAAATCTCACGAA+TGG + chr2_2:17768479-17768498 None:intergenic 45.0%
TGCAGCATAGGAACATCGTT+AGG - chr2_2:17768506-17768525 Msa0241780:intron 45.0%
CAACCCCACCAAACAAGATA+AGG + chr2_2:17769115-17769134 None:intergenic 45.0%
! CTTATCTTGTTTGGTGGGGT+TGG - chr2_2:17769113-17769132 Msa0241780:intron 45.0%
CATCTAGGTGAGATGACTGT+AGG - chr2_2:17769263-17769282 Msa0241780:intron 45.0%
CAGTGACAAGCGATTGTATC+TGG - chr2_2:17769613-17769632 Msa0241780:intron 45.0%
!! AGTTTGGCTTGTCAAGTTGC+AGG - chr2_2:17769924-17769943 Msa0241780:intron 45.0%
TGACGTATTGCGGAGTTTAG+TGG - chr2_2:17769980-17769999 Msa0241780:intron 45.0%
GTGTTTGTTCAAGTCGACGT+AGG - chr2_2:17770172-17770191 Msa0241780:intron 45.0%
TTGTTCAAGTCGACGTAGGA+TGG - chr2_2:17770176-17770195 Msa0241780:intron 45.0%
AGTTGAGCAGGCGATATGAA+GGG + chr2_2:17770260-17770279 None:intergenic 45.0%
TAATGATGTGGCAGTTGAGC+AGG + chr2_2:17770272-17770291 None:intergenic 45.0%
AAGCAAAGGAAAGGAGTGGT+AGG + chr2_2:17770344-17770363 None:intergenic 45.0%
AACAATGGGAAGGGAAGCAA+AGG + chr2_2:17770358-17770377 None:intergenic 45.0%
!!! TTGCAGATTTTGGATTGGCC+AGG - chr2_2:17770632-17770651 Msa0241780:intron 45.0%
!!! TGCAGATTTTGGATTGGCCA+GGG - chr2_2:17770633-17770652 Msa0241780:intron 45.0%
GCTCTAATTAGAGAGGAGTC+AGG - chr2_2:17770778-17770797 Msa0241780:intron 45.0%
TGGATGAGGAAAGACCTGAA+TGG - chr2_2:17771095-17771114 Msa0241780:intron 45.0%
GGTTACTCCCATTTCCATTC+AGG + chr2_2:17771112-17771131 None:intergenic 45.0%
! GTTTGAAACCCAGAAGCACA+AGG + chr2_2:17771157-17771176 None:intergenic 45.0%
GGTTTCAAACTCTCGTGTCA+TGG - chr2_2:17771167-17771186 Msa0241780:intron 45.0%
ATGGTTGAGAAACCAAGGGA+GGG + chr2_2:17771239-17771258 None:intergenic 45.0%
AATGGTTGAGAAACCAAGGG+AGG + chr2_2:17771240-17771259 None:intergenic 45.0%
GGGAAATGGTTGAGAAACCA+AGG + chr2_2:17771244-17771263 None:intergenic 45.0%
ATTTCCCTGAGTTGTGCCTT+GGG - chr2_2:17771257-17771276 Msa0241780:intron 45.0%
! TGGTTTTCATGTGGAGGTCA+TGG + chr2_2:17771303-17771322 None:intergenic 45.0%
! ATGGCATGGTGGTTTTCATG+TGG + chr2_2:17771312-17771331 None:intergenic 45.0%
ACAGCCATGGAAGAATGGAA+TGG + chr2_2:17771372-17771391 None:intergenic 45.0%
ACAGATGACCCTAGCAATGA+AGG + chr2_2:17771521-17771540 None:intergenic 45.0%
TATCTAGCCTCAACCTTGCA+CGG - chr2_2:17771572-17771591 Msa0241780:intron 45.0%
CAAGCAATATTTCCGGAGCT+CGG + chr2_2:17771802-17771821 None:intergenic 45.0%
CACTGACCAAACATCAACTG+GGG + chr2_2:17771843-17771862 None:intergenic 45.0%
CCACTGACCAAACATCAACT+GGG + chr2_2:17771844-17771863 None:intergenic 45.0%
! CCAGTTGATGTTTGGTCAGT+GGG - chr2_2:17771842-17771861 Msa0241780:intron 45.0%
GACTAGCATTCAAAGGGTCA+TGG + chr2_2:17772140-17772159 None:intergenic 45.0%
AGAAAACAGGGGGATTAGAC+AGG + chr2_2:17772215-17772234 None:intergenic 45.0%
! TTGGGAGGGGTAGAGTTTTA+AGG + chr2_2:17772247-17772266 None:intergenic 45.0%
CCTGGCCATGTATCTTCATT+TGG + chr2_2:17772690-17772709 None:intergenic 45.0%
CCAAATGAAGATACATGGCC+AGG - chr2_2:17772687-17772706 Msa0241780:intron 45.0%
TCAGGCAATGAAGTTACTCC+TGG + chr2_2:17772708-17772727 None:intergenic 45.0%
! GATTTGGAACCACAGTTGCT+AGG + chr2_2:17772849-17772868 None:intergenic 45.0%
TTATGCATCCTCTGTATGGC+AGG - chr2_2:17773502-17773521 Msa0241780:intron 45.0%
! CCTGGCAGTAATTCTTTTGG+TGG + chr2_2:17773768-17773787 None:intergenic 45.0%
CCACCAAAAGAATTACTGCC+AGG - chr2_2:17773765-17773784 Msa0241780:CDS 45.0%
! GCTCCTGGCAGTAATTCTTT+TGG + chr2_2:17773771-17773790 None:intergenic 45.0%
!!! ATTTAGTATTATTTTTTTTT+TGG - chr2_2:17768815-17768834 Msa0241780:intron 5.0%
!! AAAAATATATTGATAAATAT+TGG - chr2_2:17773121-17773140 Msa0241780:intron 5.0%
CAGCGAAATCTCACGAATGG+CGG + chr2_2:17768476-17768495 None:intergenic 50.0%
! TTGGTGGTTGTGTGCATGAC+AGG - chr2_2:17769573-17769592 Msa0241780:intron 50.0%
TTGTGTGCATGACAGGTTGC+AGG - chr2_2:17769580-17769599 Msa0241780:intron 50.0%
CAGTTGAGCAGGCGATATGA+AGG + chr2_2:17770261-17770280 None:intergenic 50.0%
AGGGAAGCAAAGGAAAGGAG+TGG + chr2_2:17770348-17770367 None:intergenic 50.0%
TGGGAAGGGAAGCAAAGGAA+AGG + chr2_2:17770353-17770372 None:intergenic 50.0%
!! TTTGGATTGGCCAGGGCATT+TGG - chr2_2:17770640-17770659 Msa0241780:intron 50.0%
GACAGGAATACCAAATGCCC+TGG + chr2_2:17770653-17770672 None:intergenic 50.0%
GAATGGAGGTCACCAGAGAT+AGG - chr2_2:17771053-17771072 Msa0241780:intron 50.0%
CAGTGGCAACATCCTATCTC+TGG + chr2_2:17771068-17771087 None:intergenic 50.0%
AGATAGGATGTTGCCACTGC+TGG - chr2_2:17771069-17771088 Msa0241780:intron 50.0%
! AACCCAGAAGCACAAGGACT+CGG + chr2_2:17771151-17771170 None:intergenic 50.0%
CAAGGCACAACTCAGGGAAA+TGG + chr2_2:17771258-17771277 None:intergenic 50.0%
CATTTCCCTGAGTTGTGCCT+TGG - chr2_2:17771256-17771275 Msa0241780:intron 50.0%
TGCCTTGGGTACCATGAGAA+TGG - chr2_2:17771271-17771290 Msa0241780:intron 50.0%
CACCATTCTCATGGTACCCA+AGG + chr2_2:17771276-17771295 None:intergenic 50.0%
CTTGGGTACCATGAGAATGG+TGG - chr2_2:17771274-17771293 Msa0241780:intron 50.0%
CATGGAAGCCACCATTCTCA+TGG + chr2_2:17771285-17771304 None:intergenic 50.0%
! GCATGGTGGTTTTCATGTGG+AGG + chr2_2:17771309-17771328 None:intergenic 50.0%
GGCTATATGCTATGGCATGG+TGG + chr2_2:17771323-17771342 None:intergenic 50.0%
TCGGCCATTCCATTCTTCCA+TGG - chr2_2:17771365-17771384 Msa0241780:intron 50.0%
ATCTAGCCTCAACCTTGCAC+GGG - chr2_2:17771573-17771592 Msa0241780:intron 50.0%
! GTTACTGAAGTTTGGGGCAG+GGG + chr2_2:17771606-17771625 None:intergenic 50.0%
! GGTTACTGAAGTTTGGGGCA+GGG + chr2_2:17771607-17771626 None:intergenic 50.0%
! AGGTTACTGAAGTTTGGGGC+AGG + chr2_2:17771608-17771627 None:intergenic 50.0%
CGAGCTCCGGAAATATTGCT+TGG - chr2_2:17771800-17771819 Msa0241780:intron 50.0%
! CCCAGTTGATGTTTGGTCAG+TGG - chr2_2:17771841-17771860 Msa0241780:intron 50.0%
CCCACTGACCAAACATCAAC+TGG + chr2_2:17771845-17771864 None:intergenic 50.0%
CATCAATCTCGGAATCCCCA+GGG + chr2_2:17771907-17771926 None:intergenic 50.0%
TCATCAATCTCGGAATCCCC+AGG + chr2_2:17771908-17771927 None:intergenic 50.0%
CAGGCAGATCAGCAAGAATG+AGG + chr2_2:17772196-17772215 None:intergenic 50.0%
ATTTCCCAGGTGGCCATCTA+AGG - chr2_2:17772740-17772759 Msa0241780:intron 50.0%
CTTACCTTAGATGGCCACCT+GGG + chr2_2:17772747-17772766 None:intergenic 50.0%
ACTTACCTTAGATGGCCACC+TGG + chr2_2:17772748-17772767 None:intergenic 50.0%
TTTGCAGGACCTAGCAACTG+TGG - chr2_2:17772837-17772856 Msa0241780:intron 50.0%
GTTCCAAATCTTGAGCCAGC+TGG - chr2_2:17772859-17772878 Msa0241780:intron 50.0%
! AGACCAGCTGGCTCAAGATT+TGG + chr2_2:17772865-17772884 None:intergenic 50.0%
CCATCCTAAGAGACTGAAGC+CGG + chr2_2:17772981-17773000 None:intergenic 50.0%
CGGCTTCAGTCTCTTAGGAT+GGG - chr2_2:17772979-17772998 Msa0241780:intron 50.0%
CCAGCTTGAGATGCAGAAGA+GGG + chr2_2:17773481-17773500 None:intergenic 50.0%
ACCAGCTTGAGATGCAGAAG+AGG + chr2_2:17773482-17773501 None:intergenic 50.0%
ACTCCAGAGCATGCTTTGCT+TGG - chr2_2:17773739-17773758 Msa0241780:CDS 50.0%
GATCCAAGCAAAGCATGCTC+TGG + chr2_2:17773745-17773764 None:intergenic 50.0%
CGGGAGAGAGAGATGAGTCT+CGG - chr2_2:17768108-17768127 Msa0241780:three_prime_UTR 55.0%
ATCTCACGAATGGCGGTGCT+AGG + chr2_2:17768469-17768488 None:intergenic 55.0%
TTTGGTGGGGTTGGATGCGT+GGG - chr2_2:17769122-17769141 Msa0241780:intron 55.0%
GATGTTGCCACTGCTGGAGA+TGG - chr2_2:17771075-17771094 Msa0241780:intron 55.0%
TCCTCATCCATCTCCAGCAG+TGG + chr2_2:17771085-17771104 None:intergenic 55.0%
CTCGGCCTCCGTAACTCATT+TGG + chr2_2:17771133-17771152 None:intergenic 55.0%
CTTTCTGTTCCTCCCTCCCT+TGG - chr2_2:17771224-17771243 Msa0241780:intron 55.0%
GTTGAGAAACCAAGGGAGGG+AGG + chr2_2:17771236-17771255 None:intergenic 55.0%
GGTACCCAAGGCACAACTCA+GGG + chr2_2:17771264-17771283 None:intergenic 55.0%
TGGTACCCAAGGCACAACTC+AGG + chr2_2:17771265-17771284 None:intergenic 55.0%
! GGTTTTCCCGTGCAAGGTTG+AGG + chr2_2:17771582-17771601 None:intergenic 55.0%
! TACACTGTGGTACCGAGCTC+CGG - chr2_2:17771787-17771806 Msa0241780:intron 55.0%
AATCGGCGACCTCTATTCCC+TGG - chr2_2:17771887-17771906 Msa0241780:intron 55.0%
ATCGGCGACCTCTATTCCCT+GGG - chr2_2:17771888-17771907 Msa0241780:intron 55.0%
TCGGAATCCCCAGGGAATAG+AGG + chr2_2:17771899-17771918 None:intergenic 55.0%
ACTGAAGCCGGCAACAATCG+AGG + chr2_2:17772969-17772988 None:intergenic 55.0%
!! GTTGCCGGCTTCAGTCTCTT+AGG - chr2_2:17772974-17772993 Msa0241780:intron 55.0%
CCGGCTTCAGTCTCTTAGGA+TGG - chr2_2:17772978-17772997 Msa0241780:intron 55.0%
CCCTCTTCTGCATCTCAAGC+TGG - chr2_2:17773478-17773497 Msa0241780:intron 55.0%
!! AATTACTGCCAGGAGCGCTG+TGG - chr2_2:17773775-17773794 Msa0241780:CDS 55.0%
! GTTTGGTGGGGTTGGATGCG+TGG - chr2_2:17769121-17769140 Msa0241780:intron 60.0%
GCCACTGCTGGAGATGGATG+AGG - chr2_2:17771081-17771100 Msa0241780:intron 60.0%
AGGCCGAGTCCTTGTGCTTC+TGG - chr2_2:17771145-17771164 Msa0241780:intron 60.0%
GGCCGAGTCCTTGTGCTTCT+GGG - chr2_2:17771146-17771165 Msa0241780:intron 60.0%
! AGGGGAGGTTTTCCCGTGCA+AGG + chr2_2:17771588-17771607 None:intergenic 60.0%
! ACTGAAGTTTGGGGCAGGGG+AGG + chr2_2:17771603-17771622 None:intergenic 60.0%
TCGGCGACCTCTATTCCCTG+GGG - chr2_2:17771889-17771908 Msa0241780:intron 60.0%
TTCATGCTCCACAGCGCTCC+TGG + chr2_2:17773786-17773805 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 17768086 17774130 17768086 ID=Msa0241780;Name=Msa0241780
chr2_2 mRNA 17768086 17774130 17768086 ID=Msa0241780-mRNA-1;Parent=Msa0241780;Name=Msa0241780-mRNA-1;_AED=0.16;_eAED=0.16;_QI=160|0.83|1|1|1|1|7|295|236
chr2_2 exon 17768086 17768470 17768086 ID=Msa0241780-mRNA-1:exon:7228;Parent=Msa0241780-mRNA-1
chr2_2 exon 17769319 17769372 17769319 ID=Msa0241780-mRNA-1:exon:7227;Parent=Msa0241780-mRNA-1
chr2_2 exon 17769455 17769542 17769455 ID=Msa0241780-mRNA-1:exon:7226;Parent=Msa0241780-mRNA-1
chr2_2 exon 17770271 17770434 17770271 ID=Msa0241780-mRNA-1:exon:7225;Parent=Msa0241780-mRNA-1
chr2_2 exon 17772501 17772621 17772501 ID=Msa0241780-mRNA-1:exon:7224;Parent=Msa0241780-mRNA-1
chr2_2 exon 17773689 17773873 17773689 ID=Msa0241780-mRNA-1:exon:7223;Parent=Msa0241780-mRNA-1
chr2_2 exon 17773962 17774130 17773962 ID=Msa0241780-mRNA-1:exon:7222;Parent=Msa0241780-mRNA-1
chr2_2 five_prime_UTR 17773971 17774130 17773971 ID=Msa0241780-mRNA-1:five_prime_utr;Parent=Msa0241780-mRNA-1
chr2_2 CDS 17773962 17773970 17773962 ID=Msa0241780-mRNA-1:cds;Parent=Msa0241780-mRNA-1
chr2_2 CDS 17773689 17773873 17773689 ID=Msa0241780-mRNA-1:cds;Parent=Msa0241780-mRNA-1
chr2_2 CDS 17772501 17772621 17772501 ID=Msa0241780-mRNA-1:cds;Parent=Msa0241780-mRNA-1
chr2_2 CDS 17770271 17770434 17770271 ID=Msa0241780-mRNA-1:cds;Parent=Msa0241780-mRNA-1
chr2_2 CDS 17769455 17769542 17769455 ID=Msa0241780-mRNA-1:cds;Parent=Msa0241780-mRNA-1
chr2_2 CDS 17769319 17769372 17769319 ID=Msa0241780-mRNA-1:cds;Parent=Msa0241780-mRNA-1
chr2_2 CDS 17768381 17768470 17768381 ID=Msa0241780-mRNA-1:cds;Parent=Msa0241780-mRNA-1
chr2_2 three_prime_UTR 17768086 17768380 17768086 ID=Msa0241780-mRNA-1:three_prime_utr;Parent=Msa0241780-mRNA-1
Gene Sequence

>Msa0241780

ATGGAGCAATACGAAAAGGTGGAGAAGATTGGTGAAGGAACATACGGCGTCGTTTACAAGGCACGTGACCGTGTTACGAATGAAACCATCGCGTTGAAGAAGATTCGACTTGAACAGGAAGATGAAGGTGTTCCTAGCACCGCCATTCGTGAGATTTCGCTGCTTAAAGAAATGCAGCATAGGAACATCGTTAGGTTGCAGGATGTAGTGCACAGTGACAAGCGATTGTATCTGGTTTTTGAGTATCTGGACTTAGATCTGAAGAAGCATATGGATTCATCTCCTGAGTTTATAAAAGATCCGCGACAAGTAAAAGTAGTTACACTGTGGTACCGAGCTCCGGAAATATTGCTTGGATCTCGTCATTATTCTACCCCAGTTGATGTTTGGTCAGTGGGATGTATATTTGCAGAGATGGCAAATCGGCGACCTCTATTCCCTGGGGATTCCGAGATTGATGAGTTATTTAAAATATTCAGAATCTTGGGTACACCAAATGAAGATACATGGCCAGGAGTAACTTCATTGCCTGATTTTAAATCAACATTTCCCAGGTGGCCATCTAAGGACCTAGCAACTGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTCTTAACAGCATGCTTTGCTTGGATCCCACCAAAAGAATTACTGCCAGGAGCGCTGTGGAGCATGAATATTTCAAAGACATTAAGTTTGTACCCTAA
Protein sequence

>Msa0241780

MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSDKRLYLVFEYLDLDLKKHMDSSPEFIKDPRQVKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMANRRPLFPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSTFPRWPSKDLATVVPNLEPAGLDLLNSMLCLDPTKRITARSAVEHEYFKDIKFVP*