Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0441130 | XP_003598073.1 | 97.906 | 382 | 8 | 0 | 1 | 382 | 1 | 382 | 0.0 | 775 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0441130 | sp|A1RYE4|GYAR_THEPD | 34.211 | 266 | 150 | 5 | 106 | 363 | 58 | 306 | 1.58e-38 | 144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0441130 | G7J081 | 97.906 | 382 | 8 | 0 | 1 | 382 | 1 | 382 | 0.0 | 775 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0441130 | 0.832392 | 9.703812e-56 | -8.615850e-47 |
| Msa0002540 | Msa0441130 | 0.804513 | 2.083381e-49 | -8.615850e-47 |
| Msa0004980 | Msa0441130 | 0.805387 | 1.368450e-49 | -8.615850e-47 |
| Msa0016670 | Msa0441130 | 0.839098 | 1.941327e-57 | -8.615850e-47 |
| Msa0021810 | Msa0441130 | 0.813569 | 2.395559e-51 | -8.615850e-47 |
| Msa0032260 | Msa0441130 | 0.822672 | 2.090317e-53 | -8.615850e-47 |
| Msa0032840 | Msa0441130 | -0.823516 | 1.328076e-53 | -8.615850e-47 |
| Msa0073670 | Msa0441130 | 0.842295 | 2.822060e-58 | -8.615850e-47 |
| Msa0074320 | Msa0441130 | 0.809203 | 2.124845e-50 | -8.615850e-47 |
| Msa0077200 | Msa0441130 | 0.801731 | 7.839761e-49 | -8.615850e-47 |
| Msa0082280 | Msa0441130 | 0.819325 | 1.232613e-52 | -8.615850e-47 |
| Msa0094120 | Msa0441130 | 0.816820 | 4.540418e-52 | -8.615850e-47 |
| Msa0094470 | Msa0441130 | 0.815790 | 7.719236e-52 | -8.615850e-47 |
| Msa0097850 | Msa0441130 | 0.802525 | 5.382298e-49 | -8.615850e-47 |
| Msa0110970 | Msa0441130 | 0.832096 | 1.148905e-55 | -8.615850e-47 |
| Msa0124340 | Msa0441130 | 0.803969 | 2.704106e-49 | -8.615850e-47 |
| Msa0124990 | Msa0441130 | 0.803481 | 3.415766e-49 | -8.615850e-47 |
| Msa0127310 | Msa0441130 | 0.813169 | 2.933272e-51 | -8.615850e-47 |
| Msa0138920 | Msa0441130 | 0.800070 | 1.712414e-48 | -8.615850e-47 |
| Msa0140570 | Msa0441130 | 0.826043 | 3.368949e-54 | -8.615850e-47 |
| Msa0149390 | Msa0441130 | 0.805831 | 1.104081e-49 | -8.615850e-47 |
| Msa0174770 | Msa0441130 | 0.811751 | 5.984183e-51 | -8.615850e-47 |
| Msa0183830 | Msa0441130 | 0.801645 | 8.164914e-49 | -8.615850e-47 |
| Msa0185900 | Msa0441130 | 0.804474 | 2.122802e-49 | -8.615850e-47 |
| Msa0187690 | Msa0441130 | 0.808065 | 3.718312e-50 | -8.615850e-47 |
| Msa0192510 | Msa0441130 | 0.807944 | 3.947092e-50 | -8.615850e-47 |
| Msa0193120 | Msa0441130 | 0.815765 | 7.816970e-52 | -8.615850e-47 |
| Msa0199690 | Msa0441130 | 0.804018 | 2.641892e-49 | -8.615850e-47 |
| Msa0199880 | Msa0441130 | 0.817551 | 3.110383e-52 | -8.615850e-47 |
| Msa0203310 | Msa0441130 | 0.800859 | 1.182616e-48 | -8.615850e-47 |
| Msa0225740 | Msa0441130 | 0.820784 | 5.713073e-53 | -8.615850e-47 |
| Msa0226460 | Msa0441130 | 0.822431 | 2.377102e-53 | -8.615850e-47 |
| Msa0226470 | Msa0441130 | 0.831009 | 2.128257e-55 | -8.615850e-47 |
| Msa0230550 | Msa0441130 | -0.818462 | 1.935868e-52 | -8.615850e-47 |
| Msa0236270 | Msa0441130 | 0.833381 | 5.509145e-56 | -8.615850e-47 |
| Msa0369050 | Msa0441130 | 0.825836 | 3.772132e-54 | -8.615850e-47 |
| Msa0369220 | Msa0441130 | 0.844376 | 7.853555e-59 | -8.615850e-47 |
| Msa0376040 | Msa0441130 | 0.815064 | 1.119517e-51 | -8.615850e-47 |
| Msa0376690 | Msa0441130 | 0.831959 | 1.241490e-55 | -8.615850e-47 |
| Msa0402330 | Msa0441130 | 0.828861 | 7.103451e-55 | -8.615850e-47 |
| Msa0410500 | Msa0441130 | 0.805279 | 1.441226e-49 | -8.615850e-47 |
| Msa0414950 | Msa0441130 | -0.804202 | 2.418696e-49 | -8.615850e-47 |
| Msa0423040 | Msa0441130 | 0.814105 | 1.824605e-51 | -8.615850e-47 |
| Msa0425220 | Msa0441130 | 0.801915 | 7.186990e-49 | -8.615850e-47 |
| Msa0425940 | Msa0441130 | 0.812189 | 4.806006e-51 | -8.615850e-47 |
| Msa0426160 | Msa0441130 | 0.804156 | 2.473318e-49 | -8.615850e-47 |
| Msa0441130 | Msa0458060 | 0.808720 | 2.696114e-50 | -8.615850e-47 |
| Msa0441130 | Msa0471590 | 0.814069 | 1.858783e-51 | -8.615850e-47 |
| Msa0441130 | Msa0480000 | 0.815030 | 1.139279e-51 | -8.615850e-47 |
| Msa0441130 | Msa0488020 | 0.932062 | 1.494061e-94 | -8.615850e-47 |
| Msa0441130 | Msa0508590 | 0.842662 | 2.254572e-58 | -8.615850e-47 |
| Msa0441130 | Msa0508630 | 0.842808 | 2.061780e-58 | -8.615850e-47 |
| Msa0441130 | Msa0508870 | 0.828642 | 8.025524e-55 | -8.615850e-47 |
| Msa0441130 | Msa0509390 | 0.802649 | 5.075494e-49 | -8.615850e-47 |
| Msa0441130 | Msa0516040 | 0.812820 | 3.498356e-51 | -8.615850e-47 |
| Msa0441130 | Msa0520070 | 0.803476 | 3.422572e-49 | -8.615850e-47 |
| Msa0441130 | Msa0521880 | 0.807768 | 4.300532e-50 | -8.615850e-47 |
| Msa0441130 | Msa0526540 | 0.804624 | 1.975374e-49 | -8.615850e-47 |
| Msa0441130 | Msa0541360 | 0.810845 | 9.412257e-51 | -8.615850e-47 |
| Msa0441130 | Msa0552810 | 0.802591 | 5.216909e-49 | -8.615850e-47 |
| Msa0441130 | Msa0555910 | 0.819638 | 1.045629e-52 | -8.615850e-47 |
| Msa0441130 | Msa0571920 | 0.802304 | 5.977340e-49 | -8.615850e-47 |
| Msa0441130 | Msa0576940 | 0.813544 | 2.426202e-51 | -8.615850e-47 |
| Msa0441130 | Msa0609450 | 0.808306 | 3.304174e-50 | -8.615850e-47 |
| Msa0441130 | Msa0618040 | 0.814502 | 1.491203e-51 | -8.615850e-47 |
| Msa0441130 | Msa0620990 | 0.809807 | 1.576476e-50 | -8.615850e-47 |
| Msa0441130 | Msa0622960 | 0.831872 | 1.304867e-55 | -8.615850e-47 |
| Msa0441130 | Msa0623700 | 0.808646 | 2.796505e-50 | -8.615850e-47 |
| Msa0441130 | Msa0650090 | 0.809262 | 2.064407e-50 | -8.615850e-47 |
| Msa0441130 | Msa0673010 | -0.810993 | 8.742020e-51 | -8.615850e-47 |
| Msa0441130 | Msa0677290 | 0.832918 | 7.185622e-56 | -8.615850e-47 |
| Msa0441130 | Msa0680240 | 0.803292 | 3.737902e-49 | -8.615850e-47 |
| Msa0441130 | Msa0687630 | 0.825200 | 5.336480e-54 | -8.615850e-47 |
| Msa0441130 | Msa0688960 | 0.813371 | 2.647757e-51 | -8.615850e-47 |
| Msa0441130 | Msa0692080 | 0.828889 | 6.993611e-55 | -8.615850e-47 |
| Msa0441130 | Msa0696620 | 0.812030 | 5.204618e-51 | -8.615850e-47 |
| Msa0441130 | Msa0718740 | 0.802472 | 5.520560e-49 | -8.615850e-47 |
| Msa0441130 | Msa0747700 | 0.806965 | 6.367529e-50 | -8.615850e-47 |
| Msa0441130 | Msa0758270 | -0.807493 | 4.919973e-50 | -8.615850e-47 |
| Msa0441130 | Msa0760380 | 0.805906 | 1.064482e-49 | -8.615850e-47 |
| Msa0441130 | Msa0787750 | 0.825655 | 4.164526e-54 | -8.615850e-47 |
| Msa0441130 | Msa0796530 | 0.832206 | 1.079063e-55 | -8.615850e-47 |
| Msa0441130 | Msa0813720 | 0.820391 | 7.031807e-53 | -8.615850e-47 |
| Msa0441130 | Msa0823090 | 0.800066 | 1.715445e-48 | -8.615850e-47 |
| Msa0441130 | Msa0824640 | 0.816472 | 5.434248e-52 | -8.615850e-47 |
| Msa0441130 | Msa0825310 | 0.804647 | 1.953669e-49 | -8.615850e-47 |
| Msa0441130 | Msa0831870 | 0.806609 | 7.569643e-50 | -8.615850e-47 |
| Msa0441130 | Msa0837660 | 0.812723 | 3.673629e-51 | -8.615850e-47 |
| Msa0441130 | Msa0847080 | 0.802216 | 6.232153e-49 | -8.615850e-47 |
| Msa0441130 | Msa0850960 | 0.809272 | 2.054240e-50 | -8.615850e-47 |
| Msa0441130 | Msa0864010 | 0.821194 | 4.597274e-53 | -8.615850e-47 |
| Msa0441130 | Msa0925440 | 0.801530 | 8.622506e-49 | -8.615850e-47 |
| Msa0441130 | Msa0937670 | 0.808449 | 3.081082e-50 | -8.615850e-47 |
| Msa0441130 | Msa0944190 | 0.809414 | 1.914404e-50 | -8.615850e-47 |
| Msa0441130 | Msa1012700 | 0.822599 | 2.173133e-53 | -8.615850e-47 |
| Msa0441130 | Msa1012810 | 0.806669 | 7.351186e-50 | -8.615850e-47 |
| Msa0441130 | Msa1019240 | 0.824912 | 6.242760e-54 | -8.615850e-47 |
| Msa0441130 | Msa1019260 | 0.824136 | 9.506108e-54 | -8.615850e-47 |
| Msa0441130 | Msa1054240 | 0.814022 | 1.903759e-51 | -8.615850e-47 |
| Msa0441130 | Msa1082700 | 0.834947 | 2.232141e-56 | -8.615850e-47 |
| Msa0441130 | Msa1094420 | 0.835537 | 1.584461e-56 | -8.615850e-47 |
| Msa0441130 | Msa1104140 | 0.826249 | 3.008839e-54 | -8.615850e-47 |
| Msa0441130 | Msa1104210 | 0.829985 | 3.789305e-55 | -8.615850e-47 |
| Msa0441130 | Msa1106700 | 0.801027 | 1.092685e-48 | -8.615850e-47 |
| Msa0441130 | Msa1115770 | 0.841023 | 6.107382e-58 | -8.615850e-47 |
| Msa0441130 | Msa1126510 | 0.820378 | 7.079118e-53 | -8.615850e-47 |
| Msa0441130 | Msa1126770 | 0.805551 | 1.264108e-49 | -8.615850e-47 |
| Msa0441130 | Msa1127890 | 0.818042 | 2.409557e-52 | -8.615850e-47 |
| Msa0441130 | Msa1134110 | 0.830055 | 3.642164e-55 | -8.615850e-47 |
| Msa0441130 | Msa1143840 | 0.803957 | 2.720418e-49 | -8.615850e-47 |
| Msa0441130 | Msa1154210 | 0.801026 | 1.093333e-48 | -8.615850e-47 |
| Msa0441130 | Msa1165870 | 0.825948 | 3.547572e-54 | -8.615850e-47 |
| Msa0441130 | Msa1166340 | 0.800636 | 1.313609e-48 | -8.615850e-47 |
| Msa0441130 | Msa1166860 | 0.821468 | 3.974427e-53 | -8.615850e-47 |
| Msa0441130 | Msa1168950 | 0.807835 | 4.162906e-50 | -8.615850e-47 |
| Msa0441130 | Msa1169040 | 0.804523 | 2.074225e-49 | -8.615850e-47 |
| Msa0441130 | Msa1179950 | 0.800533 | 1.378295e-48 | -8.615850e-47 |
| Msa0441130 | Msa1199990 | 0.803684 | 3.099971e-49 | -8.615850e-47 |
| Msa0441130 | Msa1203250 | 0.801022 | 1.095602e-48 | -8.615850e-47 |
| Msa0441130 | Msa1252190 | 0.835662 | 1.472977e-56 | -8.615850e-47 |
| Msa0441130 | Msa1274060 | 0.802258 | 6.110846e-49 | -8.615850e-47 |
| Msa0441130 | Msa1292830 | 0.828293 | 9.742161e-55 | -8.615850e-47 |
| Msa0441130 | Msa1304820 | 0.800138 | 1.658748e-48 | -8.615850e-47 |
| Msa0441130 | Msa1307950 | 0.809526 | 1.811595e-50 | -8.615850e-47 |
| Msa0441130 | Msa1335940 | 0.822321 | 2.521746e-53 | -8.615850e-47 |
| Msa0441130 | Msa1359390 | 0.807971 | 3.895240e-50 | -8.615850e-47 |
| Msa0441130 | Msa1363330 | 0.802821 | 4.677688e-49 | -8.615850e-47 |
| Msa0441130 | Msa1370860 | 0.828614 | 8.150227e-55 | -8.615850e-47 |
| Msa0441130 | Msa1373330 | 0.843621 | 1.252146e-58 | -8.615850e-47 |
| Msa0441130 | Msa1379760 | 0.806183 | 9.307275e-50 | -8.615850e-47 |
| Msa0441130 | Msa1382410 | 0.804699 | 1.906051e-49 | -8.615850e-47 |
| Msa0441130 | Msa1385770 | 0.801730 | 7.844428e-49 | -8.615850e-47 |
| Msa0441130 | Msa1386600 | 0.803531 | 3.334599e-49 | -8.615850e-47 |
| Msa0441130 | Msa1392200 | 0.828771 | 7.471559e-55 | -8.615850e-47 |
| Msa0441130 | Msa1394500 | 0.800193 | 1.616701e-48 | -8.615850e-47 |
| Msa0441130 | Msa1397810 | 0.809891 | 1.511979e-50 | -8.615850e-47 |
| Msa0441130 | Msa1404190 | 0.833527 | 5.065715e-56 | -8.615850e-47 |
| Msa0441130 | Msa1406040 | 0.804553 | 2.043817e-49 | -8.615850e-47 |
| Msa0441130 | Msa1415640 | 0.814745 | 1.317486e-51 | -8.615850e-47 |
| Msa0441130 | Msa1417870 | 0.836710 | 7.976791e-57 | -8.615850e-47 |
| Msa0441130 | Msa1419800 | -0.816589 | 5.115572e-52 | -8.615850e-47 |
| Msa0441130 | Msa1442850 | 0.829700 | 4.446143e-55 | -8.615850e-47 |
| Msa0441130 | Msa1444310 | 0.800557 | 1.363239e-48 | -8.615850e-47 |
| Msa0441130 | Msa1460470 | 0.811390 | 7.169975e-51 | -8.615850e-47 |
| Msa0241780 | Msa0441130 | 0.846209 | 2.507681e-59 | -8.615850e-47 |
| Msa0241800 | Msa0441130 | 0.856087 | 4.077359e-62 | -8.615850e-47 |
| Msa0242410 | Msa0441130 | 0.801505 | 8.722041e-49 | -8.615850e-47 |
| Msa0242680 | Msa0441130 | 0.811683 | 6.191569e-51 | -8.615850e-47 |
| Msa0260240 | Msa0441130 | 0.800574 | 1.352227e-48 | -8.615850e-47 |
| Msa0262310 | Msa0441130 | 0.805637 | 1.212412e-49 | -8.615850e-47 |
| Msa0264570 | Msa0441130 | 0.826826 | 2.192098e-54 | -8.615850e-47 |
| Msa0294390 | Msa0441130 | 0.817285 | 3.569173e-52 | -8.615850e-47 |
| Msa0294560 | Msa0441130 | -0.807051 | 6.104359e-50 | -8.615850e-47 |
| Msa0304260 | Msa0441130 | 0.801772 | 7.691853e-49 | -8.615850e-47 |
| Msa0304590 | Msa0441130 | 0.802384 | 5.756618e-49 | -8.615850e-47 |
| Msa0317250 | Msa0441130 | 0.813528 | 2.445858e-51 | -8.615850e-47 |
| Msa0317310 | Msa0441130 | 0.802397 | 5.719282e-49 | -8.615850e-47 |
| Msa0322890 | Msa0441130 | 0.854722 | 1.018829e-61 | -8.615850e-47 |
| Msa0332920 | Msa0441130 | 0.838450 | 2.856006e-57 | -8.615850e-47 |
| Msa0337650 | Msa0441130 | 0.820253 | 7.562924e-53 | -8.615850e-47 |
| Msa0355270 | Msa0441130 | 0.827535 | 1.482823e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0441130 | MtrunA17_Chr3g0077771 | 97.906 | 382 | 8 | 0 | 1 | 382 | 1 | 382 | 0.0 | 775 |
| Msa0441130 | MtrunA17_Chr4g0000511 | 31.496 | 254 | 154 | 5 | 117 | 367 | 151 | 387 | 9.39e-30 | 120 |
| Msa0441130 | MtrunA17_Chr1g0208141 | 30.435 | 253 | 158 | 3 | 117 | 367 | 118 | 354 | 1.20e-29 | 120 |
| Msa0441130 | MtrunA17_Chr8g0351141 | 26.286 | 350 | 210 | 11 | 45 | 375 | 1 | 321 | 1.08e-27 | 111 |
| Msa0441130 | MtrunA17_Chr8g0351121 | 25.706 | 354 | 215 | 10 | 28 | 362 | 17 | 341 | 2.66e-27 | 110 |
| Msa0441130 | MtrunA17_Chr8g0351111 | 27.174 | 276 | 174 | 6 | 106 | 375 | 64 | 318 | 7.61e-26 | 106 |
| Msa0441130 | MtrunA17_Chr4g0004681 | 26.493 | 268 | 177 | 3 | 108 | 375 | 58 | 305 | 4.89e-25 | 103 |
| Msa0441130 | MtrunA17_Chr4g0004711 | 28.517 | 263 | 155 | 6 | 108 | 362 | 58 | 295 | 4.16e-24 | 101 |
| Msa0441130 | MtrunA17_Chr4g0004721 | 27.519 | 258 | 164 | 5 | 108 | 362 | 59 | 296 | 5.52e-24 | 100 |
| Msa0441130 | MtrunA17_Chr6g0450811 | 31.086 | 267 | 150 | 9 | 112 | 366 | 116 | 360 | 9.98e-22 | 95.5 |
| Msa0441130 | MtrunA17_Chr2g0331641 | 26.217 | 267 | 174 | 4 | 99 | 362 | 50 | 296 | 1.38e-20 | 91.3 |
| Msa0441130 | MtrunA17_Chr6g0450821 | 28.716 | 296 | 155 | 12 | 86 | 366 | 57 | 311 | 7.88e-17 | 80.9 |
| Msa0441130 | MtrunA17_Chr7g0246361 | 26.740 | 273 | 152 | 9 | 118 | 380 | 57 | 291 | 2.45e-16 | 79.0 |
| Msa0441130 | MtrunA17_Chr4g0004741 | 28.044 | 271 | 172 | 5 | 108 | 375 | 58 | 308 | 3.12e-15 | 75.9 |
| Msa0441130 | MtrunA17_Chr1g0210971 | 26.493 | 268 | 180 | 7 | 119 | 375 | 88 | 349 | 1.50e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0441130 | AT1G72190.1 | 63.158 | 380 | 130 | 3 | 5 | 382 | 2 | 373 | 2.58e-174 | 490 |
| Msa0441130 | AT1G17745.1 | 31.707 | 287 | 174 | 8 | 85 | 366 | 111 | 380 | 3.08e-31 | 125 |
| Msa0441130 | AT4G34200.1 | 31.102 | 254 | 155 | 5 | 117 | 367 | 124 | 360 | 1.51e-29 | 120 |
| Msa0441130 | AT1G17745.2 | 29.299 | 314 | 173 | 9 | 85 | 366 | 111 | 407 | 1.87e-28 | 117 |
| Msa0441130 | AT2G45630.2 | 28.897 | 263 | 162 | 5 | 118 | 375 | 91 | 333 | 7.26e-27 | 109 |
| Msa0441130 | AT3G19480.1 | 30.709 | 254 | 156 | 5 | 117 | 367 | 109 | 345 | 1.91e-26 | 111 |
| Msa0441130 | AT1G12550.1 | 27.376 | 263 | 163 | 7 | 105 | 361 | 62 | 302 | 8.67e-23 | 98.2 |
| Msa0441130 | AT5G14780.3 | 32.773 | 238 | 128 | 8 | 125 | 351 | 101 | 317 | 1.20e-22 | 98.2 |
| Msa0441130 | AT5G14780.2 | 32.773 | 238 | 128 | 8 | 125 | 351 | 113 | 329 | 1.59e-22 | 98.2 |
| Msa0441130 | AT5G14780.1 | 33.473 | 239 | 125 | 9 | 125 | 351 | 127 | 343 | 1.78e-22 | 98.2 |
| Msa0441130 | AT1G79870.1 | 28.364 | 275 | 173 | 8 | 108 | 378 | 58 | 312 | 1.73e-20 | 91.3 |
| Msa0441130 | AT1G79870.2 | 25.735 | 272 | 165 | 7 | 108 | 378 | 58 | 293 | 4.80e-16 | 78.2 |
| Msa0441130 | AT1G68010.1 | 26.966 | 267 | 180 | 6 | 119 | 375 | 88 | 349 | 7.69e-15 | 75.9 |
| Msa0441130 | AT1G68010.3 | 27.027 | 259 | 174 | 6 | 119 | 367 | 88 | 341 | 2.40e-14 | 73.9 |
| Msa0441130 | AT1G68010.2 | 26.866 | 268 | 180 | 7 | 119 | 375 | 88 | 350 | 2.47e-13 | 71.2 |
Find 86 sgRNAs with CRISPR-Local
Find 474 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTATCGGTGATACTTTATT+TGG | 0.071786 | 3_3:-9425550 | Msa0441130:CDS |
| GATAATGTAGATATTCATTT+TGG | 0.088675 | 3_3:-9424554 | Msa0441130:intron |
| CAAACATCATTCATCTTATT+TGG | 0.131019 | 3_3:+9422484 | None:intergenic |
| CTTCATTTCTTCCATGAAAA+AGG | 0.182361 | 3_3:-9423995 | Msa0441130:intron |
| AAGTAAGATAGTAATTATTT+TGG | 0.251060 | 3_3:-9429841 | Msa0441130:five_prime_UTR |
| TTTATTTCAGGGTGCCCTTC+TGG | 0.268864 | 3_3:-9423106 | Msa0441130:intron |
| AAATTTCAATATCTGATCAT+TGG | 0.336562 | 3_3:+9422972 | None:intergenic |
| TCCAAGCTTCCTTTGCTGTA+TGG | 0.363828 | 3_3:+9425576 | None:intergenic |
| AAGACCCAACATTAGATATA+TGG | 0.364315 | 3_3:+9426384 | None:intergenic |
| CTATCGGTGATACTTTATTT+GGG | 0.376577 | 3_3:-9425549 | Msa0441130:CDS |
| AATTTCAATATCTGATCATT+GGG | 0.380747 | 3_3:+9422973 | None:intergenic |
| AGAGAAGAGAAGTGAGTGTT+GGG | 0.398307 | 3_3:+9429729 | None:intergenic |
| CTCCTAAGTGTCCGGATTCA+AGG | 0.399021 | 3_3:+9423034 | None:intergenic |
| ATCATGACTCCTCATATTGC+AGG | 0.400259 | 3_3:-9422940 | Msa0441130:CDS |
| GCACGGCGATTGAAACCATT+TGG | 0.401430 | 3_3:-9424505 | Msa0441130:CDS |
| TACTACACAAACATGATAGT+TGG | 0.402501 | 3_3:+9426670 | None:intergenic |
| ATTGAGTTAGTCAATTGAAT+TGG | 0.403788 | 3_3:-9422654 | Msa0441130:exon |
| ATCTGATCATTGGGATCAAA+TGG | 0.411289 | 3_3:+9422982 | None:intergenic |
| AGGATCCCCAGTGGTGCTAC+TGG | 0.419307 | 3_3:-9426433 | Msa0441130:CDS |
| TAGAGATGTACCTTGATAGA+TGG | 0.426362 | 3_3:+9428602 | None:intergenic |
| TTCAGTTGCATGTGCTGAAA+TGG | 0.438602 | 3_3:-9426407 | Msa0441130:CDS |
| TAGAGAAGAGAAGTGAGTGT+TGG | 0.439410 | 3_3:+9429728 | None:intergenic |
| CTTATAATGCAGTATGGTGT+TGG | 0.439984 | 3_3:-9426596 | Msa0441130:CDS |
| AACCTTAGCCATGGATCTAT+AGG | 0.450234 | 3_3:+9422903 | None:intergenic |
| TATTGCTACAAAGCGGAGTT+GGG | 0.456275 | 3_3:-9424473 | Msa0441130:CDS |
| ATGAAGCTTATAATGCAGTA+TGG | 0.460758 | 3_3:-9426602 | Msa0441130:CDS |
| CCTTGGGAATTTCTTCCAAC+GGG | 0.461257 | 3_3:+9426699 | None:intergenic |
| TCCATACAGCAAAGGAAGCT+TGG | 0.462894 | 3_3:-9425577 | Msa0441130:CDS |
| ATGATAGTTGGCAATAGCCT+TGG | 0.466311 | 3_3:+9426682 | None:intergenic |
| AGTAAACTGAGATAAATAAC+AGG | 0.467008 | 3_3:+9422450 | None:intergenic |
| TCCTAGCCCTCCTAAGTGTC+CGG | 0.468903 | 3_3:+9423026 | None:intergenic |
| AAAATCTGATGGAGAGAAAT+GGG | 0.472016 | 3_3:-9428727 | Msa0441130:CDS |
| CATGCTGGAAATCCTTTGAC+AGG | 0.473055 | 3_3:-9422678 | Msa0441130:CDS |
| TTATTGCTACAAAGCGGAGT+TGG | 0.473922 | 3_3:-9424474 | Msa0441130:CDS |
| AATACACAACAACCGTTGCC+TGG | 0.486748 | 3_3:+9422536 | None:intergenic |
| AATGGCCATATATCTAATGT+TGG | 0.489549 | 3_3:-9426389 | Msa0441130:CDS |
| CTACAACAACTCAAGATTCG+AGG | 0.494217 | 3_3:-9429708 | Msa0441130:intron |
| TGAATTTCCAGTAGCACCAC+TGG | 0.503475 | 3_3:+9426426 | None:intergenic |
| ATGGCCATATATCTAATGTT+GGG | 0.506294 | 3_3:-9426388 | Msa0441130:CDS |
| TGATAGTTGGCAATAGCCTT+GGG | 0.519273 | 3_3:+9426683 | None:intergenic |
| CTTAAACTTAAACAGTGAAA+CGG | 0.520932 | 3_3:-9424236 | Msa0441130:intron |
| GCCTTGGGAATTTCTTCCAA+CGG | 0.523993 | 3_3:+9426698 | None:intergenic |
| ACTATAGGTTGTTGGTGATG+TGG | 0.525653 | 3_3:-9422712 | Msa0441130:intron |
| GTGGTTCTTCAACTTCATGC+TGG | 0.529637 | 3_3:-9422693 | Msa0441130:CDS |
| ATCGATGCTGCAACAAAGCA+TGG | 0.530276 | 3_3:-9426469 | Msa0441130:CDS |
| AACCTTGAATCCGGACACTT+AGG | 0.536199 | 3_3:-9423036 | Msa0441130:CDS |
| GCAGAATCATCCATCTATCA+AGG | 0.542084 | 3_3:-9428612 | Msa0441130:intron |
| GGCTAGGAACCGATGTTGCA+TGG | 0.544266 | 3_3:-9423011 | Msa0441130:CDS |
| ACTAACTCAATTCCTGTCAA+AGG | 0.547459 | 3_3:+9422666 | None:intergenic |
| AGGAACCGATGTTGCATGGA+CGG | 0.557674 | 3_3:-9423007 | Msa0441130:CDS |
| TTATAATGCAGTATGGTGTT+GGG | 0.558492 | 3_3:-9426595 | Msa0441130:CDS |
| ACAGCCTCATAGTCTAAAAG+AGG | 0.560341 | 3_3:+9423066 | None:intergenic |
| CTCCTATAGATCCATGGCTA+AGG | 0.568330 | 3_3:-9422905 | Msa0441130:intron |
| CTTGAATCCGGACACTTAGG+AGG | 0.570448 | 3_3:-9423033 | Msa0441130:CDS |
| ACATTGGAATTGATTTAGCA+CGG | 0.573732 | 3_3:-9424522 | Msa0441130:CDS |
| CCAAATAAAGTATCACCGAT+AGG | 0.575385 | 3_3:+9425550 | None:intergenic |
| AATGCAGTATGGTGTTGGGC+TGG | 0.576747 | 3_3:-9426591 | Msa0441130:CDS |
| CAGTATGGTGTTGGGCTGGA+AGG | 0.577929 | 3_3:-9426587 | Msa0441130:intron |
| GAATTTCCAGTAGCACCACT+GGG | 0.581979 | 3_3:+9426427 | None:intergenic |
| TCCGGACACTTAGGAGGGCT+AGG | 0.583295 | 3_3:-9423027 | Msa0441130:CDS |
| GTAGGTTGATGTTCTCCCGT+TGG | 0.587056 | 3_3:-9426714 | Msa0441130:intron |
| CACAAACTCAAATTGAGATG+AGG | 0.591317 | 3_3:-9422425 | Msa0441130:three_prime_UTR |
| CTTCTGGTTAATGTTGCTAG+AGG | 0.594373 | 3_3:-9423090 | Msa0441130:CDS |
| CTCTAGCAACATTAACCAGA+AGG | 0.595259 | 3_3:+9423091 | None:intergenic |
| TGCAGATTTCCATACAGCAA+AGG | 0.595617 | 3_3:-9425585 | Msa0441130:CDS |
| GAAGATACTATACTTGCTTG+CGG | 0.595687 | 3_3:+9426359 | None:intergenic |
| AGCCACACAAACCTTAGCCA+TGG | 0.596880 | 3_3:+9422894 | None:intergenic |
| TGATGATCTTGTTGATGTGA+AGG | 0.599066 | 3_3:-9424314 | Msa0441130:CDS |
| AGGAAGCTTGGAGAGCCTAT+CGG | 0.606938 | 3_3:-9425565 | Msa0441130:CDS |
| AGCATGGAATCAAAGTTGCT+AGG | 0.608422 | 3_3:-9426453 | Msa0441130:CDS |
| ATAAAATTGAGACCAGGCAA+CGG | 0.613169 | 3_3:-9422548 | Msa0441130:three_prime_UTR |
| AGAACACTCCTATAGATCCA+TGG | 0.614020 | 3_3:-9422911 | Msa0441130:CDS |
| CCCGTTGGAAGAAATTCCCA+AGG | 0.614180 | 3_3:-9426699 | Msa0441130:CDS |
| GTTGTATATAGATGAGAACA+TGG | 0.621208 | 3_3:+9428644 | None:intergenic |
| TCTGTAACGCCTGCAATATG+AGG | 0.621540 | 3_3:+9422931 | None:intergenic |
| GATGATCTTGTTGATGTGAA+GGG | 0.630775 | 3_3:-9424313 | Msa0441130:CDS |
| TGGCTCCGTCCATGCAACAT+CGG | 0.631902 | 3_3:+9423002 | None:intergenic |
| AAAGTGTGTTGTACTTGTTG+AGG | 0.638382 | 3_3:-9429780 | Msa0441130:CDS |
| AGATGAGAACATGGGAACTG+AGG | 0.641093 | 3_3:+9428653 | None:intergenic |
| TTATTTATAAAATTGAGACC+AGG | 0.655792 | 3_3:-9422554 | Msa0441130:three_prime_UTR |
| TTGAATCCGGACACTTAGGA+GGG | 0.659810 | 3_3:-9423032 | Msa0441130:CDS |
| TCTAGCAACATTAACCAGAA+GGG | 0.669159 | 3_3:+9423092 | None:intergenic |
| TAAAAGTTATTGCTACAAAG+CGG | 0.687855 | 3_3:-9424480 | Msa0441130:CDS |
| TTGTATATAGATGAGAACAT+GGG | 0.718125 | 3_3:+9428645 | None:intergenic |
| AAAGTTGCTAGGATCCCCAG+TGG | 0.758524 | 3_3:-9426442 | Msa0441130:CDS |
| AATTTCCAGTAGCACCACTG+GGG | 0.785993 | 3_3:+9426428 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCATTCAAATATAAAAA+GGG | + | chr3_3:9424404-9424423 | None:intergenic | 10.0% |
| !!! | TAGAAATATAGATTTTATTT+CGG | + | chr3_3:9426900-9426919 | None:intergenic | 10.0% |
| !! | AATGAAATAAGTAAATTTAA+GGG | + | chr3_3:9428323-9428342 | None:intergenic | 10.0% |
| !! | AAATGAAATAAGTAAATTTA+AGG | + | chr3_3:9428324-9428343 | None:intergenic | 10.0% |
| !!! | ATTTACTTATTTCATTTTTT+AGG | - | chr3_3:9428327-9428346 | Msa0441130:intron | 10.0% |
| !!! | TTTACTTATTTCATTTTTTA+GGG | - | chr3_3:9428328-9428347 | Msa0441130:intron | 10.0% |
| !!! | AAGTAAGATAGTAATTATTT+TGG | - | chr3_3:9422430-9422449 | Msa0441130:three_prime_UTR | 15.0% |
| !! | ATTCTAAATTCAATATCATT+AGG | - | chr3_3:9423109-9423128 | Msa0441130:intron | 15.0% |
| !! | ATTCTAAATTCAATGTAATT+AGG | - | chr3_3:9423453-9423472 | Msa0441130:intron | 15.0% |
| !! | GAAAATATCAAAATGAAAAA+AGG | + | chr3_3:9423729-9423748 | None:intergenic | 15.0% |
| !! | ATCAAATTTCTGTTATATTT+AGG | + | chr3_3:9424129-9424148 | None:intergenic | 15.0% |
| !! | TATATTGTCAAAATATGAAT+TGG | + | chr3_3:9424270-9424289 | None:intergenic | 15.0% |
| !!! | CTTTTCATTCAAATATAAAA+AGG | + | chr3_3:9424405-9424424 | None:intergenic | 15.0% |
| !!! | AATTTGAAATGAAGAAAAAT+AGG | + | chr3_3:9424568-9424587 | None:intergenic | 15.0% |
| !! | ATATTTCGTTATATCTAAAT+TGG | - | chr3_3:9424610-9424629 | Msa0441130:intron | 15.0% |
| !! | ATAGATACCAATTTAAATTA+CGG | + | chr3_3:9425373-9425392 | None:intergenic | 15.0% |
| !! | GAAAAATAATAAATAATCAG+AGG | + | chr3_3:9425767-9425786 | None:intergenic | 15.0% |
| !!! | TATTTATTATTTTTCCTCTT+AGG | - | chr3_3:9425772-9425791 | Msa0441130:intron | 15.0% |
| !! | AATATTTGTCAATAAAAATG+TGG | + | chr3_3:9426002-9426021 | None:intergenic | 15.0% |
| !!! | ATATATAGATAGTTTACTTT+TGG | - | chr3_3:9427017-9427036 | Msa0441130:intron | 15.0% |
| !!! | TTTGATACTTTTTTTTATCA+AGG | - | chr3_3:9427242-9427261 | Msa0441130:intron | 15.0% |
| !!! | ATAATGTAGATATTCATTTT+GGG | - | chr3_3:9427718-9427737 | Msa0441130:intron | 15.0% |
| !! | AAAACGAATAAATAAATGAT+TGG | + | chr3_3:9428072-9428091 | None:intergenic | 15.0% |
| !! | ATGAAATAAGTAAATTTAAG+GGG | + | chr3_3:9428322-9428341 | None:intergenic | 15.0% |
| !! | AATAGAAATAGAGAAAATAA+TGG | - | chr3_3:9428477-9428496 | Msa0441130:intron | 15.0% |
| !!! | GATTTTATTTTTTTATCAGT+AGG | - | chr3_3:9428935-9428954 | Msa0441130:intron | 15.0% |
| !!! | TACAAGATATTTTGAGATTA+AGG | - | chr3_3:9422804-9422823 | Msa0441130:intron | 20.0% |
| !! | TATGAAAACAACTTATTAAC+AGG | + | chr3_3:9423211-9423230 | None:intergenic | 20.0% |
| !! | CTAAGCTATAATTTCAATAT+TGG | - | chr3_3:9423509-9423528 | Msa0441130:intron | 20.0% |
| !!! | GTTTTAACTTTTAAATGTCA+TGG | - | chr3_3:9423770-9423789 | Msa0441130:intron | 20.0% |
| !! | ATAAAAACAATAGTGATGAA+TGG | - | chr3_3:9423839-9423858 | Msa0441130:intron | 20.0% |
| !! | AACAAGATTAAAAATGCAAA+AGG | + | chr3_3:9423876-9423895 | None:intergenic | 20.0% |
| !!! | TTTTGCATTTTTAATCTTGT+TGG | - | chr3_3:9423875-9423894 | Msa0441130:intron | 20.0% |
| !!! | TTTGCATTTTTAATCTTGTT+GGG | - | chr3_3:9423876-9423895 | Msa0441130:intron | 20.0% |
| !! | AGTTAAAACAAAAGGAATTA+TGG | - | chr3_3:9424071-9424090 | Msa0441130:intron | 20.0% |
| !! | GTTAAAACAAAAGGAATTAT+GGG | - | chr3_3:9424072-9424091 | Msa0441130:intron | 20.0% |
| !! | TACTTTACTATAAGTCAAAT+AGG | + | chr3_3:9424186-9424205 | None:intergenic | 20.0% |
| !!! | CTTCTTATTTCATAATTCTA+CGG | + | chr3_3:9424221-9424240 | None:intergenic | 20.0% |
| !! | TAGATTGAATTAAGTTTCTT+CGG | - | chr3_3:9424470-9424489 | Msa0441130:CDS | 20.0% |
| !! | TTCAGAGAAACAATTAAAAT+TGG | - | chr3_3:9425121-9425140 | Msa0441130:intron | 20.0% |
| !! | ATTTAAATTGGTATCTATCA+TGG | - | chr3_3:9425375-9425394 | Msa0441130:intron | 20.0% |
| !! | TTTAAATTGGTATCTATCAT+GGG | - | chr3_3:9425376-9425395 | Msa0441130:intron | 20.0% |
| !!! | GTTTCATTCCAATTAATTTT+AGG | - | chr3_3:9425506-9425525 | Msa0441130:intron | 20.0% |
| !! | TTATCTGACCTAAAATTAAT+TGG | + | chr3_3:9425517-9425536 | None:intergenic | 20.0% |
| !!! | AACTACTAGAAACTTTTTAA+AGG | - | chr3_3:9426161-9426180 | Msa0441130:intron | 20.0% |
| !!! | ACTACTAGAAACTTTTTAAA+GGG | - | chr3_3:9426162-9426181 | Msa0441130:intron | 20.0% |
| !!! | TCTATATTTCTACCTTATAA+AGG | - | chr3_3:9426908-9426927 | Msa0441130:intron | 20.0% |
| !!! | GATAATGTAGATATTCATTT+TGG | - | chr3_3:9427717-9427736 | Msa0441130:intron | 20.0% |
| !!! | TAATGTAGATATTCATTTTG+GGG | - | chr3_3:9427719-9427738 | Msa0441130:intron | 20.0% |
| !!! | TTTTCATTACAATTTGCTTT+TGG | - | chr3_3:9428150-9428169 | Msa0441130:intron | 20.0% |
| !! | TAATCAAAGAATAGTTCATA+GGG | + | chr3_3:9428636-9428655 | None:intergenic | 20.0% |
| !! | ATAATCAAAGAATAGTTCAT+AGG | + | chr3_3:9428637-9428656 | None:intergenic | 20.0% |
| !!! | ATTTTAATTTCGTAGAGAAT+AGG | + | chr3_3:9428716-9428735 | None:intergenic | 20.0% |
| !! | AAATTAAAATTAGTAGCCTA+AGG | - | chr3_3:9428726-9428745 | Msa0441130:CDS | 20.0% |
| !! | ACATAGAAATAATGTATAAC+TGG | - | chr3_3:9428885-9428904 | Msa0441130:intron | 20.0% |
| !! | AATAATGTATAACTGGAATT+TGG | - | chr3_3:9428892-9428911 | Msa0441130:intron | 20.0% |
| !!! | CATTTCTTGTTGTTTTATAT+AGG | - | chr3_3:9429043-9429062 | Msa0441130:intron | 20.0% |
| !! | AATTTCAATATCTGATCATT+GGG | + | chr3_3:9429301-9429320 | None:intergenic | 20.0% |
| !! | AAATTTCAATATCTGATCAT+TGG | + | chr3_3:9429302-9429321 | None:intergenic | 20.0% |
| !!! | ATAAACTATCAAAAAAGTAC+AGG | + | chr3_3:9429663-9429682 | None:intergenic | 20.0% |
| !!! | TAGTTTATGATCATTTTCAA+TGG | - | chr3_3:9429675-9429694 | Msa0441130:intron | 20.0% |
| !! | TTATTTATAAAATTGAGACC+AGG | - | chr3_3:9429717-9429736 | Msa0441130:CDS | 20.0% |
| !! | TTTTCGTTGAAACAAAGATT+TGG | + | chr3_3:9422521-9422540 | None:intergenic | 25.0% |
| ! | AAAAAATCTAAAAGCCTCAT+TGG | + | chr3_3:9422692-9422711 | None:intergenic | 25.0% |
| !! | CATTGAATTTAGAATCTAGT+GGG | + | chr3_3:9423448-9423467 | None:intergenic | 25.0% |
| !! | ACATTGAATTTAGAATCTAG+TGG | + | chr3_3:9423449-9423468 | None:intergenic | 25.0% |
| ! | TTGTATATAGATGAGAACAT+GGG | + | chr3_3:9423629-9423648 | None:intergenic | 25.0% |
| ! | TGATTAATGAGCTTCAATTT+AGG | - | chr3_3:9423943-9423962 | Msa0441130:intron | 25.0% |
| !!! | TTCCTTTTGTTTTAACTCTT+CGG | + | chr3_3:9424068-9424087 | None:intergenic | 25.0% |
| ! | GAAATAACCTAAAAACTAAG+AGG | + | chr3_3:9424103-9424122 | None:intergenic | 25.0% |
| !!! | ACATAGTTTGTTATGTTAAG+TGG | - | chr3_3:9424157-9424176 | Msa0441130:intron | 25.0% |
| ! | CGTAGAATTATGAAATAAGA+AGG | - | chr3_3:9424219-9424238 | Msa0441130:intron | 25.0% |
| !! | TAAATTGGTGTTCTATCATT+TGG | - | chr3_3:9424625-9424644 | Msa0441130:intron | 25.0% |
| !! | AAATTGGTGTTCTATCATTT+GGG | - | chr3_3:9424626-9424645 | Msa0441130:intron | 25.0% |
| ! | TTCTGTAAGAAACTATGTTA+AGG | - | chr3_3:9424695-9424714 | Msa0441130:intron | 25.0% |
| ! | TCTGTAAGAAACTATGTTAA+GGG | - | chr3_3:9424696-9424715 | Msa0441130:intron | 25.0% |
| ! | TAATGTACAATTAAACTGCT+TGG | - | chr3_3:9424873-9424892 | Msa0441130:intron | 25.0% |
| !! | ACAATTAAAATTGGTGATCT+TGG | - | chr3_3:9425130-9425149 | Msa0441130:intron | 25.0% |
| !! | CAATTAAAATTGGTGATCTT+GGG | - | chr3_3:9425131-9425150 | Msa0441130:intron | 25.0% |
| ! | TTTCAGTAGTAGTTATCTTT+AGG | - | chr3_3:9425262-9425281 | Msa0441130:intron | 25.0% |
| ! | CCAATTTAAATTACGGAAAT+AGG | + | chr3_3:9425366-9425385 | None:intergenic | 25.0% |
| ! | CCTATTTCCGTAATTTAAAT+TGG | - | chr3_3:9425363-9425382 | Msa0441130:intron | 25.0% |
| ! | TTAAATTGGTATCTATCATG+GGG | - | chr3_3:9425377-9425396 | Msa0441130:intron | 25.0% |
| ! | GCAATCTCATTTAGAAATAA+TGG | + | chr3_3:9425958-9425977 | None:intergenic | 25.0% |
| ! | TTGACAAATATTTGAAAGCA+AGG | - | chr3_3:9426010-9426029 | Msa0441130:intron | 25.0% |
| ! | TGACAAATATTTGAAAGCAA+GGG | - | chr3_3:9426011-9426030 | Msa0441130:intron | 25.0% |
| !!! | CTACTAGAAACTTTTTAAAG+GGG | - | chr3_3:9426163-9426182 | Msa0441130:intron | 25.0% |
| ! | TGTTATTGTTTAATATGCCA+TGG | - | chr3_3:9426798-9426817 | Msa0441130:intron | 25.0% |
| ! | GTTATTGTTTAATATGCCAT+GGG | - | chr3_3:9426799-9426818 | Msa0441130:intron | 25.0% |
| !! | GTTGCATACATTGATTAAAA+TGG | - | chr3_3:9426858-9426877 | Msa0441130:intron | 25.0% |
| !!! | ATCCAGGCAATAATTTTTTT+AGG | - | chr3_3:9426950-9426969 | Msa0441130:intron | 25.0% |
| !!! | TAATTTTTTTAGGTGTCTGA+TGG | - | chr3_3:9426960-9426979 | Msa0441130:intron | 25.0% |
| !! | TTCAATCAATTTTCACGAAA+CGG | + | chr3_3:9427049-9427068 | None:intergenic | 25.0% |
| ! | TCGTGAAAATTGATTGAATT+AGG | - | chr3_3:9427051-9427070 | Msa0441130:intron | 25.0% |
| ! | ATCTCTAATAACAAGCAATT+AGG | - | chr3_3:9427294-9427313 | Msa0441130:intron | 25.0% |
| ! | TCTCTAATAACAAGCAATTA+GGG | - | chr3_3:9427295-9427314 | Msa0441130:intron | 25.0% |
| ! | ATCTTTAACGATTGTTTCAA+CGG | + | chr3_3:9427594-9427613 | None:intergenic | 25.0% |
| ! | ATTTGCAAAAACTAAAACAG+TGG | - | chr3_3:9427675-9427694 | Msa0441130:intron | 25.0% |
| ! | TAAAAGTTATTGCTACAAAG+CGG | - | chr3_3:9427791-9427810 | Msa0441130:intron | 25.0% |
| ! | CTTAAACTTAAACAGTGAAA+CGG | - | chr3_3:9428035-9428054 | Msa0441130:intron | 25.0% |
| ! | TAAATTTAAGGGGTTAATCT+TGG | + | chr3_3:9428312-9428331 | None:intergenic | 25.0% |
| ! | TCATTAAGTAAACATAACCA+CGG | + | chr3_3:9428583-9428602 | None:intergenic | 25.0% |
| !! | ATAGACTTTTGATCAAGATA+AGG | - | chr3_3:9428842-9428861 | Msa0441130:intron | 25.0% |
| !! | TAGACTTTTGATCAAGATAA+GGG | - | chr3_3:9428843-9428862 | Msa0441130:intron | 25.0% |
| !!! | TTGTTTTATATAGGCTAGAT+TGG | - | chr3_3:9429052-9429071 | Msa0441130:intron | 25.0% |
| !! | TGTTTTATATAGGCTAGATT+GGG | - | chr3_3:9429053-9429072 | Msa0441130:intron | 25.0% |
| !! | TTACGAATTCCTTTATTTCA+GGG | - | chr3_3:9429154-9429173 | Msa0441130:intron | 25.0% |
| ! | TTTACAGATCCATATAATTC+TGG | + | chr3_3:9429422-9429441 | None:intergenic | 25.0% |
| ! | ATTGAGTTAGTCAATTGAAT+TGG | - | chr3_3:9429617-9429636 | Msa0441130:intron | 25.0% |
| ! | CAAACATCATTCATCTTATT+TGG | + | chr3_3:9429790-9429809 | None:intergenic | 25.0% |
| ! | AGTAAACTGAGATAAATAAC+AGG | + | chr3_3:9429824-9429843 | None:intergenic | 25.0% |
| !!! | TTCACTCTGTTTTGTTTGAA+TGG | - | chr3_3:9422654-9422673 | Msa0441130:exon | 30.0% |
| ATAAGCTGTTTACCAAAACA+GGG | + | chr3_3:9422830-9422849 | None:intergenic | 30.0% | |
| AATAAGCTGTTTACCAAAAC+AGG | + | chr3_3:9422831-9422850 | None:intergenic | 30.0% | |
| GTGAAATACAAGATACTCAT+TGG | + | chr3_3:9423159-9423178 | None:intergenic | 30.0% | |
| TCTCAAACTATCTTGTGATT+AGG | + | chr3_3:9423181-9423200 | None:intergenic | 30.0% | |
| ! | TCACAAGATAGTTTGAGATT+AGG | - | chr3_3:9423183-9423202 | Msa0441130:intron | 30.0% |
| ! | CACAAGATAGTTTGAGATTA+GGG | - | chr3_3:9423184-9423203 | Msa0441130:intron | 30.0% |
| !! | GTTGTTTTCATAAGCTATCT+TGG | - | chr3_3:9423219-9423238 | Msa0441130:intron | 30.0% |
| ATAAGTTGTATGAGATCGTT+TGG | + | chr3_3:9423311-9423330 | None:intergenic | 30.0% | |
| AAAAATCTGATGGAGAGAAA+TGG | - | chr3_3:9423543-9423562 | Msa0441130:intron | 30.0% | |
| AAAATCTGATGGAGAGAAAT+GGG | - | chr3_3:9423544-9423563 | Msa0441130:intron | 30.0% | |
| GTTGTATATAGATGAGAACA+TGG | + | chr3_3:9423630-9423649 | None:intergenic | 30.0% | |
| TATCAAGGTACATCTCTATT+AGG | - | chr3_3:9423674-9423693 | Msa0441130:intron | 30.0% | |
| ATCAAGGTACATCTCTATTA+GGG | - | chr3_3:9423675-9423694 | Msa0441130:intron | 30.0% | |
| AACCGAAGAGTTAAAACAAA+AGG | - | chr3_3:9424063-9424082 | Msa0441130:intron | 30.0% | |
| ATTTCATAATTCTACGGTGT+GGG | + | chr3_3:9424215-9424234 | None:intergenic | 30.0% | |
| TATTTCATAATTCTACGGTG+TGG | + | chr3_3:9424216-9424235 | None:intergenic | 30.0% | |
| CAAATTGAATAGTACAGTCA+CGG | + | chr3_3:9424436-9424455 | None:intergenic | 30.0% | |
| TTAAAGGAAGGGAATTTAAG+TGG | - | chr3_3:9424663-9424682 | Msa0441130:intron | 30.0% | |
| ! | AAATTTAACGTCTGGTTTGA+AGG | - | chr3_3:9425005-9425024 | Msa0441130:intron | 30.0% |
| TTGATTGTTTCCTATGTTGT+TGG | + | chr3_3:9425240-9425259 | None:intergenic | 30.0% | |
| !! | TATCTTTAGGACGTAATAAG+TGG | - | chr3_3:9425275-9425294 | Msa0441130:intron | 30.0% |
| TACTACACAAACATGATAGT+TGG | + | chr3_3:9425604-9425623 | None:intergenic | 30.0% | |
| ATGAAGCTTATAATGCAGTA+TGG | - | chr3_3:9425669-9425688 | Msa0441130:intron | 30.0% | |
| TTATAATGCAGTATGGTGTT+GGG | - | chr3_3:9425676-9425695 | Msa0441130:intron | 30.0% | |
| AATGGCCATATATCTAATGT+TGG | - | chr3_3:9425882-9425901 | Msa0441130:intron | 30.0% | |
| ATGGCCATATATCTAATGTT+GGG | - | chr3_3:9425883-9425902 | Msa0441130:intron | 30.0% | |
| AAGACCCAACATTAGATATA+TGG | + | chr3_3:9425890-9425909 | None:intergenic | 30.0% | |
| GACAAATATTTGAAAGCAAG+GGG | - | chr3_3:9426012-9426031 | Msa0441130:intron | 30.0% | |
| ACAAATATTTGAAAGCAAGG+GGG | - | chr3_3:9426013-9426032 | Msa0441130:intron | 30.0% | |
| GACATGTTAGATAATGTTAG+AGG | + | chr3_3:9426362-9426381 | None:intergenic | 30.0% | |
| ! | CTATCGGTGATACTTTATTT+GGG | - | chr3_3:9426722-9426741 | Msa0441130:intron | 30.0% |
| CACCTAAAAAAATTATTGCC+TGG | + | chr3_3:9426955-9426974 | None:intergenic | 30.0% | |
| ! | TCAATCAATTTTCACGAAAC+GGG | + | chr3_3:9427048-9427067 | None:intergenic | 30.0% |
| !! | TTAACATGTAACTTGTTCCT+AGG | - | chr3_3:9427194-9427213 | Msa0441130:intron | 30.0% |
| AAAATTAAAGCAATGCTCAG+AGG | + | chr3_3:9427225-9427244 | None:intergenic | 30.0% | |
| ! | CGATACAATTATGGTTAGTT+GGG | - | chr3_3:9427339-9427358 | Msa0441130:intron | 30.0% |
| GAGTCAAACAAAACATTTGA+AGG | - | chr3_3:9427375-9427394 | Msa0441130:intron | 30.0% | |
| TCTTAGTTACTGAATCAACT+AGG | + | chr3_3:9427509-9427528 | None:intergenic | 30.0% | |
| ! | GTTGATTCAGTAACTAAGAT+CGG | - | chr3_3:9427510-9427529 | Msa0441130:intron | 30.0% |
| !!! | TAGATATTCATTTTGGGGTT+CGG | - | chr3_3:9427724-9427743 | Msa0441130:intron | 30.0% |
| ! | ACATTGGAATTGATTTAGCA+CGG | - | chr3_3:9427749-9427768 | Msa0441130:intron | 30.0% |
| ! | GCAATAACTTTTACACCAAA+TGG | + | chr3_3:9427784-9427803 | None:intergenic | 30.0% |
| CTTCATTTCTTCCATGAAAA+AGG | - | chr3_3:9428276-9428295 | Msa0441130:intron | 30.0% | |
| TAAGCTCATAATGTATGTAC+AGG | - | chr3_3:9428355-9428374 | Msa0441130:intron | 30.0% | |
| TAATGTATGTACAGGATGAT+AGG | - | chr3_3:9428363-9428382 | Msa0441130:intron | 30.0% | |
| TTTGTTCCTAAAACACAGAA+TGG | + | chr3_3:9428458-9428477 | None:intergenic | 30.0% | |
| TTTAACTGAAGAATGAGTTG+TGG | - | chr3_3:9428513-9428532 | Msa0441130:intron | 30.0% | |
| TGTATGAGTGCTTAAAACTA+CGG | + | chr3_3:9428977-9428996 | None:intergenic | 30.0% | |
| ! | GTTTTATATAGGCTAGATTG+GGG | - | chr3_3:9429054-9429073 | Msa0441130:intron | 30.0% |
| ! | TTTTATATAGGCTAGATTGG+GGG | - | chr3_3:9429055-9429074 | Msa0441130:intron | 30.0% |
| ! | GTTACGAATTCCTTTATTTC+AGG | - | chr3_3:9429153-9429172 | Msa0441130:intron | 30.0% |
| !! | CCATATAATTCTGGAATAAG+TGG | + | chr3_3:9429413-9429432 | None:intergenic | 30.0% |
| CCACTTATTCCAGAATTATA+TGG | - | chr3_3:9429410-9429429 | Msa0441130:intron | 30.0% | |
| !! | ACAAAAGCACTTTAAGCATA+GGG | + | chr3_3:9429461-9429480 | None:intergenic | 30.0% |
| !! | TACAAAAGCACTTTAAGCAT+AGG | + | chr3_3:9429462-9429481 | None:intergenic | 30.0% |
| ACAACCTATAGTAAAACAAC+AGG | + | chr3_3:9429551-9429570 | None:intergenic | 30.0% | |
| !! | GTTGTTTTACTATAGGTTGT+TGG | - | chr3_3:9429551-9429570 | Msa0441130:intron | 30.0% |
| ! | AAAGTGTGTTGTACTTGTTG+AGG | - | chr3_3:9422491-9422510 | Msa0441130:three_prime_UTR | 35.0% |
| GCAGAATACAATATGCTCAT+TGG | + | chr3_3:9422779-9422798 | None:intergenic | 35.0% | |
| ! | TAAGCTTTGTGAGACTGTTT+GGG | + | chr3_3:9423029-9423048 | None:intergenic | 35.0% |
| ! | ATAAGCTTTGTGAGACTGTT+TGG | + | chr3_3:9423030-9423049 | None:intergenic | 35.0% |
| CCAATAAGAAACCATCAATC+TGG | + | chr3_3:9423388-9423407 | None:intergenic | 35.0% | |
| ! | CCAGATTGATGGTTTCTTAT+TGG | - | chr3_3:9423385-9423404 | Msa0441130:intron | 35.0% |
| !! | TTTCAATATTGGTGCTGTGT+AGG | - | chr3_3:9423520-9423539 | Msa0441130:intron | 35.0% |
| TAGAGATGTACCTTGATAGA+TGG | + | chr3_3:9423672-9423691 | None:intergenic | 35.0% | |
| CAATTTAGGCTGAATCGATT+CGG | - | chr3_3:9423957-9423976 | Msa0441130:intron | 35.0% | |
| GAATACCCAAATTTGATTCC+TGG | - | chr3_3:9423979-9423998 | Msa0441130:intron | 35.0% | |
| ! | TAATCTGAAATTCGGCTAGA+AGG | + | chr3_3:9424030-9424049 | None:intergenic | 35.0% |
| !! | TTTTAACTCTTCGGTTCACA+GGG | + | chr3_3:9424059-9424078 | None:intergenic | 35.0% |
| !! | GGATCATCCTCTTAGTTTTT+AGG | - | chr3_3:9424093-9424112 | Msa0441130:intron | 35.0% |
| TTTCATAATTCTACGGTGTG+GGG | + | chr3_3:9424214-9424233 | None:intergenic | 35.0% | |
| AATATGAATTGGATTGCCTC+TGG | + | chr3_3:9424259-9424278 | None:intergenic | 35.0% | |
| AAAAGCCTCTTGTGTAAAAC+AGG | - | chr3_3:9424298-9424317 | Msa0441130:CDS | 35.0% | |
| AAAGCCTCTTGTGTAAAACA+GGG | - | chr3_3:9424299-9424318 | Msa0441130:CDS | 35.0% | |
| CGTACAATACACCAAATGAT+GGG | - | chr3_3:9424330-9424349 | Msa0441130:intron | 35.0% | |
| CAAATATAAAAAGGGCAACC+CGG | + | chr3_3:9424396-9424415 | None:intergenic | 35.0% | |
| CGTGACTGTACTATTCAATT+TGG | - | chr3_3:9424434-9424453 | Msa0441130:intron | 35.0% | |
| TCCTTTGAACTGCTTTATGA+CGG | - | chr3_3:9424498-9424517 | Msa0441130:CDS | 35.0% | |
| ! | TATCATTTGGGTTAACTTCC+TGG | - | chr3_3:9424638-9424657 | Msa0441130:intron | 35.0% |
| GGTTAACTTCCTGGATTTAA+AGG | - | chr3_3:9424647-9424666 | Msa0441130:intron | 35.0% | |
| AACTTCCTGGATTTAAAGGA+AGG | - | chr3_3:9424651-9424670 | Msa0441130:intron | 35.0% | |
| ACTTCCTGGATTTAAAGGAA+GGG | - | chr3_3:9424652-9424671 | Msa0441130:intron | 35.0% | |
| AATTCCCTTCCTTTAAATCC+AGG | + | chr3_3:9424659-9424678 | None:intergenic | 35.0% | |
| !! | GTTAAGGGTATCCAATCTAA+TGG | - | chr3_3:9424711-9424730 | Msa0441130:intron | 35.0% |
| ATCCAATCTAATGGAGTTGT+TGG | - | chr3_3:9424720-9424739 | Msa0441130:intron | 35.0% | |
| TTGTTGGAGAAGAATGTTGA+AGG | - | chr3_3:9424736-9424755 | Msa0441130:intron | 35.0% | |
| TGTTGGAGAAGAATGTTGAA+GGG | - | chr3_3:9424737-9424756 | Msa0441130:intron | 35.0% | |
| CTTGGTCAAAGATAAACAGA+CGG | - | chr3_3:9424838-9424857 | Msa0441130:intron | 35.0% | |
| TTGGTCAAAGATAAACAGAC+GGG | - | chr3_3:9424839-9424858 | Msa0441130:intron | 35.0% | |
| CAGAATGACAGTTAAGAAAC+AGG | - | chr3_3:9424943-9424962 | Msa0441130:intron | 35.0% | |
| CGTTAAATTTCTTGCACAAC+AGG | + | chr3_3:9424995-9425014 | None:intergenic | 35.0% | |
| TGTGCAAGAAATTTAACGTC+TGG | - | chr3_3:9424997-9425016 | Msa0441130:intron | 35.0% | |
| TCGGTTCTTGATACGTTAAA+TGG | + | chr3_3:9425037-9425056 | None:intergenic | 35.0% | |
| TTTAACGTATCAAGAACCGA+TGG | - | chr3_3:9425037-9425056 | Msa0441130:intron | 35.0% | |
| AAAAGCAATGGCATATGCTT+TGG | - | chr3_3:9425065-9425084 | Msa0441130:intron | 35.0% | |
| AAAGCAATGGCATATGCTTT+GGG | - | chr3_3:9425066-9425085 | Msa0441130:intron | 35.0% | |
| TTCTCTGAACATTGATGTGA+GGG | + | chr3_3:9425110-9425129 | None:intergenic | 35.0% | |
| TTTCTCTGAACATTGATGTG+AGG | + | chr3_3:9425111-9425130 | None:intergenic | 35.0% | |
| ! | TTAAAATTGGTGATCTTGGG+TGG | - | chr3_3:9425134-9425153 | Msa0441130:intron | 35.0% |
| CACAGAAGTAAATGAAGAGA+GGG | - | chr3_3:9425160-9425179 | Msa0441130:intron | 35.0% | |
| AAATGAAGAGAGGGTAATAG+TGG | - | chr3_3:9425169-9425188 | Msa0441130:intron | 35.0% | |
| TTCTTATGTGCAGGAAATGA+TGG | - | chr3_3:9425208-9425227 | Msa0441130:intron | 35.0% | |
| AAGTGTAATACGAAAGTGGT+AGG | + | chr3_3:9425479-9425498 | None:intergenic | 35.0% | |
| TACCACTTTCGTATTACACT+TGG | - | chr3_3:9425478-9425497 | Msa0441130:intron | 35.0% | |
| TTCCAAGTGTAATACGAAAG+TGG | + | chr3_3:9425483-9425502 | None:intergenic | 35.0% | |
| AAGCTGTCTATTGCATTTGT+AGG | - | chr3_3:9425539-9425558 | Msa0441130:intron | 35.0% | |
| CTTATAATGCAGTATGGTGT+TGG | - | chr3_3:9425675-9425694 | Msa0441130:intron | 35.0% | |
| GAAGATACTATACTTGCTTG+CGG | + | chr3_3:9425915-9425934 | None:intergenic | 35.0% | |
| TGAGAAGAAAATACTTAGCC+TGG | - | chr3_3:9426043-9426062 | Msa0441130:intron | 35.0% | |
| ACACATTCTTATACATCACC+AGG | + | chr3_3:9426064-9426083 | None:intergenic | 35.0% | |
| !!! | TGGTTTTGTCATGCAGATTT+TGG | + | chr3_3:9426202-9426221 | None:intergenic | 35.0% |
| AAAATCTGCATGACAAAACC+AGG | - | chr3_3:9426201-9426220 | Msa0441130:intron | 35.0% | |
| ! | TTTGATTTATTCAGTGCTCC+TGG | + | chr3_3:9426222-9426241 | None:intergenic | 35.0% |
| !! | GAAACCATGTGCAGTTTTAA+AGG | - | chr3_3:9426268-9426287 | Msa0441130:intron | 35.0% |
| GTGGTTACCAGAAAATTGTA+TGG | + | chr3_3:9426311-9426330 | None:intergenic | 35.0% | |
| ATCTAACATGTCCTCATGTT+TGG | - | chr3_3:9426370-9426389 | Msa0441130:intron | 35.0% | |
| TCTAACATGTCCTCATGTTT+GGG | - | chr3_3:9426371-9426390 | Msa0441130:intron | 35.0% | |
| AGCTTATGCCAAAGCAATTA+TGG | + | chr3_3:9426407-9426426 | None:intergenic | 35.0% | |
| TAATTGCTTTGGCATAAGCT+TGG | - | chr3_3:9426407-9426426 | Msa0441130:CDS | 35.0% | |
| AATTGCTTTGGCATAAGCTT+GGG | - | chr3_3:9426408-9426427 | Msa0441130:CDS | 35.0% | |
| ! | CCAAATAAAGTATCACCGAT+AGG | + | chr3_3:9426724-9426743 | None:intergenic | 35.0% |
| CCTATCGGTGATACTTTATT+TGG | - | chr3_3:9426721-9426740 | Msa0441130:intron | 35.0% | |
| TGTACTATTCATGTGCTTCT+AGG | - | chr3_3:9427121-9427140 | Msa0441130:intron | 35.0% | |
| GCGATACAATTATGGTTAGT+TGG | - | chr3_3:9427338-9427357 | Msa0441130:intron | 35.0% | |
| ! | TGGTTAGTTGGGTTGTAAAT+AGG | - | chr3_3:9427350-9427369 | Msa0441130:intron | 35.0% |
| ! | TTGAAGGTATGATTGTGACT+TGG | - | chr3_3:9427391-9427410 | Msa0441130:intron | 35.0% |
| !!! | AGATATTCATTTTGGGGTTC+GGG | - | chr3_3:9427725-9427744 | Msa0441130:intron | 35.0% |
| TGATGATCTTGTTGATGTGA+AGG | - | chr3_3:9427957-9427976 | Msa0441130:intron | 35.0% | |
| GATGATCTTGTTGATGTGAA+GGG | - | chr3_3:9427958-9427977 | Msa0441130:intron | 35.0% | |
| AAGTAACAGAAGTAGAAGCT+TGG | + | chr3_3:9428105-9428124 | None:intergenic | 35.0% | |
| ! | TACTTCTGTTACTTCTAGCT+AGG | - | chr3_3:9428111-9428130 | Msa0441130:intron | 35.0% |
| ATAAACTAAGCCTAGTATGC+TGG | - | chr3_3:9428186-9428205 | Msa0441130:intron | 35.0% | |
| ! | CTTGGATATGATGTCTTTTC+AGG | - | chr3_3:9428234-9428253 | Msa0441130:intron | 35.0% |
| !! | GATGGTACAAACCTTTTTCA+TGG | + | chr3_3:9428290-9428309 | None:intergenic | 35.0% |
| TTTAAGGGGTTAATCTTGGA+TGG | + | chr3_3:9428308-9428327 | None:intergenic | 35.0% | |
| GTGTCTCTGTCTTTATTCTT+TGG | - | chr3_3:9428390-9428409 | Msa0441130:intron | 35.0% | |
| ATGATAAAAATCTGTCCTCC+TGG | - | chr3_3:9428537-9428556 | Msa0441130:intron | 35.0% | |
| TGATAAAAATCTGTCCTCCT+GGG | - | chr3_3:9428538-9428557 | Msa0441130:intron | 35.0% | |
| GTATGAGTGCTTAAAACTAC+GGG | + | chr3_3:9428976-9428995 | None:intergenic | 35.0% | |
| TCTAGCAACATTAACCAGAA+GGG | + | chr3_3:9429182-9429201 | None:intergenic | 35.0% | |
| ATCTGATCATTGGGATCAAA+TGG | + | chr3_3:9429292-9429311 | None:intergenic | 35.0% | |
| !!! | CTTGCCTGTTGTTTTACTAT+AGG | - | chr3_3:9429544-9429563 | Msa0441130:intron | 35.0% |
| ACTAACTCAATTCCTGTCAA+AGG | + | chr3_3:9429608-9429627 | None:intergenic | 35.0% | |
| ATAAAATTGAGACCAGGCAA+CGG | - | chr3_3:9429723-9429742 | Msa0441130:CDS | 35.0% | |
| AGAGAAGAGAAGTGAGTGTT+GGG | + | chr3_3:9422545-9422564 | None:intergenic | 40.0% | |
| TAGAGAAGAGAAGTGAGTGT+TGG | + | chr3_3:9422546-9422565 | None:intergenic | 40.0% | |
| CTACAACAACTCAAGATTCG+AGG | - | chr3_3:9422563-9422582 | Msa0441130:three_prime_UTR | 40.0% | |
| GGATGAAGATGAAACCAATG+AGG | - | chr3_3:9422675-9422694 | Msa0441130:CDS | 40.0% | |
| ! | TTGAGATTAAGGCCCTGTTT+TGG | - | chr3_3:9422815-9422834 | Msa0441130:intron | 40.0% |
| TCTGTCATGTCATACGACTA+GGG | + | chr3_3:9423090-9423109 | None:intergenic | 40.0% | |
| ATCTGTCATGTCATACGACT+AGG | + | chr3_3:9423091-9423110 | None:intergenic | 40.0% | |
| TCATACAACTAAGGCCTGTT+TGG | + | chr3_3:9423361-9423380 | None:intergenic | 40.0% | |
| TCTGGCATGTCATACAACTA+AGG | + | chr3_3:9423370-9423389 | None:intergenic | 40.0% | |
| TGTATGACATGCCAGATTGA+TGG | - | chr3_3:9423374-9423393 | Msa0441130:intron | 40.0% | |
| GCTGTGTAGGAAAAATCTGA+TGG | - | chr3_3:9423533-9423552 | Msa0441130:intron | 40.0% | |
| !!! | ACGACTCGTGTTTTGTTTTG+TGG | - | chr3_3:9423594-9423613 | Msa0441130:intron | 40.0% |
| GCAGAATCATCCATCTATCA+AGG | - | chr3_3:9423659-9423678 | Msa0441130:intron | 40.0% | |
| TCCAGCCAGGAATCAAATTT+GGG | + | chr3_3:9423987-9424006 | None:intergenic | 40.0% | |
| TTCCAGCCAGGAATCAAATT+TGG | + | chr3_3:9423988-9424007 | None:intergenic | 40.0% | |
| AGCCGAATTTCAGATTACCA+AGG | - | chr3_3:9424033-9424052 | Msa0441130:intron | 40.0% | |
| ! | GGCCTTGGTAATCTGAAATT+CGG | + | chr3_3:9424038-9424057 | None:intergenic | 40.0% |
| !!! | GTTTTAACTCTTCGGTTCAC+AGG | + | chr3_3:9424060-9424079 | None:intergenic | 40.0% |
| !!! | GGATGTGTTTTTTGATCCAG+AGG | - | chr3_3:9424240-9424259 | Msa0441130:CDS | 40.0% |
| ! | CTTACCCTGTTTTACACAAG+AGG | + | chr3_3:9424306-9424325 | None:intergenic | 40.0% |
| CTCTTGTGTAAAACAGGGTA+AGG | - | chr3_3:9424304-9424323 | Msa0441130:CDS | 40.0% | |
| GCGTACAATACACCAAATGA+TGG | - | chr3_3:9424329-9424348 | Msa0441130:intron | 40.0% | |
| ATAGTACAGTCACGGAACTT+TGG | + | chr3_3:9424428-9424447 | None:intergenic | 40.0% | |
| TCCGTCATAAAGCAGTTCAA+AGG | + | chr3_3:9424502-9424521 | None:intergenic | 40.0% | |
| AGTTCCAGTGATTGTCAGAT+TGG | + | chr3_3:9424532-9424551 | None:intergenic | 40.0% | |
| AATCTGACAATCACTGGAAC+TGG | - | chr3_3:9424531-9424550 | Msa0441130:CDS | 40.0% | |
| AGTTTCTTACAGAATACCGC+TGG | + | chr3_3:9424689-9424708 | None:intergenic | 40.0% | |
| CTCCAACAACTCCATTAGAT+TGG | + | chr3_3:9424725-9424744 | None:intergenic | 40.0% | |
| ! | ATGAGTAGTGGAATGAATGG+AGG | - | chr3_3:9424777-9424796 | Msa0441130:intron | 40.0% |
| ! | CACTAATAGTCGCTCTGAAT+TGG | + | chr3_3:9424803-9424822 | None:intergenic | 40.0% |
| GTGAAGATGCAAAAACTGCT+TGG | - | chr3_3:9424820-9424839 | Msa0441130:intron | 40.0% | |
| ! | AGGAGTTACCAGCTTTTGAT+GGG | - | chr3_3:9424963-9424982 | Msa0441130:intron | 40.0% |
| GCACAGAAGTAAATGAAGAG+AGG | - | chr3_3:9425159-9425178 | Msa0441130:intron | 40.0% | |
| AGAGAGGGTAATAGTGGTTA+TGG | - | chr3_3:9425175-9425194 | Msa0441130:intron | 40.0% | |
| ATGGAATCAGCCAACAACAT+AGG | - | chr3_3:9425227-9425246 | Msa0441130:intron | 40.0% | |
| TGATAGTTGGCAATAGCCTT+GGG | + | chr3_3:9425591-9425610 | None:intergenic | 40.0% | |
| ATGATAGTTGGCAATAGCCT+TGG | + | chr3_3:9425592-9425611 | None:intergenic | 40.0% | |
| AGCTCGACTGACAATAATCA+CGG | + | chr3_3:9425712-9425731 | None:intergenic | 40.0% | |
| !! | TGTCAGTCGAGCTTTATTGA+TGG | - | chr3_3:9425719-9425738 | Msa0441130:intron | 40.0% |
| CATCGATATCAACACCTAAG+AGG | + | chr3_3:9425789-9425808 | None:intergenic | 40.0% | |
| AGCATGGAATCAAAGTTGCT+AGG | - | chr3_3:9425818-9425837 | Msa0441130:intron | 40.0% | |
| TTCAGTTGCATGTGCTGAAA+TGG | - | chr3_3:9425864-9425883 | Msa0441130:intron | 40.0% | |
| TTTCAGTTACGCTATCCTGA+TGG | - | chr3_3:9426083-9426102 | Msa0441130:intron | 40.0% | |
| ACAATTGAGTCATCTCCATC+AGG | + | chr3_3:9426101-9426120 | None:intergenic | 40.0% | |
| CTGCACATGGTTTCTACAAT+TGG | + | chr3_3:9426262-9426281 | None:intergenic | 40.0% | |
| !!! | ACCATGTGCAGTTTTAAAGG+CGG | - | chr3_3:9426271-9426290 | Msa0441130:intron | 40.0% |
| ! | CTCATCGCCATACAATTTTC+TGG | - | chr3_3:9426301-9426320 | Msa0441130:intron | 40.0% |
| !! | TTTCTTTTAGTTGACCTGCG+AGG | + | chr3_3:9426333-9426352 | None:intergenic | 40.0% |
| GCAGGTCAACTAAAAGAAAC+TGG | - | chr3_3:9426334-9426353 | Msa0441130:intron | 40.0% | |
| ATGTCCTCATGTTTGGGTAT+GGG | - | chr3_3:9426377-9426396 | Msa0441130:CDS | 40.0% | |
| TGGGAAAGCCATAATTGCTT+TGG | - | chr3_3:9426396-9426415 | Msa0441130:CDS | 40.0% | |
| CGAGAAGAGAAAAAGATGCA+GGG | + | chr3_3:9426503-9426522 | None:intergenic | 40.0% | |
| TGCAGATTTCCATACAGCAA+AGG | - | chr3_3:9426686-9426705 | Msa0441130:CDS | 40.0% | |
| TCATCAAAAGCAATGTCCCA+TGG | + | chr3_3:9426818-9426837 | None:intergenic | 40.0% | |
| !! | TGGGACATTGCTTTTGATGA+TGG | - | chr3_3:9426818-9426837 | Msa0441130:intron | 40.0% |
| !! | TGATGATGGTTAGTTGCATG+AGG | - | chr3_3:9426832-9426851 | Msa0441130:intron | 40.0% |
| ! | CTTATAAAGGAGCGTGAAGT+GGG | - | chr3_3:9426921-9426940 | Msa0441130:intron | 40.0% |
| !! | TTTAGGTGTCTGATGGACTT+TGG | - | chr3_3:9426967-9426986 | Msa0441130:intron | 40.0% |
| !! | GAGGCTCTGAAATTCATGTA+AGG | - | chr3_3:9427155-9427174 | Msa0441130:intron | 40.0% |
| AGGGATACTACACATGAGTA+CGG | - | chr3_3:9427314-9427333 | Msa0441130:intron | 40.0% | |
| !! | ACTGAAATAGATCGGCTTGT+TGG | - | chr3_3:9427432-9427451 | Msa0441130:intron | 40.0% |
| !! | CTGAAATAGATCGGCTTGTT+GGG | - | chr3_3:9427433-9427452 | Msa0441130:intron | 40.0% |
| AACGATTGTTTCAACGGAAC+AGG | + | chr3_3:9427588-9427607 | None:intergenic | 40.0% | |
| ! | CATTTGTTTCTTCCCTCATG+TGG | - | chr3_3:9427632-9427651 | Msa0441130:intron | 40.0% |
| GTAAAAGTTGCACCACATGA+GGG | + | chr3_3:9427647-9427666 | None:intergenic | 40.0% | |
| TGTAAAAGTTGCACCACATG+AGG | + | chr3_3:9427648-9427667 | None:intergenic | 40.0% | |
| TTATTGCTACAAAGCGGAGT+TGG | - | chr3_3:9427797-9427816 | Msa0441130:intron | 40.0% | |
| TATTGCTACAAAGCGGAGTT+GGG | - | chr3_3:9427798-9427817 | Msa0441130:intron | 40.0% | |
| AGTAGTAATCCACGAGAACA+GGG | + | chr3_3:9427871-9427890 | None:intergenic | 40.0% | |
| AAGTAGTAATCCACGAGAAC+AGG | + | chr3_3:9427872-9427891 | None:intergenic | 40.0% | |
| ! | GCCTAGTATGCTGGAATTTT+TGG | - | chr3_3:9428195-9428214 | Msa0441130:intron | 40.0% |
| GCCAAAAATTCCAGCATACT+AGG | + | chr3_3:9428199-9428218 | None:intergenic | 40.0% | |
| ! | GGCATGCATACTTATTGACT+TGG | - | chr3_3:9428216-9428235 | Msa0441130:intron | 40.0% |
| !! | GATATGATGTCTTTTCAGGC+TGG | - | chr3_3:9428238-9428257 | Msa0441130:intron | 40.0% |
| ! | CAAGGTCCATTCTGTGTTTT+AGG | - | chr3_3:9428449-9428468 | Msa0441130:intron | 40.0% |
| TAACCACGGCTCAATTGTAA+GGG | + | chr3_3:9428569-9428588 | None:intergenic | 40.0% | |
| ATAACCACGGCTCAATTGTA+AGG | + | chr3_3:9428570-9428589 | None:intergenic | 40.0% | |
| AAATGTCTGCGATCACTACT+GGG | + | chr3_3:9429028-9429047 | None:intergenic | 40.0% | |
| CTCTAGCAACATTAACCAGA+AGG | + | chr3_3:9429183-9429202 | None:intergenic | 40.0% | |
| ! | CTTCTGGTTAATGTTGCTAG+AGG | - | chr3_3:9429181-9429200 | Msa0441130:intron | 40.0% |
| ! | AGGTCCTCTTTTAGACTATG+AGG | - | chr3_3:9429201-9429220 | Msa0441130:intron | 40.0% |
| ACAGCCTCATAGTCTAAAAG+AGG | + | chr3_3:9429208-9429227 | None:intergenic | 40.0% | |
| ! | TCTTTTAGACTATGAGGCTG+TGG | - | chr3_3:9429207-9429226 | Msa0441130:intron | 40.0% |
| GTGGTCAAAAACCTTGAATC+CGG | - | chr3_3:9429226-9429245 | Msa0441130:intron | 40.0% | |
| ATCATGACTCCTCATATTGC+AGG | - | chr3_3:9429331-9429350 | Msa0441130:intron | 40.0% | |
| AGAACACTCCTATAGATCCA+TGG | - | chr3_3:9429360-9429379 | Msa0441130:intron | 40.0% | |
| AACCTTAGCCATGGATCTAT+AGG | + | chr3_3:9429371-9429390 | None:intergenic | 40.0% | |
| !! | ACTATAGGTTGTTGGTGATG+TGG | - | chr3_3:9429559-9429578 | Msa0441130:intron | 40.0% |
| TCATACGACTAGGGTCTGTT+TGG | + | chr3_3:9423081-9423100 | None:intergenic | 45.0% | |
| GGCTTAACGAGCTTATCTAC+TGG | + | chr3_3:9423335-9423354 | None:intergenic | 45.0% | |
| CTCGTTAAGCCAATCCAAAC+AGG | - | chr3_3:9423344-9423363 | Msa0441130:intron | 45.0% | |
| CAACTAAGGCCTGTTTGGAT+TGG | + | chr3_3:9423356-9423375 | None:intergenic | 45.0% | |
| AGATGAGAACATGGGAACTG+AGG | + | chr3_3:9423621-9423640 | None:intergenic | 45.0% | |
| GAGATCATCCTCTAACCAAG+TGG | - | chr3_3:9423909-9423928 | Msa0441130:intron | 45.0% | |
| TCATCCTCTAACCAAGTGGA+TGG | - | chr3_3:9423913-9423932 | Msa0441130:intron | 45.0% | |
| ACCCAAATTTGATTCCTGGC+TGG | - | chr3_3:9423983-9424002 | Msa0441130:intron | 45.0% | |
| ! | CTAGAAGGTACGTCTGACTA+AGG | + | chr3_3:9424015-9424034 | None:intergenic | 45.0% |
| GATGCCAATCTGACAATCAC+TGG | - | chr3_3:9424525-9424544 | Msa0441130:CDS | 45.0% | |
| AATCACTGGAACTGGTGTGA+TGG | - | chr3_3:9424539-9424558 | Msa0441130:CDS | 45.0% | |
| AAGGGAATTTAAGTGGCCAG+CGG | - | chr3_3:9424670-9424689 | Msa0441130:intron | 45.0% | |
| !! | AATGTTGAAGGGCTAGCTTC+TGG | - | chr3_3:9424748-9424767 | Msa0441130:intron | 45.0% |
| !! | ATGTTGAAGGGCTAGCTTCT+GGG | - | chr3_3:9424749-9424768 | Msa0441130:intron | 45.0% |
| ! | GGCATGAGTAGTGGAATGAA+TGG | - | chr3_3:9424774-9424793 | Msa0441130:intron | 45.0% |
| CAAAGATAAACAGACGGGCA+CGG | - | chr3_3:9424844-9424863 | Msa0441130:intron | 45.0% | |
| ! | CAGGAGTTACCAGCTTTTGA+TGG | - | chr3_3:9424962-9424981 | Msa0441130:intron | 45.0% |
| ! | GGAGTTACCAGCTTTTGATG+GGG | - | chr3_3:9424964-9424983 | Msa0441130:intron | 45.0% |
| !! | CCATTGCTTTTCCTCTCCAT+CGG | + | chr3_3:9425056-9425075 | None:intergenic | 45.0% |
| ! | AATGGCATATGCTTTGGGTG+CGG | - | chr3_3:9425071-9425090 | Msa0441130:intron | 45.0% |
| CTGAACATTGATGTGAGGGA+CGG | + | chr3_3:9425106-9425125 | None:intergenic | 45.0% | |
| ! | CAGAGCTGATTCTTATGTGC+AGG | - | chr3_3:9425199-9425218 | Msa0441130:intron | 45.0% |
| CCTTGGGAATTTCTTCCAAC+GGG | + | chr3_3:9425575-9425594 | None:intergenic | 45.0% | |
| GCCTTGGGAATTTCTTCCAA+CGG | + | chr3_3:9425576-9425595 | None:intergenic | 45.0% | |
| ATCGATGCTGCAACAAAGCA+TGG | - | chr3_3:9425802-9425821 | Msa0441130:intron | 45.0% | |
| AATTTCCAGTAGCACCACTG+GGG | + | chr3_3:9425846-9425865 | None:intergenic | 45.0% | |
| GAATTTCCAGTAGCACCACT+GGG | + | chr3_3:9425847-9425866 | None:intergenic | 45.0% | |
| TGAATTTCCAGTAGCACCAC+TGG | + | chr3_3:9425848-9425867 | None:intergenic | 45.0% | |
| !! | ACCGCCTTTAAAACTGCACA+TGG | + | chr3_3:9426275-9426294 | None:intergenic | 45.0% |
| CATGTCCTCATGTTTGGGTA+TGG | - | chr3_3:9426376-9426395 | Msa0441130:CDS | 45.0% | |
| CTTTCCCATACCCAAACATG+AGG | + | chr3_3:9426384-9426403 | None:intergenic | 45.0% | |
| GCGAGAAGAGAAAAAGATGC+AGG | + | chr3_3:9426504-9426523 | None:intergenic | 45.0% | |
| TTGTGTCCAGGTGCACAAAA+GGG | + | chr3_3:9426531-9426550 | None:intergenic | 45.0% | |
| TTTGTGTCCAGGTGCACAAA+AGG | + | chr3_3:9426532-9426551 | None:intergenic | 45.0% | |
| ! | GCATGACAGATTTTGTGTCC+AGG | + | chr3_3:9426543-9426562 | None:intergenic | 45.0% |
| TCCATACAGCAAAGGAAGCT+TGG | - | chr3_3:9426694-9426713 | Msa0441130:CDS | 45.0% | |
| ! | TCCAAGCTTCCTTTGCTGTA+TGG | + | chr3_3:9426698-9426717 | None:intergenic | 45.0% |
| CCACTTCACGCTCCTTTATA+AGG | + | chr3_3:9426923-9426942 | None:intergenic | 45.0% | |
| ! | CCTTATAAAGGAGCGTGAAG+TGG | - | chr3_3:9426920-9426939 | Msa0441130:intron | 45.0% |
| AATGCTCAGAGGAGATTCCT+AGG | + | chr3_3:9427214-9427233 | None:intergenic | 45.0% | |
| GGGATACTACACATGAGTAC+GGG | - | chr3_3:9427315-9427334 | Msa0441130:intron | 45.0% | |
| GGATACTACACATGAGTACG+GGG | - | chr3_3:9427316-9427335 | Msa0441130:intron | 45.0% | |
| AGTACGGGGCGATACAATTA+TGG | - | chr3_3:9427330-9427349 | Msa0441130:intron | 45.0% | |
| ! | AACTAAGATCGGCTCAAGCT+AGG | - | chr3_3:9427521-9427540 | Msa0441130:intron | 45.0% |
| TTGTTTCAACGGAACAGGCT+AGG | + | chr3_3:9427583-9427602 | None:intergenic | 45.0% | |
| !!! | ATTTTGGGGTTCGGGAACAT+TGG | - | chr3_3:9427733-9427752 | Msa0441130:intron | 45.0% |
| ! | ATTTTCCTTCCCTGTTCTCG+TGG | - | chr3_3:9427859-9427878 | Msa0441130:intron | 45.0% |
| CAATTGTAAGGGAACATCCC+AGG | + | chr3_3:9428558-9428577 | None:intergenic | 45.0% | |
| AGTAGCCTAAGGCTGTAAGT+TGG | - | chr3_3:9428737-9428756 | Msa0441130:intron | 45.0% | |
| ! | GTAAGTTGGAGGACATAGTG+AGG | - | chr3_3:9428751-9428770 | Msa0441130:intron | 45.0% |
| !! | TCCAATCACATGCTGACTTG+AGG | - | chr3_3:9428775-9428794 | Msa0441130:intron | 45.0% |
| TCCTCAAGTCAGCATGTGAT+TGG | + | chr3_3:9428779-9428798 | None:intergenic | 45.0% | |
| GAAATGTCTGCGATCACTAC+TGG | + | chr3_3:9429029-9429048 | None:intergenic | 45.0% | |
| !! | AGAAGGGCACCCTGAAATAA+AGG | + | chr3_3:9429166-9429185 | None:intergenic | 45.0% |
| ! | TTTATTTCAGGGTGCCCTTC+TGG | - | chr3_3:9429165-9429184 | Msa0441130:intron | 45.0% |
| AACCTTGAATCCGGACACTT+AGG | - | chr3_3:9429235-9429254 | Msa0441130:intron | 45.0% | |
| TTGAATCCGGACACTTAGGA+GGG | - | chr3_3:9429239-9429258 | Msa0441130:intron | 45.0% | |
| TCTGTAACGCCTGCAATATG+AGG | + | chr3_3:9429343-9429362 | None:intergenic | 45.0% | |
| CTCCTATAGATCCATGGCTA+AGG | - | chr3_3:9429366-9429385 | Msa0441130:intron | 45.0% | |
| ATCCATGGCTAAGGTTTGTG+TGG | - | chr3_3:9429375-9429394 | Msa0441130:intron | 45.0% | |
| GTGGTTCTTCAACTTCATGC+TGG | - | chr3_3:9429578-9429597 | Msa0441130:intron | 45.0% | |
| CATGCTGGAAATCCTTTGAC+AGG | - | chr3_3:9429593-9429612 | Msa0441130:intron | 45.0% | |
| AATACACAACAACCGTTGCC+TGG | + | chr3_3:9429738-9429757 | None:intergenic | 45.0% | |
| CGACTAGGGTCTGTTTGGAT+TGG | + | chr3_3:9423076-9423095 | None:intergenic | 50.0% | |
| GAGACCATCCACTTGGTTAG+AGG | + | chr3_3:9423920-9423939 | None:intergenic | 50.0% | |
| ATCACTCGAGACCATCCACT+TGG | + | chr3_3:9423927-9423946 | None:intergenic | 50.0% | |
| GACTAAGGATTGTTCCAGCC+AGG | + | chr3_3:9424000-9424019 | None:intergenic | 50.0% | |
| !! | TTCTGGGTTGGCATGAGTAG+TGG | - | chr3_3:9424765-9424784 | Msa0441130:intron | 50.0% |
| ! | CTGCTGCTACAGCTCAGTTT+TGG | + | chr3_3:9424911-9424930 | None:intergenic | 50.0% |
| CAAAACTGAGCTGTAGCAGC+AGG | - | chr3_3:9424909-9424928 | Msa0441130:intron | 50.0% | |
| GGATTTGCCCCATCAAAAGC+TGG | + | chr3_3:9424974-9424993 | None:intergenic | 50.0% | |
| CGTATCAAGAACCGATGGAG+AGG | - | chr3_3:9425042-9425061 | Msa0441130:intron | 50.0% | |
| CCGATGGAGAGGAAAAGCAA+TGG | - | chr3_3:9425053-9425072 | Msa0441130:intron | 50.0% | |
| ! | TATGCTTTGGGTGCGGAGAA+AGG | - | chr3_3:9425078-9425097 | Msa0441130:intron | 50.0% |
| !! | GTAGGTTGATGTTCTCCCGT+TGG | - | chr3_3:9425557-9425576 | Msa0441130:CDS | 50.0% |
| CCCGTTGGAAGAAATTCCCA+AGG | - | chr3_3:9425572-9425591 | Msa0441130:CDS | 50.0% | |
| ! | AATGCAGTATGGTGTTGGGC+TGG | - | chr3_3:9425680-9425699 | Msa0441130:intron | 50.0% |
| AAAGTTGCTAGGATCCCCAG+TGG | - | chr3_3:9425829-9425848 | Msa0441130:intron | 50.0% | |
| !! | TTTTCTGGTAACCACCTCGC+AGG | - | chr3_3:9426316-9426335 | Msa0441130:intron | 50.0% |
| !! | CTTTTAGTTGACCTGCGAGG+TGG | + | chr3_3:9426330-9426349 | None:intergenic | 50.0% |
| TCCAGGTGCACAAAAGGGAA+TGG | + | chr3_3:9426526-9426545 | None:intergenic | 50.0% | |
| AGGAAGCTTGGAGAGCCTAT+CGG | - | chr3_3:9426706-9426725 | Msa0441130:CDS | 50.0% | |
| GTGAAGTGGGTAGATGATCC+AGG | - | chr3_3:9426934-9426953 | Msa0441130:intron | 50.0% | |
| ATGTGCTTCTAGGCTGTGTC+TGG | - | chr3_3:9427131-9427150 | Msa0441130:intron | 50.0% | |
| GCTCAAGCTAGGTCTGATGT+AGG | - | chr3_3:9427532-9427551 | Msa0441130:intron | 50.0% | |
| AGCTAGGTCTGATGTAGGCT+AGG | - | chr3_3:9427537-9427556 | Msa0441130:intron | 50.0% | |
| TCTGATGTAGGCTAGGCCAT+AGG | - | chr3_3:9427544-9427563 | Msa0441130:intron | 50.0% | |
| GCACGGCGATTGAAACCATT+TGG | - | chr3_3:9427766-9427785 | Msa0441130:intron | 50.0% | |
| GTAATCCACGAGAACAGGGA+AGG | + | chr3_3:9427867-9427886 | None:intergenic | 50.0% | |
| CACACACACACACACACGTA+GGG | - | chr3_3:9428425-9428444 | Msa0441130:intron | 50.0% | |
| TTGTAAGGGAACATCCCAGG+AGG | + | chr3_3:9428555-9428574 | None:intergenic | 50.0% | |
| GTTCCCTTACAATTGAGCCG+TGG | - | chr3_3:9428563-9428582 | Msa0441130:intron | 50.0% | |
| ! | AGCCTAAGGCTGTAAGTTGG+AGG | - | chr3_3:9428740-9428759 | Msa0441130:intron | 50.0% |
| GTCCTCCAACTTACAGCCTT+AGG | + | chr3_3:9428745-9428764 | None:intergenic | 50.0% | |
| CTCCTAAGTGTCCGGATTCA+AGG | + | chr3_3:9429240-9429259 | None:intergenic | 50.0% | |
| CTTGAATCCGGACACTTAGG+AGG | - | chr3_3:9429238-9429257 | Msa0441130:intron | 50.0% | |
| AGGAACCGATGTTGCATGGA+CGG | - | chr3_3:9429264-9429283 | Msa0441130:intron | 50.0% | |
| AGCCACACAAACCTTAGCCA+TGG | + | chr3_3:9429380-9429399 | None:intergenic | 50.0% | |
| ! | CAAATGATGGGACCCCTTCC+CGG | - | chr3_3:9424342-9424361 | Msa0441130:intron | 55.0% |
| CTAGAGCTCCCGCATATGCA+GGG | + | chr3_3:9424369-9424388 | None:intergenic | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | + | chr3_3:9424370-9424389 | None:intergenic | 55.0% | |
| !! | TGAAGGGCTAGCTTCTGGGT+TGG | - | chr3_3:9424753-9424772 | Msa0441130:intron | 55.0% |
| ! | CAGTATGGTGTTGGGCTGGA+AGG | - | chr3_3:9425684-9425703 | Msa0441130:intron | 55.0% |
| ! | GCCATTCCCTTTTGTGCACC+TGG | - | chr3_3:9426522-9426541 | Msa0441130:intron | 55.0% |
| CTTCTAGGCTGTGTCTGGAG+AGG | - | chr3_3:9427136-9427155 | Msa0441130:intron | 55.0% | |
| AGGCCATAGGCTCCATTGAC+CGG | - | chr3_3:9427557-9427576 | Msa0441130:intron | 55.0% | |
| TTCAACGGAACAGGCTAGGC+CGG | + | chr3_3:9427579-9427598 | None:intergenic | 55.0% | |
| GCACACACACACACACACGT+AGG | - | chr3_3:9428424-9428443 | Msa0441130:intron | 55.0% | |
| CACACACACACGTAGGGTCA+AGG | - | chr3_3:9428431-9428450 | Msa0441130:intron | 55.0% | |
| TGGGTTCAAGCGCAAGAGGT+TGG | + | chr3_3:9429009-9429028 | None:intergenic | 55.0% | |
| CTACTGGGTTCAAGCGCAAG+AGG | + | chr3_3:9429013-9429032 | None:intergenic | 55.0% | |
| TCCTAGCCCTCCTAAGTGTC+CGG | + | chr3_3:9429248-9429267 | None:intergenic | 55.0% | |
| GGCTAGGAACCGATGTTGCA+TGG | - | chr3_3:9429260-9429279 | Msa0441130:intron | 55.0% | |
| TGGCTCCGTCCATGCAACAT+CGG | + | chr3_3:9429272-9429291 | None:intergenic | 55.0% | |
| CTCTTCGGTTCACAGGGCCT+TGG | + | chr3_3:9424053-9424072 | None:intergenic | 60.0% | |
| CGGGAAGGGGTCCCATCATT+TGG | + | chr3_3:9424344-9424363 | None:intergenic | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr3_3:9424357-9424376 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | chr3_3:9424358-9424377 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | - | chr3_3:9424357-9424376 | Msa0441130:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | - | chr3_3:9424358-9424377 | Msa0441130:intron | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | - | chr3_3:9424374-9424393 | Msa0441130:intron | 60.0% |
| !! | AGGATCCCCAGTGGTGCTAC+TGG | - | chr3_3:9425838-9425857 | Msa0441130:intron | 60.0% |
| AGGCCGGTCAATGGAGCCTA+TGG | + | chr3_3:9427563-9427582 | None:intergenic | 60.0% | |
| GAACAGGCTAGGCCGGTCAA+TGG | + | chr3_3:9427572-9427591 | None:intergenic | 60.0% | |
| TCCGGACACTTAGGAGGGCT+AGG | - | chr3_3:9429244-9429263 | Msa0441130:intron | 60.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | + | chr3_3:9424359-9424378 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | + | chr3_3:9424363-9424382 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | + | chr3_3:9424364-9424383 | None:intergenic | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | - | chr3_3:9424375-9424394 | Msa0441130:intron | 65.0% |
| !! | AGCGCAAGAGGTTGGTGCGC+AGG | + | chr3_3:9429001-9429020 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 9422425 | 9429868 | 9422425 | ID=Msa0441130;Name=Msa0441130 |
| chr3_3 | mRNA | 9422425 | 9429868 | 9422425 | ID=Msa0441130-mRNA-1;Parent=Msa0441130;Name=Msa0441130-mRNA-1;_AED=0.04;_eAED=0.04;_QI=56|1|1|1|1|1|10|234|382 |
| chr3_3 | exon | 9422425 | 9422727 | 9422425 | ID=Msa0441130-mRNA-1:exon:1948;Parent=Msa0441130-mRNA-1 |
| chr3_3 | exon | 9422906 | 9423118 | 9422906 | ID=Msa0441130-mRNA-1:exon:1947;Parent=Msa0441130-mRNA-1 |
| chr3_3 | exon | 9423996 | 9424037 | 9423996 | ID=Msa0441130-mRNA-1:exon:1946;Parent=Msa0441130-mRNA-1 |
| chr3_3 | exon | 9424237 | 9424343 | 9424237 | ID=Msa0441130-mRNA-1:exon:1945;Parent=Msa0441130-mRNA-1 |
| chr3_3 | exon | 9424437 | 9424566 | 9424437 | ID=Msa0441130-mRNA-1:exon:1944;Parent=Msa0441130-mRNA-1 |
| chr3_3 | exon | 9425543 | 9425614 | 9425543 | ID=Msa0441130-mRNA-1:exon:1943;Parent=Msa0441130-mRNA-1 |
| chr3_3 | exon | 9426372 | 9426499 | 9426372 | ID=Msa0441130-mRNA-1:exon:1942;Parent=Msa0441130-mRNA-1 |
| chr3_3 | exon | 9426588 | 9426732 | 9426588 | ID=Msa0441130-mRNA-1:exon:1941;Parent=Msa0441130-mRNA-1 |
| chr3_3 | exon | 9428613 | 9428751 | 9428613 | ID=Msa0441130-mRNA-1:exon:1940;Parent=Msa0441130-mRNA-1 |
| chr3_3 | exon | 9429709 | 9429868 | 9429709 | ID=Msa0441130-mRNA-1:exon:1939;Parent=Msa0441130-mRNA-1 |
| chr3_3 | five_prime_UTR | 9429813 | 9429868 | 9429813 | ID=Msa0441130-mRNA-1:five_prime_utr;Parent=Msa0441130-mRNA-1 |
| chr3_3 | CDS | 9429709 | 9429812 | 9429709 | ID=Msa0441130-mRNA-1:cds;Parent=Msa0441130-mRNA-1 |
| chr3_3 | CDS | 9428613 | 9428751 | 9428613 | ID=Msa0441130-mRNA-1:cds;Parent=Msa0441130-mRNA-1 |
| chr3_3 | CDS | 9426588 | 9426732 | 9426588 | ID=Msa0441130-mRNA-1:cds;Parent=Msa0441130-mRNA-1 |
| chr3_3 | CDS | 9426372 | 9426499 | 9426372 | ID=Msa0441130-mRNA-1:cds;Parent=Msa0441130-mRNA-1 |
| chr3_3 | CDS | 9425543 | 9425614 | 9425543 | ID=Msa0441130-mRNA-1:cds;Parent=Msa0441130-mRNA-1 |
| chr3_3 | CDS | 9424437 | 9424566 | 9424437 | ID=Msa0441130-mRNA-1:cds;Parent=Msa0441130-mRNA-1 |
| chr3_3 | CDS | 9424237 | 9424343 | 9424237 | ID=Msa0441130-mRNA-1:cds;Parent=Msa0441130-mRNA-1 |
| chr3_3 | CDS | 9423996 | 9424037 | 9423996 | ID=Msa0441130-mRNA-1:cds;Parent=Msa0441130-mRNA-1 |
| chr3_3 | CDS | 9422906 | 9423118 | 9422906 | ID=Msa0441130-mRNA-1:cds;Parent=Msa0441130-mRNA-1 |
| chr3_3 | CDS | 9422659 | 9422727 | 9422659 | ID=Msa0441130-mRNA-1:cds;Parent=Msa0441130-mRNA-1 |
| chr3_3 | three_prime_UTR | 9422425 | 9422658 | 9422425 | ID=Msa0441130-mRNA-1:three_prime_utr;Parent=Msa0441130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
