Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1206830 | sp|Q8L7W2|NUDT8_ARATH | 59.392 | 362 | 131 | 5 | 9 | 354 | 2 | 363 | 1.50e-151 | 434 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1206830 | G7JHP2 | 98.319 | 357 | 6 | 0 | 1 | 357 | 1 | 357 | 0.0 | 731 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044180 | Msa1206830 | 0.823777 | 1.153552e-53 | -8.615850e-47 |
| Msa0064550 | Msa1206830 | 0.819713 | 1.005367e-52 | -8.615850e-47 |
| Msa0072830 | Msa1206830 | 0.808160 | 3.550334e-50 | -8.615850e-47 |
| Msa0072860 | Msa1206830 | 0.810239 | 1.272533e-50 | -8.615850e-47 |
| Msa0104360 | Msa1206830 | 0.807590 | 4.692203e-50 | -8.615850e-47 |
| Msa0104390 | Msa1206830 | 0.800366 | 1.490522e-48 | -8.615850e-47 |
| Msa0109490 | Msa1206830 | 0.801988 | 6.942198e-49 | -8.615850e-47 |
| Msa0116470 | Msa1206830 | 0.809327 | 1.998481e-50 | -8.615850e-47 |
| Msa0116510 | Msa1206830 | 0.821571 | 3.762573e-53 | -8.615850e-47 |
| Msa0604880 | Msa1206830 | 0.819474 | 1.139391e-52 | -8.615850e-47 |
| Msa0605250 | Msa1206830 | 0.825308 | 5.032705e-54 | -8.615850e-47 |
| Msa0610810 | Msa1206830 | 0.825106 | 5.616041e-54 | -8.615850e-47 |
| Msa0621780 | Msa1206830 | 0.800381 | 1.480119e-48 | -8.615850e-47 |
| Msa0622250 | Msa1206830 | 0.820232 | 7.648921e-53 | -8.615850e-47 |
| Msa0627050 | Msa1206830 | 0.833994 | 3.873168e-56 | -8.615850e-47 |
| Msa0650640 | Msa1206830 | 0.801739 | 7.811776e-49 | -8.615850e-47 |
| Msa0651310 | Msa1206830 | 0.810455 | 1.142808e-50 | -8.615850e-47 |
| Msa0665150 | Msa1206830 | 0.815550 | 8.730507e-52 | -8.615850e-47 |
| Msa0675010 | Msa1206830 | 0.814387 | 1.581325e-51 | -8.615850e-47 |
| Msa0685000 | Msa1206830 | 0.810455 | 1.142740e-50 | -8.615850e-47 |
| Msa0693400 | Msa1206830 | 0.818548 | 1.851005e-52 | -8.615850e-47 |
| Msa0713210 | Msa1206830 | 0.816172 | 6.340863e-52 | -8.615850e-47 |
| Msa0748330 | Msa1206830 | 0.813595 | 2.363463e-51 | -8.615850e-47 |
| Msa0754350 | Msa1206830 | 0.812785 | 3.560007e-51 | -8.615850e-47 |
| Msa0755090 | Msa1206830 | 0.813322 | 2.713689e-51 | -8.615850e-47 |
| Msa0775580 | Msa1206830 | 0.803216 | 3.874432e-49 | -8.615850e-47 |
| Msa0795710 | Msa1206830 | 0.802311 | 5.958296e-49 | -8.615850e-47 |
| Msa0797000 | Msa1206830 | 0.802568 | 5.274659e-49 | -8.615850e-47 |
| Msa0834460 | Msa1206830 | 0.803629 | 3.182801e-49 | -8.615850e-47 |
| Msa0154240 | Msa1206830 | 0.845660 | 3.534788e-59 | -8.615850e-47 |
| Msa0154270 | Msa1206830 | 0.825704 | 4.054480e-54 | -8.615850e-47 |
| Msa0173370 | Msa1206830 | 0.811832 | 5.746938e-51 | -8.615850e-47 |
| Msa0202740 | Msa1206830 | 0.809951 | 1.468170e-50 | -8.615850e-47 |
| Msa0392050 | Msa1206830 | 0.828835 | 7.206147e-55 | -8.615850e-47 |
| Msa0401340 | Msa1206830 | 0.805946 | 1.044169e-49 | -8.615850e-47 |
| Msa0404690 | Msa1206830 | 0.811806 | 5.823747e-51 | -8.615850e-47 |
| Msa0448120 | Msa1206830 | 0.825909 | 3.623603e-54 | -8.615850e-47 |
| Msa0469950 | Msa1206830 | 0.829102 | 6.210634e-55 | -8.615850e-47 |
| Msa0984000 | Msa1206830 | 0.847489 | 1.119867e-59 | -8.615850e-47 |
| Msa1076520 | Msa1206830 | 0.808109 | 3.639464e-50 | -8.615850e-47 |
| Msa1082150 | Msa1206830 | 0.811317 | 7.437295e-51 | -8.615850e-47 |
| Msa0344680 | Msa1206830 | 0.827845 | 1.249422e-54 | -8.615850e-47 |
| Msa1138450 | Msa1206830 | 0.813840 | 2.087353e-51 | -8.615850e-47 |
| Msa1144730 | Msa1206830 | 0.828081 | 1.096320e-54 | -8.615850e-47 |
| Msa1173380 | Msa1206830 | 0.819209 | 1.309772e-52 | -8.615850e-47 |
| Msa1182800 | Msa1206830 | 0.846618 | 1.939144e-59 | -8.615850e-47 |
| Msa1182830 | Msa1206830 | 0.838863 | 2.232921e-57 | -8.615850e-47 |
| Msa1193400 | Msa1206830 | 0.821129 | 4.757419e-53 | -8.615850e-47 |
| Msa1193430 | Msa1206830 | 0.815932 | 7.174349e-52 | -8.615850e-47 |
| Msa1206760 | Msa1206830 | 0.906464 | 1.443706e-80 | -8.615850e-47 |
| Msa1206830 | Msa1219370 | 0.825547 | 4.418009e-54 | -8.615850e-47 |
| Msa1206830 | Msa1243730 | 0.822490 | 2.303621e-53 | -8.615850e-47 |
| Msa1206830 | Msa1257100 | 0.939748 | 7.537041e-100 | -8.615850e-47 |
| Msa1206830 | Msa1266840 | 0.824057 | 9.921074e-54 | -8.615850e-47 |
| Msa1206830 | Msa1272950 | 0.831007 | 2.130000e-55 | -8.615850e-47 |
| Msa1206830 | Msa1349810 | 0.856638 | 2.810773e-62 | -8.615850e-47 |
| Msa1206830 | Msa1358340 | 0.827819 | 1.267600e-54 | -8.615850e-47 |
| Msa1206830 | Msa1394900 | 0.801819 | 7.519749e-49 | -8.615850e-47 |
| Msa1206830 | Msa1395750 | 0.826603 | 2.477962e-54 | -8.615850e-47 |
| Msa1206830 | Msa1406990 | 0.940475 | 2.189831e-100 | -8.615850e-47 |
| Msa1206830 | Msa1443550 | 0.826582 | 2.506387e-54 | -8.615850e-47 |
| Msa0525270 | Msa1206830 | 0.805955 | 1.039440e-49 | -8.615850e-47 |
| Msa0525280 | Msa1206830 | 0.805027 | 1.627108e-49 | -8.615850e-47 |
| Msa0530340 | Msa1206830 | 0.813575 | 2.387608e-51 | -8.615850e-47 |
| Msa0549540 | Msa1206830 | 0.802519 | 5.399553e-49 | -8.615850e-47 |
| Msa0556070 | Msa1206830 | 0.825398 | 4.791739e-54 | -8.615850e-47 |
| Msa0570680 | Msa1206830 | 0.802135 | 6.477388e-49 | -8.615850e-47 |
| Msa0577050 | Msa1206830 | 0.821036 | 4.998297e-53 | -8.615850e-47 |
| Msa0580540 | Msa1206830 | 0.801702 | 7.950011e-49 | -8.615850e-47 |
| Msa0587290 | Msa1206830 | 0.830389 | 3.019009e-55 | -8.615850e-47 |
| Msa0853500 | Msa1206830 | 0.811656 | 6.278366e-51 | -8.615850e-47 |
| Msa0871470 | Msa1206830 | 0.807530 | 4.831902e-50 | -8.615850e-47 |
| Msa0904630 | Msa1206830 | 0.848014 | 8.027579e-60 | -8.615850e-47 |
| Msa0936650 | Msa1206830 | 0.834847 | 2.364936e-56 | -8.615850e-47 |
| Msa0936690 | Msa1206830 | 0.811241 | 7.724168e-51 | -8.615850e-47 |
| Msa0968780 | Msa1206830 | 0.800782 | 1.226471e-48 | -8.615850e-47 |
| Msa0973890 | Msa1206830 | 0.801000 | 1.106723e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1206830 | MtrunA17_Chr4g0055811 | 98.319 | 357 | 6 | 0 | 1 | 357 | 1 | 357 | 0.0 | 731 |
| Msa1206830 | MtrunA17_Chr2g0290501 | 47.122 | 278 | 146 | 1 | 76 | 353 | 56 | 332 | 3.50e-92 | 279 |
| Msa1206830 | MtrunA17_Chr3g0102431 | 50.775 | 258 | 126 | 1 | 91 | 348 | 25 | 281 | 3.84e-89 | 269 |
| Msa1206830 | MtrunA17_Chr3g0120821 | 44.218 | 294 | 140 | 4 | 37 | 328 | 45 | 316 | 2.37e-86 | 264 |
| Msa1206830 | MtrunA17_Chr4g0076351 | 48.235 | 255 | 131 | 1 | 91 | 344 | 12 | 266 | 1.77e-85 | 259 |
| Msa1206830 | MtrunA17_Chr8g0383231 | 50.198 | 253 | 124 | 2 | 96 | 348 | 23 | 273 | 6.99e-84 | 256 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1206830 | AT5G47240.1 | 59.392 | 362 | 131 | 5 | 9 | 354 | 2 | 363 | 1.53e-152 | 434 |
| Msa1206830 | AT5G47240.2 | 54.987 | 391 | 131 | 6 | 9 | 354 | 2 | 392 | 1.70e-145 | 417 |
| Msa1206830 | AT4G25434.10 | 48.627 | 255 | 130 | 1 | 91 | 345 | 19 | 272 | 1.26e-85 | 261 |
| Msa1206830 | AT5G47650.5 | 49.225 | 258 | 128 | 2 | 91 | 348 | 19 | 273 | 2.76e-85 | 259 |
| Msa1206830 | AT5G47650.3 | 49.225 | 258 | 128 | 2 | 91 | 348 | 19 | 273 | 2.76e-85 | 259 |
| Msa1206830 | AT5G47650.1 | 49.225 | 258 | 128 | 2 | 91 | 348 | 19 | 273 | 2.76e-85 | 259 |
| Msa1206830 | AT5G47650.2 | 49.225 | 258 | 128 | 2 | 91 | 348 | 66 | 320 | 1.72e-84 | 259 |
| Msa1206830 | AT5G47650.4 | 49.225 | 258 | 128 | 2 | 91 | 348 | 65 | 319 | 1.72e-84 | 259 |
| Msa1206830 | AT4G25434.1 | 47.059 | 255 | 129 | 2 | 91 | 345 | 19 | 267 | 2.14e-80 | 247 |
| Msa1206830 | AT4G25434.8 | 43.972 | 282 | 130 | 2 | 91 | 345 | 19 | 299 | 5.44e-80 | 247 |
| Msa1206830 | AT2G04430.2 | 48.750 | 240 | 119 | 3 | 91 | 326 | 10 | 249 | 1.27e-74 | 233 |
| Msa1206830 | AT4G25434.2 | 42.553 | 282 | 129 | 3 | 91 | 345 | 19 | 294 | 1.48e-74 | 233 |
| Msa1206830 | AT2G04430.1 | 48.750 | 240 | 119 | 3 | 91 | 326 | 29 | 268 | 2.71e-74 | 232 |
| Msa1206830 | AT4G25434.7 | 53.266 | 199 | 92 | 1 | 91 | 289 | 19 | 216 | 2.76e-73 | 227 |
| Msa1206830 | AT4G12720.2 | 46.124 | 258 | 135 | 4 | 91 | 346 | 10 | 265 | 4.41e-72 | 226 |
| Msa1206830 | AT4G12720.3 | 46.124 | 258 | 135 | 4 | 91 | 346 | 10 | 265 | 4.41e-72 | 226 |
| Msa1206830 | AT4G12720.1 | 46.124 | 258 | 135 | 4 | 91 | 346 | 10 | 265 | 4.41e-72 | 226 |
| Msa1206830 | AT4G25434.3 | 50.761 | 197 | 97 | 0 | 149 | 345 | 31 | 227 | 3.18e-68 | 214 |
| Msa1206830 | AT4G25434.5 | 50.761 | 197 | 97 | 0 | 149 | 345 | 31 | 227 | 3.18e-68 | 214 |
| Msa1206830 | AT4G25434.9 | 51.256 | 199 | 91 | 2 | 91 | 289 | 19 | 211 | 7.40e-68 | 213 |
| Msa1206830 | AT4G25434.6 | 46.903 | 226 | 92 | 2 | 91 | 289 | 19 | 243 | 1.13e-67 | 213 |
| Msa1206830 | AT2G04450.1 | 44.656 | 262 | 140 | 5 | 88 | 346 | 7 | 266 | 1.55e-66 | 212 |
| Msa1206830 | AT4G12720.4 | 40.067 | 297 | 134 | 5 | 91 | 345 | 10 | 304 | 4.61e-64 | 207 |
| Msa1206830 | AT4G25434.4 | 48.731 | 197 | 96 | 1 | 149 | 345 | 31 | 222 | 9.39e-63 | 200 |
| Msa1206830 | AT4G12720.5 | 50.746 | 201 | 96 | 3 | 91 | 289 | 10 | 209 | 1.98e-61 | 196 |
| Msa1206830 | AT4G25434.12 | 53.704 | 162 | 74 | 1 | 91 | 252 | 19 | 179 | 1.02e-58 | 190 |
| Msa1206830 | AT4G25434.13 | 43.478 | 207 | 90 | 1 | 166 | 345 | 1 | 207 | 2.68e-53 | 175 |
| Msa1206830 | AT4G25434.11 | 46.032 | 189 | 74 | 2 | 91 | 252 | 19 | 206 | 3.92e-53 | 176 |
| Msa1206830 | AT4G12720.6 | 46.154 | 182 | 95 | 3 | 166 | 345 | 1 | 181 | 3.04e-46 | 156 |
| Msa1206830 | AT2G04440.1 | 47.826 | 138 | 71 | 1 | 91 | 227 | 10 | 147 | 1.33e-37 | 134 |
Find 92 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATGGAATCTTCTTGTATT+AGG | 0.158105 | 8_1:+63945713 | None:intergenic |
| ACAAGTTCCCATTGTATTAA+TGG | 0.183525 | 8_1:-63947815 | Msa1206830:CDS |
| TGGTCTTGTTTGTGCCTAAT+TGG | 0.233692 | 8_1:-63948589 | None:intergenic |
| TAGTAGTATATTTGCATATC+TGG | 0.244040 | 8_1:-63948388 | Msa1206830:five_prime_UTR |
| CATGGAATCTTCTTGTATTA+GGG | 0.250141 | 8_1:+63945714 | None:intergenic |
| TGCCTCAGATGACACTTATT+TGG | 0.255967 | 8_1:-63947879 | Msa1206830:CDS |
| TGCAGGGAAAGAAGGGAATT+TGG | 0.271776 | 8_1:-63947564 | Msa1206830:intron |
| GGATTGTGTGGTAACCTATT+TGG | 0.272788 | 8_1:+63947716 | None:intergenic |
| GATATGTGATGTTAACTTAC+TGG | 0.280931 | 8_1:-63946920 | Msa1206830:CDS |
| CTCCTGCAACTCTTGGCCTT+TGG | 0.301775 | 8_1:-63946614 | Msa1206830:CDS |
| ACTGTGTTGGAAAATAATTC+AGG | 0.325501 | 8_1:-63945555 | Msa1206830:exon |
| TTCCAAAGGCCAAGAGTTGC+AGG | 0.325763 | 8_1:+63946612 | None:intergenic |
| TAAATTACCTTGACAGCAAC+TGG | 0.331130 | 8_1:+63947508 | None:intergenic |
| AGAGAAGTGAAGGAAGAAAC+TGG | 0.340232 | 8_1:-63946179 | Msa1206830:CDS |
| TTGTTGAAGTCATAGCATTC+AGG | 0.346192 | 8_1:-63946011 | Msa1206830:intron |
| TTGAAATTGAAGGAGCAAAA+TGG | 0.347302 | 8_1:-63945765 | Msa1206830:CDS |
| TTCAAATGTGGACAAAGAAT+TGG | 0.348986 | 8_1:+63948289 | None:intergenic |
| GTCAAAGACATTATAGTATA+GGG | 0.352247 | 8_1:+63945591 | None:intergenic |
| CAAGTAGTTTCCAAGTTTGA+TGG | 0.355833 | 8_1:-63945625 | Msa1206830:CDS |
| ATTGCACTTGTTCCTCATTT+CGG | 0.363268 | 8_1:-63945383 | Msa1206830:three_prime_UTR |
| GGAAGCATGCAAGGTCCTTC+AGG | 0.363281 | 8_1:+63946894 | None:intergenic |
| TGTCAAAGACATTATAGTAT+AGG | 0.374450 | 8_1:+63945590 | None:intergenic |
| ACAAGATCAGATTGCTCTAT+AGG | 0.380012 | 8_1:+63947532 | None:intergenic |
| GGATTCTCATTGATCCAAAT+AGG | 0.382227 | 8_1:-63947730 | Msa1206830:CDS |
| AGCATAGATGCAAAGGCATA+TGG | 0.400461 | 8_1:+63947695 | None:intergenic |
| AAAATCTAGATAATCCAATT+AGG | 0.407187 | 8_1:+63948575 | None:intergenic |
| ACTTGATGTGATGCATTTGC+TGG | 0.407708 | 8_1:+63946873 | None:intergenic |
| CACTGTTCTCCTGCAACTCT+TGG | 0.408090 | 8_1:-63946621 | Msa1206830:CDS |
| GATATCTTTATTGCTCGTCT+TGG | 0.413439 | 8_1:-63945676 | Msa1206830:CDS |
| GATGCCTTTGATGATGAGTA+TGG | 0.416511 | 8_1:-63947755 | Msa1206830:CDS |
| ATATCTTTATTGCTCGTCTT+GGG | 0.440305 | 8_1:-63945675 | Msa1206830:CDS |
| GGCCTTTGGAAAATACCAAC+TGG | 0.454871 | 8_1:-63946600 | Msa1206830:CDS |
| CAATACCACCATGCAGAGCC+AGG | 0.462871 | 8_1:-63946942 | Msa1206830:CDS |
| ACTTGTTCCTCATTTCGGTT+TGG | 0.469207 | 8_1:-63945378 | Msa1206830:three_prime_UTR |
| AGTTGATCCATTAATACAAT+GGG | 0.469605 | 8_1:+63947808 | None:intergenic |
| TCTTTGTCCACATTTGAAGT+TGG | 0.473737 | 8_1:-63948284 | Msa1206830:CDS |
| TCTGGATTGTGATCTCTCAT+TGG | 0.490334 | 8_1:-63948370 | Msa1206830:five_prime_UTR |
| TAAGTTAACATCACATATCC+TGG | 0.491360 | 8_1:+63946924 | None:intergenic |
| GCATCACATCAAGTCGGAAT+CGG | 0.491928 | 8_1:-63946864 | Msa1206830:CDS |
| CAGGCAGAGGAGATTTATAC+AGG | 0.497331 | 8_1:-63946209 | Msa1206830:CDS |
| GGACATCAATAGTAGTGTAT+TGG | 0.497750 | 8_1:+63945514 | None:intergenic |
| TTTGTTTATCTCTTTCTCAC+TGG | 0.499015 | 8_1:-63947673 | Msa1206830:CDS |
| GAGAATCTTCACTAAAATCA+AGG | 0.504165 | 8_1:+63948432 | None:intergenic |
| GTGGATGATCTTGAAATTGA+AGG | 0.507225 | 8_1:-63945775 | Msa1206830:CDS |
| TCTTGTTCCAGTTGCTGTCA+AGG | 0.509061 | 8_1:-63947515 | Msa1206830:intron |
| TGTGATCTCTCATTGGAGAC+TGG | 0.514900 | 8_1:-63948363 | Msa1206830:five_prime_UTR |
| GAGAAGTGAAGGAAGAAACT+GGG | 0.516226 | 8_1:-63946178 | Msa1206830:CDS |
| CTACTTTCCAAACCGAAATG+AGG | 0.516325 | 8_1:+63945371 | None:intergenic |
| AGGAGCTGTAAGAGAAGTGA+AGG | 0.519985 | 8_1:-63946189 | Msa1206830:CDS |
| ATATCAATAAAGAGTTGCTA+TGG | 0.528372 | 8_1:-63945419 | Msa1206830:three_prime_UTR |
| CTCATTGGAGACTGGAATTG+TGG | 0.534912 | 8_1:-63948355 | Msa1206830:five_prime_UTR |
| TTATATGTTACATATTCTAC+CGG | 0.542353 | 8_1:+63945493 | None:intergenic |
| AAGTTGATCCATTAATACAA+TGG | 0.544572 | 8_1:+63947807 | None:intergenic |
| TAAACAAAGCATAGATGCAA+AGG | 0.547763 | 8_1:+63947688 | None:intergenic |
| TGATTCAATAAATTACAAGA+TGG | 0.551238 | 8_1:+63945318 | None:intergenic |
| GAATATGTAACATATAATTG+AGG | 0.554318 | 8_1:-63945487 | Msa1206830:three_prime_UTR |
| ATCTACAATCTTCTTGAACA+TGG | 0.556041 | 8_1:+63945696 | None:intergenic |
| TTCAATAAATTACAAGATGG+AGG | 0.558417 | 8_1:+63945321 | None:intergenic |
| ATGGAATCTTCTTGTATTAG+GGG | 0.559760 | 8_1:+63945715 | None:intergenic |
| TCTTTCTCACTGGAAAAGAA+TGG | 0.560278 | 8_1:-63947663 | Msa1206830:intron |
| CGTCTTGGGAAACGTTATTG+TGG | 0.560922 | 8_1:-63945661 | Msa1206830:CDS |
| AAGAGTTGCTATGGAACATG+AGG | 0.567194 | 8_1:-63945410 | Msa1206830:three_prime_UTR |
| AATGATGATTCCAACTGTGT+TGG | 0.569974 | 8_1:-63945568 | Msa1206830:CDS |
| CCCTCCATACTCATCATCAA+AGG | 0.576216 | 8_1:+63947751 | None:intergenic |
| ACCTCATGAATGAATCCAGT+TGG | 0.579034 | 8_1:+63946585 | None:intergenic |
| ATTTGACTAAAGAAACATCA+TGG | 0.581883 | 8_1:+63948479 | None:intergenic |
| CAAATTTGTAAAGGTGCTTG+TGG | 0.584011 | 8_1:-63946655 | Msa1206830:intron |
| GCATTTGCTGGAAGCATGCA+AGG | 0.587186 | 8_1:+63946885 | None:intergenic |
| TCACATATCCTGGCTCTGCA+TGG | 0.590682 | 8_1:+63946934 | None:intergenic |
| AATACACTACTATTGATGTC+CGG | 0.596781 | 8_1:-63945512 | Msa1206830:three_prime_UTR |
| TTAACTTACTGGATTCCTGA+AGG | 0.599287 | 8_1:-63946909 | Msa1206830:CDS |
| AGAAGTGAAGGAAGAAACTG+GGG | 0.603388 | 8_1:-63946177 | Msa1206830:intron |
| TCACATCAAGTCGGAATCGG+AGG | 0.616036 | 8_1:-63946861 | Msa1206830:CDS |
| ATATAGTTCGATACATGCTA+AGG | 0.616553 | 8_1:-63948458 | Msa1206830:five_prime_UTR |
| CCTTTGATGATGAGTATGGA+GGG | 0.620814 | 8_1:-63947751 | Msa1206830:CDS |
| ACAGTGATCGTAGATGATAG+TGG | 0.623914 | 8_1:+63945796 | None:intergenic |
| CCTCAGTTCAAGTGCCGCAG+AGG | 0.632039 | 8_1:-63948203 | Msa1206830:intron |
| TGCTCTACAAACTCAACCAG+TGG | 0.635102 | 8_1:+63945739 | None:intergenic |
| AATAGCGTCAGTGATCAAGA+TGG | 0.635965 | 8_1:-63948330 | Msa1206830:exon |
| GCAAATATACTACTATGTGA+CGG | 0.641189 | 8_1:+63948396 | None:intergenic |
| AGGAGCAAAATGGATGCCAC+TGG | 0.654186 | 8_1:-63945755 | Msa1206830:CDS |
| CATATCCTGGCTCTGCATGG+TGG | 0.655970 | 8_1:+63946937 | None:intergenic |
| TTCTAGGCATGTACACAATG+TGG | 0.663546 | 8_1:-63945860 | Msa1206830:intron |
| GCAAATGCATCACATCAAGT+CGG | 0.666360 | 8_1:-63946870 | Msa1206830:CDS |
| GCCTTTGATGATGAGTATGG+AGG | 0.668533 | 8_1:-63947752 | Msa1206830:CDS |
| AGAGTTGCTATGGAACATGA+GGG | 0.669158 | 8_1:-63945409 | Msa1206830:three_prime_UTR |
| ACCAACTGGATTCATTCATG+AGG | 0.669787 | 8_1:-63946586 | Msa1206830:intron |
| TGCCAAATAAGTGTCATCTG+AGG | 0.672505 | 8_1:+63947877 | None:intergenic |
| GCAAAGGCATATGGATTGTG+TGG | 0.674954 | 8_1:+63947704 | None:intergenic |
| AGCGTCAGTGATCAAGATGG+AGG | 0.685071 | 8_1:-63948327 | Msa1206830:exon |
| CCTAAAACTTGTGAACAGAG+TGG | 0.723584 | 8_1:+63948250 | None:intergenic |
| ACTATCATCTACGATCACTG+TGG | 0.741537 | 8_1:-63945794 | Msa1206830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTATTTTATTCAATCTTA+TGG | - | chr8_1:63947485-63947504 | Msa1206830:intron | 15.0% |
| !!! | TTTTATTTACATCAAAACTT+AGG | + | chr8_1:63947742-63947761 | None:intergenic | 15.0% |
| !! | AAAAATTGAACTTATTCATA+AGG | - | chr8_1:63947764-63947783 | Msa1206830:CDS | 15.0% |
| !! | AAAATCTAGATAATCCAATT+AGG | + | chr8_1:63945307-63945326 | None:intergenic | 20.0% |
| !! | AGCTGATATTTGAATTTAAT+TGG | - | chr8_1:63945884-63945903 | Msa1206830:intron | 20.0% |
| !!! | AGTTTAACATCTTTAATTTC+AGG | - | chr8_1:63945956-63945975 | Msa1206830:intron | 20.0% |
| !!! | GTTTAACATCTTTAATTTCA+GGG | - | chr8_1:63945957-63945976 | Msa1206830:intron | 20.0% |
| !! | TTCTTTATTAATAGAAATGC+AGG | + | chr8_1:63946401-63946420 | None:intergenic | 20.0% |
| !!! | TAACTTGTAATTACGTTAAA+CGG | + | chr8_1:63946505-63946524 | None:intergenic | 20.0% |
| !! | TTGGTTATATTAATTGTCTT+AGG | - | chr8_1:63946543-63946562 | Msa1206830:intron | 20.0% |
| !! | AATTTATTCGTCTATTTGTT+GGG | - | chr8_1:63946645-63946664 | Msa1206830:CDS | 20.0% |
| !!! | CAAATTTGATCAAATTTTCT+AGG | - | chr8_1:63946806-63946825 | Msa1206830:intron | 20.0% |
| !! | TTCTTCTAACAAATTTGTAA+AGG | - | chr8_1:63947215-63947234 | Msa1206830:intron | 20.0% |
| !! | CAATTTATGTTTAAATACCA+CGG | - | chr8_1:63947519-63947538 | Msa1206830:CDS | 20.0% |
| !! | ACATAATGACATTACATAAA+CGG | + | chr8_1:63947616-63947635 | None:intergenic | 20.0% |
| !! | TTATATGTTACATATTCTAC+CGG | + | chr8_1:63948389-63948408 | None:intergenic | 20.0% |
| !! | GAATATGTAACATATAATTG+AGG | - | chr8_1:63948392-63948411 | Msa1206830:five_prime_UTR | 20.0% |
| !! | TGATTCAATAAATTACAAGA+TGG | + | chr8_1:63948564-63948583 | None:intergenic | 20.0% |
| ! | ATTTGACTAAAGAAACATCA+TGG | + | chr8_1:63945403-63945422 | None:intergenic | 25.0% |
| ! | TAGTAGTATATTTGCATATC+TGG | - | chr8_1:63945491-63945510 | Msa1206830:three_prime_UTR | 25.0% |
| !! | AAATTTTCCAACTTCAAATG+TGG | + | chr8_1:63945605-63945624 | None:intergenic | 25.0% |
| ! | AGCTTATATGAGAATCTAAT+TGG | + | chr8_1:63945713-63945732 | None:intergenic | 25.0% |
| !! | TTGCATAAAATCTAAAGTCA+TGG | - | chr8_1:63945752-63945771 | Msa1206830:CDS | 25.0% |
| !! | ATCTAAAGTCATGGTTAATA+TGG | - | chr8_1:63945761-63945780 | Msa1206830:CDS | 25.0% |
| ! | CTAAAATGTTAAAGAGAATG+TGG | - | chr8_1:63945919-63945938 | Msa1206830:intron | 25.0% |
| ! | AGTTGATCCATTAATACAAT+GGG | + | chr8_1:63946074-63946093 | None:intergenic | 25.0% |
| !! | AAGTTGATCCATTAATACAA+TGG | + | chr8_1:63946075-63946094 | None:intergenic | 25.0% |
| ! | ATTGAAAACCTAACATTATG+TGG | - | chr8_1:63946289-63946308 | Msa1206830:intron | 25.0% |
| ! | AATGTATAAAGTGTATCCTA+CGG | - | chr8_1:63946569-63946588 | Msa1206830:intron | 25.0% |
| ! | CAATTTATTCGTCTATTTGT+TGG | - | chr8_1:63946644-63946663 | Msa1206830:CDS | 25.0% |
| ! | ACAATGCTTGTAAAACAAAA+AGG | - | chr8_1:63946695-63946714 | Msa1206830:intron | 25.0% |
| ! | TCAATCAAAACAATGAAGTA+TGG | - | chr8_1:63947049-63947068 | Msa1206830:intron | 25.0% |
| ! | ATATCATTATCATGCTATGT+TGG | + | chr8_1:63947101-63947120 | None:intergenic | 25.0% |
| !! | ATTTGGTTTATTGAGCATTT+AGG | + | chr8_1:63947341-63947360 | None:intergenic | 25.0% |
| ! | ATCTGTTTACCATTGAATAA+GGG | + | chr8_1:63947385-63947404 | None:intergenic | 25.0% |
| ! | TATTCATAAGGTTACATGAT+AGG | - | chr8_1:63947776-63947795 | Msa1206830:CDS | 25.0% |
| ! | TGAACTTCTTGATAAATTCT+AGG | - | chr8_1:63948003-63948022 | Msa1206830:intron | 25.0% |
| ! | GTCAAAGACATTATAGTATA+GGG | + | chr8_1:63948291-63948310 | None:intergenic | 25.0% |
| ! | TGTCAAAGACATTATAGTAT+AGG | + | chr8_1:63948292-63948311 | None:intergenic | 25.0% |
| ! | ATATCAATAAAGAGTTGCTA+TGG | - | chr8_1:63948460-63948479 | Msa1206830:five_prime_UTR | 25.0% |
| ! | TTCAATAAATTACAAGATGG+AGG | + | chr8_1:63948561-63948580 | None:intergenic | 25.0% |
| ATATAGTTCGATACATGCTA+AGG | - | chr8_1:63945421-63945440 | Msa1206830:three_prime_UTR | 30.0% | |
| GAGAATCTTCACTAAAATCA+AGG | + | chr8_1:63945450-63945469 | None:intergenic | 30.0% | |
| GCAAATATACTACTATGTGA+CGG | + | chr8_1:63945486-63945505 | None:intergenic | 30.0% | |
| TTCAAATGTGGACAAAGAAT+TGG | + | chr8_1:63945593-63945612 | None:intergenic | 30.0% | |
| !!! | ACAAGTTTTAGGCACAAATT+TGG | - | chr8_1:63945640-63945659 | Msa1206830:CDS | 30.0% |
| GACTAAACTCCTTATTATCA+GGG | + | chr8_1:63945830-63945849 | None:intergenic | 30.0% | |
| AGACTAAACTCCTTATTATC+AGG | + | chr8_1:63945831-63945850 | None:intergenic | 30.0% | |
| TTAAAGAGAATGTGGAACAT+GGG | - | chr8_1:63945927-63945946 | Msa1206830:intron | 30.0% | |
| ACAAGTTCCCATTGTATTAA+TGG | - | chr8_1:63946064-63946083 | Msa1206830:intron | 30.0% | |
| TAAACAAAGCATAGATGCAA+AGG | + | chr8_1:63946194-63946213 | None:intergenic | 30.0% | |
| TTTGTTTATCTCTTTCTCAC+TGG | - | chr8_1:63946206-63946225 | Msa1206830:CDS | 30.0% | |
| TTTCACTAGGATAATACACA+TGG | + | chr8_1:63946255-63946274 | None:intergenic | 30.0% | |
| !! | TAACATTATGTGGTTTTGCA+GGG | - | chr8_1:63946299-63946318 | Msa1206830:intron | 30.0% |
| CAAATATCATTGCGTGATTT+AGG | + | chr8_1:63946463-63946482 | None:intergenic | 30.0% | |
| ! | AGTTATGATTAGTTGCAAGT+TGG | - | chr8_1:63946524-63946543 | Msa1206830:intron | 30.0% |
| AGAAACATTCACAAAATGAC+TGG | - | chr8_1:63946783-63946802 | Msa1206830:intron | 30.0% | |
| TAAGTTAACATCACATATCC+TGG | + | chr8_1:63946958-63946977 | None:intergenic | 30.0% | |
| GATATGTGATGTTAACTTAC+TGG | - | chr8_1:63946959-63946978 | Msa1206830:intron | 30.0% | |
| ! | TATTTTGCAAAAGCTTTGCA+AGG | - | chr8_1:63947118-63947137 | Msa1206830:intron | 30.0% |
| TGTTCTAACAGCTTTCTATT+TGG | + | chr8_1:63947358-63947377 | None:intergenic | 30.0% | |
| CATCTGTTTACCATTGAATA+AGG | + | chr8_1:63947386-63947405 | None:intergenic | 30.0% | |
| ! | GAATTTCTTGATGACATGAT+TGG | + | chr8_1:63947899-63947918 | None:intergenic | 30.0% |
| TTGAAATTGAAGGAGCAAAA+TGG | - | chr8_1:63948114-63948133 | Msa1206830:intron | 30.0% | |
| ATGGAATCTTCTTGTATTAG+GGG | + | chr8_1:63948167-63948186 | None:intergenic | 30.0% | |
| CATGGAATCTTCTTGTATTA+GGG | + | chr8_1:63948168-63948187 | None:intergenic | 30.0% | |
| ACATGGAATCTTCTTGTATT+AGG | + | chr8_1:63948169-63948188 | None:intergenic | 30.0% | |
| ATCTACAATCTTCTTGAACA+TGG | + | chr8_1:63948186-63948205 | None:intergenic | 30.0% | |
| ATATCTTTATTGCTCGTCTT+GGG | - | chr8_1:63948204-63948223 | Msa1206830:CDS | 30.0% | |
| ! | AGTAATTTTGCCATCAAACT+TGG | + | chr8_1:63948267-63948286 | None:intergenic | 30.0% |
| ! | GAATTATTTTCCAACACAGT+TGG | + | chr8_1:63948324-63948343 | None:intergenic | 30.0% |
| ACTGTGTTGGAAAATAATTC+AGG | - | chr8_1:63948324-63948343 | Msa1206830:exon | 30.0% | |
| AATACACTACTATTGATGTC+CGG | - | chr8_1:63948367-63948386 | Msa1206830:five_prime_UTR | 30.0% | |
| ! | TCTTTGTCCACATTTGAAGT+TGG | - | chr8_1:63945595-63945614 | Msa1206830:CDS | 35.0% |
| TAATAAGGAGTTTAGTCTCG+AGG | - | chr8_1:63945833-63945852 | Msa1206830:CDS | 35.0% | |
| GTTAAAGAGAATGTGGAACA+TGG | - | chr8_1:63945926-63945945 | Msa1206830:intron | 35.0% | |
| GGATTCTCATTGATCCAAAT+AGG | - | chr8_1:63946149-63946168 | Msa1206830:intron | 35.0% | |
| TCTTTCTCACTGGAAAAGAA+TGG | - | chr8_1:63946216-63946235 | Msa1206830:intron | 35.0% | |
| CTGCAAAACCACATAATGTT+AGG | + | chr8_1:63946300-63946319 | None:intergenic | 35.0% | |
| !! | CTAACATTATGTGGTTTTGC+AGG | - | chr8_1:63946298-63946317 | Msa1206830:intron | 35.0% |
| ACAAGATCAGATTGCTCTAT+AGG | + | chr8_1:63946350-63946369 | None:intergenic | 35.0% | |
| TAAATTACCTTGACAGCAAC+TGG | + | chr8_1:63946374-63946393 | None:intergenic | 35.0% | |
| !! | AAAACAAAAAGGCACCATGT+TGG | - | chr8_1:63946706-63946725 | Msa1206830:intron | 35.0% |
| !!! | ATTGAACTTTTTCGCCAACA+TGG | + | chr8_1:63946723-63946742 | None:intergenic | 35.0% |
| ! | TGAGGTAACTAGACTCATTT+TGG | - | chr8_1:63946899-63946918 | Msa1206830:CDS | 35.0% |
| TTAACTTACTGGATTCCTGA+AGG | - | chr8_1:63946970-63946989 | Msa1206830:intron | 35.0% | |
| !! | CAAATTTGTAAAGGTGCTTG+TGG | - | chr8_1:63947224-63947243 | Msa1206830:intron | 35.0% |
| !! | ATCCAGTTGGTATTTTCCAA+AGG | + | chr8_1:63947284-63947303 | None:intergenic | 35.0% |
| GAACAGAAACCCTTATTCAA+TGG | - | chr8_1:63947373-63947392 | Msa1206830:intron | 35.0% | |
| TTAGGGGAAATCATGTAAAC+TGG | + | chr8_1:63947546-63947565 | None:intergenic | 35.0% | |
| TTATGTTGCGTACAGTTTAG+GGG | + | chr8_1:63947562-63947581 | None:intergenic | 35.0% | |
| CTTATGTTGCGTACAGTTTA+GGG | + | chr8_1:63947563-63947582 | None:intergenic | 35.0% | |
| TCTTATGTTGCGTACAGTTT+AGG | + | chr8_1:63947564-63947583 | None:intergenic | 35.0% | |
| TCACTTGTGTGAATTATCTC+AGG | - | chr8_1:63947651-63947670 | Msa1206830:intron | 35.0% | |
| TTGTTGAAGTCATAGCATTC+AGG | - | chr8_1:63947868-63947887 | Msa1206830:CDS | 35.0% | |
| GTGGATGATCTTGAAATTGA+AGG | - | chr8_1:63948104-63948123 | Msa1206830:intron | 35.0% | |
| GATATCTTTATTGCTCGTCT+TGG | - | chr8_1:63948203-63948222 | Msa1206830:intron | 35.0% | |
| CAAGTAGTTTCCAAGTTTGA+TGG | - | chr8_1:63948254-63948273 | Msa1206830:CDS | 35.0% | |
| AATGATGATTCCAACTGTGT+TGG | - | chr8_1:63948311-63948330 | Msa1206830:CDS | 35.0% | |
| GGACATCAATAGTAGTGTAT+TGG | + | chr8_1:63948368-63948387 | None:intergenic | 35.0% | |
| ATTGCACTTGTTCCTCATTT+CGG | - | chr8_1:63948496-63948515 | Msa1206830:five_prime_UTR | 35.0% | |
| TCTGGATTGTGATCTCTCAT+TGG | - | chr8_1:63945509-63945528 | Msa1206830:three_prime_UTR | 40.0% | |
| AATAGCGTCAGTGATCAAGA+TGG | - | chr8_1:63945549-63945568 | Msa1206830:exon | 40.0% | |
| CCTAAAACTTGTGAACAGAG+TGG | + | chr8_1:63945632-63945651 | None:intergenic | 40.0% | |
| ! | CCACTCTGTTCACAAGTTTT+AGG | - | chr8_1:63945629-63945648 | Msa1206830:CDS | 40.0% |
| !!! | TGGCTTTTTAGTTACCTCTG+CGG | + | chr8_1:63945693-63945712 | None:intergenic | 40.0% |
| TCATTAACTCTCCGATTCTC+AGG | - | chr8_1:63945797-63945816 | Msa1206830:CDS | 40.0% | |
| CATTAACTCTCCGATTCTCA+GGG | - | chr8_1:63945798-63945817 | Msa1206830:CDS | 40.0% | |
| GGGAAATGACCCTGATAATA+AGG | - | chr8_1:63945818-63945837 | Msa1206830:CDS | 40.0% | |
| TGCCTCAGATGACACTTATT+TGG | - | chr8_1:63946000-63946019 | Msa1206830:intron | 40.0% | |
| TGCCAAATAAGTGTCATCTG+AGG | + | chr8_1:63946005-63946024 | None:intergenic | 40.0% | |
| !! | GATGCCTTTGATGATGAGTA+TGG | - | chr8_1:63946124-63946143 | Msa1206830:intron | 40.0% |
| !! | CCTTTGATGATGAGTATGGA+GGG | - | chr8_1:63946128-63946147 | Msa1206830:intron | 40.0% |
| GGATTGTGTGGTAACCTATT+TGG | + | chr8_1:63946166-63946185 | None:intergenic | 40.0% | |
| ! | AGCATAGATGCAAAGGCATA+TGG | + | chr8_1:63946187-63946206 | None:intergenic | 40.0% |
| TGCTAGATGATGCTTTCACT+AGG | + | chr8_1:63946268-63946287 | None:intergenic | 40.0% | |
| AAAACTTGATACACGACCGT+AGG | + | chr8_1:63946588-63946607 | None:intergenic | 40.0% | |
| !! | GAAGTGTTGCTGAATCTATG+AGG | - | chr8_1:63946881-63946900 | Msa1206830:CDS | 40.0% |
| !! | ACTAGACTCATTTTGGTCTC+AGG | - | chr8_1:63946906-63946925 | Msa1206830:CDS | 40.0% |
| ACTTGATGTGATGCATTTGC+TGG | + | chr8_1:63947009-63947028 | None:intergenic | 40.0% | |
| GCAAATGCATCACATCAAGT+CGG | - | chr8_1:63947009-63947028 | Msa1206830:intron | 40.0% | |
| ACCAACTGGATTCATTCATG+AGG | - | chr8_1:63947293-63947312 | Msa1206830:intron | 40.0% | |
| ACCTCATGAATGAATCCAGT+TGG | + | chr8_1:63947297-63947316 | None:intergenic | 40.0% | |
| AAATCATGTAAACTGGACCG+TGG | + | chr8_1:63947539-63947558 | None:intergenic | 40.0% | |
| AGAGAAGTGAAGGAAGAAAC+TGG | - | chr8_1:63947700-63947719 | Msa1206830:CDS | 40.0% | |
| GAGAAGTGAAGGAAGAAACT+GGG | - | chr8_1:63947701-63947720 | Msa1206830:CDS | 40.0% | |
| AGAAGTGAAGGAAGAAACTG+GGG | - | chr8_1:63947702-63947721 | Msa1206830:CDS | 40.0% | |
| TTCTAGGCATGTACACAATG+TGG | - | chr8_1:63948019-63948038 | Msa1206830:intron | 40.0% | |
| ACAGTGATCGTAGATGATAG+TGG | + | chr8_1:63948086-63948105 | None:intergenic | 40.0% | |
| ACTATCATCTACGATCACTG+TGG | - | chr8_1:63948085-63948104 | Msa1206830:intron | 40.0% | |
| AAGAGTTGCTATGGAACATG+AGG | - | chr8_1:63948469-63948488 | Msa1206830:five_prime_UTR | 40.0% | |
| AGAGTTGCTATGGAACATGA+GGG | - | chr8_1:63948470-63948489 | Msa1206830:five_prime_UTR | 40.0% | |
| ACTTGTTCCTCATTTCGGTT+TGG | - | chr8_1:63948501-63948520 | Msa1206830:five_prime_UTR | 40.0% | |
| CTACTTTCCAAACCGAAATG+AGG | + | chr8_1:63948511-63948530 | None:intergenic | 40.0% | |
| TGTGATCTCTCATTGGAGAC+TGG | - | chr8_1:63945516-63945535 | Msa1206830:three_prime_UTR | 45.0% | |
| CTCATTGGAGACTGGAATTG+TGG | - | chr8_1:63945524-63945543 | Msa1206830:three_prime_UTR | 45.0% | |
| AGGGTCATTTCCCTGAGAAT+CGG | + | chr8_1:63945811-63945830 | None:intergenic | 45.0% | |
| !! | GCCTTTGATGATGAGTATGG+AGG | - | chr8_1:63946127-63946146 | Msa1206830:intron | 45.0% |
| CCCTCCATACTCATCATCAA+AGG | + | chr8_1:63946131-63946150 | None:intergenic | 45.0% | |
| ! | GCAAAGGCATATGGATTGTG+TGG | + | chr8_1:63946178-63946197 | None:intergenic | 45.0% |
| !! | TGTGGTTTTGCAGGGAAAGA+AGG | - | chr8_1:63946307-63946326 | Msa1206830:intron | 45.0% |
| !! | GTGGTTTTGCAGGGAAAGAA+GGG | - | chr8_1:63946308-63946327 | Msa1206830:intron | 45.0% |
| TGCAGGGAAAGAAGGGAATT+TGG | - | chr8_1:63946315-63946334 | Msa1206830:intron | 45.0% | |
| TCTTGTTCCAGTTGCTGTCA+AGG | - | chr8_1:63946364-63946383 | Msa1206830:intron | 45.0% | |
| ! | CGTCTATTTGTTGGGCTCTA+CGG | - | chr8_1:63946653-63946672 | Msa1206830:intron | 45.0% |
| !! | GACTCATTTTGGTCTCAGGA+AGG | - | chr8_1:63946910-63946929 | Msa1206830:CDS | 45.0% |
| GCATCACATCAAGTCGGAAT+CGG | - | chr8_1:63947015-63947034 | Msa1206830:intron | 45.0% | |
| ! | GGCCTTTGGAAAATACCAAC+TGG | - | chr8_1:63947279-63947298 | Msa1206830:intron | 45.0% |
| GTGTGAATTATCTCAGGCAG+AGG | - | chr8_1:63947657-63947676 | Msa1206830:intron | 45.0% | |
| CAGGCAGAGGAGATTTATAC+AGG | - | chr8_1:63947670-63947689 | Msa1206830:CDS | 45.0% | |
| AGGAGCTGTAAGAGAAGTGA+AGG | - | chr8_1:63947690-63947709 | Msa1206830:CDS | 45.0% | |
| TGCTCTACAAACTCAACCAG+TGG | + | chr8_1:63948143-63948162 | None:intergenic | 45.0% | |
| CGTCTTGGGAAACGTTATTG+TGG | - | chr8_1:63948218-63948237 | Msa1206830:CDS | 45.0% | |
| AGCGTCAGTGATCAAGATGG+AGG | - | chr8_1:63945552-63945571 | Msa1206830:exon | 50.0% | |
| !! | TCACATATCCTGGCTCTGCA+TGG | + | chr8_1:63946948-63946967 | None:intergenic | 50.0% |
| ! | GCATTTGCTGGAAGCATGCA+AGG | + | chr8_1:63946997-63947016 | None:intergenic | 50.0% |
| TCACATCAAGTCGGAATCGG+AGG | - | chr8_1:63947018-63947037 | Msa1206830:intron | 50.0% | |
| CACTGTTCTCCTGCAACTCT+TGG | - | chr8_1:63947258-63947277 | Msa1206830:intron | 50.0% | |
| TTCCAAAGGCCAAGAGTTGC+AGG | + | chr8_1:63947270-63947289 | None:intergenic | 50.0% | |
| AGGAGCAAAATGGATGCCAC+TGG | - | chr8_1:63948124-63948143 | Msa1206830:intron | 50.0% | |
| CAATACCACCATGCAGAGCC+AGG | - | chr8_1:63946937-63946956 | Msa1206830:CDS | 55.0% | |
| !! | CATATCCTGGCTCTGCATGG+TGG | + | chr8_1:63946945-63946964 | None:intergenic | 55.0% |
| ! | GGAAGCATGCAAGGTCCTTC+AGG | + | chr8_1:63946988-63947007 | None:intergenic | 55.0% |
| ! | CTCCTGCAACTCTTGGCCTT+TGG | - | chr8_1:63947265-63947284 | Msa1206830:intron | 55.0% |
| CCTCTGCGGCACTTGAACTG+AGG | + | chr8_1:63945679-63945698 | None:intergenic | 60.0% | |
| ! | CCTCAGTTCAAGTGCCGCAG+AGG | - | chr8_1:63945676-63945695 | Msa1206830:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 63945303 | 63948598 | 63945303 | ID=Msa1206830;Name=Msa1206830 |
| chr8_1 | mRNA | 63945303 | 63948598 | 63945303 | ID=Msa1206830-mRNA-1;Parent=Msa1206830;Name=Msa1206830-mRNA-1;_AED=0.16;_eAED=0.16;_QI=265|1|1|1|1|1|8|258|357 |
| chr8_1 | exon | 63945303 | 63945876 | 63945303 | ID=Msa1206830-mRNA-1:exon:20884;Parent=Msa1206830-mRNA-1 |
| chr8_1 | exon | 63946012 | 63946046 | 63946012 | ID=Msa1206830-mRNA-1:exon:20883;Parent=Msa1206830-mRNA-1 |
| chr8_1 | exon | 63946178 | 63946228 | 63946178 | ID=Msa1206830-mRNA-1:exon:20882;Parent=Msa1206830-mRNA-1 |
| chr8_1 | exon | 63946587 | 63946664 | 63946587 | ID=Msa1206830-mRNA-1:exon:20881;Parent=Msa1206830-mRNA-1 |
| chr8_1 | exon | 63946836 | 63946973 | 63946836 | ID=Msa1206830-mRNA-1:exon:20880;Parent=Msa1206830-mRNA-1 |
| chr8_1 | exon | 63947516 | 63947581 | 63947516 | ID=Msa1206830-mRNA-1:exon:20879;Parent=Msa1206830-mRNA-1 |
| chr8_1 | exon | 63947664 | 63947923 | 63947664 | ID=Msa1206830-mRNA-1:exon:20878;Parent=Msa1206830-mRNA-1 |
| chr8_1 | exon | 63948204 | 63948598 | 63948204 | ID=Msa1206830-mRNA-1:exon:20877;Parent=Msa1206830-mRNA-1 |
| chr8_1 | five_prime_UTR | 63948334 | 63948598 | 63948334 | ID=Msa1206830-mRNA-1:five_prime_utr;Parent=Msa1206830-mRNA-1 |
| chr8_1 | CDS | 63948204 | 63948333 | 63948204 | ID=Msa1206830-mRNA-1:cds;Parent=Msa1206830-mRNA-1 |
| chr8_1 | CDS | 63947664 | 63947923 | 63947664 | ID=Msa1206830-mRNA-1:cds;Parent=Msa1206830-mRNA-1 |
| chr8_1 | CDS | 63947516 | 63947581 | 63947516 | ID=Msa1206830-mRNA-1:cds;Parent=Msa1206830-mRNA-1 |
| chr8_1 | CDS | 63946836 | 63946973 | 63946836 | ID=Msa1206830-mRNA-1:cds;Parent=Msa1206830-mRNA-1 |
| chr8_1 | CDS | 63946587 | 63946664 | 63946587 | ID=Msa1206830-mRNA-1:cds;Parent=Msa1206830-mRNA-1 |
| chr8_1 | CDS | 63946178 | 63946228 | 63946178 | ID=Msa1206830-mRNA-1:cds;Parent=Msa1206830-mRNA-1 |
| chr8_1 | CDS | 63946012 | 63946046 | 63946012 | ID=Msa1206830-mRNA-1:cds;Parent=Msa1206830-mRNA-1 |
| chr8_1 | CDS | 63945561 | 63945876 | 63945561 | ID=Msa1206830-mRNA-1:cds;Parent=Msa1206830-mRNA-1 |
| chr8_1 | three_prime_UTR | 63945303 | 63945560 | 63945303 | ID=Msa1206830-mRNA-1:three_prime_utr;Parent=Msa1206830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
