AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0322890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0322890 MtrunA17_Chr2g0293491 76.190 294 12 2 1 236 1 294 1.51e-153 428
Msa0322890 MtrunA17_Chr4g0051261 89.394 132 14 0 105 236 163 294 2.03e-87 260
Msa0322890 MtrunA17_Chr4g0051261 93.396 106 7 0 1 106 1 106 3.58e-63 199
Msa0322890 MtrunA17_Chr8g0358921 37.288 295 122 4 1 232 44 338 1.37e-58 189
Msa0322890 MtrunA17_Chr6g0483151 38.028 284 119 5 2 229 12 294 3.95e-52 174
Msa0322890 MtrunA17_Chr4g0002001 57.031 128 54 1 105 232 180 306 4.65e-50 166
Msa0322890 MtrunA17_Chr4g0002001 55.660 106 34 2 1 93 1 106 1.97e-27 106
Msa0322890 MtrunA17_Chr1g0187371 54.688 128 57 1 105 232 185 311 1.25e-49 164
Msa0322890 MtrunA17_Chr1g0187371 48.624 109 43 3 2 104 16 117 2.54e-24 98.6
Msa0322890 MtrunA17_Chr8g0369451 32.082 293 139 6 1 236 1 290 1.12e-47 163
Msa0322890 MtrunA17_Chr5g0409421 31.399 293 141 5 1 236 1 290 3.46e-46 159
Msa0322890 MtrunA17_Chr3g0099951 33.448 290 132 6 2 232 12 299 1.39e-45 156
Msa0322890 MtrunA17_Chr4g0057791 34.333 300 127 9 1 231 215 513 2.81e-45 158
Msa0322890 MtrunA17_Chr8g0377071 35.314 303 120 9 1 232 382 679 3.27e-44 157
Msa0322890 MtrunA17_Chr8g0360761 40.933 193 97 3 39 230 9 185 4.68e-44 146
Msa0322890 MtrunA17_Chr3g0122781 33.648 318 120 8 1 232 413 725 3.32e-41 149
Msa0322890 MtrunA17_Chr8g0339221 31.058 293 143 5 1 236 1 291 1.34e-39 141
Msa0322890 MtrunA17_Chr4g0030151 30.556 288 137 6 10 235 45 331 3.36e-38 136
Msa0322890 MtrunA17_Chr3g0141871 28.716 296 141 4 3 232 31 322 5.11e-38 135
Msa0322890 MtrunA17_Chr4g0045841 29.268 287 135 6 10 232 61 343 5.35e-35 128
Msa0322890 MtrunA17_Chr8g0387401 29.553 291 136 6 7 232 55 341 2.51e-34 126
Msa0322890 MtrunA17_Chr6g0453711 29.932 294 145 5 2 235 108 400 3.36e-34 129
Msa0322890 MtrunA17_Chr8g0378831 29.630 297 137 7 3 232 31 322 4.40e-34 125
Msa0322890 MtrunA17_Chr3g0093571 48.413 126 64 1 105 229 199 324 1.31e-33 126
Msa0322890 MtrunA17_Chr3g0093571 47.000 100 37 1 4 87 25 124 3.77e-22 94.4
Msa0322890 MtrunA17_Chr3g0093391 47.619 126 65 1 105 229 197 322 2.34e-33 125
Msa0322890 MtrunA17_Chr3g0093391 45.000 100 39 1 4 87 23 122 8.49e-21 90.5
Msa0322890 MtrunA17_Chr2g0317501 30.479 292 134 8 2 229 132 418 3.54e-33 126
Msa0322890 MtrunA17_Chr4g0030231 28.866 291 138 6 7 232 43 329 4.08e-33 123
Msa0322890 MtrunA17_Chr7g0248461 28.125 288 138 7 7 229 41 324 4.29e-33 123
Msa0322890 MtrunA17_Chr3g0130781 45.000 140 61 4 106 230 191 329 3.11e-32 122
Msa0322890 MtrunA17_Chr3g0130781 46.739 92 44 2 1 87 15 106 1.12e-18 84.3
Msa0322890 MtrunA17_Chr8g0383451 31.802 283 126 6 10 230 4 281 3.96e-32 122
Msa0322890 MtrunA17_Chr8g0348481 27.083 288 141 6 7 229 40 323 7.05e-32 119
Msa0322890 MtrunA17_Chr5g0397261 29.167 288 135 7 10 232 47 330 1.09e-30 116
Msa0322890 MtrunA17_Chr3g0102571 42.969 128 72 1 106 232 242 369 2.10e-30 116
Msa0322890 MtrunA17_Chr3g0102571 39.175 97 54 1 3 94 31 127 7.75e-14 70.1
Msa0322890 MtrunA17_Chr7g0218071 30.169 295 144 9 2 235 118 411 4.83e-30 117
Msa0322890 MtrunA17_Chr2g0286421 36.571 175 102 5 56 229 220 386 2.22e-29 115
Msa0322890 MtrunA17_Chr2g0286421 48.315 89 42 3 2 87 100 187 7.16e-16 76.3
Msa0322890 MtrunA17_Chr3g0131861 41.270 126 72 2 105 229 257 381 2.91e-28 112
Msa0322890 MtrunA17_Chr3g0131861 49.425 87 40 3 4 87 97 182 8.55e-16 75.9
Msa0322890 MtrunA17_Chr5g0396361 41.667 132 75 2 99 229 294 424 3.03e-28 112
Msa0322890 MtrunA17_Chr5g0396361 43.182 88 48 1 2 87 138 225 4.12e-15 73.9
Msa0322890 MtrunA17_Chr8g0385971 38.816 152 88 3 79 229 227 374 6.35e-28 110
Msa0322890 MtrunA17_Chr8g0385971 45.349 86 45 1 4 87 90 175 2.24e-16 77.8
Msa0322890 MtrunA17_Chr4g0061141 35.795 176 104 4 56 230 223 390 1.04e-27 110
Msa0322890 MtrunA17_Chr4g0061141 37.963 108 62 4 2 106 103 208 4.98e-13 68.2
Msa0322890 MtrunA17_Chr6g0486031 39.062 128 76 2 106 231 275 402 1.75e-27 108
Msa0322890 MtrunA17_Chr4g0040141 36.601 153 90 4 79 229 266 413 2.36e-27 109
Msa0322890 MtrunA17_Chr4g0040141 41.860 86 48 1 4 87 129 214 1.47e-15 75.5
Msa0322890 MtrunA17_Chr8g0390341 38.281 128 77 2 106 231 288 415 5.43e-27 107
Msa0322890 MtrunA17_Chr4g0066691 39.394 132 78 2 99 229 258 388 2.95e-26 106
Msa0322890 MtrunA17_Chr4g0066691 40.741 108 59 4 2 106 102 207 2.77e-15 74.7
Msa0322890 MtrunA17_Chr7g0273601 34.868 152 94 4 79 229 244 391 3.05e-26 106
Msa0322890 MtrunA17_Chr7g0273601 44.944 89 45 3 2 87 105 192 3.79e-15 74.3
Msa0322890 MtrunA17_Chr1g0191221 37.879 132 80 2 99 229 276 406 3.96e-26 105
Msa0322890 MtrunA17_Chr1g0191221 42.593 108 57 4 2 106 120 225 2.99e-15 74.3
Msa0322890 MtrunA17_Chr2g0320011 25.086 291 143 9 10 233 94 376 5.21e-26 104
Msa0322890 MtrunA17_Chr2g0284091 25.773 291 141 9 10 233 46 328 6.54e-26 103
Msa0322890 MtrunA17_Chr2g0324461 41.353 133 70 3 101 229 297 425 8.28e-26 105
Msa0322890 MtrunA17_Chr2g0324461 40.698 86 49 1 4 87 141 226 1.54e-15 75.5
Msa0322890 MtrunA17_Chr8g0359091 30.000 300 142 7 3 235 25 323 5.38e-25 102
Msa0322890 MtrunA17_Chr5g0443351 30.303 297 139 7 3 232 21 316 6.25e-25 102
Msa0322890 MtrunA17_Chr2g0287271 29.000 300 145 7 3 235 24 322 8.63e-24 99.4
Msa0322890 MtrunA17_Chr1g0201571 28.276 290 141 7 2 229 124 408 9.86e-24 99.4
Msa0322890 MtrunA17_Chr4g0065851 28.767 292 140 7 8 232 29 319 1.01e-23 99.0
Msa0322890 MtrunA17_Chr3g0102601 30.846 201 124 5 47 232 7 207 2.10e-23 94.7
Msa0322890 MtrunA17_Chr7g0246591 35.294 136 84 3 100 233 296 429 3.12e-23 97.4
Msa0322890 MtrunA17_Chr3g0102581 28.311 219 138 5 3 212 5 213 4.93e-23 93.2
Msa0322890 MtrunA17_Chr3g0096631 30.000 300 142 7 3 235 24 322 1.76e-22 95.5
Msa0322890 MtrunA17_Chr8g0350311 32.192 146 75 2 100 233 294 427 8.07e-22 93.2
Msa0322890 MtrunA17_Chr1g0193081 33.088 136 87 3 100 233 230 363 3.06e-21 91.3
Msa0322890 MtrunA17_Chr7g0270371 25.263 285 150 10 10 233 81 363 1.90e-20 89.0
Msa0322890 MtrunA17_Chr2g0277011 30.070 143 82 2 100 233 245 378 2.68e-20 88.6
Msa0322890 MtrunA17_Chr1g0194201 24.399 291 157 8 4 233 75 363 4.87e-20 87.8
Msa0322890 MtrunA17_Chr4g0030241 53.968 63 29 0 106 168 62 124 1.84e-18 80.1
Msa0322890 MtrunA17_Chr8g0392811 34.328 134 83 3 106 235 282 414 3.91e-18 82.8
Msa0322890 MtrunA17_Chr6g0482681 36.567 134 80 3 106 235 254 386 1.03e-15 75.9
Msa0322890 MtrunA17_Chr4g0053821 30.000 140 89 3 103 233 239 378 1.68e-15 74.7
Msa0322890 MtrunA17_Chr4g0053951 31.206 141 86 4 103 233 270 409 2.88e-15 74.3
Msa0322890 MtrunA17_Chr5g0401371 29.078 141 89 4 103 233 265 404 2.29e-14 71.6
Msa0322890 MtrunA17_Chr8g0378871 33.673 98 63 1 134 229 6 103 4.34e-14 67.8
Msa0322890 MtrunA17_Chr2g0314321 34.211 152 70 4 106 232 190 336 2.59e-13 68.9
Msa0322890 MtrunA17_Chr3g0139371 31.013 158 88 4 93 230 243 399 2.75e-13 68.6
Msa0322890 MtrunA17_Chr1g0205421 28.293 205 88 7 1 146 9 213 8.02e-13 67.0
Msa0322890 MtrunA17_Chr8g0369241 26.484 219 92 6 10 163 145 359 9.67e-13 67.4
Msa0322890 MtrunA17_Chr3g0116701 30.625 160 84 6 93 229 264 419 1.19e-11 63.5
Msa0322890 MtrunA17_Chr4g0058241 31.973 147 73 6 106 229 281 423 2.77e-11 62.8
Msa0322890 MtrunA17_Chr5g0419441 40.741 81 45 2 3 82 238 316 2.88e-11 62.8
Msa0322890 MtrunA17_Chr3g0107011 39.759 83 49 1 1 82 11 93 5.17e-11 62.0
Msa0322890 MtrunA17_Chr8g0392821 31.429 105 58 2 123 227 47 137 7.55e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0322890 AT3G48750.1 63.605 294 49 2 1 236 1 294 2.74e-127 362
Msa0322890 AT3G54180.1 43.934 305 97 6 1 232 1 304 1.57e-78 239
Msa0322890 AT1G76540.1 41.275 298 108 6 1 232 11 307 3.35e-77 235
Msa0322890 AT2G38620.4 44.578 249 116 5 1 232 1 244 2.11e-67 208
Msa0322890 AT5G63370.2 37.294 303 119 5 1 232 160 462 7.81e-59 193
Msa0322890 AT5G63370.3 37.294 303 119 5 1 232 160 462 7.81e-59 193
Msa0322890 AT5G63370.7 37.294 303 119 5 1 232 294 596 1.58e-57 192
Msa0322890 AT5G63370.8 37.294 303 119 5 1 232 294 596 1.58e-57 192
Msa0322890 AT5G63370.4 37.294 303 119 5 1 232 294 596 1.58e-57 192
Msa0322890 AT5G63370.6 37.294 303 119 5 1 232 294 596 1.58e-57 192
Msa0322890 AT5G63370.1 37.294 303 119 5 1 232 294 596 1.58e-57 192
Msa0322890 AT1G66750.1 39.298 285 116 5 1 229 10 293 7.98e-57 184
Msa0322890 AT1G73690.1 38.028 284 119 5 2 229 9 291 8.81e-56 183
Msa0322890 AT1G18040.1 37.324 284 121 6 2 229 10 292 1.38e-52 174
Msa0322890 AT1G20930.1 57.812 128 53 1 105 232 183 309 3.79e-52 171
Msa0322890 AT1G20930.1 47.458 118 56 2 1 112 13 130 1.53e-24 99.4
Msa0322890 AT2G38620.2 57.812 128 53 1 105 232 180 306 6.86e-52 171
Msa0322890 AT2G38620.2 56.604 106 33 3 1 93 1 106 3.53e-26 103
Msa0322890 AT5G63370.9 37.903 248 91 4 3 187 162 409 7.18e-49 166
Msa0322890 AT1G67580.1 34.333 300 127 8 1 232 403 700 2.29e-48 169
Msa0322890 AT1G67580.2 34.333 300 127 8 1 232 403 700 2.29e-48 169
Msa0322890 AT5G63370.5 37.600 250 93 4 1 187 294 543 2.05e-47 164
Msa0322890 AT5G63370.10 37.600 250 93 4 1 187 294 543 2.05e-47 164
Msa0322890 AT5G50860.2 34.843 287 124 8 4 229 114 398 4.10e-44 155
Msa0322890 AT5G50860.1 34.843 287 124 8 4 229 114 398 1.48e-43 154
Msa0322890 AT4G22940.1 31.849 292 133 6 2 230 101 389 6.76e-42 148
Msa0322890 AT4G13020.7 32.168 286 134 5 1 229 1 283 8.39e-42 146
Msa0322890 AT4G13020.6 32.168 286 134 5 1 229 1 283 1.36e-41 146
Msa0322890 AT4G13020.4 32.168 286 134 5 1 229 1 283 1.66e-41 146
Msa0322890 AT4G13020.1 32.168 286 134 5 1 229 1 283 2.40e-41 146
Msa0322890 AT4G22940.2 31.959 291 132 6 3 230 102 389 3.22e-41 148
Msa0322890 AT4G13020.2 31.707 287 136 5 1 230 9 292 3.09e-40 143
Msa0322890 AT4G13020.3 31.707 287 136 5 1 230 9 292 3.14e-40 143
Msa0322890 AT5G45430.1 29.530 298 140 6 1 236 1 290 6.99e-40 143
Msa0322890 AT5G45430.2 29.530 298 140 6 1 236 1 290 7.94e-40 143
Msa0322890 AT4G13020.8 30.508 295 136 5 1 229 1 292 2.32e-39 140
Msa0322890 AT4G13020.5 30.508 295 136 5 1 229 1 292 6.76e-39 140
Msa0322890 AT4G19110.2 28.188 298 144 6 1 236 1 290 9.23e-39 140
Msa0322890 AT4G19110.1 28.188 298 144 6 1 236 1 290 1.00e-38 140
Msa0322890 AT3G45640.1 30.877 285 134 6 10 232 44 327 1.42e-38 137
Msa0322890 AT3G59790.1 31.488 289 135 6 7 232 63 351 1.62e-38 138
Msa0322890 AT2G46070.1 28.521 284 142 5 7 229 44 327 8.97e-36 130
Msa0322890 AT1G59580.2 28.669 293 139 4 3 229 31 319 9.24e-36 130
Msa0322890 AT1G59580.1 28.669 293 139 4 3 229 31 319 9.24e-36 130
Msa0322890 AT2G46070.3 28.521 284 142 5 7 229 78 361 1.40e-35 130
Msa0322890 AT2G18170.1 28.716 296 141 5 3 232 31 322 6.16e-35 128
Msa0322890 AT1G10210.2 28.328 293 140 4 3 229 31 319 6.19e-35 128
Msa0322890 AT1G10210.3 28.328 293 140 4 3 229 31 319 6.19e-35 128
Msa0322890 AT1G10210.1 28.328 293 140 4 3 229 31 319 6.19e-35 128
Msa0322890 AT2G43790.1 29.268 287 135 6 10 232 69 351 1.57e-34 127
Msa0322890 AT5G63610.1 47.482 139 59 3 106 230 196 334 2.72e-34 128
Msa0322890 AT5G63610.1 46.667 90 45 2 1 87 22 111 8.45e-17 79.3
Msa0322890 AT2G46070.2 28.467 274 135 5 7 219 44 317 6.75e-34 124
Msa0322890 AT5G39420.1 30.450 289 138 7 2 229 103 389 3.62e-33 126
Msa0322890 AT4G11330.1 29.514 288 134 7 7 229 46 329 4.31e-33 123
Msa0322890 AT3G01085.3 31.724 290 134 8 2 229 113 400 1.48e-32 124
Msa0322890 AT3G01085.1 31.724 290 134 8 2 229 113 400 2.37e-32 124
Msa0322890 AT3G01085.2 31.724 290 134 8 2 229 113 400 2.37e-32 124
Msa0322890 AT5G10270.1 44.444 126 69 1 105 229 200 325 2.63e-32 123
Msa0322890 AT5G10270.1 47.000 100 37 1 4 87 26 125 4.72e-22 94.4
Msa0322890 AT5G64960.1 43.750 128 67 2 105 229 200 325 4.31e-32 122
Msa0322890 AT5G64960.1 47.000 100 37 1 4 87 26 125 7.18e-22 94.0
Msa0322890 AT5G64960.2 43.750 128 67 2 105 229 147 272 4.54e-32 122
Msa0322890 AT1G57700.1 30.508 295 140 7 2 234 144 435 4.64e-32 123
Msa0322890 AT4G36450.1 29.392 296 136 7 3 232 31 319 8.44e-32 119
Msa0322890 AT4G19110.3 36.478 159 95 2 79 236 81 234 9.43e-32 120
Msa0322890 AT4G10010.1 43.077 130 72 2 101 229 132 260 5.32e-29 114
Msa0322890 AT4G01370.1 27.758 281 142 6 10 229 49 329 1.02e-28 111
Msa0322890 AT4G10010.2 43.077 130 72 2 101 229 312 440 2.58e-28 112
Msa0322890 AT4G10010.2 43.182 88 48 1 2 87 154 241 1.82e-15 75.5
Msa0322890 AT5G44290.7 40.441 136 79 2 101 235 293 427 4.88e-28 111
Msa0322890 AT5G44290.7 43.023 86 47 1 4 87 137 222 5.65e-16 77.0
Msa0322890 AT1G03740.2 40.152 132 75 2 106 235 374 503 5.74e-28 112
Msa0322890 AT1G03740.2 43.023 86 47 1 4 87 213 298 7.71e-16 76.6
Msa0322890 AT1G03740.1 40.152 132 75 2 106 235 374 503 5.80e-28 112
Msa0322890 AT1G03740.1 43.023 86 47 1 4 87 213 298 9.13e-16 76.6
Msa0322890 AT1G09600.1 41.667 132 75 2 99 229 317 447 6.16e-28 112
Msa0322890 AT1G09600.1 39.252 107 62 2 2 106 161 266 3.51e-16 77.8
Msa0322890 AT5G44290.2 40.441 136 79 2 101 235 293 427 6.34e-28 111
Msa0322890 AT5G44290.2 43.023 86 47 1 4 87 137 222 8.19e-16 76.6
Msa0322890 AT5G44290.5 40.441 136 79 2 101 235 293 427 6.34e-28 111
Msa0322890 AT5G44290.5 43.023 86 47 1 4 87 137 222 8.19e-16 76.6
Msa0322890 AT5G44290.4 40.441 136 79 2 101 235 293 427 6.34e-28 111
Msa0322890 AT5G44290.4 43.023 86 47 1 4 87 137 222 8.19e-16 76.6
Msa0322890 AT5G44290.1 40.441 136 79 2 101 235 293 427 6.34e-28 111
Msa0322890 AT5G44290.1 43.023 86 47 1 4 87 137 222 8.19e-16 76.6
Msa0322890 AT5G44290.3 40.441 136 79 2 101 235 293 427 6.34e-28 111
Msa0322890 AT5G44290.3 43.023 86 47 1 4 87 137 222 8.19e-16 76.6
Msa0322890 AT5G44290.6 40.441 136 79 2 101 235 293 427 6.91e-28 111
Msa0322890 AT5G44290.6 43.023 86 47 1 4 87 137 222 5.46e-16 77.0
Msa0322890 AT1G71530.2 42.063 126 71 2 105 229 307 431 3.08e-27 108
Msa0322890 AT1G71530.2 44.318 88 47 1 2 87 145 232 5.71e-16 77.0
Msa0322890 AT1G71530.1 42.063 126 71 2 105 229 307 431 3.55e-27 109
Msa0322890 AT1G71530.1 44.318 88 47 1 2 87 145 232 1.37e-15 75.9
Msa0322890 AT4G28980.3 39.844 128 75 2 106 231 293 420 3.61e-27 108
Msa0322890 AT4G28980.1 39.844 128 75 2 106 231 293 420 3.61e-27 108
Msa0322890 AT4G28980.2 39.844 128 75 2 106 231 293 420 3.61e-27 108
Msa0322890 AT1G54610.1 40.299 134 74 3 99 229 272 402 7.68e-27 108
Msa0322890 AT1G54610.1 46.392 97 47 4 2 95 116 210 8.79e-16 76.3
Msa0322890 AT1G54610.3 40.299 134 74 3 99 229 272 402 7.68e-27 108
Msa0322890 AT1G54610.3 46.392 97 47 4 2 95 116 210 8.79e-16 76.3
Msa0322890 AT1G54610.2 40.299 134 74 3 99 229 272 402 7.68e-27 108
Msa0322890 AT1G54610.2 46.392 97 47 4 2 95 116 210 8.79e-16 76.3
Msa0322890 AT2G38620.3 56.604 106 33 3 1 93 1 106 1.36e-26 103
Msa0322890 AT2G38620.3 72.414 58 16 0 105 162 180 237 4.70e-25 99.8
Msa0322890 AT2G38620.1 56.604 106 33 3 1 93 1 106 1.36e-26 103
Msa0322890 AT2G38620.1 72.414 58 16 0 105 162 180 237 4.70e-25 99.8
Msa0322890 AT1G01560.2 38.889 126 75 1 106 229 201 326 1.59e-26 105
Msa0322890 AT1G53050.2 43.066 137 69 4 100 229 284 418 2.44e-26 107
Msa0322890 AT1G53050.2 42.593 108 57 4 2 106 132 237 2.09e-14 72.4
Msa0322890 AT1G53050.1 43.066 137 69 4 100 229 284 418 2.44e-26 107
Msa0322890 AT1G53050.1 42.593 108 57 4 2 106 132 237 2.09e-14 72.4
Msa0322890 AT1G74330.2 37.342 158 96 3 79 235 258 413 3.24e-26 107
Msa0322890 AT1G74330.2 38.889 108 61 4 2 106 119 224 6.49e-12 65.1
Msa0322890 AT1G74330.1 37.342 158 96 3 79 235 258 413 3.39e-26 106
Msa0322890 AT1G74330.1 38.889 108 61 4 2 106 119 224 6.52e-12 65.1
Msa0322890 AT1G06390.2 25.430 291 142 9 10 233 76 358 3.58e-26 105
Msa0322890 AT1G06390.1 25.430 291 142 9 10 233 76 358 3.58e-26 105
Msa0322890 AT1G74330.3 37.342 158 96 3 79 235 258 413 3.67e-26 106
Msa0322890 AT1G74330.3 38.889 108 61 4 2 106 119 224 5.33e-12 65.5
Msa0322890 AT4G18710.1 25.773 291 141 9 10 233 46 328 4.39e-26 104
Msa0322890 AT1G71530.3 41.935 124 70 2 105 227 307 429 5.44e-26 105
Msa0322890 AT1G71530.3 44.318 88 47 1 2 87 145 232 6.68e-16 76.6
Msa0322890 AT2G42880.2 30.508 295 137 6 8 235 29 322 5.68e-26 105
Msa0322890 AT3G14720.2 30.743 296 135 7 3 230 24 317 1.26e-25 103
Msa0322890 AT3G14720.3 30.743 296 135 7 3 230 24 317 1.26e-25 103
Msa0322890 AT2G30980.1 25.430 291 142 9 10 233 78 360 1.27e-25 103
Msa0322890 AT2G01450.3 28.333 300 147 7 3 235 15 313 1.66e-25 104
Msa0322890 AT2G01450.1 28.333 300 147 7 3 235 15 313 1.66e-25 104
Msa0322890 AT2G01450.2 28.333 300 147 7 3 235 15 313 1.66e-25 104
Msa0322890 AT2G01450.4 28.333 300 147 7 3 235 15 313 1.66e-25 104
Msa0322890 AT1G01560.3 38.655 119 71 1 106 222 201 319 1.93e-25 102
Msa0322890 AT1G18670.1 32.787 183 113 4 56 235 249 424 4.70e-25 103
Msa0322890 AT1G18670.1 40.741 108 59 4 2 106 129 234 5.61e-14 71.2
Msa0322890 AT1G18670.2 32.787 183 113 4 56 235 249 424 5.11e-25 103
Msa0322890 AT1G18670.2 40.741 108 59 4 2 106 129 234 3.74e-14 71.6
Msa0322890 AT1G18670.3 32.787 183 113 4 56 235 249 424 5.51e-25 103
Msa0322890 AT1G18670.3 40.741 108 59 4 2 106 129 234 5.58e-14 71.2
Msa0322890 AT1G07880.2 38.760 129 77 1 106 232 194 322 7.94e-25 100
Msa0322890 AT1G07880.2 32.353 102 64 1 7 103 36 137 5.98e-11 62.0
Msa0322890 AT1G33770.1 43.846 130 71 2 101 229 297 425 3.32e-24 100
Msa0322890 AT1G33770.1 43.182 88 48 1 2 87 139 226 5.07e-16 77.0
Msa0322890 AT3G14720.1 30.405 296 136 8 3 230 24 317 1.60e-23 99.0
Msa0322890 AT5G19010.1 28.667 300 146 7 3 235 24 322 4.19e-23 97.8
Msa0322890 AT3G61160.4 26.117 291 152 9 4 233 102 390 6.06e-23 96.7
Msa0322890 AT2G42880.1 29.831 295 139 7 8 235 29 322 9.97e-23 96.7
Msa0322890 AT3G61160.2 26.460 291 151 10 4 233 109 397 1.69e-22 95.5
Msa0322890 AT3G61160.1 33.824 136 86 3 100 233 257 390 2.19e-22 95.1
Msa0322890 AT4G18710.2 26.667 240 101 7 10 180 40 273 2.23e-22 92.8
Msa0322890 AT4G00720.1 25.965 285 148 9 10 233 144 426 5.62e-22 94.4
Msa0322890 AT5G14640.1 32.353 136 88 3 100 233 229 362 5.05e-21 90.9
Msa0322890 AT5G14640.2 32.353 136 88 3 100 233 229 362 5.05e-21 90.9
Msa0322890 AT1G57870.1 30.769 143 81 2 100 233 237 370 1.97e-20 89.4
Msa0322890 AT1G57870.4 30.769 143 81 2 100 233 237 370 1.97e-20 89.4
Msa0322890 AT1G57870.2 30.769 143 81 2 100 233 237 370 1.97e-20 89.4
Msa0322890 AT3G05840.2 31.618 136 89 3 100 233 228 361 2.01e-20 89.4
Msa0322890 AT3G05840.1 31.618 136 89 3 100 233 228 361 2.01e-20 89.4
Msa0322890 AT1G57870.3 30.769 143 81 2 100 233 237 370 2.15e-20 89.4
Msa0322890 AT1G09840.11 30.769 143 81 2 100 233 111 244 2.23e-20 87.8
Msa0322890 AT1G09840.3 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0322890 AT1G09840.7 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0322890 AT1G09840.10 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0322890 AT1G09840.6 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0322890 AT1G09840.4 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0322890 AT1G09840.1 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0322890 AT1G09840.9 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0322890 AT1G09840.5 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0322890 AT1G09840.8 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0322890 AT1G09840.2 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0322890 AT5G26751.1 31.618 136 89 3 100 233 224 357 8.40e-20 87.4
Msa0322890 AT3G61160.5 34.146 123 77 3 100 220 257 377 2.12e-19 86.3
Msa0322890 AT1G18150.3 27.609 297 147 7 3 232 103 398 3.11e-18 83.6
Msa0322890 AT1G18150.2 27.609 297 147 7 3 232 103 398 3.11e-18 83.6
Msa0322890 AT1G18150.1 27.609 297 147 7 3 232 103 398 3.11e-18 83.6
Msa0322890 AT3G05050.3 48.485 66 34 0 105 170 298 363 6.86e-18 82.8
Msa0322890 AT3G05050.3 40.187 107 61 2 2 106 136 241 3.24e-16 77.8
Msa0322890 AT3G05050.2 48.485 66 34 0 105 170 298 363 6.86e-18 82.8
Msa0322890 AT3G05050.2 40.187 107 61 2 2 106 136 241 3.24e-16 77.8
Msa0322890 AT3G05050.1 48.485 66 34 0 105 170 298 363 6.86e-18 82.8
Msa0322890 AT3G05050.1 40.187 107 61 2 2 106 136 241 3.24e-16 77.8
Msa0322890 AT3G18040.1 28.231 294 143 8 3 229 22 314 1.43e-17 81.6
Msa0322890 AT3G18040.5 28.231 294 143 8 3 229 17 309 1.47e-17 81.6
Msa0322890 AT3G18040.3 28.231 294 143 8 3 229 131 423 1.63e-17 81.6
Msa0322890 AT3G18040.4 28.231 294 143 8 3 229 131 423 1.98e-17 81.3
Msa0322890 AT2G23080.1 32.143 140 86 3 103 233 184 323 4.79e-17 79.3
Msa0322890 AT3G61160.3 39.080 87 50 2 100 185 257 341 1.13e-16 78.2
Msa0322890 AT3G61160.6 43.939 66 37 0 100 165 264 329 1.25e-16 78.2
Msa0322890 AT1G73670.1 36.296 135 73 4 106 232 255 384 1.80e-16 78.6
Msa0322890 AT1G71530.4 44.318 88 47 1 2 87 145 232 5.00e-16 76.6
Msa0322890 AT1G71530.4 52.083 48 23 0 105 152 307 354 2.09e-12 66.2
Msa0322890 AT5G67380.2 29.286 140 90 3 103 233 227 366 1.24e-15 75.5
Msa0322890 AT5G67380.1 29.286 140 90 3 103 233 260 399 1.42e-15 75.5
Msa0322890 AT1G53510.1 39.259 135 69 4 106 232 190 319 1.89e-15 75.5
Msa0322890 AT5G35980.2 27.982 218 89 6 10 163 128 341 7.76e-15 73.9
Msa0322890 AT2G23070.1 32.394 142 83 5 103 233 282 421 1.01e-14 73.2
Msa0322890 AT5G35980.3 27.273 231 100 6 2 168 85 311 1.11e-14 73.6
Msa0322890 AT5G35980.1 27.273 231 100 6 2 168 120 346 1.71e-14 72.8
Msa0322890 AT3G18040.2 35.821 134 81 3 106 235 100 232 3.47e-14 71.6
Msa0322890 AT3G50000.1 28.571 140 91 3 103 233 254 393 3.48e-14 71.6
Msa0322890 AT1G07880.1 56.000 50 22 0 106 155 194 243 1.19e-13 68.9
Msa0322890 AT1G07880.1 32.353 102 64 1 7 103 36 137 3.40e-11 62.0
Msa0322890 AT1G01560.4 54.000 50 23 0 106 155 201 250 2.50e-13 68.2
Msa0322890 AT1G01560.1 54.000 50 23 0 106 155 201 250 2.50e-13 68.2
Msa0322890 AT4G24740.10 31.757 148 72 6 106 229 75 217 3.75e-13 67.0
Msa0322890 AT4G24740.8 31.757 148 72 6 106 229 75 217 3.75e-13 67.0
Msa0322890 AT4G24740.6 31.757 148 72 6 106 229 178 320 8.90e-13 67.0
Msa0322890 AT4G24740.9 31.757 148 72 6 106 229 178 320 8.90e-13 67.0
Msa0322890 AT4G24740.2 31.757 148 72 6 106 229 178 320 8.90e-13 67.0
Msa0322890 AT4G24740.7 31.757 148 72 6 106 229 243 385 2.16e-12 66.2
Msa0322890 AT4G24740.1 31.757 148 72 6 106 229 281 423 2.16e-12 66.2
Msa0322890 AT3G53570.1 32.432 148 72 6 106 229 300 443 4.35e-12 65.5
Msa0322890 AT3G53570.4 32.432 148 72 6 106 229 300 443 4.35e-12 65.5
Msa0322890 AT3G53570.2 32.432 148 72 6 106 229 300 443 4.35e-12 65.5
Msa0322890 AT3G53570.3 32.432 148 72 6 106 229 286 429 4.88e-12 65.5
Msa0322890 AT3G53570.5 32.432 148 72 6 106 229 286 429 4.88e-12 65.5
Msa0322890 AT4G01595.1 50.980 51 25 0 123 173 20 70 4.41e-11 59.3

Find 70 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAATATGTGCAGAATTTA+TGG 0.082765 2_4:+26458129 Msa0322890:three_prime_UTR
AAGATATAGATTATAGAATT+AGG 0.151422 2_4:-26458088 None:intergenic
TTCTATAATCTATATCTTAA+TGG 0.208829 2_4:+26458093 Msa0322890:three_prime_UTR
ATGAGTTATTTAAAATATTC+AGG 0.233768 2_4:+26456395 Msa0322890:CDS
CGAGATCCAAGCAATATTTC+CGG 0.312083 2_4:-26456277 None:intergenic
CAGTGACAAGCGATTGTATC+TGG 0.313242 2_4:+26454020 Msa0322890:CDS
AGACATTTACTTACCTTAGA+TGG 0.323829 2_4:-26457010 None:intergenic
AGACCAGCTGGCTCAAGATT+TGG 0.324310 2_4:-26457121 None:intergenic
GGAAATGTTGATTTAAAATC+AGG 0.327943 2_4:-26456980 None:intergenic
CCCACTGACCAAACATCAAC+TGG 0.335027 2_4:-26456313 None:intergenic
CCTGGCCATGTATCTTCATT+TGG 0.339457 2_4:-26456944 None:intergenic
AAATTGAAGATCTGAGAAAA+TGG 0.341183 2_4:-26452662 None:intergenic
AGATATAGATTATAGAATTA+GGG 0.344155 2_4:-26458087 None:intergenic
GTTGAATCTGAAATATTTGT+AGG 0.346235 2_4:-26458334 None:intergenic
ATTTCCCAGGTGGCCATCTA+AGG 0.351155 2_4:+26456997 Msa0322890:CDS
GCTCCTGGCAGTAATTCTTT+TGG 0.360943 2_4:-26458025 None:intergenic
GAAGAAGATTCGACTTGAAC+AGG 0.377015 2_4:+26452919 Msa0322890:CDS
ATTCTACCCCAGTTGATGTT+TGG 0.400330 2_4:+26456305 Msa0322890:CDS
ATGGAGAGAAAGGTATATAA+AGG 0.409139 2_4:-26452643 None:intergenic
TCTTGCAATAATATACGTAT+TGG 0.409205 2_4:-26458458 None:intergenic
ATCTGAGAAAATGGAGAGAA+AGG 0.412177 2_4:-26452653 None:intergenic
ATTCCAGAGCATGCTTTGCT+TGG 0.422112 2_4:+26457996 Msa0322890:intron
TTGTGTGCATGACAGGTTGC+AGG 0.425605 2_4:+26453987 Msa0322890:intron
TTCATGCTCCACAGCGCTCC+TGG 0.444473 2_4:-26458040 None:intergenic
CTTAGATCTGAAGAAGCATA+TGG 0.456457 2_4:+26454059 Msa0322890:CDS
TTTAAATAACTCATCAATCT+CGG 0.469825 2_4:-26456386 None:intergenic
AACATACGGCGTCGTTTACA+AGG 0.470308 2_4:+26452862 Msa0322890:CDS
CCAGTTGATGTTTGGTCAGT+GGG 0.471352 2_4:+26456313 Msa0322890:CDS
TACACTGTGGTACCGAGCTC+CGG 0.471861 2_4:+26456258 Msa0322890:CDS
AATCGGCGACCTCTATTCCC+TGG 0.474228 2_4:+26456358 Msa0322890:CDS
AATCTATATCTTAATGGTAA+AGG 0.478212 2_4:+26458099 Msa0322890:three_prime_UTR
ATCGGCGACCTCTATTCCCT+GGG 0.499404 2_4:+26456359 Msa0322890:CDS
AAGTCTGAATGGCAATATAC+AGG 0.502485 2_4:+26458389 Msa0322890:three_prime_UTR
TACGAAAAGGTGGAGAAGAT+TGG 0.503558 2_4:+26452833 Msa0322890:CDS
ATCTCACGAATGGCGGTGCT+AGG 0.506207 2_4:-26452956 None:intergenic
TCAGGCAATGAAGTTACTCC+TGG 0.506307 2_4:-26456962 None:intergenic
CCCAGTTGATGTTTGGTCAG+TGG 0.508697 2_4:+26456312 Msa0322890:CDS
GATTTGGAACCACGGTTGCT+AGG 0.511473 2_4:-26457105 None:intergenic
CGAGCTCCGGAAATATTGCT+TGG 0.517006 2_4:+26456271 Msa0322890:CDS
TCATCAATCTCGGAATCCCC+AGG 0.521762 2_4:-26456376 None:intergenic
GTTCCAAATCTTGAGCCAGC+TGG 0.530061 2_4:+26457118 Msa0322890:CDS
GGGATGTATATTTGCAGAGA+TGG 0.536491 2_4:+26456333 Msa0322890:CDS
CCACCAAAAGAATTACTGCC+AGG 0.543217 2_4:+26458022 Msa0322890:CDS
CCAAATGAAGATACATGGCC+AGG 0.550637 2_4:+26456944 Msa0322890:CDS
TTAAGAAGATCAAGACCAGC+TGG 0.550908 2_4:-26457133 None:intergenic
TCGGAATCCCCAGGGAATAG+AGG 0.553263 2_4:-26456367 None:intergenic
CGACTTGAACAGGAAGATGA+AGG 0.558474 2_4:+26452929 Msa0322890:CDS
TATTTGCAGAGATGGCAAAT+CGG 0.561219 2_4:+26456341 Msa0322890:CDS
TGCAGCATAGGAACATCGTT+AGG 0.570773 2_4:+26452996 Msa0322890:CDS
AAGATTGGTGAAGGAACATA+CGG 0.575038 2_4:+26452848 Msa0322890:CDS
CAAGCAATATTTCCGGAGCT+CGG 0.578128 2_4:-26456270 None:intergenic
TCGAATCTTCTTCAACGCGA+TGG 0.583845 2_4:-26452909 None:intergenic
CGATGGTTTCATTCGTAACA+CGG 0.593784 2_4:-26452892 None:intergenic
CCACTGACCAAACATCAACT+GGG 0.597741 2_4:-26456312 None:intergenic
CTTACCTTAGATGGCCACCT+GGG 0.599601 2_4:-26457001 None:intergenic
CGGGAGAGAGAGATGAGTCT+CGG 0.613428 2_4:+26452598 Msa0322890:five_prime_UTR
TGCTTAAAGAAATGCAGCAT+AGG 0.616303 2_4:+26452984 Msa0322890:CDS
AAGCAGCGAAATCTCACGAA+TGG 0.622360 2_4:-26452966 None:intergenic
ACTTACCTTAGATGGCCACC+TGG 0.622989 2_4:-26457002 None:intergenic
CAGCGAAATCTCACGAATGG+CGG 0.633511 2_4:-26452963 None:intergenic
GTACACCAAATGAAGATACA+TGG 0.634052 2_4:+26456939 Msa0322890:CDS
AAGGTGGAGAAGATTGGTGA+AGG 0.638609 2_4:+26452839 Msa0322890:CDS
TTAAATCAACATTTCCCAGG+TGG 0.647469 2_4:+26456987 Msa0322890:CDS
CATCAATCTCGGAATCCCCA+GGG 0.652311 2_4:-26456375 None:intergenic
AATTACTGCCAGGAGCGCTG+TGG 0.660367 2_4:+26458032 Msa0322890:CDS
TTTGCAGGACCTAGCAACCG+TGG 0.665321 2_4:+26457096 Msa0322890:intron
TGGCTCAAGATTTGGAACCA+CGG 0.688247 2_4:-26457113 None:intergenic
CACTGACCAAACATCAACTG+GGG 0.711534 2_4:-26456311 None:intergenic
GTTTGTAGGTAGTTACACTG+TGG 0.718192 2_4:+26456245 Msa0322890:intron
TCGGCGACCTCTATTCCCTG+GGG 0.729622 2_4:+26456360 Msa0322890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTAATTATGAATATTAAG+AGG - chr2_4:26454819-26454838 None:intergenic 10.0%
!! TGTTAAATATATTTGAAAAA+CGG + chr2_4:26456810-26456829 Msa0322890:intron 10.0%
!!! TATCATTTATTTGATAATTA+AGG + chr2_4:26457496-26457515 Msa0322890:intron 10.0%
!!! TGATTTTAGTGTTATTTTTT+TGG + chr2_4:26453223-26453242 Msa0322890:intron 15.0%
!! TAAAATTTAGGAATTTAGTA+AGG - chr2_4:26453741-26453760 None:intergenic 15.0%
!! AATCATAGTACATAAAATTT+AGG - chr2_4:26453753-26453772 None:intergenic 15.0%
!! AAAATGAAACAGAAATAAAT+AGG + chr2_4:26455425-26455444 Msa0322890:intron 15.0%
!! AAATGAAACAGAAATAAATA+GGG + chr2_4:26455426-26455445 Msa0322890:intron 15.0%
!!! ATGAGTTATTTAAAATATTC+AGG + chr2_4:26456395-26456414 Msa0322890:CDS 15.0%
!!! TTTTGACTTTAATATTTACA+AGG + chr2_4:26456491-26456510 Msa0322890:intron 15.0%
!!! TTTGACTTTAATATTTACAA+GGG + chr2_4:26456492-26456511 Msa0322890:intron 15.0%
!!! TTGTTATTCTTATTTATAAG+TGG + chr2_4:26456553-26456572 Msa0322890:intron 15.0%
!! GTTAAAATATTAGAGTAATA+AGG - chr2_4:26457064-26457083 None:intergenic 15.0%
!!! GATGAAATATTATTTTTCTT+TGG + chr2_4:26457172-26457191 Msa0322890:intron 15.0%
!!! AGTTTATTTTGTTCTTAATT+AGG + chr2_4:26457301-26457320 Msa0322890:intron 15.0%
!! ATATATTGATAAATATTGGA+TGG + chr2_4:26457387-26457406 Msa0322890:intron 15.0%
!! TTTCTTAATAGAAATAACAA+GGG + chr2_4:26457525-26457544 Msa0322890:intron 15.0%
!! AGATATAGATTATAGAATTA+GGG - chr2_4:26458090-26458109 None:intergenic 15.0%
!! AAGATATAGATTATAGAATT+AGG - chr2_4:26458091-26458110 None:intergenic 15.0%
!! TTCTATAATCTATATCTTAA+TGG + chr2_4:26458093-26458112 Msa0322890:three_prime_UTR 15.0%
!! ATTTGTTTGACATAGTTAAT+TGG + chr2_4:26453084-26453103 Msa0322890:intron 20.0%
!!! AACATTCTGTATGTTTTTTT+AGG + chr2_4:26453400-26453419 Msa0322890:intron 20.0%
!! TAATTTAGCATACAAACAAT+GGG - chr2_4:26454782-26454801 None:intergenic 20.0%
!! ATAATTTAGCATACAAACAA+TGG - chr2_4:26454783-26454802 None:intergenic 20.0%
!! ATTGTTTGTATGCTAAATTA+TGG + chr2_4:26454782-26454801 Msa0322890:intron 20.0%
!! ATAAGAGAATAAAATAACAG+AGG + chr2_4:26455262-26455281 Msa0322890:intron 20.0%
!! GAAAAAAGAATCACAAATTA+TGG + chr2_4:26455330-26455349 Msa0322890:intron 20.0%
!! TTTAAATAACTCATCAATCT+CGG - chr2_4:26456389-26456408 None:intergenic 20.0%
!!! AACAAATTTTATATGTCAAC+TGG - chr2_4:26456794-26456813 None:intergenic 20.0%
!!! TTCTTTTTATGAAGAATCTT+GGG + chr2_4:26456917-26456936 Msa0322890:intron 20.0%
!!! TTATTTTGTTCTTAATTAGG+AGG + chr2_4:26457304-26457323 Msa0322890:intron 20.0%
!!! ATGGTACTTTTTTTTTTTGA+AGG + chr2_4:26457442-26457461 Msa0322890:intron 20.0%
!! GTTTCTTAATAGAAATAACA+AGG + chr2_4:26457524-26457543 Msa0322890:intron 20.0%
!!! CTATTTCATTATTTGATAAC+TGG - chr2_4:26457812-26457831 None:intergenic 20.0%
!! GAGGATTAAAATTAATACAT+GGG - chr2_4:26457837-26457856 None:intergenic 20.0%
!! AGAGGATTAAAATTAATACA+TGG - chr2_4:26457838-26457857 None:intergenic 20.0%
!! CAATTTCCATTAAATTTCTT+TGG + chr2_4:26457941-26457960 Msa0322890:intron 20.0%
!! AATCTATATCTTAATGGTAA+AGG + chr2_4:26458099-26458118 Msa0322890:three_prime_UTR 20.0%
!! GACAAAATATTAAATATGAC+AGG - chr2_4:26458315-26458334 None:intergenic 20.0%
! AGAAACCAAAAAGAAAACAA+CGG + chr2_4:26452578-26452597 Msa0322890:five_prime_UTR 25.0%
! AAATTGAAGATCTGAGAAAA+TGG - chr2_4:26452665-26452684 None:intergenic 25.0%
!! TATGTGAAGTTAATTTTCTG+CGG + chr2_4:26453155-26453174 Msa0322890:intron 25.0%
! TAAAATCATAGAGAACTTTC+CGG - chr2_4:26453211-26453230 None:intergenic 25.0%
!!! GTGTTATTTTTTTGGTGAAT+TGG + chr2_4:26453231-26453250 Msa0322890:intron 25.0%
! TAGAATCAAACTATCAAAAC+AGG - chr2_4:26453565-26453584 None:intergenic 25.0%
! GATTCTATTCAGTTAATGTT+TGG + chr2_4:26453578-26453597 Msa0322890:intron 25.0%
! GTAATTCAATCCTTTCTTTA+TGG - chr2_4:26453846-26453865 None:intergenic 25.0%
!! TGGTTTGGCAATAAATATTA+TGG + chr2_4:26454224-26454243 Msa0322890:intron 25.0%
! CATTGTCTAAATTAGATTTG+TGG - chr2_4:26454268-26454287 None:intergenic 25.0%
! ATTTGTATATACCTGCAATT+TGG - chr2_4:26454346-26454365 None:intergenic 25.0%
!!! ACAACTTGCTATATAAATAG+AGG - chr2_4:26454519-26454538 None:intergenic 25.0%
!! TTTGCTTATTTCTTTGGTTA+TGG + chr2_4:26454641-26454660 Msa0322890:intron 25.0%
! CTTTATTAACATTAATGACG+TGG - chr2_4:26454694-26454713 None:intergenic 25.0%
! CATACATAACTAAATACACA+TGG - chr2_4:26454723-26454742 None:intergenic 25.0%
! ACATAATTAGTGTACAGAAA+GGG + chr2_4:26455356-26455375 Msa0322890:intron 25.0%
! GAAAAAGGAAAAAGAGAAAA+TGG + chr2_4:26455388-26455407 Msa0322890:intron 25.0%
!! GTTGTCATTTAACAATGAAT+GGG + chr2_4:26455806-26455825 Msa0322890:intron 25.0%
! ATGCCAGATTATATAATGAT+GGG - chr2_4:26455892-26455911 None:intergenic 25.0%
! AATGCCAGATTATATAATGA+TGG - chr2_4:26455893-26455912 None:intergenic 25.0%
! GATAAATACATATGTTCTCT+AGG - chr2_4:26456100-26456119 None:intergenic 25.0%
! AAATAAACTAAGAGCAGATT+AGG + chr2_4:26456139-26456158 Msa0322890:intron 25.0%
! ACATATAAAATCTTGTGGAA+AGG + chr2_4:26456165-26456184 Msa0322890:intron 25.0%
!!! CAACTAATTGAATTTTGAGA+TGG + chr2_4:26456634-26456653 Msa0322890:intron 25.0%
! AACTGGAAAATCTAAATTCA+TGG - chr2_4:26456777-26456796 None:intergenic 25.0%
!! GTTCTTTTTATGAAGAATCT+TGG + chr2_4:26456916-26456935 Msa0322890:intron 25.0%
!!! GGAAATGTTGATTTAAAATC+AGG - chr2_4:26456983-26457002 None:intergenic 25.0%
!! ATTTTAAATCAACATTTCCC+AGG + chr2_4:26456984-26457003 Msa0322890:CDS 25.0%
! TGCTTCTAAATATATTTCTC+TGG - chr2_4:26457364-26457383 None:intergenic 25.0%
!!! TTTTTTGAAGGAAGAAAACA+TGG + chr2_4:26457454-26457473 Msa0322890:intron 25.0%
! TTCAATGCAAAAGCAATTAA+AGG + chr2_4:26457656-26457675 Msa0322890:intron 25.0%
! TCAATGCAAAAGCAATTAAA+GGG + chr2_4:26457657-26457676 Msa0322890:intron 25.0%
!! GTTGAATCTGAAATATTTGT+AGG - chr2_4:26458337-26458356 None:intergenic 25.0%
! TCTTGCAATAATATACGTAT+TGG - chr2_4:26458461-26458480 None:intergenic 25.0%
GAAACCAAAAAGAAAACAAC+GGG + chr2_4:26452579-26452598 Msa0322890:five_prime_UTR 30.0%
! ATGGAGAGAAAGGTATATAA+AGG - chr2_4:26452646-26452665 None:intergenic 30.0%
AGATGTTTGAATTTGTGTGT+TGG + chr2_4:26453179-26453198 Msa0322890:intron 30.0%
TTTGATGTCTAGTGTAATGT+TGG + chr2_4:26453263-26453282 Msa0322890:intron 30.0%
! GTATTCATTTTGTCGATGTT+TGG + chr2_4:26453481-26453500 Msa0322890:intron 30.0%
TCAGTTAATGTTTGGTAAAC+TGG + chr2_4:26453586-26453605 Msa0322890:intron 30.0%
! ACTGGTAGTGTTATTGATAA+AGG + chr2_4:26453604-26453623 Msa0322890:intron 30.0%
! CTGGTAGTGTTATTGATAAA+GGG + chr2_4:26453605-26453624 Msa0322890:intron 30.0%
!! GTTCTAAAGTACTCATTTGA+TGG + chr2_4:26453627-26453646 Msa0322890:intron 30.0%
GTGATCTTAAAATAACAGAG+AGG - chr2_4:26454157-26454176 None:intergenic 30.0%
GTCTAAATTAGATTTGTGGA+AGG - chr2_4:26454264-26454283 None:intergenic 30.0%
AATGATGATAAGCTTATGCT+TGG + chr2_4:26454301-26454320 Msa0322890:intron 30.0%
!! TTTAGTGGGTTACAGTTAAT+TGG + chr2_4:26454403-26454422 Msa0322890:intron 30.0%
!! TTGACCTATAGCATTTTGAT+TGG + chr2_4:26454487-26454506 Msa0322890:intron 30.0%
CAAAGAAATAAGCAAAGCAA+TGG - chr2_4:26454637-26454656 None:intergenic 30.0%
! CATTGCTTTGCTTATTTCTT+TGG + chr2_4:26454635-26454654 Msa0322890:intron 30.0%
CAAGCTTAAGTGAATTAGTA+CGG - chr2_4:26455022-26455041 None:intergenic 30.0%
GACATAATTAGTGTACAGAA+AGG + chr2_4:26455355-26455374 Msa0322890:intron 30.0%
AAGGAAAAAGAGAAAATGGA+TGG + chr2_4:26455392-26455411 Msa0322890:intron 30.0%
AAATAAATAGGGACAATGAG+AGG + chr2_4:26455437-26455456 Msa0322890:intron 30.0%
TCATTGTTAAATGACAACCA+TGG - chr2_4:26455804-26455823 None:intergenic 30.0%
! GGTTGTCATTTAACAATGAA+TGG + chr2_4:26455805-26455824 Msa0322890:intron 30.0%
TAACAATGAATGGGAAACAT+TGG + chr2_4:26455815-26455834 Msa0322890:intron 30.0%
AACAATGAATGGGAAACATT+GGG + chr2_4:26455816-26455835 Msa0322890:intron 30.0%
TTGCCCATCATTATATAATC+TGG + chr2_4:26455886-26455905 Msa0322890:intron 30.0%
! TATAATCTGGCATTGAAGAT+TGG + chr2_4:26455899-26455918 Msa0322890:intron 30.0%
GGAAATAAACTCAAGTCATT+TGG - chr2_4:26455959-26455978 None:intergenic 30.0%
TAGATACAAGAATTAGTGAG+GGG - chr2_4:26456029-26456048 None:intergenic 30.0%
CTAGATACAAGAATTAGTGA+GGG - chr2_4:26456030-26456049 None:intergenic 30.0%
TCTCTAGGTTACTAAAGTTT+GGG - chr2_4:26456085-26456104 None:intergenic 30.0%
TTCTCTAGGTTACTAAAGTT+TGG - chr2_4:26456086-26456105 None:intergenic 30.0%
GGAGTACATATAAAATCTTG+TGG + chr2_4:26456160-26456179 Msa0322890:intron 30.0%
! TGTCATTGATGATTGTTTGT+AGG + chr2_4:26456231-26456250 Msa0322890:intron 30.0%
! GTGAATATCTTTATTTCCGT+AGG + chr2_4:26456417-26456436 Msa0322890:intron 30.0%
ATAGCAAAGGAGTTCTTAAT+GGG + chr2_4:26456720-26456739 Msa0322890:intron 30.0%
TATTTGAAAAACGGTACCAT+AGG + chr2_4:26456819-26456838 Msa0322890:intron 30.0%
!!! AGCAAAGAGTATTTTTCCTA+TGG - chr2_4:26456838-26456857 None:intergenic 30.0%
AATACTCTTTGCTTTCTAAC+AGG + chr2_4:26456845-26456864 Msa0322890:intron 30.0%
ATACTCTTTGCTTTCTAACA+GGG + chr2_4:26456846-26456865 Msa0322890:intron 30.0%
AGACATTTACTTACCTTAGA+TGG - chr2_4:26457013-26457032 None:intergenic 30.0%
GATCACATCAATTCAGATTA+AGG - chr2_4:26457042-26457061 None:intergenic 30.0%
GTTTGTTTATCCCAATAACA+AGG - chr2_4:26457278-26457297 None:intergenic 30.0%
TTTCTAAGCTATGATCAGTA+AGG - chr2_4:26457420-26457439 None:intergenic 30.0%
TGATCATAGCTTAGAAAACA+TGG + chr2_4:26457423-26457442 Msa0322890:intron 30.0%
ACAAGTGTTCAAAAAAGACA+CGG - chr2_4:26457707-26457726 None:intergenic 30.0%
AGAGAAAAAAACTGATAGAG+AGG - chr2_4:26457856-26457875 None:intergenic 30.0%
TCAGCACCAAAGAAATTTAA+TGG - chr2_4:26457950-26457969 None:intergenic 30.0%
AGCAATATGTGCAGAATTTA+TGG + chr2_4:26458129-26458148 Msa0322890:three_prime_UTR 30.0%
!!! ATTTTGATTGTGCCAGAAAT+GGG + chr2_4:26458152-26458171 Msa0322890:three_prime_UTR 30.0%
AAAAATAACACACCCATTTC+TGG - chr2_4:26458167-26458186 None:intergenic 30.0%
ATCTGAGAAAATGGAGAGAA+AGG - chr2_4:26452656-26452675 None:intergenic 35.0%
!!! GTCATTTTTCTTCTTCACGA+TGG + chr2_4:26452717-26452736 Msa0322890:exon 35.0%
! TTCGATTTTGCAGTACGAAA+AGG + chr2_4:26452820-26452839 Msa0322890:intron 35.0%
AAGATTGGTGAAGGAACATA+CGG + chr2_4:26452848-26452867 Msa0322890:CDS 35.0%
TGCTTAAAGAAATGCAGCAT+AGG + chr2_4:26452984-26453003 Msa0322890:CDS 35.0%
CTAATCACACATATGCACAA+TGG - chr2_4:26453443-26453462 None:intergenic 35.0%
CAACCAATCCTTATCTTGTT+TGG + chr2_4:26453510-26453529 Msa0322890:intron 35.0%
! CAATCCTTATCTTGTTTGGT+GGG + chr2_4:26453514-26453533 Msa0322890:intron 35.0%
! AATCCTTATCTTGTTTGGTG+GGG + chr2_4:26453515-26453534 Msa0322890:intron 35.0%
!! ATGCTCTTTGTTGTTCATCA+AGG + chr2_4:26453655-26453674 Msa0322890:intron 35.0%
AGCTTGTATAACAGCTAAGA+GGG - chr2_4:26453784-26453803 None:intergenic 35.0%
AAGCTTGTATAACAGCTAAG+AGG - chr2_4:26453785-26453804 None:intergenic 35.0%
TGTTATACAAGCTTTCCCTA+AGG + chr2_4:26453791-26453810 Msa0322890:intron 35.0%
GCAACTTATGCCATAAAGAA+AGG + chr2_4:26453833-26453852 Msa0322890:intron 35.0%
AGCATATCTTGATAAGGGAA+TGG - chr2_4:26453961-26453980 None:intergenic 35.0%
TTCCCTTATCAAGATATGCT+TGG + chr2_4:26453961-26453980 Msa0322890:intron 35.0%
CACCAAGCATATCTTGATAA+GGG - chr2_4:26453966-26453985 None:intergenic 35.0%
!!! GTATCTGGTTTTTGAGTATC+TGG + chr2_4:26454035-26454054 Msa0322890:CDS 35.0%
! CTTAGATCTGAAGAAGCATA+TGG + chr2_4:26454059-26454078 Msa0322890:CDS 35.0%
! GAAAGAGTGTGCAAAAAATC+TGG + chr2_4:26454204-26454223 Msa0322890:intron 35.0%
AGTGTGCAAAAAATCTGGTT+TGG + chr2_4:26454209-26454228 Msa0322890:intron 35.0%
ATGCTTGGCAACAAATAGTT+TGG + chr2_4:26454316-26454335 Msa0322890:intron 35.0%
CATCATTTAGATCCAGAAAC+AGG - chr2_4:26454455-26454474 None:intergenic 35.0%
AGCTCCAATCAAAATGCTAT+AGG - chr2_4:26454494-26454513 None:intergenic 35.0%
TAGCATACAAACAATGGGAA+GGG - chr2_4:26454777-26454796 None:intergenic 35.0%
TTAGCATACAAACAATGGGA+AGG - chr2_4:26454778-26454797 None:intergenic 35.0%
AATTCAGACTCCAAACTAAC+TGG - chr2_4:26454885-26454904 None:intergenic 35.0%
TGATAAAGGAACATCTGCAA+AGG - chr2_4:26454918-26454937 None:intergenic 35.0%
TTCCTTTATCAAATGCTCTG+TGG + chr2_4:26454927-26454946 Msa0322890:intron 35.0%
! TTCCACAGAGCATTTGATAA+AGG - chr2_4:26454932-26454951 None:intergenic 35.0%
CGATCTATCAACAAATTCTG+TGG - chr2_4:26454999-26455018 None:intergenic 35.0%
TCATGTGTAAATGTTCTGAC+AGG - chr2_4:26455077-26455096 None:intergenic 35.0%
TGTCAGAACATTTACACATG+AGG + chr2_4:26455076-26455095 Msa0322890:intron 35.0%
AGCGACTAGAAGCAAATATA+AGG - chr2_4:26455113-26455132 None:intergenic 35.0%
CTATACTCCTTTCGTAAGTT+TGG - chr2_4:26455149-26455168 None:intergenic 35.0%
TCTCTAATTAGAGCAAGAGA+AGG - chr2_4:26455192-26455211 None:intergenic 35.0%
TTCTCTTGCTCTAATTAGAG+AGG + chr2_4:26455191-26455210 Msa0322890:intron 35.0%
AGAGGTGATAATAGAGAGAA+TGG + chr2_4:26455455-26455474 Msa0322890:intron 35.0%
ATCTGACAAACCCAAAACAA+AGG - chr2_4:26455763-26455782 None:intergenic 35.0%
AAATGACAACCATGGAAGAA+TGG - chr2_4:26455796-26455815 None:intergenic 35.0%
!! TAATGATGGGCAATGATACA+TGG - chr2_4:26455879-26455898 None:intergenic 35.0%
GCTAGATACAAGAATTAGTG+AGG - chr2_4:26456031-26456050 None:intergenic 35.0%
CTCTAGGTTACTAAAGTTTG+GGG - chr2_4:26456084-26456103 None:intergenic 35.0%
!! TGGAAAGGTGTTATTGAAGA+TGG + chr2_4:26456180-26456199 Msa0322890:intron 35.0%
TATTTGCAGAGATGGCAAAT+CGG + chr2_4:26456341-26456360 Msa0322890:CDS 35.0%
TCCATGTTGATACCATTTGA+TGG + chr2_4:26456585-26456604 Msa0322890:intron 35.0%
TCCATCAAATGGTATCAACA+TGG - chr2_4:26456589-26456608 None:intergenic 35.0%
AAAGGATCATGTCCATCAAA+TGG - chr2_4:26456600-26456619 None:intergenic 35.0%
GTTGTGAAACTAGCATTCAA+AGG - chr2_4:26456618-26456637 None:intergenic 35.0%
AGAAAGGCTAAACTAAAGCA+GGG - chr2_4:26456683-26456702 None:intergenic 35.0%
CATTTCAGTCAGTAAGAGAA+AGG - chr2_4:26456699-26456718 None:intergenic 35.0%
! CTTTCTCTTACTGACTGAAA+TGG + chr2_4:26456697-26456716 Msa0322890:intron 35.0%
GATAGCAAAGGAGTTCTTAA+TGG + chr2_4:26456719-26456738 Msa0322890:intron 35.0%
TAGCAAAGGAGTTCTTAATG+GGG + chr2_4:26456721-26456740 Msa0322890:intron 35.0%
GTACACCAAATGAAGATACA+TGG + chr2_4:26456939-26456958 Msa0322890:CDS 35.0%
TTAAATCAACATTTCCCAGG+TGG + chr2_4:26456987-26457006 Msa0322890:CDS 35.0%
AACCTTATCTTGAACTTTGC+AGG + chr2_4:26457081-26457100 Msa0322890:intron 35.0%
AATAACAAGGATTCAGACTG+AGG - chr2_4:26457265-26457284 None:intergenic 35.0%
! TCAGTCTGAATCCTTGTTAT+TGG + chr2_4:26457264-26457283 Msa0322890:intron 35.0%
!! CAGTCTGAATCCTTGTTATT+GGG + chr2_4:26457265-26457284 Msa0322890:intron 35.0%
!!! TCTTTTTTTGGTGATTGACG+TGG + chr2_4:26457582-26457601 Msa0322890:intron 35.0%
!!! GATTTTGATTGTGCCAGAAA+TGG + chr2_4:26458151-26458170 Msa0322890:three_prime_UTR 35.0%
TCAGACTTGCACAAAAAAGA+AGG - chr2_4:26458377-26458396 None:intergenic 35.0%
!!! CTTTTTTGTGCAAGTCTGAA+TGG + chr2_4:26458378-26458397 Msa0322890:three_prime_UTR 35.0%
AAGTCTGAATGGCAATATAC+AGG + chr2_4:26458389-26458408 Msa0322890:three_prime_UTR 35.0%
!! CTCTCCCGTTGTTTTCTTTT+TGG - chr2_4:26452586-26452605 None:intergenic 40.0%
! GATTTTGCAGTACGAAAAGG+TGG + chr2_4:26452823-26452842 Msa0322890:intron 40.0%
TACGAAAAGGTGGAGAAGAT+TGG + chr2_4:26452833-26452852 Msa0322890:CDS 40.0%
CGATGGTTTCATTCGTAACA+CGG - chr2_4:26452895-26452914 None:intergenic 40.0%
! GAAGAAGATTCGACTTGAAC+AGG + chr2_4:26452919-26452938 Msa0322890:CDS 40.0%
! ATTTGTGTGTTGGTCTGAAC+CGG + chr2_4:26453189-26453208 Msa0322890:intron 40.0%
ATCACACATATGCACAATGG+CGG - chr2_4:26453440-26453459 None:intergenic 40.0%
!!! ATTTTGTCGATGTTTGGTGC+CGG + chr2_4:26453487-26453506 Msa0322890:intron 40.0%
!! ACAAGATAAGGATTGGTTGC+CGG - chr2_4:26453509-26453528 None:intergenic 40.0%
CCACCAAACAAGATAAGGAT+TGG - chr2_4:26453516-26453535 None:intergenic 40.0%
! CCAATCCTTATCTTGTTTGG+TGG + chr2_4:26453513-26453532 Msa0322890:intron 40.0%
CATCAAGGTGAGATGATTGT+AGG + chr2_4:26453670-26453689 Msa0322890:intron 40.0%
CACAGCAAAAACATGCCTTA+GGG - chr2_4:26453809-26453828 None:intergenic 40.0%
ACACAGCAAAAACATGCCTT+AGG - chr2_4:26453810-26453829 None:intergenic 40.0%
CCACCAAGCATATCTTGATA+AGG - chr2_4:26453967-26453986 None:intergenic 40.0%
CCTTATCAAGATATGCTTGG+TGG + chr2_4:26453964-26453983 Msa0322890:intron 40.0%
! CGCGGATCTTTTATAAACTC+AGG - chr2_4:26454093-26454112 None:intergenic 40.0%
!! TCACTCACTTTTACTTGTCG+CGG - chr2_4:26454111-26454130 None:intergenic 40.0%
TGACGAATTGCAGAGTTTAG+TGG + chr2_4:26454388-26454407 Msa0322890:intron 40.0%
GACGAATTGCAGAGTTTAGT+GGG + chr2_4:26454389-26454408 Msa0322890:intron 40.0%
CCAGAAACAGGAAGATTATC+AGG - chr2_4:26454443-26454462 None:intergenic 40.0%
CCTGATAATCTTCCTGTTTC+TGG + chr2_4:26454440-26454459 Msa0322890:intron 40.0%
!! GTCGACTTGAACAAACACAA+TGG - chr2_4:26454578-26454597 None:intergenic 40.0%
GTGAACTTGACCAGTTAGTT+TGG + chr2_4:26454872-26454891 Msa0322890:intron 40.0%
!!! TCACTTAAGCTTGCCGATTT+TGG + chr2_4:26455029-26455048 Msa0322890:intron 40.0%
!!! TAAGCTTGCCGATTTTGGAT+TGG + chr2_4:26455034-26455053 Msa0322890:intron 40.0%
CGTAACACCAAACTTACGAA+AGG + chr2_4:26455139-26455158 Msa0322890:intron 40.0%
TTAGTGTACAGAAAGGGATG+AGG + chr2_4:26455362-26455381 Msa0322890:intron 40.0%
AAAGGGATGAGGTCAGAAAA+AGG + chr2_4:26455373-26455392 Msa0322890:intron 40.0%
GGTGATAATAGAGAGAATGG+AGG + chr2_4:26455458-26455477 Msa0322890:intron 40.0%
GGGAGTAACCAAATGAGTTA+CGG + chr2_4:26455541-26455560 Msa0322890:intron 40.0%
AGTAACCAAATGAGTTACGG+AGG + chr2_4:26455544-26455563 Msa0322890:intron 40.0%
GTTTCAAACTCTCGTGTCAT+GGG + chr2_4:26455588-26455607 Msa0322890:intron 40.0%
AGAGAGCTGGATTCAATTGA+TGG - chr2_4:26455620-26455639 None:intergenic 40.0%
AACAGAAAGAGAAAGAGAGC+TGG - chr2_4:26455633-26455652 None:intergenic 40.0%
GGAAATGGTTGAGAAACCAA+GGG - chr2_4:26455664-26455683 None:intergenic 40.0%
!!! CACAGCATAGCCTTTGTTTT+GGG + chr2_4:26455750-26455769 Msa0322890:intron 40.0%
ACAACCATGGAAGAATGGAA+TGG - chr2_4:26455791-26455810 None:intergenic 40.0%
! TCGTTGGTCACTTTCATATC+AGG + chr2_4:26455851-26455870 Msa0322890:intron 40.0%
AGCAATGAAGGATCACTACT+AGG - chr2_4:26455980-26455999 None:intergenic 40.0%
AGTAGTGATCCTTCATTGCT+AGG + chr2_4:26455980-26455999 Msa0322890:intron 40.0%
GTAGTGATCCTTCATTGCTA+GGG + chr2_4:26455981-26456000 Msa0322890:intron 40.0%
GTTTGTAGGTAGTTACACTG+TGG + chr2_4:26456245-26456264 Msa0322890:intron 40.0%
CGAGATCCAAGCAATATTTC+CGG - chr2_4:26456280-26456299 None:intergenic 40.0%
! ATTCTACCCCAGTTGATGTT+TGG + chr2_4:26456305-26456324 Msa0322890:CDS 40.0%
GGGATGTATATTTGCAGAGA+TGG + chr2_4:26456333-26456352 Msa0322890:CDS 40.0%
! ACCAAGAAGTACAAGTCCTA+CGG - chr2_4:26456436-26456455 None:intergenic 40.0%
CAGGGGAAATAGCAAAAAGA+AGG - chr2_4:26456665-26456684 None:intergenic 40.0%
GAAAGGCTAAACTAAAGCAG+GGG - chr2_4:26456682-26456701 None:intergenic 40.0%
GAGAAAGGCTAAACTAAAGC+AGG - chr2_4:26456684-26456703 None:intergenic 40.0%
CTGACTGAAATGGATAGCAA+AGG + chr2_4:26456707-26456726 Msa0322890:intron 40.0%
GTCCTGCAAAGTTCAAGATA+AGG - chr2_4:26457086-26457105 None:intergenic 40.0%
TTAAGAAGATCAAGACCAGC+TGG - chr2_4:26457136-26457155 None:intergenic 40.0%
GTTTATACCTCGATTGTTGC+CGG + chr2_4:26457219-26457238 Msa0322890:intron 40.0%
CAAAAAAGACACGGCAATTG+AGG - chr2_4:26457698-26457717 None:intergenic 40.0%
CTAATTATCCCACCATACAG+AGG - chr2_4:26457767-26457786 None:intergenic 40.0%
! CTGGCAGTAATTCTTTTGGT+GGG - chr2_4:26458024-26458043 None:intergenic 40.0%
! GCTACTTTCTTCAAAGACCT+AGG + chr2_4:26458187-26458206 Msa0322890:three_prime_UTR 40.0%
AAGGTGGAGAAGATTGGTGA+AGG + chr2_4:26452839-26452858 Msa0322890:CDS 45.0%
AACATACGGCGTCGTTTACA+AGG + chr2_4:26452862-26452881 Msa0322890:CDS 45.0%
TCGAATCTTCTTCAACGCGA+TGG - chr2_4:26452912-26452931 None:intergenic 45.0%
CGACTTGAACAGGAAGATGA+AGG + chr2_4:26452929-26452948 Msa0322890:CDS 45.0%
AAGCAGCGAAATCTCACGAA+TGG - chr2_4:26452969-26452988 None:intergenic 45.0%
TGCAGCATAGGAACATCGTT+AGG + chr2_4:26452996-26453015 Msa0322890:CDS 45.0%
CAACCCCACCAAACAAGATA+AGG - chr2_4:26453521-26453540 None:intergenic 45.0%
! CTTATCTTGTTTGGTGGGGT+TGG + chr2_4:26453519-26453538 Msa0322890:intron 45.0%
CAGTGACAAGCGATTGTATC+TGG + chr2_4:26454020-26454039 Msa0322890:CDS 45.0%
!! AGTTTGGCTTGCCAAATTGC+AGG + chr2_4:26454332-26454351 Msa0322890:intron 45.0%
GTGTTTGTTCAAGTCGACGT+AGG + chr2_4:26454580-26454599 Msa0322890:intron 45.0%
TTGTTCAAGTCGACGTAGGA+TGG + chr2_4:26454584-26454603 Msa0322890:intron 45.0%
AGTTGAGCAGGCGATATGAA+GGG - chr2_4:26454670-26454689 None:intergenic 45.0%
AAGCAAAGGAAAGGAGTGGT+AGG - chr2_4:26454754-26454773 None:intergenic 45.0%
AACAATGGGAAGGGAAGCAA+AGG - chr2_4:26454768-26454787 None:intergenic 45.0%
GCTCTAATTAGAGAGGAGTC+AGG + chr2_4:26455198-26455217 Msa0322890:intron 45.0%
CAGAGGTAAAAGACGACACA+TGG + chr2_4:26455279-26455298 Msa0322890:intron 45.0%
GACGACACATGGAAACAAGA+AGG + chr2_4:26455290-26455309 Msa0322890:intron 45.0%
AGGAACGACCTGAATGGAAA+TGG + chr2_4:26455520-26455539 Msa0322890:intron 45.0%
GGAACGACCTGAATGGAAAT+GGG + chr2_4:26455521-26455540 Msa0322890:intron 45.0%
GGTTACTCCCATTTCCATTC+AGG - chr2_4:26455531-26455550 None:intergenic 45.0%
! TTTGAAACCCAGAAGCACAG+AGG - chr2_4:26455576-26455595 None:intergenic 45.0%
GGTTTCAAACTCTCGTGTCA+TGG + chr2_4:26455587-26455606 Msa0322890:intron 45.0%
ATGGTTGAGAAACCAAGGGA+GGG - chr2_4:26455660-26455679 None:intergenic 45.0%
AATGGTTGAGAAACCAAGGG+AGG - chr2_4:26455661-26455680 None:intergenic 45.0%
GGGAAATGGTTGAGAAACCA+AGG - chr2_4:26455665-26455684 None:intergenic 45.0%
ATTTCCCTGAGTTGTGCCTT+GGG + chr2_4:26455678-26455697 Msa0322890:intron 45.0%
! TGGTTTTCATGTGGAGGTCA+TGG - chr2_4:26455724-26455743 None:intergenic 45.0%
CCAAAACAAAGGCTATGCTG+TGG - chr2_4:26455752-26455771 None:intergenic 45.0%
!! CCACAGCATAGCCTTTGTTT+TGG + chr2_4:26455749-26455768 Msa0322890:intron 45.0%
TGGGAATGCTGAATGATCGT+TGG + chr2_4:26455835-26455854 Msa0322890:intron 45.0%
ACAGATGACCCTAGCAATGA+AGG - chr2_4:26455992-26456011 None:intergenic 45.0%
ATCTAGCCTCAACCTTTGCA+CGG + chr2_4:26456044-26456063 Msa0322890:intron 45.0%
! GTTACTAAAGTTTGGGGCAG+GGG - chr2_4:26456078-26456097 None:intergenic 45.0%
! GGTTACTAAAGTTTGGGGCA+GGG - chr2_4:26456079-26456098 None:intergenic 45.0%
! AGGTTACTAAAGTTTGGGGC+AGG - chr2_4:26456080-26456099 None:intergenic 45.0%
CAAGCAATATTTCCGGAGCT+CGG - chr2_4:26456273-26456292 None:intergenic 45.0%
CACTGACCAAACATCAACTG+GGG - chr2_4:26456314-26456333 None:intergenic 45.0%
CCACTGACCAAACATCAACT+GGG - chr2_4:26456315-26456334 None:intergenic 45.0%
! CCAGTTGATGTTTGGTCAGT+GGG + chr2_4:26456313-26456332 Msa0322890:CDS 45.0%
TCCGTAGGACTTGTACTTCT+TGG + chr2_4:26456432-26456451 Msa0322890:intron 45.0%
CCTGGCCATGTATCTTCATT+TGG - chr2_4:26456947-26456966 None:intergenic 45.0%
CCAAATGAAGATACATGGCC+AGG + chr2_4:26456944-26456963 Msa0322890:CDS 45.0%
TCAGGCAATGAAGTTACTCC+TGG - chr2_4:26456965-26456984 None:intergenic 45.0%
! TGGCTCAAGATTTGGAACCA+CGG - chr2_4:26457116-26457135 None:intergenic 45.0%
TGGTTTACGCATCCTCTGTA+TGG + chr2_4:26457752-26457771 Msa0322890:intron 45.0%
TTTACGCATCCTCTGTATGG+TGG + chr2_4:26457755-26457774 Msa0322890:intron 45.0%
TTACGCATCCTCTGTATGGT+GGG + chr2_4:26457756-26457775 Msa0322890:intron 45.0%
ATTCCAGAGCATGCTTTGCT+TGG + chr2_4:26457996-26458015 Msa0322890:intron 45.0%
! CCTGGCAGTAATTCTTTTGG+TGG - chr2_4:26458025-26458044 None:intergenic 45.0%
CCACCAAAAGAATTACTGCC+AGG + chr2_4:26458022-26458041 Msa0322890:CDS 45.0%
! GCTCCTGGCAGTAATTCTTT+TGG - chr2_4:26458028-26458047 None:intergenic 45.0%
!! AAAAATATATTGATAAATAT+TGG + chr2_4:26457383-26457402 Msa0322890:intron 5.0%
CAGCGAAATCTCACGAATGG+CGG - chr2_4:26452966-26452985 None:intergenic 50.0%
! TTGGTGGTTGTGTGCATGAC+AGG + chr2_4:26453980-26453999 Msa0322890:intron 50.0%
TTGTGTGCATGACAGGTTGC+AGG + chr2_4:26453987-26454006 Msa0322890:intron 50.0%
CAGTTGAGCAGGCGATATGA+AGG - chr2_4:26454671-26454690 None:intergenic 50.0%
TAATGACGTGGCAGTTGAGC+AGG - chr2_4:26454682-26454701 None:intergenic 50.0%
AGGGAAGCAAAGGAAAGGAG+TGG - chr2_4:26454758-26454777 None:intergenic 50.0%
TGGGAAGGGAAGCAAAGGAA+AGG - chr2_4:26454763-26454782 None:intergenic 50.0%
!!! TTGCCGATTTTGGATTGGCC+AGG + chr2_4:26455039-26455058 Msa0322890:intron 50.0%
!!! TGCCGATTTTGGATTGGCCA+GGG + chr2_4:26455040-26455059 Msa0322890:intron 50.0%
TGCCCTGGCCAATCCAAAAT+CGG - chr2_4:26455045-26455064 None:intergenic 50.0%
!! TTTGGATTGGCCAGGGCATT+TGG + chr2_4:26455047-26455066 Msa0322890:intron 50.0%
GACAGGAATACCAAATGCCC+TGG - chr2_4:26455060-26455079 None:intergenic 50.0%
AGAATGGAGGTTGCCAGAGA+TGG + chr2_4:26455471-26455490 Msa0322890:intron 50.0%
GAATGGAGGTTGCCAGAGAT+GGG + chr2_4:26455472-26455491 Msa0322890:intron 50.0%
TGGATGAGGAACGACCTGAA+TGG + chr2_4:26455514-26455533 Msa0322890:intron 50.0%
TGGTTGAGAAACCAAGGGAG+GGG - chr2_4:26455659-26455678 None:intergenic 50.0%
CAAGGCACAACTCAGGGAAA+TGG - chr2_4:26455679-26455698 None:intergenic 50.0%
CATTTCCCTGAGTTGTGCCT+TGG + chr2_4:26455677-26455696 Msa0322890:intron 50.0%
TGCCTTGGGTACCATGAGAA+TGG + chr2_4:26455692-26455711 Msa0322890:intron 50.0%
CACCATTCTCATGGTACCCA+AGG - chr2_4:26455697-26455716 None:intergenic 50.0%
CTTGGGTACCATGAGAATGG+TGG + chr2_4:26455695-26455714 Msa0322890:intron 50.0%
CATGGAAGCCACCATTCTCA+TGG - chr2_4:26455706-26455725 None:intergenic 50.0%
! GCATGGTGGTTTTCATGTGG+AGG - chr2_4:26455730-26455749 None:intergenic 50.0%
! GTGGCATGGTGGTTTTCATG+TGG - chr2_4:26455733-26455752 None:intergenic 50.0%
ACAAAGGCTATGCTGTGGCA+TGG - chr2_4:26455747-26455766 None:intergenic 50.0%
TGCGCCATTCCATTCTTCCA+TGG + chr2_4:26455784-26455803 Msa0322890:intron 50.0%
TCTAGCCTCAACCTTTGCAC+GGG + chr2_4:26456045-26456064 Msa0322890:intron 50.0%
! GTTTTCCCGTGCAAAGGTTG+AGG - chr2_4:26456053-26456072 None:intergenic 50.0%
CGAGCTCCGGAAATATTGCT+TGG + chr2_4:26456271-26456290 Msa0322890:CDS 50.0%
! CCCAGTTGATGTTTGGTCAG+TGG + chr2_4:26456312-26456331 Msa0322890:CDS 50.0%
CCCACTGACCAAACATCAAC+TGG - chr2_4:26456316-26456335 None:intergenic 50.0%
CATCAATCTCGGAATCCCCA+GGG - chr2_4:26456378-26456397 None:intergenic 50.0%
TCATCAATCTCGGAATCCCC+AGG - chr2_4:26456379-26456398 None:intergenic 50.0%
ATTTCCCAGGTGGCCATCTA+AGG + chr2_4:26456997-26457016 Msa0322890:CDS 50.0%
CTTACCTTAGATGGCCACCT+GGG - chr2_4:26457004-26457023 None:intergenic 50.0%
ACTTACCTTAGATGGCCACC+TGG - chr2_4:26457005-26457024 None:intergenic 50.0%
! GATTTGGAACCACGGTTGCT+AGG - chr2_4:26457108-26457127 None:intergenic 50.0%
GTTCCAAATCTTGAGCCAGC+TGG + chr2_4:26457118-26457137 Msa0322890:CDS 50.0%
! AGACCAGCTGGCTCAAGATT+TGG - chr2_4:26457124-26457143 None:intergenic 50.0%
!! GTTGCCGGCTTCAGTATCTT+AGG + chr2_4:26457234-26457253 Msa0322890:intron 50.0%
CCAGCCTAAGATACTGAAGC+CGG - chr2_4:26457241-26457260 None:intergenic 50.0%
CGGCTTCAGTATCTTAGGCT+GGG + chr2_4:26457239-26457258 Msa0322890:intron 50.0%
CCAGCTTGAGATGCAGAAGA+GGG - chr2_4:26457735-26457754 None:intergenic 50.0%
ACCAGCTTGAGATGCAGAAG+AGG - chr2_4:26457736-26457755 None:intergenic 50.0%
GATCCAAGCAAAGCATGCTC+TGG - chr2_4:26458002-26458021 None:intergenic 50.0%
CGGGAGAGAGAGATGAGTCT+CGG + chr2_4:26452598-26452617 Msa0322890:five_prime_UTR 55.0%
ATCTCACGAATGGCGGTGCT+AGG - chr2_4:26452959-26452978 None:intergenic 55.0%
CAGTGGCAACATCCCATCTC+TGG - chr2_4:26455487-26455506 None:intergenic 55.0%
AGATGGGATGTTGCCACTGC+TGG + chr2_4:26455488-26455507 Msa0322890:intron 55.0%
GATGTTGCCACTGCTGGAGA+TGG + chr2_4:26455494-26455513 Msa0322890:intron 55.0%
TCCTCATCCATCTCCAGCAG+TGG - chr2_4:26455504-26455523 None:intergenic 55.0%
CTCGGCCTCCGTAACTCATT+TGG - chr2_4:26455552-26455571 None:intergenic 55.0%
! ACCCAGAAGCACAGAGGACT+CGG - chr2_4:26455570-26455589 None:intergenic 55.0%
TTGAGAAACCAAGGGAGGGG+GGG - chr2_4:26455656-26455675 None:intergenic 55.0%
GTTGAGAAACCAAGGGAGGG+GGG - chr2_4:26455657-26455676 None:intergenic 55.0%
GGTTGAGAAACCAAGGGAGG+GGG - chr2_4:26455658-26455677 None:intergenic 55.0%
GGTACCCAAGGCACAACTCA+GGG - chr2_4:26455685-26455704 None:intergenic 55.0%
TGGTACCCAAGGCACAACTC+AGG - chr2_4:26455686-26455705 None:intergenic 55.0%
AAGGCTATGCTGTGGCATGG+TGG - chr2_4:26455744-26455763 None:intergenic 55.0%
! ACTAAAGTTTGGGGCAGGGG+AGG - chr2_4:26456075-26456094 None:intergenic 55.0%
! TACACTGTGGTACCGAGCTC+CGG + chr2_4:26456258-26456277 Msa0322890:CDS 55.0%
AATCGGCGACCTCTATTCCC+TGG + chr2_4:26456358-26456377 Msa0322890:CDS 55.0%
ATCGGCGACCTCTATTCCCT+GGG + chr2_4:26456359-26456378 Msa0322890:CDS 55.0%
TCGGAATCCCCAGGGAATAG+AGG - chr2_4:26456370-26456389 None:intergenic 55.0%
TTTGCAGGACCTAGCAACCG+TGG + chr2_4:26457096-26457115 Msa0322890:intron 55.0%
ACTGAAGCCGGCAACAATCG+AGG - chr2_4:26457229-26457248 None:intergenic 55.0%
CCGGCTTCAGTATCTTAGGC+TGG + chr2_4:26457238-26457257 Msa0322890:intron 55.0%
CCCTCTTCTGCATCTCAAGC+TGG + chr2_4:26457732-26457751 Msa0322890:intron 55.0%
!! AATTACTGCCAGGAGCGCTG+TGG + chr2_4:26458032-26458051 Msa0322890:CDS 55.0%
! GTTTGGTGGGGTTGGATGCG+TGG + chr2_4:26453527-26453546 Msa0322890:intron 60.0%
GCCACTGCTGGAGATGGATG+AGG + chr2_4:26455500-26455519 Msa0322890:intron 60.0%
GCCGAGTCCTCTGTGCTTCT+GGG + chr2_4:26455566-26455585 Msa0322890:intron 60.0%
TTTCTGTTCCCCCCCTCCCT+TGG + chr2_4:26455645-26455664 Msa0322890:intron 60.0%
! GGGGAGGTTTTCCCGTGCAA+AGG - chr2_4:26456059-26456078 None:intergenic 60.0%
TCGGCGACCTCTATTCCCTG+GGG + chr2_4:26456360-26456379 Msa0322890:CDS 60.0%
TTCATGCTCCACAGCGCTCC+TGG - chr2_4:26458043-26458062 None:intergenic 60.0%
GGCCGAGTCCTCTGTGCTTC+TGG + chr2_4:26455565-26455584 Msa0322890:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 26452576 26458496 26452576 ID=Msa0322890;Name=Msa0322890
chr2_4 mRNA 26452576 26458496 26452576 ID=Msa0322890-mRNA-1;Parent=Msa0322890;Name=Msa0322890-mRNA-1;_AED=0.11;_eAED=0.11;_QI=160|0.85|1|1|0.85|0.75|8|304|236
chr2_4 exon 26452576 26452744 26452576 ID=Msa0322890-mRNA-1:exon:9181;Parent=Msa0322890-mRNA-1
chr2_4 exon 26452833 26453017 26452833 ID=Msa0322890-mRNA-1:exon:9182;Parent=Msa0322890-mRNA-1
chr2_4 exon 26454002 26454122 26454002 ID=Msa0322890-mRNA-1:exon:9183;Parent=Msa0322890-mRNA-1
chr2_4 exon 26456253 26456416 26456253 ID=Msa0322890-mRNA-1:exon:9184;Parent=Msa0322890-mRNA-1
chr2_4 exon 26456931 26457018 26456931 ID=Msa0322890-mRNA-1:exon:9185;Parent=Msa0322890-mRNA-1
chr2_4 exon 26457103 26457156 26457103 ID=Msa0322890-mRNA-1:exon:9186;Parent=Msa0322890-mRNA-1
chr2_4 exon 26458003 26458210 26458003 ID=Msa0322890-mRNA-1:exon:9187;Parent=Msa0322890-mRNA-1
chr2_4 exon 26458311 26458496 26458311 ID=Msa0322890-mRNA-1:exon:9188;Parent=Msa0322890-mRNA-1
chr2_4 five_prime_UTR 26452576 26452735 26452576 ID=Msa0322890-mRNA-1:five_prime_utr;Parent=Msa0322890-mRNA-1
chr2_4 CDS 26452736 26452744 26452736 ID=Msa0322890-mRNA-1:cds;Parent=Msa0322890-mRNA-1
chr2_4 CDS 26452833 26453017 26452833 ID=Msa0322890-mRNA-1:cds;Parent=Msa0322890-mRNA-1
chr2_4 CDS 26454002 26454122 26454002 ID=Msa0322890-mRNA-1:cds;Parent=Msa0322890-mRNA-1
chr2_4 CDS 26456253 26456416 26456253 ID=Msa0322890-mRNA-1:cds;Parent=Msa0322890-mRNA-1
chr2_4 CDS 26456931 26457018 26456931 ID=Msa0322890-mRNA-1:cds;Parent=Msa0322890-mRNA-1
chr2_4 CDS 26457103 26457156 26457103 ID=Msa0322890-mRNA-1:cds;Parent=Msa0322890-mRNA-1
chr2_4 CDS 26458003 26458092 26458003 ID=Msa0322890-mRNA-1:cds;Parent=Msa0322890-mRNA-1
chr2_4 three_prime_UTR 26458093 26458210 26458093 ID=Msa0322890-mRNA-1:three_prime_utr;Parent=Msa0322890-mRNA-1
chr2_4 three_prime_UTR 26458311 26458496 26458311 ID=Msa0322890-mRNA-1:three_prime_utr;Parent=Msa0322890-mRNA-1
Gene Sequence

>Msa0322890

ATGGAGCAATACGAAAAGGTGGAGAAGATTGGTGAAGGAACATACGGCGTCGTTTACAAGGCACGTGACCGTGTTACGAATGAAACCATCGCGTTGAAGAAGATTCGACTTGAACAGGAAGATGAAGGTGTTCCTAGCACCGCCATTCGTGAGATTTCGCTGCTTAAAGAAATGCAGCATAGGAACATCGTTAGGTTGCAGGATGTAGTGCACAGTGACAAGCGATTGTATCTGGTTTTTGAGTATCTGGACTTAGATCTGAAGAAGCATATGGATTCATCTCCTGAGTTTATAAAAGATCCGCGACAAGTAAAAGTAGTTACACTGTGGTACCGAGCTCCGGAAATATTGCTTGGATCTCGTCATTATTCTACCCCAGTTGATGTTTGGTCAGTGGGATGTATATTTGCAGAGATGGCAAATCGGCGACCTCTATTCCCTGGGGATTCCGAGATTGATGAGTTATTTAAAATATTCAGAATCTTGGGTACACCAAATGAAGATACATGGCCAGGAGTAACTTCATTGCCTGATTTTAAATCAACATTTCCCAGGTGGCCATCTAAGGACCTAGCAACCGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTCTTAATAGCATGCTTTGCTTGGATCCCACCAAAAGAATTACTGCCAGGAGCGCTGTGGAGCATGAATATTTCAAAGACATTAAGTTTGTACCCTAA
Protein sequence

>Msa0322890

MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSDKRLYLVFEYLDLDLKKHMDSSPEFIKDPRQVKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMANRRPLFPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSTFPRWPSKDLATVVPNLEPAGLDLLNSMLCLDPTKRITARSAVEHEYFKDIKFVP*