Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0755090 | XP_003611409.1 | 97.606 | 543 | 13 | 0 | 1 | 543 | 1 | 543 | 0.0 | 1110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0755090 | sp|O23553|BAM3_ARATH | 70.290 | 552 | 151 | 7 | 1 | 543 | 1 | 548 | 0.0 | 810 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0755090 | G7JYN3 | 97.606 | 543 | 13 | 0 | 1 | 543 | 1 | 543 | 0.0 | 1110 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004610 | Msa0755090 | 0.811712 | 6.104978e-51 | -8.615850e-47 |
| Msa0008850 | Msa0755090 | 0.822147 | 2.766663e-53 | -8.615850e-47 |
| Msa0014410 | Msa0755090 | 0.823011 | 1.742548e-53 | -8.615850e-47 |
| Msa0020630 | Msa0755090 | 0.807474 | 4.967084e-50 | -8.615850e-47 |
| Msa0038310 | Msa0755090 | 0.836871 | 7.257113e-57 | -8.615850e-47 |
| Msa0044710 | Msa0755090 | 0.803724 | 3.040866e-49 | -8.615850e-47 |
| Msa0047470 | Msa0755090 | 0.804612 | 1.986820e-49 | -8.615850e-47 |
| Msa0055280 | Msa0755090 | 0.803900 | 2.795051e-49 | -8.615850e-47 |
| Msa0064550 | Msa0755090 | 0.829187 | 5.921366e-55 | -8.615850e-47 |
| Msa0068410 | Msa0755090 | 0.835217 | 1.908014e-56 | -8.615850e-47 |
| Msa0072830 | Msa0755090 | 0.804595 | 2.003186e-49 | -8.615850e-47 |
| Msa0072860 | Msa0755090 | 0.810802 | 9.615741e-51 | -8.615850e-47 |
| Msa0096020 | Msa0755090 | 0.825268 | 5.141217e-54 | -8.615850e-47 |
| Msa0101060 | Msa0755090 | 0.807452 | 5.020087e-50 | -8.615850e-47 |
| Msa0103060 | Msa0755090 | 0.802429 | 5.634523e-49 | -8.615850e-47 |
| Msa0109490 | Msa0755090 | 0.827163 | 1.821182e-54 | -8.615850e-47 |
| Msa0114250 | Msa0755090 | 0.806945 | 6.428933e-50 | -8.615850e-47 |
| Msa0610770 | Msa0755090 | 0.843722 | 1.176228e-58 | -8.615850e-47 |
| Msa0618520 | Msa0755090 | 0.808299 | 3.315906e-50 | -8.615850e-47 |
| Msa0620640 | Msa0755090 | 0.806583 | 7.665170e-50 | -8.615850e-47 |
| Msa0621780 | Msa0755090 | 0.842228 | 2.940168e-58 | -8.615850e-47 |
| Msa0622910 | Msa0755090 | -0.801173 | 1.020207e-48 | -8.615850e-47 |
| Msa0628100 | Msa0755090 | 0.823021 | 1.732868e-53 | -8.615850e-47 |
| Msa0650640 | Msa0755090 | 0.804565 | 2.032348e-49 | -8.615850e-47 |
| Msa0650650 | Msa0755090 | 0.867029 | 1.849565e-65 | -8.615850e-47 |
| Msa0650730 | Msa0755090 | 0.803511 | 3.366092e-49 | -8.615850e-47 |
| Msa0650740 | Msa0755090 | 0.868800 | 4.987135e-66 | -8.615850e-47 |
| Msa0651320 | Msa0755090 | 0.835714 | 1.428458e-56 | -8.615850e-47 |
| Msa0665790 | Msa0755090 | 0.809126 | 2.207003e-50 | -8.615850e-47 |
| Msa0676100 | Msa0755090 | 0.819588 | 1.073255e-52 | -8.615850e-47 |
| Msa0693490 | Msa0755090 | 0.847863 | 8.833231e-60 | -8.615850e-47 |
| Msa0713210 | Msa0755090 | 0.889364 | 2.588110e-73 | -8.615850e-47 |
| Msa0713220 | Msa0755090 | 0.890598 | 8.522971e-74 | -8.615850e-47 |
| Msa0713230 | Msa0755090 | 0.863511 | 2.362672e-64 | -8.615850e-47 |
| Msa0726610 | Msa0755090 | 0.813317 | 2.721072e-51 | -8.615850e-47 |
| Msa0754350 | Msa0755090 | 0.872999 | 2.065028e-67 | -8.615850e-47 |
| Msa0755080 | Msa0755090 | 0.906677 | 1.149099e-80 | -8.615850e-47 |
| Msa0755090 | Msa0772150 | 0.802347 | 5.857692e-49 | -8.615850e-47 |
| Msa0755090 | Msa0787720 | 0.824125 | 9.563262e-54 | -8.615850e-47 |
| Msa0755090 | Msa0790640 | 0.803802 | 2.929314e-49 | -8.615850e-47 |
| Msa0755090 | Msa0795710 | 0.843522 | 1.330964e-58 | -8.615850e-47 |
| Msa0755090 | Msa0796950 | 0.834896 | 2.298627e-56 | -8.615850e-47 |
| Msa0755090 | Msa0797000 | 0.874901 | 4.699485e-68 | -8.615850e-47 |
| Msa0755090 | Msa0822370 | 0.826246 | 3.013566e-54 | -8.615850e-47 |
| Msa0755090 | Msa0828570 | 0.839740 | 1.322557e-57 | -8.615850e-47 |
| Msa0755090 | Msa0833450 | 0.838064 | 3.590761e-57 | -8.615850e-47 |
| Msa0755090 | Msa0834450 | 0.912760 | 1.346177e-83 | -8.615850e-47 |
| Msa0755090 | Msa0834460 | 0.978545 | 4.740747e-146 | -8.615850e-47 |
| Msa0755090 | Msa0834600 | 0.848923 | 4.498075e-60 | -8.615850e-47 |
| Msa0755090 | Msa0847200 | 0.801549 | 8.545426e-49 | -8.615850e-47 |
| Msa0755090 | Msa0851740 | 0.800740 | 1.250462e-48 | -8.615850e-47 |
| Msa0755090 | Msa0861800 | 0.813812 | 2.117963e-51 | -8.615850e-47 |
| Msa0755090 | Msa0887070 | 0.819332 | 1.227740e-52 | -8.615850e-47 |
| Msa0755090 | Msa0899700 | 0.810721 | 1.001277e-50 | -8.615850e-47 |
| Msa0755090 | Msa0904630 | 0.804269 | 2.342405e-49 | -8.615850e-47 |
| Msa0755090 | Msa0950410 | 0.838703 | 2.456065e-57 | -8.615850e-47 |
| Msa0755090 | Msa0950620 | 0.840130 | 1.046359e-57 | -8.615850e-47 |
| Msa0755090 | Msa0964580 | 0.839757 | 1.308806e-57 | -8.615850e-47 |
| Msa0755090 | Msa0964680 | 0.827492 | 1.518735e-54 | -8.615850e-47 |
| Msa0755090 | Msa0971860 | 0.824393 | 8.268777e-54 | -8.615850e-47 |
| Msa0755090 | Msa0984000 | 0.830860 | 2.314488e-55 | -8.615850e-47 |
| Msa0755090 | Msa1012920 | 0.825771 | 3.907643e-54 | -8.615850e-47 |
| Msa0755090 | Msa1016110 | 0.811976 | 5.346306e-51 | -8.615850e-47 |
| Msa0755090 | Msa1036250 | 0.827072 | 1.914065e-54 | -8.615850e-47 |
| Msa0755090 | Msa1037020 | 0.813890 | 2.035878e-51 | -8.615850e-47 |
| Msa0755090 | Msa1044040 | 0.803807 | 2.923204e-49 | -8.615850e-47 |
| Msa0755090 | Msa1053690 | 0.813057 | 3.102836e-51 | -8.615850e-47 |
| Msa0755090 | Msa1055360 | 0.812417 | 4.285528e-51 | -8.615850e-47 |
| Msa0755090 | Msa1075590 | 0.813747 | 2.188514e-51 | -8.615850e-47 |
| Msa0755090 | Msa1076520 | 0.841209 | 5.460262e-58 | -8.615850e-47 |
| Msa0755090 | Msa1093390 | 0.801070 | 1.071047e-48 | -8.615850e-47 |
| Msa0755090 | Msa1105270 | 0.801540 | 8.580574e-49 | -8.615850e-47 |
| Msa0755090 | Msa1120620 | 0.814266 | 1.681598e-51 | -8.615850e-47 |
| Msa0755090 | Msa1131420 | 0.812892 | 3.373516e-51 | -8.615850e-47 |
| Msa0755090 | Msa1134560 | 0.837133 | 6.220192e-57 | -8.615850e-47 |
| Msa0755090 | Msa1134690 | 0.836812 | 7.512593e-57 | -8.615850e-47 |
| Msa0755090 | Msa1157020 | 0.823487 | 1.348965e-53 | -8.615850e-47 |
| Msa0755090 | Msa1157920 | 0.807369 | 5.226702e-50 | -8.615850e-47 |
| Msa0755090 | Msa1162980 | 0.822683 | 2.078178e-53 | -8.615850e-47 |
| Msa0755090 | Msa1164530 | 0.815857 | 7.458328e-52 | -8.615850e-47 |
| Msa0755090 | Msa1177620 | 0.817892 | 2.604473e-52 | -8.615850e-47 |
| Msa0755090 | Msa1182830 | 0.845925 | 2.995647e-59 | -8.615850e-47 |
| Msa0755090 | Msa1200960 | 0.824647 | 7.207789e-54 | -8.615850e-47 |
| Msa0755090 | Msa1206760 | 0.819822 | 9.491823e-53 | -8.615850e-47 |
| Msa0755090 | Msa1206830 | 0.813322 | 2.713689e-51 | -8.615850e-47 |
| Msa0755090 | Msa1209020 | 0.809589 | 1.756058e-50 | -8.615850e-47 |
| Msa0755090 | Msa1209790 | 0.812191 | 4.800456e-51 | -8.615850e-47 |
| Msa0755090 | Msa1211390 | 0.835008 | 2.154198e-56 | -8.615850e-47 |
| Msa0755090 | Msa1219780 | -0.830340 | 3.103207e-55 | -8.615850e-47 |
| Msa0755090 | Msa1222030 | -0.817000 | 4.137209e-52 | -8.615850e-47 |
| Msa0755090 | Msa1225820 | 0.800620 | 1.323358e-48 | -8.615850e-47 |
| Msa0755090 | Msa1237260 | 0.820066 | 8.348287e-53 | -8.615850e-47 |
| Msa0755090 | Msa1241820 | 0.836196 | 1.078117e-56 | -8.615850e-47 |
| Msa0755090 | Msa1248220 | 0.818218 | 2.198823e-52 | -8.615850e-47 |
| Msa0755090 | Msa1253970 | 0.818465 | 1.932436e-52 | -8.615850e-47 |
| Msa0755090 | Msa1266710 | -0.803671 | 3.118263e-49 | -8.615850e-47 |
| Msa0755090 | Msa1272950 | 0.842846 | 2.014401e-58 | -8.615850e-47 |
| Msa0755090 | Msa1282210 | 0.820149 | 7.990654e-53 | -8.615850e-47 |
| Msa0755090 | Msa1282920 | 0.805411 | 1.352596e-49 | -8.615850e-47 |
| Msa0755090 | Msa1284390 | 0.800100 | 1.688339e-48 | -8.615850e-47 |
| Msa0755090 | Msa1287360 | 0.816115 | 6.531161e-52 | -8.615850e-47 |
| Msa0755090 | Msa1306190 | 0.837404 | 5.303674e-57 | -8.615850e-47 |
| Msa0755090 | Msa1306200 | 0.855556 | 5.826520e-62 | -8.615850e-47 |
| Msa0755090 | Msa1317710 | 0.803385 | 3.574439e-49 | -8.615850e-47 |
| Msa0755090 | Msa1326400 | 0.843542 | 1.314209e-58 | -8.615850e-47 |
| Msa0755090 | Msa1349360 | 0.818066 | 2.378979e-52 | -8.615850e-47 |
| Msa0755090 | Msa1349810 | 0.835395 | 1.720550e-56 | -8.615850e-47 |
| Msa0755090 | Msa1353670 | 0.851652 | 7.721252e-61 | -8.615850e-47 |
| Msa0755090 | Msa1353680 | 0.822019 | 2.963213e-53 | -8.615850e-47 |
| Msa0755090 | Msa1354090 | 0.833021 | 6.774659e-56 | -8.615850e-47 |
| Msa0755090 | Msa1356180 | 0.885249 | 9.571727e-72 | -8.615850e-47 |
| Msa0755090 | Msa1361190 | 0.822537 | 2.246741e-53 | -8.615850e-47 |
| Msa0755090 | Msa1368980 | 0.815029 | 1.139482e-51 | -8.615850e-47 |
| Msa0755090 | Msa1370930 | -0.836474 | 9.162147e-57 | -8.615850e-47 |
| Msa0755090 | Msa1378460 | 0.814967 | 1.176552e-51 | -8.615850e-47 |
| Msa0755090 | Msa1378470 | 0.827998 | 1.147516e-54 | -8.615850e-47 |
| Msa0755090 | Msa1383480 | 0.821584 | 3.736049e-53 | -8.615850e-47 |
| Msa0755090 | Msa1395750 | 0.803279 | 3.761369e-49 | -8.615850e-47 |
| Msa0755090 | Msa1397970 | 0.823212 | 1.564534e-53 | -8.615850e-47 |
| Msa0755090 | Msa1403950 | 0.832844 | 7.498199e-56 | -8.615850e-47 |
| Msa0755090 | Msa1407210 | -0.824325 | 8.582778e-54 | -8.615850e-47 |
| Msa0755090 | Msa1427830 | 0.815389 | 9.480913e-52 | -8.615850e-47 |
| Msa0755090 | Msa1434660 | 0.817000 | 4.137209e-52 | -8.615850e-47 |
| Msa0755090 | Msa1450980 | 0.825032 | 5.846928e-54 | -8.615850e-47 |
| Msa0755090 | Msa1454110 | 0.828727 | 7.656104e-55 | -8.615850e-47 |
| Msa0125440 | Msa0755090 | 0.810341 | 1.209525e-50 | -8.615850e-47 |
| Msa0132620 | Msa0755090 | 0.809899 | 1.506386e-50 | -8.615850e-47 |
| Msa0154240 | Msa0755090 | 0.840921 | 6.498604e-58 | -8.615850e-47 |
| Msa0154270 | Msa0755090 | 0.818445 | 1.953228e-52 | -8.615850e-47 |
| Msa0155610 | Msa0755090 | 0.824484 | 7.873621e-54 | -8.615850e-47 |
| Msa0159750 | Msa0755090 | 0.807893 | 4.045428e-50 | -8.615850e-47 |
| Msa0197180 | Msa0755090 | 0.804587 | 2.011059e-49 | -8.615850e-47 |
| Msa0198440 | Msa0755090 | 0.833634 | 4.765070e-56 | -8.615850e-47 |
| Msa0216210 | Msa0755090 | 0.800179 | 1.627162e-48 | -8.615850e-47 |
| Msa0223100 | Msa0755090 | 0.865856 | 4.360406e-65 | -8.615850e-47 |
| Msa0223290 | Msa0755090 | 0.856116 | 3.997571e-62 | -8.615850e-47 |
| Msa0223380 | Msa0755090 | 0.843578 | 1.285497e-58 | -8.615850e-47 |
| Msa0366870 | Msa0755090 | 0.801402 | 9.158051e-49 | -8.615850e-47 |
| Msa0368780 | Msa0755090 | 0.825495 | 4.544545e-54 | -8.615850e-47 |
| Msa0377280 | Msa0755090 | 0.833005 | 6.834268e-56 | -8.615850e-47 |
| Msa0379540 | Msa0755090 | 0.812856 | 3.434802e-51 | -8.615850e-47 |
| Msa0380430 | Msa0755090 | 0.802209 | 6.254291e-49 | -8.615850e-47 |
| Msa0389060 | Msa0755090 | 0.827568 | 1.456201e-54 | -8.615850e-47 |
| Msa0401340 | Msa0755090 | 0.843047 | 1.781590e-58 | -8.615850e-47 |
| Msa0404220 | Msa0755090 | 0.803494 | 3.393623e-49 | -8.615850e-47 |
| Msa0404690 | Msa0755090 | 0.832392 | 9.702307e-56 | -8.615850e-47 |
| Msa0414070 | Msa0755090 | 0.822999 | 1.753607e-53 | -8.615850e-47 |
| Msa0416060 | Msa0755090 | 0.812454 | 4.204835e-51 | -8.615850e-47 |
| Msa0416320 | Msa0755090 | 0.820076 | 8.303095e-53 | -8.615850e-47 |
| Msa0419620 | Msa0755090 | -0.811554 | 6.604998e-51 | -8.615850e-47 |
| Msa0431520 | Msa0755090 | 0.828771 | 7.468869e-55 | -8.615850e-47 |
| Msa0431830 | Msa0755090 | 0.837343 | 5.497569e-57 | -8.615850e-47 |
| Msa0448080 | Msa0755090 | 0.829678 | 4.499545e-55 | -8.615850e-47 |
| Msa0448120 | Msa0755090 | 0.868762 | 5.129181e-66 | -8.615850e-47 |
| Msa0462590 | Msa0755090 | 0.837517 | 4.961823e-57 | -8.615850e-47 |
| Msa0240780 | Msa0755090 | 0.801932 | 7.131285e-49 | -8.615850e-47 |
| Msa0260190 | Msa0755090 | 0.809064 | 2.275360e-50 | -8.615850e-47 |
| Msa0265580 | Msa0755090 | 0.809812 | 1.572683e-50 | -8.615850e-47 |
| Msa0278670 | Msa0755090 | 0.831598 | 1.524304e-55 | -8.615850e-47 |
| Msa0282170 | Msa0755090 | 0.808817 | 2.570133e-50 | -8.615850e-47 |
| Msa0284870 | Msa0755090 | 0.806814 | 6.851932e-50 | -8.615850e-47 |
| Msa0288240 | Msa0755090 | 0.808999 | 2.350479e-50 | -8.615850e-47 |
| Msa0288320 | Msa0755090 | 0.801122 | 1.045002e-48 | -8.615850e-47 |
| Msa0302650 | Msa0755090 | 0.838266 | 3.184685e-57 | -8.615850e-47 |
| Msa0308770 | Msa0755090 | 0.810841 | 9.433883e-51 | -8.615850e-47 |
| Msa0316750 | Msa0755090 | 0.805362 | 1.384928e-49 | -8.615850e-47 |
| Msa0318070 | Msa0755090 | 0.838294 | 3.131725e-57 | -8.615850e-47 |
| Msa0318230 | Msa0755090 | 0.801308 | 9.575448e-49 | -8.615850e-47 |
| Msa0326670 | Msa0755090 | 0.815655 | 8.270616e-52 | -8.615850e-47 |
| Msa0336270 | Msa0755090 | 0.810722 | 1.000778e-50 | -8.615850e-47 |
| Msa0354390 | Msa0755090 | 0.820181 | 7.853570e-53 | -8.615850e-47 |
| Msa0357380 | Msa0755090 | 0.834506 | 2.882391e-56 | -8.615850e-47 |
| Msa0357390 | Msa0755090 | 0.841379 | 4.924276e-58 | -8.615850e-47 |
| Msa0362060 | Msa0755090 | 0.824773 | 6.729579e-54 | -8.615850e-47 |
| Msa0505660 | Msa0755090 | 0.816233 | 6.145188e-52 | -8.615850e-47 |
| Msa0530380 | Msa0755090 | 0.818416 | 1.982770e-52 | -8.615850e-47 |
| Msa0530950 | Msa0755090 | 0.828268 | 9.882214e-55 | -8.615850e-47 |
| Msa0553520 | Msa0755090 | 0.800368 | 1.488987e-48 | -8.615850e-47 |
| Msa0568610 | Msa0755090 | 0.808502 | 3.001148e-50 | -8.615850e-47 |
| Msa0577320 | Msa0755090 | -0.800457 | 1.428698e-48 | -8.615850e-47 |
| Msa0577870 | Msa0755090 | 0.818688 | 1.720454e-52 | -8.615850e-47 |
| Msa0579340 | Msa0755090 | 0.879781 | 9.410758e-70 | -8.615850e-47 |
| Msa0580540 | Msa0755090 | 0.840631 | 7.742440e-58 | -8.615850e-47 |
| Msa0581920 | Msa0755090 | 0.844944 | 5.524860e-59 | -8.615850e-47 |
| Msa0600820 | Msa0755090 | 0.804325 | 2.280157e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0755090 | MtrunA17_Chr5g0400001 | 97.606 | 543 | 13 | 0 | 1 | 543 | 1 | 543 | 0.0 | 1110 |
| Msa0755090 | MtrunA17_Chr5g0399991 | 91.927 | 545 | 40 | 2 | 1 | 543 | 1 | 543 | 0.0 | 1049 |
| Msa0755090 | MtrunA17_Chr4g0055281 | 74.364 | 550 | 125 | 4 | 1 | 543 | 1 | 541 | 0.0 | 852 |
| Msa0755090 | MtrunA17_Chr6g0481031 | 63.825 | 434 | 145 | 2 | 87 | 508 | 106 | 539 | 0.0 | 612 |
| Msa0755090 | MtrunA17_Chr4g0023601 | 50.115 | 435 | 200 | 4 | 85 | 505 | 11 | 442 | 2.34e-156 | 456 |
| Msa0755090 | MtrunA17_Chr2g0323051 | 50.229 | 436 | 200 | 4 | 84 | 505 | 83 | 515 | 1.62e-150 | 444 |
| Msa0755090 | MtrunA17_Chr8g0388651 | 46.943 | 458 | 224 | 7 | 72 | 512 | 61 | 516 | 2.29e-140 | 416 |
| Msa0755090 | MtrunA17_Chr7g0247631 | 46.035 | 454 | 228 | 6 | 65 | 505 | 243 | 692 | 1.29e-125 | 384 |
| Msa0755090 | MtrunA17_Chr2g0286431 | 39.866 | 449 | 257 | 5 | 74 | 517 | 70 | 510 | 9.97e-109 | 335 |
| Msa0755090 | MtrunA17_Chr5g0408851 | 37.422 | 481 | 279 | 10 | 42 | 508 | 172 | 644 | 1.01e-103 | 325 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0755090 | AT4G17090.1 | 70.290 | 552 | 151 | 7 | 1 | 543 | 1 | 548 | 0.0 | 810 |
| Msa0755090 | AT3G23920.1 | 59.796 | 490 | 178 | 4 | 34 | 508 | 56 | 541 | 0.0 | 613 |
| Msa0755090 | AT4G15210.1 | 48.853 | 436 | 205 | 5 | 85 | 505 | 12 | 444 | 4.28e-149 | 437 |
| Msa0755090 | AT4G15210.2 | 52.308 | 390 | 181 | 4 | 85 | 472 | 12 | 398 | 8.18e-147 | 429 |
| Msa0755090 | AT2G32290.1 | 48.506 | 435 | 208 | 5 | 84 | 505 | 75 | 506 | 4.15e-141 | 420 |
| Msa0755090 | AT4G00490.1 | 48.636 | 440 | 209 | 6 | 87 | 513 | 95 | 530 | 1.30e-140 | 417 |
| Msa0755090 | AT4G15210.3 | 49.492 | 394 | 182 | 4 | 126 | 505 | 1 | 391 | 1.77e-138 | 408 |
| Msa0755090 | AT4G15210.4 | 49.492 | 394 | 182 | 4 | 126 | 505 | 1 | 391 | 1.77e-138 | 408 |
| Msa0755090 | AT5G55700.1 | 44.292 | 438 | 227 | 4 | 86 | 506 | 91 | 528 | 9.06e-132 | 394 |
| Msa0755090 | AT2G45880.1 | 44.796 | 442 | 227 | 6 | 74 | 502 | 235 | 672 | 1.39e-122 | 376 |
| Msa0755090 | AT5G45300.2 | 39.819 | 442 | 248 | 8 | 79 | 508 | 245 | 680 | 2.89e-100 | 318 |
| Msa0755090 | AT5G45300.1 | 39.819 | 442 | 248 | 8 | 79 | 508 | 247 | 682 | 2.97e-100 | 318 |
| Msa0755090 | AT5G45300.3 | 39.819 | 442 | 248 | 8 | 79 | 508 | 261 | 696 | 3.48e-100 | 318 |
| Msa0755090 | AT5G55700.2 | 45.566 | 327 | 165 | 3 | 193 | 506 | 39 | 365 | 2.67e-99 | 305 |
| Msa0755090 | AT5G18670.1 | 39.110 | 427 | 242 | 4 | 87 | 506 | 87 | 502 | 1.35e-91 | 291 |
Find 130 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACAGATTTACAGATTATT+TGG | 0.120196 | 5_2:-8856805 | Msa0755090:CDS |
| AAGAAGTATATTGATTTATT+AGG | 0.162007 | 5_2:-8855355 | Msa0755090:three_prime_UTR |
| CCAATGAATTCCAGCTATTT+TGG | 0.174268 | 5_2:+8855922 | None:intergenic |
| TTCCAAGTTCCATCAGTTTC+AGG | 0.191128 | 5_2:+8856368 | None:intergenic |
| CTAGTTTACACAGACAAATT+AGG | 0.217572 | 5_2:-8856930 | Msa0755090:CDS |
| CTTTATGTTGGACACATTAA+AGG | 0.225336 | 5_2:-8855467 | Msa0755090:CDS |
| ATGGTCCTATGAAATATAAT+TGG | 0.239981 | 5_2:-8857289 | Msa0755090:CDS |
| ACAGTATATGAGATCTTCTT+TGG | 0.254734 | 5_2:-8856179 | Msa0755090:intron |
| ACTTGTTTGAAATATGCTTT+TGG | 0.284260 | 5_2:+8855961 | None:intergenic |
| TGGACACATTAAAGGAATTA+AGG | 0.290030 | 5_2:-8855459 | Msa0755090:CDS |
| ACTTGGAAGTTTCCAGGAAT+TGG | 0.297749 | 5_2:-8856353 | Msa0755090:CDS |
| GGTTGATGCTTGGTGGGGTT+TGG | 0.299766 | 5_2:-8857321 | Msa0755090:CDS |
| GGAACATGGAACACAGAATA+TGG | 0.310195 | 5_2:-8856049 | Msa0755090:CDS |
| AGAAGTATATTGATTTATTA+GGG | 0.311275 | 5_2:-8855354 | Msa0755090:three_prime_UTR |
| AATCAATTTCCTGAGGATAC+TGG | 0.317015 | 5_2:-8856088 | Msa0755090:CDS |
| GGTTGCTTGAAGGTGAAAAT+TGG | 0.317020 | 5_2:-8855571 | Msa0755090:CDS |
| CATCCCAATGAGATGTATTC+AGG | 0.331249 | 5_2:+8856897 | None:intergenic |
| CTTGGTGTGCGTAGATAATT+TGG | 0.333865 | 5_2:-8855266 | Msa0755090:three_prime_UTR |
| CATTGGAATTCTCCAATTCC+TGG | 0.333977 | 5_2:+8856341 | None:intergenic |
| GATGGAACTTGGAAGTTTCC+AGG | 0.338985 | 5_2:-8856359 | Msa0755090:CDS |
| CACGTATTTCATCATGTTGA+TGG | 0.339637 | 5_2:-8855393 | Msa0755090:three_prime_UTR |
| CTTTCAAAATCTGATTCATA+TGG | 0.346178 | 5_2:-8855497 | Msa0755090:CDS |
| GAAGCATCAGCTGCAGCAAT+TGG | 0.348122 | 5_2:-8856157 | Msa0755090:CDS |
| ATGGAGATTTCTTCCTTGAT+TGG | 0.348721 | 5_2:-8856030 | Msa0755090:CDS |
| GTAGAGCAAACACTAAAATA+TGG | 0.350641 | 5_2:-8857717 | Msa0755090:exon |
| CATGGGTGCTTGAAGAAATA+AGG | 0.352882 | 5_2:-8856965 | Msa0755090:CDS |
| GAAATGTTGGTGACTCTTGC+AGG | 0.358515 | 5_2:-8857184 | Msa0755090:intron |
| TTTGCTAGCATTTGTGCTAT+TGG | 0.361586 | 5_2:+8855824 | None:intergenic |
| GGTGAACAATTAGCATGATT+AGG | 0.375380 | 5_2:+8855749 | None:intergenic |
| GACAGATTTACAGATTATTT+GGG | 0.378560 | 5_2:-8856804 | Msa0755090:CDS |
| CCCATTGTTACCGTGTCTAA+TGG | 0.379739 | 5_2:+8857419 | None:intergenic |
| TAGTTTACACAGACAAATTA+GGG | 0.386153 | 5_2:-8856929 | Msa0755090:CDS |
| AGATATGATTCAAGTGCTTA+TGG | 0.392336 | 5_2:-8855650 | Msa0755090:CDS |
| GCTTCCCAATTATATTTCAT+AGG | 0.393239 | 5_2:+8857284 | None:intergenic |
| TTGTCTGTGTAAACTAGCTC+AGG | 0.393606 | 5_2:+8856936 | None:intergenic |
| CAGTTAAGGAAAACAAGAAA+TGG | 0.402206 | 5_2:-8857517 | Msa0755090:CDS |
| CATATCTAAGAATAAATAAG+AGG | 0.406737 | 5_2:-8855592 | Msa0755090:CDS |
| AGCAATGAATGCTAGTTTGA+TGG | 0.408306 | 5_2:-8857375 | Msa0755090:CDS |
| CCAAAATAGCTGGAATTCAT+TGG | 0.410744 | 5_2:-8855922 | Msa0755090:CDS |
| TGAAAATTGGAGGCAATTTG+TGG | 0.420878 | 5_2:-8855558 | Msa0755090:CDS |
| CAGGAAATTCAAGTGGGACT+AGG | 0.423979 | 5_2:-8856422 | Msa0755090:CDS |
| TATGGAACTGATCTTTATGT+TGG | 0.435975 | 5_2:-8855479 | Msa0755090:CDS |
| GAATCCTGAATACATCTCAT+TGG | 0.440984 | 5_2:-8856901 | Msa0755090:CDS |
| ACTTGCTGGTGAGAATGCTT+TGG | 0.442476 | 5_2:-8855675 | Msa0755090:CDS |
| AAACACCAACTCTACAGTTA+AGG | 0.445155 | 5_2:-8857531 | Msa0755090:CDS |
| CAGCAATTGGGAAGAAAGAA+TGG | 0.447375 | 5_2:-8856144 | Msa0755090:CDS |
| GGAGTTCTTCCTGCTAGAAC+AGG | 0.447514 | 5_2:+8856864 | None:intergenic |
| TCCAAGTTCCATCAGTTTCA+GGG | 0.453104 | 5_2:+8856369 | None:intergenic |
| TTTCACATGCATGGAAATGA+AGG | 0.453930 | 5_2:-8855783 | Msa0755090:CDS |
| ACGGAAGCTTCTCATGTAAT+CGG | 0.454119 | 5_2:+8856827 | None:intergenic |
| AAACTATCTGCCAAAATAGC+TGG | 0.456022 | 5_2:-8855932 | Msa0755090:CDS |
| TTTGTACCTTGTCATAGCAT+TGG | 0.457100 | 5_2:+8856324 | None:intergenic |
| ACTTGATTAACCAATCCTTC+TGG | 0.458432 | 5_2:+8855728 | None:intergenic |
| AAGATGGCAACAAAGATTGC+AGG | 0.463188 | 5_2:-8855704 | Msa0755090:CDS |
| CCATCAGTTTCAGGGTAAGA+TGG | 0.465255 | 5_2:+8856377 | None:intergenic |
| TTGAAGAGTGCTGGAGTTGA+AGG | 0.475342 | 5_2:-8857350 | Msa0755090:CDS |
| TGGTCCTATGAAATATAATT+GGG | 0.475409 | 5_2:-8857288 | Msa0755090:CDS |
| CTTATTTCTTCAAGCACCCA+TGG | 0.475790 | 5_2:+8856966 | None:intergenic |
| AGTAATGGTTGATGCTTGGT+GGG | 0.476693 | 5_2:-8857327 | Msa0755090:CDS |
| AATCCTGAATACATCTCATT+GGG | 0.477122 | 5_2:-8856900 | Msa0755090:CDS |
| ACCACCAACATTATTGAGCT+TGG | 0.478629 | 5_2:-8855284 | Msa0755090:three_prime_UTR |
| ATTGCAGGTGGTGAACTTGC+TGG | 0.483856 | 5_2:-8855689 | Msa0755090:CDS |
| ATAAATAAGAGGTTGCTTGA+AGG | 0.486643 | 5_2:-8855581 | Msa0755090:CDS |
| TATACTAAATTTCACATGCA+TGG | 0.487819 | 5_2:-8855792 | Msa0755090:CDS |
| ACCCTGAAACTGATGGAACT+TGG | 0.491404 | 5_2:-8856370 | Msa0755090:CDS |
| ATTGGTTAATCAAGTGAAGA+TGG | 0.500028 | 5_2:-8855720 | Msa0755090:CDS |
| TAATTGTTCACCAGAAGGAT+TGG | 0.500260 | 5_2:-8855738 | Msa0755090:CDS |
| AGTTAAGGAAAACAAGAAAT+GGG | 0.500489 | 5_2:-8857516 | Msa0755090:CDS |
| TCAAGCACCCATGGTGGTAG+AGG | 0.503079 | 5_2:+8856975 | None:intergenic |
| CCATTAGACACGGTAACAAT+GGG | 0.505572 | 5_2:-8857419 | Msa0755090:CDS |
| AAAAGCATATTTCAAACAAG+TGG | 0.507306 | 5_2:-8855959 | Msa0755090:CDS |
| GAGTAATGGTTGATGCTTGG+TGG | 0.507394 | 5_2:-8857328 | Msa0755090:CDS |
| TTGATGGCATTGAAGAGTGC+TGG | 0.508850 | 5_2:-8857359 | Msa0755090:CDS |
| CATCAATGTGGTGGAAATGT+TGG | 0.516528 | 5_2:-8857197 | Msa0755090:CDS |
| TTATGCTGAGCTTGTTCAGA+TGG | 0.518500 | 5_2:-8857261 | Msa0755090:CDS |
| AGCAATTGGGAAGAAAGAAT+GGG | 0.525174 | 5_2:-8856143 | Msa0755090:CDS |
| GTAATGGTTGATGCTTGGTG+GGG | 0.525670 | 5_2:-8857326 | Msa0755090:CDS |
| GATTCAGTGCCTGTTCTAGC+AGG | 0.529878 | 5_2:-8856873 | Msa0755090:CDS |
| AAGCATCAGCTGCAGCAATT+GGG | 0.535892 | 5_2:-8856156 | Msa0755090:CDS |
| ATTGTATTGACCTGAGTCAT+GGG | 0.537737 | 5_2:+8856108 | None:intergenic |
| CCATCTTACCCTGAAACTGA+TGG | 0.538520 | 5_2:-8856377 | Msa0755090:CDS |
| GCCATTAGACACGGTAACAA+TGG | 0.539108 | 5_2:-8857420 | Msa0755090:CDS |
| TAATCGGAGTAGACTTGAAG+TGG | 0.544728 | 5_2:+8856843 | None:intergenic |
| TGCTGGAGTTGAAGGAGTAA+TGG | 0.546595 | 5_2:-8857342 | Msa0755090:CDS |
| TGCTTGAAGGTGAAAATTGG+AGG | 0.550977 | 5_2:-8855568 | Msa0755090:CDS |
| CATGCAACTGAATTAACTGC+AGG | 0.552789 | 5_2:-8855881 | Msa0755090:CDS |
| GTTTGCTTGAGTACCAATCA+AGG | 0.552816 | 5_2:+8856017 | None:intergenic |
| TATAACACAAGGTTTCATGA+TGG | 0.559816 | 5_2:-8855854 | Msa0755090:CDS |
| CTGCAGGTTACTATAACACA+AGG | 0.561651 | 5_2:-8855865 | Msa0755090:CDS |
| TAGCATTCCTCTACCACCAT+GGG | 0.563387 | 5_2:-8856982 | Msa0755090:CDS |
| AAGGAGTAATGGTTGATGCT+TGG | 0.565190 | 5_2:-8857331 | Msa0755090:CDS |
| ACACAGACAAATTAGGGAGG+AGG | 0.571216 | 5_2:-8856923 | Msa0755090:CDS |
| GATTGTATTGACCTGAGTCA+TGG | 0.571442 | 5_2:+8856107 | None:intergenic |
| CACACCAAGCTCAATAATGT+TGG | 0.572891 | 5_2:+8855280 | None:intergenic |
| CATGCTAATTGTTCACCAGA+AGG | 0.574244 | 5_2:-8855743 | Msa0755090:CDS |
| ACCAAGCTCAATAATGTTGG+TGG | 0.576937 | 5_2:+8855283 | None:intergenic |
| GCACAAATGCTAGCAAAACA+TGG | 0.581514 | 5_2:-8855818 | Msa0755090:CDS |
| TTTGCTTTGAGATGAAACAA+AGG | 0.587033 | 5_2:+8857587 | None:intergenic |
| AATAATCTGTAAATCTGTCA+CGG | 0.588821 | 5_2:+8856808 | None:intergenic |
| AAGAAAGAATGGGGAACAAG+TGG | 0.590370 | 5_2:-8856133 | Msa0755090:CDS |
| ATGTTGATGGATCATGTGTA+TGG | 0.592754 | 5_2:-8855380 | Msa0755090:three_prime_UTR |
| TTGTTTGCAGGAAATTCAAG+TGG | 0.593690 | 5_2:-8856429 | Msa0755090:intron |
| ACAAGTGGACCCCATGACTC+AGG | 0.595412 | 5_2:-8856118 | Msa0755090:CDS |
| TGTCTGTGTAAACTAGCTCA+GGG | 0.595938 | 5_2:+8856937 | None:intergenic |
| GGATATCTCAACTCCCCACA+TGG | 0.597220 | 5_2:+8856398 | None:intergenic |
| TGCTGATTCGAATAGAGTAC+CGG | 0.599220 | 5_2:-8857456 | Msa0755090:CDS |
| AAGTGGGACTAGGTCCATGT+GGG | 0.602013 | 5_2:-8856412 | Msa0755090:CDS |
| TTTGTTGTGAGTATGTCTGA+TGG | 0.609724 | 5_2:-8855533 | Msa0755090:CDS |
| GGTGTGCGTAGATAATTTGG+TGG | 0.616254 | 5_2:-8855263 | Msa0755090:three_prime_UTR |
| TCAAGCAAACTTGTTGAACA+TGG | 0.618498 | 5_2:-8856004 | Msa0755090:CDS |
| ATAGCATTCCTCTACCACCA+TGG | 0.632237 | 5_2:-8856983 | Msa0755090:intron |
| GTGTGCGTAGATAATTTGGT+GGG | 0.632548 | 5_2:-8855262 | Msa0755090:three_prime_UTR |
| GTTGTGAGTATGTCTGATGG+TGG | 0.636973 | 5_2:-8855530 | Msa0755090:CDS |
| TGTTTGCAGGAAATTCAAGT+GGG | 0.637360 | 5_2:-8856428 | Msa0755090:intron |
| CAAGTGGGACTAGGTCCATG+TGG | 0.641124 | 5_2:-8856413 | Msa0755090:CDS |
| TCGTGGTTATGAGCAATCGA+TGG | 0.660833 | 5_2:+8857479 | None:intergenic |
| AATGGCAACATCACAAACAC+CGG | 0.660873 | 5_2:+8857437 | None:intergenic |
| TTGTATTGACCTGAGTCATG+GGG | 0.665755 | 5_2:+8856109 | None:intergenic |
| TTAGACACGGTAACAATGGG+AGG | 0.667348 | 5_2:-8857416 | Msa0755090:CDS |
| GCAAGAAACACATTTCACAA+AGG | 0.674864 | 5_2:-8857555 | Msa0755090:CDS |
| ATGGCAACAAAGATTGCAGG+TGG | 0.675921 | 5_2:-8855701 | Msa0755090:CDS |
| CTCTATTCGAATCAGCATCG+TGG | 0.679739 | 5_2:+8857462 | None:intergenic |
| TCAATACAATCAATTTCCTG+AGG | 0.679778 | 5_2:-8856095 | Msa0755090:CDS |
| AGAATTCCAATGCTATGACA+AGG | 0.689937 | 5_2:-8856330 | Msa0755090:intron |
| GCAATTGGGAAGAAAGAATG+GGG | 0.692825 | 5_2:-8856142 | Msa0755090:CDS |
| TGTCTGATGGTGGTAAACCA+AGG | 0.696376 | 5_2:-8855520 | Msa0755090:CDS |
| TGTGATGTTGCCATTAGACA+CGG | 0.702107 | 5_2:-8857429 | Msa0755090:CDS |
| TTTACACAGACAAATTAGGG+AGG | 0.705030 | 5_2:-8856926 | Msa0755090:CDS |
| AGTGGGACTAGGTCCATGTG+GGG | 0.709601 | 5_2:-8856411 | Msa0755090:CDS |
| ATTTCTTCAAGCACCCATGG+TGG | 0.717661 | 5_2:+8856969 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTCTTAGATTTTTTATTTT+TGG | + | chr5_2:8855948-8855967 | None:intergenic | 15.0% |
| !!! | TAAAAAATCTAAGACTAATT+TGG | - | chr5_2:8855952-8855971 | Msa0755090:CDS | 15.0% |
| !!! | TTTATAAGATGAATACTTTT+TGG | - | chr5_2:8856455-8856474 | Msa0755090:intron | 15.0% |
| !!! | TTATAAGATGAATACTTTTT+GGG | - | chr5_2:8856456-8856475 | Msa0755090:intron | 15.0% |
| !!! | AAGAAGTATATTGATTTATT+AGG | - | chr5_2:8857618-8857637 | Msa0755090:CDS | 15.0% |
| !!! | AGAAGTATATTGATTTATTA+GGG | - | chr5_2:8857619-8857638 | Msa0755090:CDS | 15.0% |
| !!! | TGAAACAAAGGTTTAATTTT+TGG | + | chr5_2:8855377-8855396 | None:intergenic | 20.0% |
| !!! | TGTTTGAAAATAAGTCATTT+TGG | + | chr5_2:8856777-8856796 | None:intergenic | 20.0% |
| !! | CATATCTAAGAATAAATAAG+AGG | - | chr5_2:8857381-8857400 | Msa0755090:CDS | 20.0% |
| !!! | TGTTTCTATTTTGTGAATGA+AGG | + | chr5_2:8855306-8855325 | None:intergenic | 25.0% |
| ! | AGTTAAGGAAAACAAGAAAT+GGG | - | chr5_2:8855457-8855476 | Msa0755090:CDS | 25.0% |
| ! | ATGGTCCTATGAAATATAAT+TGG | - | chr5_2:8855684-8855703 | Msa0755090:CDS | 25.0% |
| ! | TGGTCCTATGAAATATAATT+GGG | - | chr5_2:8855685-8855704 | Msa0755090:CDS | 25.0% |
| ! | ATAATATTCAACCACCAATT+TGG | - | chr5_2:8855838-8855857 | Msa0755090:CDS | 25.0% |
| ! | TAATATTCAACCACCAATTT+GGG | - | chr5_2:8855839-8855858 | Msa0755090:CDS | 25.0% |
| ! | GAATGTAACAACTATTAACT+TGG | + | chr5_2:8855874-8855893 | None:intergenic | 25.0% |
| ! | TAGTTTACACAGACAAATTA+GGG | - | chr5_2:8856044-8856063 | Msa0755090:CDS | 25.0% |
| ! | AATAATCTGTAAATCTGTCA+CGG | + | chr5_2:8856168-8856187 | None:intergenic | 25.0% |
| ! | TGACAGATTTACAGATTATT+TGG | - | chr5_2:8856168-8856187 | Msa0755090:CDS | 25.0% |
| ! | GACAGATTTACAGATTATTT+GGG | - | chr5_2:8856169-8856188 | Msa0755090:CDS | 25.0% |
| ! | ACAAAATTGAATTATGAGCT+AGG | + | chr5_2:8856431-8856450 | None:intergenic | 25.0% |
| ! | ATGATGATAAAACTAAGACT+TGG | - | chr5_2:8856490-8856509 | Msa0755090:intron | 25.0% |
| !! | GTCGAACATTAATATGATTT+TGG | + | chr5_2:8856711-8856730 | None:intergenic | 25.0% |
| !!! | ACTTGTTTGAAATATGCTTT+TGG | + | chr5_2:8857015-8857034 | None:intergenic | 25.0% |
| !! | AAAAGCATATTTCAAACAAG+TGG | - | chr5_2:8857014-8857033 | Msa0755090:intron | 25.0% |
| ! | TATACTAAATTTCACATGCA+TGG | - | chr5_2:8857181-8857200 | Msa0755090:intron | 25.0% |
| ! | CTTTCAAAATCTGATTCATA+TGG | - | chr5_2:8857476-8857495 | Msa0755090:CDS | 25.0% |
| GTAGAGCAAACACTAAAATA+TGG | - | chr5_2:8855256-8855275 | Msa0755090:three_prime_UTR | 30.0% | |
| ! | TTTTGGACAAGAAACTTTGT+TGG | + | chr5_2:8855360-8855379 | None:intergenic | 30.0% |
| !! | TTTGCTTTGAGATGAAACAA+AGG | + | chr5_2:8855389-8855408 | None:intergenic | 30.0% |
| CAGTTAAGGAAAACAAGAAA+TGG | - | chr5_2:8855456-8855475 | Msa0755090:CDS | 30.0% | |
| GCTTCCCAATTATATTTCAT+AGG | + | chr5_2:8855692-8855711 | None:intergenic | 30.0% | |
| ! | GTTATGTCTTTTCATCAATG+TGG | - | chr5_2:8855764-8855783 | Msa0755090:CDS | 30.0% |
| CTAGTTTACACAGACAAATT+AGG | - | chr5_2:8856043-8856062 | Msa0755090:CDS | 30.0% | |
| AATCCTGAATACATCTCATT+GGG | - | chr5_2:8856073-8856092 | Msa0755090:CDS | 30.0% | |
| ! | GTATCTAAGACGTTACAATA+AGG | + | chr5_2:8856362-8856381 | None:intergenic | 30.0% |
| ATTAAGACCAAATTGTTTGC+AGG | - | chr5_2:8856532-8856551 | Msa0755090:intron | 30.0% | |
| TGAATTTCCTGCAAACAATT+TGG | + | chr5_2:8856542-8856561 | None:intergenic | 30.0% | |
| ACAGTATATGAGATCTTCTT+TGG | - | chr5_2:8856794-8856813 | Msa0755090:CDS | 30.0% | |
| TCAATACAATCAATTTCCTG+AGG | - | chr5_2:8856878-8856897 | Msa0755090:CDS | 30.0% | |
| !! | ACTGGATTTTTCAAAAGAGA+AGG | - | chr5_2:8856903-8856922 | Msa0755090:CDS | 30.0% |
| ! | TTTTCAAAAGAGAAGGAACA+TGG | - | chr5_2:8856910-8856929 | Msa0755090:CDS | 30.0% |
| TATAACACAAGGTTTCATGA+TGG | - | chr5_2:8857119-8857138 | Msa0755090:intron | 30.0% | |
| ATTGGTTAATCAAGTGAAGA+TGG | - | chr5_2:8857253-8857272 | Msa0755090:CDS | 30.0% | |
| AGATATGATTCAAGTGCTTA+TGG | - | chr5_2:8857323-8857342 | Msa0755090:CDS | 30.0% | |
| ATAAATAAGAGGTTGCTTGA+AGG | - | chr5_2:8857392-8857411 | Msa0755090:CDS | 30.0% | |
| TATGGAACTGATCTTTATGT+TGG | - | chr5_2:8857494-8857513 | Msa0755090:CDS | 30.0% | |
| CTTTATGTTGGACACATTAA+AGG | - | chr5_2:8857506-8857525 | Msa0755090:CDS | 30.0% | |
| TGGACACATTAAAGGAATTA+AGG | - | chr5_2:8857514-8857533 | Msa0755090:CDS | 30.0% | |
| GCAAGAAACACATTTCACAA+AGG | - | chr5_2:8855418-8855437 | Msa0755090:exon | 35.0% | |
| AAACACCAACTCTACAGTTA+AGG | - | chr5_2:8855442-8855461 | Msa0755090:CDS | 35.0% | |
| ! | GTTTTCCTTAACTGTAGAGT+TGG | + | chr5_2:8855450-8855469 | None:intergenic | 35.0% |
| ! | AGCAATGAATGCTAGTTTGA+TGG | - | chr5_2:8855598-8855617 | Msa0755090:CDS | 35.0% |
| GTTCAGATGGTACAAAAACA+TGG | - | chr5_2:8855725-8855744 | Msa0755090:CDS | 35.0% | |
| ! | ATGTCTTTTCATCAATGTGG+TGG | - | chr5_2:8855767-8855786 | Msa0755090:CDS | 35.0% |
| !! | TTTTTGGTCTAGCAAGACTA+TGG | + | chr5_2:8855932-8855951 | None:intergenic | 35.0% |
| TTTACACAGACAAATTAGGG+AGG | - | chr5_2:8856047-8856066 | Msa0755090:CDS | 35.0% | |
| GAATCCTGAATACATCTCAT+TGG | - | chr5_2:8856072-8856091 | Msa0755090:CDS | 35.0% | |
| !!! | CTTCAGTTTTGAGGTTAGAT+GGG | - | chr5_2:8856229-8856248 | Msa0755090:intron | 35.0% |
| AGATGGGTGATTAAGATACT+TGG | - | chr5_2:8856245-8856264 | Msa0755090:intron | 35.0% | |
| TTGTTTGCAGGAAATTCAAG+TGG | - | chr5_2:8856544-8856563 | Msa0755090:intron | 35.0% | |
| TGTTTGCAGGAAATTCAAGT+GGG | - | chr5_2:8856545-8856564 | Msa0755090:intron | 35.0% | |
| AGAATTCCAATGCTATGACA+AGG | - | chr5_2:8856643-8856662 | Msa0755090:intron | 35.0% | |
| TTTGTACCTTGTCATAGCAT+TGG | + | chr5_2:8856652-8856671 | None:intergenic | 35.0% | |
| AGCAATTGGGAAGAAAGAAT+GGG | - | chr5_2:8856830-8856849 | Msa0755090:CDS | 35.0% | |
| ! | ATTGTATTGACCTGAGTCAT+GGG | + | chr5_2:8856868-8856887 | None:intergenic | 35.0% |
| AATCAATTTCCTGAGGATAC+TGG | - | chr5_2:8856885-8856904 | Msa0755090:CDS | 35.0% | |
| TTGAAAAATCCAGTATCCTC+AGG | + | chr5_2:8856897-8856916 | None:intergenic | 35.0% | |
| ATGGAGATTTCTTCCTTGAT+TGG | - | chr5_2:8856943-8856962 | Msa0755090:CDS | 35.0% | |
| !! | TCAAGCAAACTTGTTGAACA+TGG | - | chr5_2:8856969-8856988 | Msa0755090:CDS | 35.0% |
| !! | ATATGCTTTTGGCTGATACA+AGG | + | chr5_2:8857004-8857023 | None:intergenic | 35.0% |
| AAACTATCTGCCAAAATAGC+TGG | - | chr5_2:8857041-8857060 | Msa0755090:intron | 35.0% | |
| ! | CCAATGAATTCCAGCTATTT+TGG | + | chr5_2:8857054-8857073 | None:intergenic | 35.0% |
| CCAAAATAGCTGGAATTCAT+TGG | - | chr5_2:8857051-8857070 | Msa0755090:intron | 35.0% | |
| TTTGCTAGCATTTGTGCTAT+TGG | + | chr5_2:8857152-8857171 | None:intergenic | 35.0% | |
| TTTCACATGCATGGAAATGA+AGG | - | chr5_2:8857190-8857209 | Msa0755090:CDS | 35.0% | |
| GGTGAACAATTAGCATGATT+AGG | + | chr5_2:8857227-8857246 | None:intergenic | 35.0% | |
| TAATTGTTCACCAGAAGGAT+TGG | - | chr5_2:8857235-8857254 | Msa0755090:CDS | 35.0% | |
| ACTTGATTAACCAATCCTTC+TGG | + | chr5_2:8857248-8857267 | None:intergenic | 35.0% | |
| TGAAAATTGGAGGCAATTTG+TGG | - | chr5_2:8857415-8857434 | Msa0755090:CDS | 35.0% | |
| ! | TTTGTTGTGAGTATGTCTGA+TGG | - | chr5_2:8857440-8857459 | Msa0755090:CDS | 35.0% |
| !! | GAATCAGATTTTGAAAGCCT+TGG | + | chr5_2:8857473-8857492 | None:intergenic | 35.0% |
| CACGTATTTCATCATGTTGA+TGG | - | chr5_2:8857580-8857599 | Msa0755090:CDS | 35.0% | |
| ! | ATGTTGATGGATCATGTGTA+TGG | - | chr5_2:8857593-8857612 | Msa0755090:CDS | 35.0% |
| !! | TGCTGATTCGAATAGAGTAC+CGG | - | chr5_2:8855517-8855536 | Msa0755090:CDS | 40.0% |
| AATGGCAACATCACAAACAC+CGG | + | chr5_2:8855539-8855558 | None:intergenic | 40.0% | |
| TGTGATGTTGCCATTAGACA+CGG | - | chr5_2:8855544-8855563 | Msa0755090:CDS | 40.0% | |
| CCATTAGACACGGTAACAAT+GGG | - | chr5_2:8855554-8855573 | Msa0755090:CDS | 40.0% | |
| ! | AAGGAGTAATGGTTGATGCT+TGG | - | chr5_2:8855642-8855661 | Msa0755090:CDS | 40.0% |
| ! | AGTAATGGTTGATGCTTGGT+GGG | - | chr5_2:8855646-8855665 | Msa0755090:CDS | 40.0% |
| ! | TGGGGTTTGGTTGAAAAAGA+TGG | - | chr5_2:8855665-8855684 | Msa0755090:CDS | 40.0% |
| ! | TTATGCTGAGCTTGTTCAGA+TGG | - | chr5_2:8855712-8855731 | Msa0755090:CDS | 40.0% |
| ! | CATCAATGTGGTGGAAATGT+TGG | - | chr5_2:8855776-8855795 | Msa0755090:CDS | 40.0% |
| TTGGCAAATAGAGCCCAAAT+TGG | + | chr5_2:8855855-8855874 | None:intergenic | 40.0% | |
| ! | CTTATTTCTTCAAGCACCCA+TGG | + | chr5_2:8856010-8856029 | None:intergenic | 40.0% |
| CATGGGTGCTTGAAGAAATA+AGG | - | chr5_2:8856008-8856027 | Msa0755090:CDS | 40.0% | |
| TGTCTGTGTAAACTAGCTCA+GGG | + | chr5_2:8856039-8856058 | None:intergenic | 40.0% | |
| TTGTCTGTGTAAACTAGCTC+AGG | + | chr5_2:8856040-8856059 | None:intergenic | 40.0% | |
| CATCCCAATGAGATGTATTC+AGG | + | chr5_2:8856079-8856098 | None:intergenic | 40.0% | |
| TAATCGGAGTAGACTTGAAG+TGG | + | chr5_2:8856133-8856152 | None:intergenic | 40.0% | |
| ACGGAAGCTTCTCATGTAAT+CGG | + | chr5_2:8856149-8856168 | None:intergenic | 40.0% | |
| ! | CAACTTGTGCTTCAGTTTTG+AGG | - | chr5_2:8856220-8856239 | Msa0755090:intron | 40.0% |
| !!! | GCTTCAGTTTTGAGGTTAGA+TGG | - | chr5_2:8856228-8856247 | Msa0755090:intron | 40.0% |
| TCCAAGTTCCATCAGTTTCA+GGG | + | chr5_2:8856607-8856626 | None:intergenic | 40.0% | |
| TTCCAAGTTCCATCAGTTTC+AGG | + | chr5_2:8856608-8856627 | None:intergenic | 40.0% | |
| ACTTGGAAGTTTCCAGGAAT+TGG | - | chr5_2:8856620-8856639 | Msa0755090:intron | 40.0% | |
| CATTGGAATTCTCCAATTCC+TGG | + | chr5_2:8856635-8856654 | None:intergenic | 40.0% | |
| CAGCAATTGGGAAGAAAGAA+TGG | - | chr5_2:8856829-8856848 | Msa0755090:CDS | 40.0% | |
| GCAATTGGGAAGAAAGAATG+GGG | - | chr5_2:8856831-8856850 | Msa0755090:CDS | 40.0% | |
| AAGAAAGAATGGGGAACAAG+TGG | - | chr5_2:8856840-8856859 | Msa0755090:CDS | 40.0% | |
| ! | TTGTATTGACCTGAGTCATG+GGG | + | chr5_2:8856867-8856886 | None:intergenic | 40.0% |
| ! | GATTGTATTGACCTGAGTCA+TGG | + | chr5_2:8856869-8856888 | None:intergenic | 40.0% |
| GGAACATGGAACACAGAATA+TGG | - | chr5_2:8856924-8856943 | Msa0755090:CDS | 40.0% | |
| GTTTGCTTGAGTACCAATCA+AGG | + | chr5_2:8856959-8856978 | None:intergenic | 40.0% | |
| CATGCAACTGAATTAACTGC+AGG | - | chr5_2:8857092-8857111 | Msa0755090:intron | 40.0% | |
| CTGCAGGTTACTATAACACA+AGG | - | chr5_2:8857108-8857127 | Msa0755090:intron | 40.0% | |
| GCACAAATGCTAGCAAAACA+TGG | - | chr5_2:8857155-8857174 | Msa0755090:intron | 40.0% | |
| CATGCTAATTGTTCACCAGA+AGG | - | chr5_2:8857230-8857249 | Msa0755090:CDS | 40.0% | |
| AAGATGGCAACAAAGATTGC+AGG | - | chr5_2:8857269-8857288 | Msa0755090:CDS | 40.0% | |
| !! | GGTCAAGTTTTGTCAACAAG+TGG | - | chr5_2:8857344-8857363 | Msa0755090:CDS | 40.0% |
| GGTTGCTTGAAGGTGAAAAT+TGG | - | chr5_2:8857402-8857421 | Msa0755090:CDS | 40.0% | |
| TGCTTGAAGGTGAAAATTGG+AGG | - | chr5_2:8857405-8857424 | Msa0755090:CDS | 40.0% | |
| ACCACCAACATTATTGAGCT+TGG | - | chr5_2:8857689-8857708 | Msa0755090:CDS | 40.0% | |
| ACCAAGCTCAATAATGTTGG+TGG | + | chr5_2:8857693-8857712 | None:intergenic | 40.0% | |
| CACACCAAGCTCAATAATGT+TGG | + | chr5_2:8857696-8857715 | None:intergenic | 40.0% | |
| ! | CTTGGTGTGCGTAGATAATT+TGG | - | chr5_2:8857707-8857726 | Msa0755090:exon | 40.0% |
| GTGTGCGTAGATAATTTGGT+GGG | - | chr5_2:8857711-8857730 | Msa0755090:exon | 40.0% | |
| TCGTGGTTATGAGCAATCGA+TGG | + | chr5_2:8855497-8855516 | None:intergenic | 45.0% | |
| CTCTATTCGAATCAGCATCG+TGG | + | chr5_2:8855514-8855533 | None:intergenic | 45.0% | |
| GCCATTAGACACGGTAACAA+TGG | - | chr5_2:8855553-8855572 | Msa0755090:CDS | 45.0% | |
| CCCATTGTTACCGTGTCTAA+TGG | + | chr5_2:8855557-8855576 | None:intergenic | 45.0% | |
| TTAGACACGGTAACAATGGG+AGG | - | chr5_2:8855557-8855576 | Msa0755090:CDS | 45.0% | |
| ! | TTGATGGCATTGAAGAGTGC+TGG | - | chr5_2:8855614-8855633 | Msa0755090:CDS | 45.0% |
| !! | TTGAAGAGTGCTGGAGTTGA+AGG | - | chr5_2:8855623-8855642 | Msa0755090:CDS | 45.0% |
| TGCTGGAGTTGAAGGAGTAA+TGG | - | chr5_2:8855631-8855650 | Msa0755090:CDS | 45.0% | |
| ! | GAGTAATGGTTGATGCTTGG+TGG | - | chr5_2:8855645-8855664 | Msa0755090:CDS | 45.0% |
| ! | GTAATGGTTGATGCTTGGTG+GGG | - | chr5_2:8855647-8855666 | Msa0755090:CDS | 45.0% |
| !! | GAAATGTTGGTGACTCTTGC+AGG | - | chr5_2:8855789-8855808 | Msa0755090:CDS | 45.0% |
| GCAAATAGAGCCCAAATTGG+TGG | + | chr5_2:8855852-8855871 | None:intergenic | 45.0% | |
| ATAGCATTCCTCTACCACCA+TGG | - | chr5_2:8855990-8856009 | Msa0755090:CDS | 45.0% | |
| TAGCATTCCTCTACCACCAT+GGG | - | chr5_2:8855991-8856010 | Msa0755090:CDS | 45.0% | |
| ATTTCTTCAAGCACCCATGG+TGG | + | chr5_2:8856007-8856026 | None:intergenic | 45.0% | |
| ACACAGACAAATTAGGGAGG+AGG | - | chr5_2:8856050-8856069 | Msa0755090:CDS | 45.0% | |
| CAGGAAATTCAAGTGGGACT+AGG | - | chr5_2:8856551-8856570 | Msa0755090:intron | 45.0% | |
| CCATCAGTTTCAGGGTAAGA+TGG | + | chr5_2:8856599-8856618 | None:intergenic | 45.0% | |
| CCATCTTACCCTGAAACTGA+TGG | - | chr5_2:8856596-8856615 | Msa0755090:intron | 45.0% | |
| ACCCTGAAACTGATGGAACT+TGG | - | chr5_2:8856603-8856622 | Msa0755090:intron | 45.0% | |
| GATGGAACTTGGAAGTTTCC+AGG | - | chr5_2:8856614-8856633 | Msa0755090:intron | 45.0% | |
| AAGCATCAGCTGCAGCAATT+GGG | - | chr5_2:8856817-8856836 | Msa0755090:CDS | 45.0% | |
| ATGGCAACAAAGATTGCAGG+TGG | - | chr5_2:8857272-8857291 | Msa0755090:CDS | 45.0% | |
| ! | ACTTGCTGGTGAGAATGCTT+TGG | - | chr5_2:8857298-8857317 | Msa0755090:CDS | 45.0% |
| GTTGTGAGTATGTCTGATGG+TGG | - | chr5_2:8857443-8857462 | Msa0755090:CDS | 45.0% | |
| !! | TGTCTGATGGTGGTAAACCA+AGG | - | chr5_2:8857453-8857472 | Msa0755090:CDS | 45.0% |
| GGTGTGCGTAGATAATTTGG+TGG | - | chr5_2:8857710-8857729 | Msa0755090:exon | 45.0% | |
| !!! | TTTTTTTTTTTTATATTTGT+TGG | - | chr5_2:8857646-8857665 | Msa0755090:CDS | 5.0% |
| GATTCAGTGCCTGTTCTAGC+AGG | - | chr5_2:8856100-8856119 | Msa0755090:CDS | 50.0% | |
| GGAGTTCTTCCTGCTAGAAC+AGG | + | chr5_2:8856112-8856131 | None:intergenic | 50.0% | |
| AAGTGGGACTAGGTCCATGT+GGG | - | chr5_2:8856561-8856580 | Msa0755090:intron | 50.0% | |
| GGATATCTCAACTCCCCACA+TGG | + | chr5_2:8856578-8856597 | None:intergenic | 50.0% | |
| ! | GAAGCATCAGCTGCAGCAAT+TGG | - | chr5_2:8856816-8856835 | Msa0755090:CDS | 50.0% |
| ATTGCAGGTGGTGAACTTGC+TGG | - | chr5_2:8857284-8857303 | Msa0755090:CDS | 50.0% | |
| ! | GGTTGATGCTTGGTGGGGTT+TGG | - | chr5_2:8855652-8855671 | Msa0755090:CDS | 55.0% |
| TCAAGCACCCATGGTGGTAG+AGG | + | chr5_2:8856001-8856020 | None:intergenic | 55.0% | |
| CAAGTGGGACTAGGTCCATG+TGG | - | chr5_2:8856560-8856579 | Msa0755090:intron | 55.0% | |
| AGTGGGACTAGGTCCATGTG+GGG | - | chr5_2:8856562-8856581 | Msa0755090:intron | 55.0% | |
| ACAAGTGGACCCCATGACTC+AGG | - | chr5_2:8856855-8856874 | Msa0755090:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 8855246 | 8857749 | 8855246 | ID=Msa0755090;Name=Msa0755090 |
| chr5_2 | mRNA | 8855246 | 8857749 | 8855246 | ID=Msa0755090-mRNA-1;Parent=Msa0755090;Name=Msa0755090-mRNA-1;_AED=0.29;_eAED=0.29;_QI=29|1|1|1|1|1|4|178|543 |
| chr5_2 | exon | 8855246 | 8856197 | 8855246 | ID=Msa0755090-mRNA-1:exon:4046;Parent=Msa0755090-mRNA-1 |
| chr5_2 | exon | 8856331 | 8856441 | 8856331 | ID=Msa0755090-mRNA-1:exon:4045;Parent=Msa0755090-mRNA-1 |
| chr5_2 | exon | 8856791 | 8857001 | 8856791 | ID=Msa0755090-mRNA-1:exon:4044;Parent=Msa0755090-mRNA-1 |
| chr5_2 | exon | 8857185 | 8857749 | 8857185 | ID=Msa0755090-mRNA-1:exon:4043;Parent=Msa0755090-mRNA-1 |
| chr5_2 | five_prime_UTR | 8857721 | 8857749 | 8857721 | ID=Msa0755090-mRNA-1:five_prime_utr;Parent=Msa0755090-mRNA-1 |
| chr5_2 | CDS | 8857185 | 8857720 | 8857185 | ID=Msa0755090-mRNA-1:cds;Parent=Msa0755090-mRNA-1 |
| chr5_2 | CDS | 8856791 | 8857001 | 8856791 | ID=Msa0755090-mRNA-1:cds;Parent=Msa0755090-mRNA-1 |
| chr5_2 | CDS | 8856331 | 8856441 | 8856331 | ID=Msa0755090-mRNA-1:cds;Parent=Msa0755090-mRNA-1 |
| chr5_2 | CDS | 8855424 | 8856197 | 8855424 | ID=Msa0755090-mRNA-1:cds;Parent=Msa0755090-mRNA-1 |
| chr5_2 | three_prime_UTR | 8855246 | 8855423 | 8855246 | ID=Msa0755090-mRNA-1:three_prime_utr;Parent=Msa0755090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
