Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257100 | XP_003608666.1 | 91.036 | 357 | 6 | 1 | 1 | 331 | 1 | 357 | 0.0 | 663 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257100 | sp|Q8L7W2|NUDT8_ARATH | 54.420 | 362 | 123 | 6 | 9 | 328 | 2 | 363 | 1.64e-130 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257100 | G7JHP2 | 91.036 | 357 | 6 | 1 | 1 | 331 | 1 | 357 | 0.0 | 663 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044180 | Msa1257100 | 0.827516 | 1.498246e-54 | -8.615850e-47 |
| Msa0064550 | Msa1257100 | 0.808833 | 2.550229e-50 | -8.615850e-47 |
| Msa0072830 | Msa1257100 | 0.810398 | 1.175540e-50 | -8.615850e-47 |
| Msa0072860 | Msa1257100 | 0.808439 | 3.095267e-50 | -8.615850e-47 |
| Msa0116470 | Msa1257100 | 0.822422 | 2.389000e-53 | -8.615850e-47 |
| Msa0116510 | Msa1257100 | 0.834626 | 2.688767e-56 | -8.615850e-47 |
| Msa0604880 | Msa1257100 | 0.839068 | 1.976824e-57 | -8.615850e-47 |
| Msa0605250 | Msa1257100 | 0.801085 | 1.063529e-48 | -8.615850e-47 |
| Msa0610780 | Msa1257100 | 0.835543 | 1.578459e-56 | -8.615850e-47 |
| Msa0610810 | Msa1257100 | 0.844359 | 7.936551e-59 | -8.615850e-47 |
| Msa0614980 | Msa1257100 | 0.810478 | 1.129712e-50 | -8.615850e-47 |
| Msa0619390 | Msa1257100 | 0.824491 | 7.844411e-54 | -8.615850e-47 |
| Msa0621780 | Msa1257100 | 0.812599 | 3.909358e-51 | -8.615850e-47 |
| Msa0622250 | Msa1257100 | 0.816771 | 4.657792e-52 | -8.615850e-47 |
| Msa0627050 | Msa1257100 | 0.852407 | 4.711241e-61 | -8.615850e-47 |
| Msa0646190 | Msa1257100 | 0.810943 | 8.965290e-51 | -8.615850e-47 |
| Msa0646340 | Msa1257100 | 0.805416 | 1.348909e-49 | -8.615850e-47 |
| Msa0650640 | Msa1257100 | 0.804007 | 2.655467e-49 | -8.615850e-47 |
| Msa0651310 | Msa1257100 | 0.851198 | 1.037676e-60 | -8.615850e-47 |
| Msa0654880 | Msa1257100 | 0.808517 | 2.979396e-50 | -8.615850e-47 |
| Msa0665150 | Msa1257100 | 0.805413 | 1.351225e-49 | -8.615850e-47 |
| Msa0675010 | Msa1257100 | 0.811452 | 6.953451e-51 | -8.615850e-47 |
| Msa0685000 | Msa1257100 | 0.815017 | 1.146845e-51 | -8.615850e-47 |
| Msa0693400 | Msa1257100 | 0.826493 | 2.631785e-54 | -8.615850e-47 |
| Msa0693500 | Msa1257100 | 0.848528 | 5.787354e-60 | -8.615850e-47 |
| Msa0698650 | Msa1257100 | 0.809873 | 1.525529e-50 | -8.615850e-47 |
| Msa0702620 | Msa1257100 | 0.800290 | 1.544692e-48 | -8.615850e-47 |
| Msa0713210 | Msa1257100 | 0.804592 | 2.006512e-49 | -8.615850e-47 |
| Msa0748330 | Msa1257100 | 0.809113 | 2.221295e-50 | -8.615850e-47 |
| Msa0749150 | Msa1257100 | 0.801972 | 6.995168e-49 | -8.615850e-47 |
| Msa0775580 | Msa1257100 | 0.807888 | 4.056394e-50 | -8.615850e-47 |
| Msa0786100 | Msa1257100 | 0.821024 | 5.029498e-53 | -8.615850e-47 |
| Msa0793100 | Msa1257100 | 0.803945 | 2.735803e-49 | -8.615850e-47 |
| Msa0795710 | Msa1257100 | 0.813780 | 2.152336e-51 | -8.615850e-47 |
| Msa0833450 | Msa1257100 | 0.819504 | 1.121563e-52 | -8.615850e-47 |
| Msa0154240 | Msa1257100 | 0.843810 | 1.114319e-58 | -8.615850e-47 |
| Msa0154270 | Msa1257100 | 0.807847 | 4.137518e-50 | -8.615850e-47 |
| Msa0173370 | Msa1257100 | 0.841256 | 5.305731e-58 | -8.615850e-47 |
| Msa0187980 | Msa1257100 | 0.806265 | 8.945700e-50 | -8.615850e-47 |
| Msa1236860 | Msa1257100 | 0.817748 | 2.807475e-52 | -8.615850e-47 |
| Msa1243730 | Msa1257100 | 0.824721 | 6.923593e-54 | -8.615850e-47 |
| Msa1257100 | Msa1266840 | 0.818219 | 2.197053e-52 | -8.615850e-47 |
| Msa1257100 | Msa1288970 | 0.810700 | 1.011736e-50 | -8.615850e-47 |
| Msa1257100 | Msa1317240 | 0.811171 | 7.999031e-51 | -8.615850e-47 |
| Msa1257100 | Msa1349810 | 0.857786 | 1.287564e-62 | -8.615850e-47 |
| Msa1257100 | Msa1358340 | 0.824679 | 7.081230e-54 | -8.615850e-47 |
| Msa1257100 | Msa1359890 | 0.808394 | 3.164820e-50 | -8.615850e-47 |
| Msa1257100 | Msa1404690 | 0.812503 | 4.103068e-51 | -8.615850e-47 |
| Msa1257100 | Msa1406990 | 0.999262 | 2.891139e-299 | -8.615850e-47 |
| Msa1257100 | Msa1443550 | 0.830047 | 3.658035e-55 | -8.615850e-47 |
| Msa0392050 | Msa1257100 | 0.826967 | 2.028373e-54 | -8.615850e-47 |
| Msa0404690 | Msa1257100 | 0.802042 | 6.768346e-49 | -8.615850e-47 |
| Msa0469950 | Msa1257100 | 0.825471 | 4.603563e-54 | -8.615850e-47 |
| Msa0471760 | Msa1257100 | 0.822765 | 1.988232e-53 | -8.615850e-47 |
| Msa0980980 | Msa1257100 | 0.801275 | 9.723062e-49 | -8.615850e-47 |
| Msa0984000 | Msa1257100 | 0.841107 | 5.806183e-58 | -8.615850e-47 |
| Msa1053690 | Msa1257100 | 0.811793 | 5.861941e-51 | -8.615850e-47 |
| Msa1076520 | Msa1257100 | 0.800361 | 1.494099e-48 | -8.615850e-47 |
| Msa0344680 | Msa1257100 | 0.827424 | 1.576389e-54 | -8.615850e-47 |
| Msa1144730 | Msa1257100 | 0.825813 | 3.820599e-54 | -8.615850e-47 |
| Msa1173380 | Msa1257100 | 0.819417 | 1.174561e-52 | -8.615850e-47 |
| Msa1182800 | Msa1257100 | 0.839652 | 1.393853e-57 | -8.615850e-47 |
| Msa1182830 | Msa1257100 | 0.808263 | 3.375684e-50 | -8.615850e-47 |
| Msa1193400 | Msa1257100 | 0.829490 | 5.000640e-55 | -8.615850e-47 |
| Msa1193430 | Msa1257100 | 0.830441 | 2.931671e-55 | -8.615850e-47 |
| Msa1206760 | Msa1257100 | 0.836529 | 8.869965e-57 | -8.615850e-47 |
| Msa1206830 | Msa1257100 | 0.939748 | 7.537041e-100 | -8.615850e-47 |
| Msa1219370 | Msa1257100 | 0.816249 | 6.096431e-52 | -8.615850e-47 |
| Msa0515460 | Msa1257100 | 0.816591 | 5.109911e-52 | -8.615850e-47 |
| Msa0530340 | Msa1257100 | 0.814594 | 1.422988e-51 | -8.615850e-47 |
| Msa0549540 | Msa1257100 | 0.815949 | 7.113436e-52 | -8.615850e-47 |
| Msa0556070 | Msa1257100 | 0.843040 | 1.788808e-58 | -8.615850e-47 |
| Msa0570680 | Msa1257100 | 0.832612 | 8.559409e-56 | -8.615850e-47 |
| Msa0577050 | Msa1257100 | 0.850476 | 1.656614e-60 | -8.615850e-47 |
| Msa0579360 | Msa1257100 | 0.800994 | 1.109851e-48 | -8.615850e-47 |
| Msa0587290 | Msa1257100 | 0.813981 | 1.943888e-51 | -8.615850e-47 |
| Msa0871470 | Msa1257100 | 0.809674 | 1.683565e-50 | -8.615850e-47 |
| Msa0879650 | Msa1257100 | 0.800155 | 1.645582e-48 | -8.615850e-47 |
| Msa0904630 | Msa1257100 | 0.835105 | 2.036166e-56 | -8.615850e-47 |
| Msa0936650 | Msa1257100 | 0.826855 | 2.157433e-54 | -8.615850e-47 |
| Msa0936690 | Msa1257100 | 0.804424 | 2.174509e-49 | -8.615850e-47 |
| Msa0950470 | Msa1257100 | 0.806896 | 6.585105e-50 | -8.615850e-47 |
| Msa0950570 | Msa1257100 | 0.803372 | 3.597259e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257100 | MtrunA17_Chr4g0055811 | 91.036 | 357 | 6 | 1 | 1 | 331 | 1 | 357 | 0.0 | 663 |
| Msa1257100 | MtrunA17_Chr2g0290501 | 43.165 | 278 | 131 | 2 | 76 | 327 | 56 | 332 | 4.70e-79 | 244 |
| Msa1257100 | MtrunA17_Chr3g0102431 | 46.124 | 258 | 112 | 2 | 91 | 322 | 25 | 281 | 9.21e-75 | 231 |
| Msa1257100 | MtrunA17_Chr4g0076351 | 43.529 | 255 | 117 | 2 | 91 | 318 | 12 | 266 | 2.19e-72 | 225 |
| Msa1257100 | MtrunA17_Chr3g0120821 | 39.796 | 294 | 127 | 5 | 37 | 302 | 45 | 316 | 1.75e-71 | 225 |
| Msa1257100 | MtrunA17_Chr8g0383231 | 44.664 | 253 | 112 | 3 | 96 | 322 | 23 | 273 | 2.51e-68 | 215 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257100 | AT5G47240.1 | 54.420 | 362 | 123 | 6 | 9 | 328 | 2 | 363 | 1.66e-131 | 379 |
| Msa1257100 | AT5G47240.2 | 50.384 | 391 | 123 | 7 | 9 | 328 | 2 | 392 | 1.57e-124 | 363 |
| Msa1257100 | AT5G47650.5 | 44.186 | 258 | 115 | 3 | 91 | 322 | 19 | 273 | 1.02e-70 | 221 |
| Msa1257100 | AT5G47650.3 | 44.186 | 258 | 115 | 3 | 91 | 322 | 19 | 273 | 1.02e-70 | 221 |
| Msa1257100 | AT5G47650.1 | 44.186 | 258 | 115 | 3 | 91 | 322 | 19 | 273 | 1.02e-70 | 221 |
| Msa1257100 | AT4G25434.1 | 43.600 | 250 | 119 | 2 | 91 | 319 | 19 | 267 | 4.83e-70 | 219 |
| Msa1257100 | AT5G47650.4 | 43.726 | 263 | 119 | 3 | 91 | 327 | 65 | 324 | 5.80e-70 | 221 |
| Msa1257100 | AT5G47650.2 | 43.726 | 263 | 119 | 3 | 91 | 327 | 66 | 325 | 6.88e-70 | 221 |
| Msa1257100 | AT4G25434.10 | 42.745 | 255 | 119 | 2 | 91 | 319 | 19 | 272 | 3.66e-69 | 218 |
| Msa1257100 | AT4G25434.2 | 39.350 | 277 | 119 | 3 | 91 | 319 | 19 | 294 | 3.26e-64 | 206 |
| Msa1257100 | AT4G25434.8 | 38.652 | 282 | 119 | 3 | 91 | 319 | 19 | 299 | 1.91e-63 | 204 |
| Msa1257100 | AT2G04430.2 | 43.750 | 240 | 105 | 4 | 91 | 300 | 10 | 249 | 2.32e-61 | 197 |
| Msa1257100 | AT2G04430.1 | 43.750 | 240 | 105 | 4 | 91 | 300 | 29 | 268 | 5.28e-61 | 197 |
| Msa1257100 | AT4G12720.2 | 41.634 | 257 | 120 | 4 | 91 | 319 | 10 | 264 | 2.17e-60 | 195 |
| Msa1257100 | AT4G12720.3 | 41.634 | 257 | 120 | 4 | 91 | 319 | 10 | 264 | 2.17e-60 | 195 |
| Msa1257100 | AT4G12720.1 | 41.634 | 257 | 120 | 4 | 91 | 319 | 10 | 264 | 2.17e-60 | 195 |
| Msa1257100 | AT4G25434.9 | 46.907 | 194 | 81 | 2 | 91 | 263 | 19 | 211 | 1.62e-57 | 185 |
| Msa1257100 | AT4G25434.7 | 45.729 | 199 | 81 | 2 | 91 | 263 | 19 | 216 | 1.05e-56 | 183 |
| Msa1257100 | AT2G04450.1 | 39.695 | 262 | 127 | 5 | 88 | 320 | 7 | 266 | 6.61e-54 | 178 |
| Msa1257100 | AT4G25434.4 | 44.271 | 192 | 86 | 1 | 149 | 319 | 31 | 222 | 1.92e-52 | 173 |
| Msa1257100 | AT4G25434.3 | 43.147 | 197 | 86 | 1 | 149 | 319 | 31 | 227 | 1.21e-51 | 171 |
| Msa1257100 | AT4G25434.5 | 43.147 | 197 | 86 | 1 | 149 | 319 | 31 | 227 | 1.21e-51 | 171 |
| Msa1257100 | AT4G25434.6 | 40.265 | 226 | 81 | 3 | 91 | 263 | 19 | 243 | 3.98e-51 | 170 |
| Msa1257100 | AT4G12720.5 | 44.776 | 201 | 82 | 3 | 91 | 263 | 10 | 209 | 1.09e-49 | 165 |
| Msa1257100 | AT4G25434.12 | 44.444 | 162 | 63 | 2 | 91 | 226 | 19 | 179 | 2.93e-42 | 146 |
| Msa1257100 | AT4G25434.11 | 38.095 | 189 | 63 | 3 | 91 | 226 | 19 | 206 | 9.67e-37 | 133 |
| Msa1257100 | AT4G25434.13 | 36.232 | 207 | 79 | 2 | 166 | 319 | 1 | 207 | 1.14e-36 | 131 |
| Msa1257100 | AT4G12720.6 | 39.560 | 182 | 81 | 3 | 166 | 319 | 1 | 181 | 1.50e-34 | 125 |
| Msa1257100 | AT4G12720.4 | 47.200 | 125 | 58 | 2 | 91 | 215 | 10 | 126 | 2.22e-29 | 115 |
| Msa1257100 | AT4G12720.4 | 41.803 | 122 | 69 | 2 | 199 | 319 | 184 | 304 | 3.03e-22 | 95.5 |
| Msa1257100 | AT2G04440.1 | 40.523 | 153 | 83 | 4 | 91 | 237 | 10 | 160 | 3.43e-29 | 112 |
Find 84 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAGTTCCCATTGTATTAA+TGG | 0.183525 | 8_2:-57485915 | Msa1257100:CDS |
| TGGTCTTGTTTGTGCCTAAT+TGG | 0.233692 | 8_2:-57486689 | None:intergenic |
| TAGTAGTATATTTGCATATC+TGG | 0.244040 | 8_2:-57486488 | Msa1257100:five_prime_UTR |
| TGCCTCAGATGACACTTATT+TGG | 0.255967 | 8_2:-57485979 | Msa1257100:CDS |
| TGCAGGGAAAGAAGGGAATT+TGG | 0.271776 | 8_2:-57485664 | Msa1257100:intron |
| GGATTGTGTGGTAACCTATT+TGG | 0.272788 | 8_2:+57485816 | None:intergenic |
| GATATGTGATGTTAACTTAC+TGG | 0.280931 | 8_2:-57485016 | Msa1257100:CDS |
| TAAATTACCTTGACAGCAAC+TGG | 0.331130 | 8_2:+57485608 | None:intergenic |
| AGAGAAGTGAAGGAAGAAAC+TGG | 0.340232 | 8_2:-57484275 | Msa1257100:CDS |
| ATGGAATCTTCTTGTATTAG+TGG | 0.340759 | 8_2:+57483811 | None:intergenic |
| TTGTTGAAGTCATAGCATTC+AGG | 0.346192 | 8_2:-57484107 | Msa1257100:intron |
| TTGAAATTGAAGGAGCAAAA+TGG | 0.347302 | 8_2:-57483861 | Msa1257100:CDS |
| TTCAAATGTGGACAAAGAAT+TGG | 0.348986 | 8_2:+57486389 | None:intergenic |
| CAAGTAGTTTCCAAGTTTGA+TGG | 0.355833 | 8_2:-57483721 | Msa1257100:CDS |
| ATTGCACTTGTTCCTCATTT+CGG | 0.363268 | 8_2:-57483479 | Msa1257100:three_prime_UTR |
| GGAAGCATGCAAGGTCCTTC+AGG | 0.363281 | 8_2:+57484990 | None:intergenic |
| GTCAAAGACGTTATAGTATA+GGG | 0.368106 | 8_2:+57483687 | None:intergenic |
| TGTCAAAGACGTTATAGTAT+AGG | 0.374450 | 8_2:+57483686 | None:intergenic |
| ACAAGATCAGATTGCTCTAT+AGG | 0.380012 | 8_2:+57485632 | None:intergenic |
| GGATTCTCATTGATCCAAAT+AGG | 0.382227 | 8_2:-57485830 | Msa1257100:CDS |
| ACTGTGTTGGAAAATAATTT+AGG | 0.384026 | 8_2:-57483651 | Msa1257100:exon |
| AGCATAGATGCAAAGGCATA+TGG | 0.400461 | 8_2:+57485795 | None:intergenic |
| AAAATCTAGATAATCCAATT+AGG | 0.407187 | 8_2:+57486675 | None:intergenic |
| ACTTGATGTGATGCATTTGC+TGG | 0.407708 | 8_2:+57484969 | None:intergenic |
| GATATCTTTATTGCTCGTCT+TGG | 0.413439 | 8_2:-57483772 | Msa1257100:CDS |
| GATGCCTTTGATGATGAGTA+TGG | 0.416511 | 8_2:-57485855 | Msa1257100:CDS |
| ATATCTTTATTGCTCGTCTT+GGG | 0.440305 | 8_2:-57483771 | Msa1257100:CDS |
| ATATAGTTCGATACATGTTA+AGG | 0.460517 | 8_2:-57486558 | Msa1257100:five_prime_UTR |
| CAATACCACCATGCAGAGCC+AGG | 0.462871 | 8_2:-57485038 | Msa1257100:CDS |
| ACTTGTTCCTCATTTCGGTT+TGG | 0.469207 | 8_2:-57483474 | Msa1257100:three_prime_UTR |
| AGTTGATCCATTAATACAAT+GGG | 0.469605 | 8_2:+57485908 | None:intergenic |
| TCTTTGTCCACATTTGAAGT+TGG | 0.473737 | 8_2:-57486384 | Msa1257100:CDS |
| TCTGGATTGTGATCTCTCAT+TGG | 0.490334 | 8_2:-57486470 | Msa1257100:five_prime_UTR |
| TAAGTTAACATCACATATCC+TGG | 0.491360 | 8_2:+57485020 | None:intergenic |
| GCATCACATCAAGTCGGAAT+CGG | 0.491928 | 8_2:-57484960 | Msa1257100:CDS |
| CAGGCAGAGGAGATTTATAC+AGG | 0.497331 | 8_2:-57484305 | Msa1257100:CDS |
| GGACATCAATAGTAGTGTAT+TGG | 0.497750 | 8_2:+57483610 | None:intergenic |
| TTTGTTTATCTCTTTCTCAC+TGG | 0.499015 | 8_2:-57485773 | Msa1257100:CDS |
| GGTAAATAGTGTCAGTGATC+AGG | 0.503010 | 8_2:-57486434 | Msa1257100:five_prime_UTR |
| GAGAATCTTCACTAAAATCA+AGG | 0.504165 | 8_2:+57486532 | None:intergenic |
| GTGGATGATCTTGAAATTGA+AGG | 0.507225 | 8_2:-57483871 | Msa1257100:CDS |
| TCTTGTTCCAGTTGCTGTCA+AGG | 0.509061 | 8_2:-57485615 | Msa1257100:intron |
| TGTGATCTCTCATTGGAGAC+TGG | 0.514900 | 8_2:-57486463 | Msa1257100:five_prime_UTR |
| GAGAAGTGAAGGAAGAAACT+GGG | 0.516226 | 8_2:-57484274 | Msa1257100:CDS |
| CTACTTTCCAAACCGAAATG+AGG | 0.516325 | 8_2:+57483467 | None:intergenic |
| AGGAGCTGTAAGAGAAGTGA+AGG | 0.519985 | 8_2:-57484285 | Msa1257100:CDS |
| ATATCAATAAAGAGTTGCTA+TGG | 0.528372 | 8_2:-57483515 | Msa1257100:three_prime_UTR |
| CTCATTGGAGACTGGAATTG+TGG | 0.534912 | 8_2:-57486455 | Msa1257100:five_prime_UTR |
| TTATATGTTACATATTCTAC+CGG | 0.542353 | 8_2:+57483589 | None:intergenic |
| AAGTTGATCCATTAATACAA+TGG | 0.544572 | 8_2:+57485907 | None:intergenic |
| TAAACAAAGCATAGATGCAA+AGG | 0.547763 | 8_2:+57485788 | None:intergenic |
| TGATTCAATAAATTACAAGA+TGG | 0.551238 | 8_2:+57483414 | None:intergenic |
| GAATATGTAACATATAATTG+AGG | 0.554318 | 8_2:-57483583 | Msa1257100:three_prime_UTR |
| ATCTACAATCTTCTTGAACA+TGG | 0.556041 | 8_2:+57483792 | None:intergenic |
| TTCAATAAATTACAAGATGG+AGG | 0.558417 | 8_2:+57483417 | None:intergenic |
| TCTTTCTCACTGGAAAAGAA+TGG | 0.560278 | 8_2:-57485763 | Msa1257100:intron |
| AAGAGTTGCTATGGAACATG+AGG | 0.567194 | 8_2:-57483506 | Msa1257100:three_prime_UTR |
| AATGATGATTCCAACTGTGT+TGG | 0.569974 | 8_2:-57483664 | Msa1257100:CDS |
| CCCTCCATACTCATCATCAA+AGG | 0.576216 | 8_2:+57485851 | None:intergenic |
| GCATTTGCTGGAAGCATGCA+AGG | 0.587186 | 8_2:+57484981 | None:intergenic |
| TCACATATCCTGGCTCTGCA+TGG | 0.590682 | 8_2:+57485030 | None:intergenic |
| AATACACTACTATTGATGTC+CGG | 0.596781 | 8_2:-57483608 | Msa1257100:three_prime_UTR |
| TTAACTTACTGGATTCCTGA+AGG | 0.599287 | 8_2:-57485005 | Msa1257100:CDS |
| ATTTGAGTAAAGAAACATCA+TGG | 0.600319 | 8_2:+57486579 | None:intergenic |
| AGAAGTGAAGGAAGAAACTG+GGG | 0.603388 | 8_2:-57484273 | Msa1257100:intron |
| AATAGTGTCAGTGATCAGGA+TGG | 0.610765 | 8_2:-57486430 | Msa1257100:exon |
| TCACATCAAGTCGGAATCGG+AGG | 0.616036 | 8_2:-57484957 | Msa1257100:CDS |
| CCTAAAACTTGTGAACAAAG+TGG | 0.620183 | 8_2:+57486350 | None:intergenic |
| CCTTTGATGATGAGTATGGA+GGG | 0.620814 | 8_2:-57485851 | Msa1257100:CDS |
| ACAGTGATCGTAGATGATAG+TGG | 0.623914 | 8_2:+57483892 | None:intergenic |
| CCTCAGTTCAAGTGCCGCAG+AGG | 0.632039 | 8_2:-57486303 | Msa1257100:intron |
| TGCTCTACAAACTCAACCAG+TGG | 0.632663 | 8_2:+57483835 | None:intergenic |
| GCAAATATACTACTATGTGA+CGG | 0.641189 | 8_2:+57486496 | None:intergenic |
| AGGAGCAAAATGGATGCCAC+TGG | 0.654186 | 8_2:-57483851 | Msa1257100:CDS |
| CATATCCTGGCTCTGCATGG+TGG | 0.655970 | 8_2:+57485033 | None:intergenic |
| TTCTAGGCATGTACACAATG+TGG | 0.663546 | 8_2:-57483956 | Msa1257100:intron |
| GCAAATGCATCACATCAAGT+CGG | 0.666360 | 8_2:-57484966 | Msa1257100:CDS |
| GCCTTTGATGATGAGTATGG+AGG | 0.668533 | 8_2:-57485852 | Msa1257100:CDS |
| AGTGTCAGTGATCAGGATGG+AGG | 0.668878 | 8_2:-57486427 | Msa1257100:exon |
| CGTCTTGGGAAACGTTACTG+TGG | 0.668940 | 8_2:-57483757 | Msa1257100:CDS |
| AGAGTTGCTATGGAACATGA+GGG | 0.669158 | 8_2:-57483505 | Msa1257100:three_prime_UTR |
| TGCCAAATAAGTGTCATCTG+AGG | 0.672505 | 8_2:+57485977 | None:intergenic |
| GCAAAGGCATATGGATTGTG+TGG | 0.674954 | 8_2:+57485804 | None:intergenic |
| ACTATCATCTACGATCACTG+TGG | 0.741537 | 8_2:-57483890 | Msa1257100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTATTTTATTCAATCTTA+TGG | - | chr8_2:57485585-57485604 | Msa1257100:intron | 15.0% |
| !!! | TTTTATTTACATCAAAACTT+AGG | + | chr8_2:57485842-57485861 | None:intergenic | 15.0% |
| !! | AAAAATTGAACTTATTCATA+AGG | - | chr8_2:57485864-57485883 | Msa1257100:CDS | 15.0% |
| !! | AAAATCTAGATAATCCAATT+AGG | + | chr8_2:57483403-57483422 | None:intergenic | 20.0% |
| !! | AGCTGATATTTGAATTTAAT+TGG | - | chr8_2:57483980-57483999 | Msa1257100:intron | 20.0% |
| !!! | AGTTTAACATCTTTAATTTC+AGG | - | chr8_2:57484052-57484071 | Msa1257100:intron | 20.0% |
| !!! | GTTTAACATCTTTAATTTCA+GGG | - | chr8_2:57484053-57484072 | Msa1257100:intron | 20.0% |
| !! | TTCTTTATTAATAGAAATGC+AGG | + | chr8_2:57484497-57484516 | None:intergenic | 20.0% |
| !!! | TAACTTGTAATTACGTTAAA+CGG | + | chr8_2:57484597-57484616 | None:intergenic | 20.0% |
| !! | TTGGTTATATTAATTGTCTT+AGG | - | chr8_2:57484635-57484654 | Msa1257100:intron | 20.0% |
| !! | AATTTATTCGTCTATTTGTT+GGG | - | chr8_2:57484737-57484756 | Msa1257100:intron | 20.0% |
| !!! | CAAATTTGATCAAATTTTCT+AGG | - | chr8_2:57484898-57484917 | Msa1257100:intron | 20.0% |
| !! | TTCTTCTAACAAATTTGTAA+AGG | - | chr8_2:57485315-57485334 | Msa1257100:intron | 20.0% |
| !! | CAATTTATGTTTAAATACCA+CGG | - | chr8_2:57485619-57485638 | Msa1257100:CDS | 20.0% |
| !! | ACATAATGACATTACATAAA+CGG | + | chr8_2:57485716-57485735 | None:intergenic | 20.0% |
| !! | TTATATGTTACATATTCTAC+CGG | + | chr8_2:57486489-57486508 | None:intergenic | 20.0% |
| !! | GAATATGTAACATATAATTG+AGG | - | chr8_2:57486492-57486511 | Msa1257100:five_prime_UTR | 20.0% |
| !! | TGATTCAATAAATTACAAGA+TGG | + | chr8_2:57486664-57486683 | None:intergenic | 20.0% |
| ! | ATTTGAGTAAAGAAACATCA+TGG | + | chr8_2:57483499-57483518 | None:intergenic | 25.0% |
| ! | ATATAGTTCGATACATGTTA+AGG | - | chr8_2:57483517-57483536 | Msa1257100:three_prime_UTR | 25.0% |
| ! | TAGTAGTATATTTGCATATC+TGG | - | chr8_2:57483587-57483606 | Msa1257100:three_prime_UTR | 25.0% |
| !! | AAATTTTCCAACTTCAAATG+TGG | + | chr8_2:57483701-57483720 | None:intergenic | 25.0% |
| ! | AGCTTATATGAGAATCTAAT+TGG | + | chr8_2:57483809-57483828 | None:intergenic | 25.0% |
| !! | TTGCATAAAATCTAAAGTCA+TGG | - | chr8_2:57483848-57483867 | Msa1257100:CDS | 25.0% |
| !! | ATCTAAAGTCATGGTTAATA+TGG | - | chr8_2:57483857-57483876 | Msa1257100:CDS | 25.0% |
| ! | CTAAAATGTTAAAGAGAATG+TGG | - | chr8_2:57484015-57484034 | Msa1257100:intron | 25.0% |
| ! | AGTTGATCCATTAATACAAT+GGG | + | chr8_2:57484170-57484189 | None:intergenic | 25.0% |
| !! | AAGTTGATCCATTAATACAA+TGG | + | chr8_2:57484171-57484190 | None:intergenic | 25.0% |
| ! | ATTGAAAACCTAACATTATG+TGG | - | chr8_2:57484385-57484404 | Msa1257100:intron | 25.0% |
| ! | AATGTATAAAGTGTATCCTA+CGG | - | chr8_2:57484661-57484680 | Msa1257100:intron | 25.0% |
| ! | CAATTTATTCGTCTATTTGT+TGG | - | chr8_2:57484736-57484755 | Msa1257100:intron | 25.0% |
| ! | ACAATGCTTGTAAAACAAAA+AGG | - | chr8_2:57484787-57484806 | Msa1257100:intron | 25.0% |
| ! | TCAATCAAAACAATGAAGTA+TGG | - | chr8_2:57485149-57485168 | Msa1257100:intron | 25.0% |
| ! | ATATCATTATCATGCTATGT+TGG | + | chr8_2:57485201-57485220 | None:intergenic | 25.0% |
| !! | ATTTGGTTTATTGAGCATTT+AGG | + | chr8_2:57485441-57485460 | None:intergenic | 25.0% |
| ! | ATCTGTTTACCATTGAATAA+GGG | + | chr8_2:57485485-57485504 | None:intergenic | 25.0% |
| ! | TATTCATAAGGTTACATGAT+AGG | - | chr8_2:57485876-57485895 | Msa1257100:CDS | 25.0% |
| ! | TGAACTTCTTGATAAATTCT+AGG | - | chr8_2:57486103-57486122 | Msa1257100:intron | 25.0% |
| !! | AAATTATTTTCCAACACAGT+TGG | + | chr8_2:57486424-57486443 | None:intergenic | 25.0% |
| ! | ACTGTGTTGGAAAATAATTT+AGG | - | chr8_2:57486424-57486443 | Msa1257100:exon | 25.0% |
| ! | ATATCAATAAAGAGTTGCTA+TGG | - | chr8_2:57486560-57486579 | Msa1257100:five_prime_UTR | 25.0% |
| ! | TTCAATAAATTACAAGATGG+AGG | + | chr8_2:57486661-57486680 | None:intergenic | 25.0% |
| GAGAATCTTCACTAAAATCA+AGG | + | chr8_2:57483546-57483565 | None:intergenic | 30.0% | |
| GCAAATATACTACTATGTGA+CGG | + | chr8_2:57483582-57483601 | None:intergenic | 30.0% | |
| TTCAAATGTGGACAAAGAAT+TGG | + | chr8_2:57483689-57483708 | None:intergenic | 30.0% | |
| !!! | ACAAGTTTTAGGCACAAATT+TGG | - | chr8_2:57483736-57483755 | Msa1257100:CDS | 30.0% |
| GACTAAACTCCTTATTATCA+GGG | + | chr8_2:57483926-57483945 | None:intergenic | 30.0% | |
| AGACTAAACTCCTTATTATC+AGG | + | chr8_2:57483927-57483946 | None:intergenic | 30.0% | |
| TTAAAGAGAATGTGGAACAT+GGG | - | chr8_2:57484023-57484042 | Msa1257100:intron | 30.0% | |
| ACAAGTTCCCATTGTATTAA+TGG | - | chr8_2:57484160-57484179 | Msa1257100:intron | 30.0% | |
| TAAACAAAGCATAGATGCAA+AGG | + | chr8_2:57484290-57484309 | None:intergenic | 30.0% | |
| TTTGTTTATCTCTTTCTCAC+TGG | - | chr8_2:57484302-57484321 | Msa1257100:CDS | 30.0% | |
| TTTCACTAGGATAATACACA+TGG | + | chr8_2:57484351-57484370 | None:intergenic | 30.0% | |
| !! | TAACATTATGTGGTTTTGCA+GGG | - | chr8_2:57484395-57484414 | Msa1257100:intron | 30.0% |
| ! | AGTTATGATTAGTTGCAAGT+TGG | - | chr8_2:57484616-57484635 | Msa1257100:intron | 30.0% |
| AGAAACATTCACAAAATGAC+TGG | - | chr8_2:57484875-57484894 | Msa1257100:intron | 30.0% | |
| TAAGTTAACATCACATATCC+TGG | + | chr8_2:57485058-57485077 | None:intergenic | 30.0% | |
| GATATGTGATGTTAACTTAC+TGG | - | chr8_2:57485059-57485078 | Msa1257100:intron | 30.0% | |
| ! | TATTTTGCAAAAGCTTTGCA+AGG | - | chr8_2:57485218-57485237 | Msa1257100:intron | 30.0% |
| TGTTCTAACAGCTTTCTATT+TGG | + | chr8_2:57485458-57485477 | None:intergenic | 30.0% | |
| CATCTGTTTACCATTGAATA+AGG | + | chr8_2:57485486-57485505 | None:intergenic | 30.0% | |
| ! | GAATTTCTTGATGACATGAT+TGG | + | chr8_2:57485999-57486018 | None:intergenic | 30.0% |
| TTGAAATTGAAGGAGCAAAA+TGG | - | chr8_2:57486214-57486233 | Msa1257100:intron | 30.0% | |
| ATGGAATCTTCTTGTATTAG+TGG | + | chr8_2:57486267-57486286 | None:intergenic | 30.0% | |
| ATCTACAATCTTCTTGAACA+TGG | + | chr8_2:57486286-57486305 | None:intergenic | 30.0% | |
| ATATCTTTATTGCTCGTCTT+GGG | - | chr8_2:57486304-57486323 | Msa1257100:CDS | 30.0% | |
| ! | AGTAATTTTGCCATCAAACT+TGG | + | chr8_2:57486367-57486386 | None:intergenic | 30.0% |
| GTCAAAGACGTTATAGTATA+GGG | + | chr8_2:57486391-57486410 | None:intergenic | 30.0% | |
| TGTCAAAGACGTTATAGTAT+AGG | + | chr8_2:57486392-57486411 | None:intergenic | 30.0% | |
| AATACACTACTATTGATGTC+CGG | - | chr8_2:57486467-57486486 | Msa1257100:five_prime_UTR | 30.0% | |
| ! | TCTTTGTCCACATTTGAAGT+TGG | - | chr8_2:57483691-57483710 | Msa1257100:CDS | 35.0% |
| CCTAAAACTTGTGAACAAAG+TGG | + | chr8_2:57483728-57483747 | None:intergenic | 35.0% | |
| ! | CCACTTTGTTCACAAGTTTT+AGG | - | chr8_2:57483725-57483744 | Msa1257100:CDS | 35.0% |
| TAATAAGGAGTTTAGTCTCG+AGG | - | chr8_2:57483929-57483948 | Msa1257100:CDS | 35.0% | |
| GTTAAAGAGAATGTGGAACA+TGG | - | chr8_2:57484022-57484041 | Msa1257100:intron | 35.0% | |
| GGATTCTCATTGATCCAAAT+AGG | - | chr8_2:57484245-57484264 | Msa1257100:intron | 35.0% | |
| TCTTTCTCACTGGAAAAGAA+TGG | - | chr8_2:57484312-57484331 | Msa1257100:intron | 35.0% | |
| CTGCAAAACCACATAATGTT+AGG | + | chr8_2:57484396-57484415 | None:intergenic | 35.0% | |
| !! | CTAACATTATGTGGTTTTGC+AGG | - | chr8_2:57484394-57484413 | Msa1257100:intron | 35.0% |
| ACAAGATCAGATTGCTCTAT+AGG | + | chr8_2:57484446-57484465 | None:intergenic | 35.0% | |
| TAAATTACCTTGACAGCAAC+TGG | + | chr8_2:57484470-57484489 | None:intergenic | 35.0% | |
| CAAACATCATTGCGTGATTT+AGG | + | chr8_2:57484555-57484574 | None:intergenic | 35.0% | |
| AAAACTTGATACATGACCGT+AGG | + | chr8_2:57484680-57484699 | None:intergenic | 35.0% | |
| !! | AAAACAAAAAGGCACCATGT+TGG | - | chr8_2:57484798-57484817 | Msa1257100:intron | 35.0% |
| !!! | ATTGAACTTTTTCGCCAACA+TGG | + | chr8_2:57484815-57484834 | None:intergenic | 35.0% |
| ! | TGAGGTAACTAGACTCATTT+TGG | - | chr8_2:57484991-57485010 | Msa1257100:CDS | 35.0% |
| TTAACTTACTGGATTCCTGA+AGG | - | chr8_2:57485070-57485089 | Msa1257100:intron | 35.0% | |
| !! | CAAATTTGTAAAGGTGCTTG+TGG | - | chr8_2:57485324-57485343 | Msa1257100:intron | 35.0% |
| !! | ATCCAGTTGGTATTTTCCAA+AGG | + | chr8_2:57485384-57485403 | None:intergenic | 35.0% |
| GAACAGAAACCCTTATTCAA+TGG | - | chr8_2:57485473-57485492 | Msa1257100:intron | 35.0% | |
| TTAGGGGAAATCATGTAAAC+TGG | + | chr8_2:57485646-57485665 | None:intergenic | 35.0% | |
| TTATGTTGCGTACAGTTTAG+GGG | + | chr8_2:57485662-57485681 | None:intergenic | 35.0% | |
| CTTATGTTGCGTACAGTTTA+GGG | + | chr8_2:57485663-57485682 | None:intergenic | 35.0% | |
| TCTTATGTTGCGTACAGTTT+AGG | + | chr8_2:57485664-57485683 | None:intergenic | 35.0% | |
| TCACTTGTGTGAATTATCTC+AGG | - | chr8_2:57485751-57485770 | Msa1257100:intron | 35.0% | |
| TTGTTGAAGTCATAGCATTC+AGG | - | chr8_2:57485968-57485987 | Msa1257100:CDS | 35.0% | |
| GTGGATGATCTTGAAATTGA+AGG | - | chr8_2:57486204-57486223 | Msa1257100:intron | 35.0% | |
| GATATCTTTATTGCTCGTCT+TGG | - | chr8_2:57486303-57486322 | Msa1257100:intron | 35.0% | |
| CAAGTAGTTTCCAAGTTTGA+TGG | - | chr8_2:57486354-57486373 | Msa1257100:CDS | 35.0% | |
| AATGATGATTCCAACTGTGT+TGG | - | chr8_2:57486411-57486430 | Msa1257100:CDS | 35.0% | |
| GGACATCAATAGTAGTGTAT+TGG | + | chr8_2:57486468-57486487 | None:intergenic | 35.0% | |
| ATTGCACTTGTTCCTCATTT+CGG | - | chr8_2:57486596-57486615 | Msa1257100:five_prime_UTR | 35.0% | |
| TCTGGATTGTGATCTCTCAT+TGG | - | chr8_2:57483605-57483624 | Msa1257100:three_prime_UTR | 40.0% | |
| GGTAAATAGTGTCAGTGATC+AGG | - | chr8_2:57483641-57483660 | Msa1257100:exon | 40.0% | |
| AATAGTGTCAGTGATCAGGA+TGG | - | chr8_2:57483645-57483664 | Msa1257100:exon | 40.0% | |
| !!! | TGGCTTTTTAGTTACCTCTG+CGG | + | chr8_2:57483789-57483808 | None:intergenic | 40.0% |
| TCATTAACTCTCCGATTCTC+AGG | - | chr8_2:57483893-57483912 | Msa1257100:CDS | 40.0% | |
| CATTAACTCTCCGATTCTCA+GGG | - | chr8_2:57483894-57483913 | Msa1257100:CDS | 40.0% | |
| GGGAAATGACCCTGATAATA+AGG | - | chr8_2:57483914-57483933 | Msa1257100:CDS | 40.0% | |
| TGCCTCAGATGACACTTATT+TGG | - | chr8_2:57484096-57484115 | Msa1257100:intron | 40.0% | |
| TGCCAAATAAGTGTCATCTG+AGG | + | chr8_2:57484101-57484120 | None:intergenic | 40.0% | |
| !! | GATGCCTTTGATGATGAGTA+TGG | - | chr8_2:57484220-57484239 | Msa1257100:intron | 40.0% |
| !! | CCTTTGATGATGAGTATGGA+GGG | - | chr8_2:57484224-57484243 | Msa1257100:intron | 40.0% |
| GGATTGTGTGGTAACCTATT+TGG | + | chr8_2:57484262-57484281 | None:intergenic | 40.0% | |
| ! | AGCATAGATGCAAAGGCATA+TGG | + | chr8_2:57484283-57484302 | None:intergenic | 40.0% |
| TGCTAGATGATGCTTTCACT+AGG | + | chr8_2:57484364-57484383 | None:intergenic | 40.0% | |
| !! | GAAGTGTTGCTGAATCTATG+AGG | - | chr8_2:57484973-57484992 | Msa1257100:CDS | 40.0% |
| ACTTGATGTGATGCATTTGC+TGG | + | chr8_2:57485109-57485128 | None:intergenic | 40.0% | |
| GCAAATGCATCACATCAAGT+CGG | - | chr8_2:57485109-57485128 | Msa1257100:intron | 40.0% | |
| ACCAACTGGATTCATTCATG+AGG | - | chr8_2:57485393-57485412 | Msa1257100:intron | 40.0% | |
| ACCTCATGAATGAATCCAGT+TGG | + | chr8_2:57485397-57485416 | None:intergenic | 40.0% | |
| AAATCATGTAAACTGGACCG+TGG | + | chr8_2:57485639-57485658 | None:intergenic | 40.0% | |
| AGAGAAGTGAAGGAAGAAAC+TGG | - | chr8_2:57485800-57485819 | Msa1257100:CDS | 40.0% | |
| GAGAAGTGAAGGAAGAAACT+GGG | - | chr8_2:57485801-57485820 | Msa1257100:CDS | 40.0% | |
| AGAAGTGAAGGAAGAAACTG+GGG | - | chr8_2:57485802-57485821 | Msa1257100:CDS | 40.0% | |
| TTCTAGGCATGTACACAATG+TGG | - | chr8_2:57486119-57486138 | Msa1257100:intron | 40.0% | |
| ACAGTGATCGTAGATGATAG+TGG | + | chr8_2:57486186-57486205 | None:intergenic | 40.0% | |
| ACTATCATCTACGATCACTG+TGG | - | chr8_2:57486185-57486204 | Msa1257100:intron | 40.0% | |
| AAGAGTTGCTATGGAACATG+AGG | - | chr8_2:57486569-57486588 | Msa1257100:five_prime_UTR | 40.0% | |
| AGAGTTGCTATGGAACATGA+GGG | - | chr8_2:57486570-57486589 | Msa1257100:five_prime_UTR | 40.0% | |
| ACTTGTTCCTCATTTCGGTT+TGG | - | chr8_2:57486601-57486620 | Msa1257100:five_prime_UTR | 40.0% | |
| CTACTTTCCAAACCGAAATG+AGG | + | chr8_2:57486611-57486630 | None:intergenic | 40.0% | |
| TGTGATCTCTCATTGGAGAC+TGG | - | chr8_2:57483612-57483631 | Msa1257100:three_prime_UTR | 45.0% | |
| CTCATTGGAGACTGGAATTG+TGG | - | chr8_2:57483620-57483639 | Msa1257100:three_prime_UTR | 45.0% | |
| AGGGTCATTTCCCTGAGAAT+CGG | + | chr8_2:57483907-57483926 | None:intergenic | 45.0% | |
| !! | GCCTTTGATGATGAGTATGG+AGG | - | chr8_2:57484223-57484242 | Msa1257100:intron | 45.0% |
| CCCTCCATACTCATCATCAA+AGG | + | chr8_2:57484227-57484246 | None:intergenic | 45.0% | |
| ! | GCAAAGGCATATGGATTGTG+TGG | + | chr8_2:57484274-57484293 | None:intergenic | 45.0% |
| !! | TGTGGTTTTGCAGGGAAAGA+AGG | - | chr8_2:57484403-57484422 | Msa1257100:intron | 45.0% |
| !! | GTGGTTTTGCAGGGAAAGAA+GGG | - | chr8_2:57484404-57484423 | Msa1257100:intron | 45.0% |
| TGCAGGGAAAGAAGGGAATT+TGG | - | chr8_2:57484411-57484430 | Msa1257100:intron | 45.0% | |
| TCTTGTTCCAGTTGCTGTCA+AGG | - | chr8_2:57484460-57484479 | Msa1257100:intron | 45.0% | |
| ! | CGTCTATTTGTTGGGCTCTA+CGG | - | chr8_2:57484745-57484764 | Msa1257100:intron | 45.0% |
| !! | CATTTTGGTCTCACTGTCTC+AGG | - | chr8_2:57485006-57485025 | Msa1257100:CDS | 45.0% |
| GCATCACATCAAGTCGGAAT+CGG | - | chr8_2:57485115-57485134 | Msa1257100:intron | 45.0% | |
| ! | GGCCTTTGGAAAATACCAAC+TGG | - | chr8_2:57485379-57485398 | Msa1257100:intron | 45.0% |
| GTGTGAATTATCTCAGGCAG+AGG | - | chr8_2:57485757-57485776 | Msa1257100:intron | 45.0% | |
| CAGGCAGAGGAGATTTATAC+AGG | - | chr8_2:57485770-57485789 | Msa1257100:CDS | 45.0% | |
| AGGAGCTGTAAGAGAAGTGA+AGG | - | chr8_2:57485790-57485809 | Msa1257100:CDS | 45.0% | |
| TGCTCTACAAACTCAACCAG+TGG | + | chr8_2:57486243-57486262 | None:intergenic | 45.0% | |
| AGTGTCAGTGATCAGGATGG+AGG | - | chr8_2:57483648-57483667 | Msa1257100:exon | 50.0% | |
| TTGGTCTCACTGTCTCAGGA+AGG | - | chr8_2:57485010-57485029 | Msa1257100:CDS | 50.0% | |
| !! | TCACATATCCTGGCTCTGCA+TGG | + | chr8_2:57485048-57485067 | None:intergenic | 50.0% |
| ! | GCATTTGCTGGAAGCATGCA+AGG | + | chr8_2:57485097-57485116 | None:intergenic | 50.0% |
| TCACATCAAGTCGGAATCGG+AGG | - | chr8_2:57485118-57485137 | Msa1257100:intron | 50.0% | |
| CACTGTTCTCCTGCAACTCT+TGG | - | chr8_2:57485358-57485377 | Msa1257100:intron | 50.0% | |
| TTCCAAAGGCCAAGAGTTGC+AGG | + | chr8_2:57485370-57485389 | None:intergenic | 50.0% | |
| AGGAGCAAAATGGATGCCAC+TGG | - | chr8_2:57486224-57486243 | Msa1257100:intron | 50.0% | |
| CGTCTTGGGAAACGTTACTG+TGG | - | chr8_2:57486318-57486337 | Msa1257100:CDS | 50.0% | |
| CAATACCACCATGCAGAGCC+AGG | - | chr8_2:57485037-57485056 | Msa1257100:CDS | 55.0% | |
| !! | CATATCCTGGCTCTGCATGG+TGG | + | chr8_2:57485045-57485064 | None:intergenic | 55.0% |
| ! | GGAAGCATGCAAGGTCCTTC+AGG | + | chr8_2:57485088-57485107 | None:intergenic | 55.0% |
| ! | CTCCTGCAACTCTTGGCCTT+TGG | - | chr8_2:57485365-57485384 | Msa1257100:intron | 55.0% |
| CCTCTGCGGCACTTGAACTG+AGG | + | chr8_2:57483775-57483794 | None:intergenic | 60.0% | |
| ! | CCTCAGTTCAAGTGCCGCAG+AGG | - | chr8_2:57483772-57483791 | Msa1257100:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 57483399 | 57486698 | 57483399 | ID=Msa1257100;Name=Msa1257100 |
| chr8_2 | mRNA | 57483399 | 57486698 | 57483399 | ID=Msa1257100-mRNA-1;Parent=Msa1257100;Name=Msa1257100-mRNA-1;_AED=0.18;_eAED=0.18;_QI=265|0.83|1|1|1|1|7|258|331 |
| chr8_2 | exon | 57483399 | 57483972 | 57483399 | ID=Msa1257100-mRNA-1:exon:17751;Parent=Msa1257100-mRNA-1 |
| chr8_2 | exon | 57484108 | 57484142 | 57484108 | ID=Msa1257100-mRNA-1:exon:17750;Parent=Msa1257100-mRNA-1 |
| chr8_2 | exon | 57484274 | 57484324 | 57484274 | ID=Msa1257100-mRNA-1:exon:17749;Parent=Msa1257100-mRNA-1 |
| chr8_2 | exon | 57484932 | 57485069 | 57484932 | ID=Msa1257100-mRNA-1:exon:17748;Parent=Msa1257100-mRNA-1 |
| chr8_2 | exon | 57485616 | 57485681 | 57485616 | ID=Msa1257100-mRNA-1:exon:17747;Parent=Msa1257100-mRNA-1 |
| chr8_2 | exon | 57485764 | 57486023 | 57485764 | ID=Msa1257100-mRNA-1:exon:17746;Parent=Msa1257100-mRNA-1 |
| chr8_2 | exon | 57486304 | 57486698 | 57486304 | ID=Msa1257100-mRNA-1:exon:17745;Parent=Msa1257100-mRNA-1 |
| chr8_2 | five_prime_UTR | 57486434 | 57486698 | 57486434 | ID=Msa1257100-mRNA-1:five_prime_utr;Parent=Msa1257100-mRNA-1 |
| chr8_2 | CDS | 57486304 | 57486433 | 57486304 | ID=Msa1257100-mRNA-1:cds;Parent=Msa1257100-mRNA-1 |
| chr8_2 | CDS | 57485764 | 57486023 | 57485764 | ID=Msa1257100-mRNA-1:cds;Parent=Msa1257100-mRNA-1 |
| chr8_2 | CDS | 57485616 | 57485681 | 57485616 | ID=Msa1257100-mRNA-1:cds;Parent=Msa1257100-mRNA-1 |
| chr8_2 | CDS | 57484932 | 57485069 | 57484932 | ID=Msa1257100-mRNA-1:cds;Parent=Msa1257100-mRNA-1 |
| chr8_2 | CDS | 57484274 | 57484324 | 57484274 | ID=Msa1257100-mRNA-1:cds;Parent=Msa1257100-mRNA-1 |
| chr8_2 | CDS | 57484108 | 57484142 | 57484108 | ID=Msa1257100-mRNA-1:cds;Parent=Msa1257100-mRNA-1 |
| chr8_2 | CDS | 57483657 | 57483972 | 57483657 | ID=Msa1257100-mRNA-1:cds;Parent=Msa1257100-mRNA-1 |
| chr8_2 | three_prime_UTR | 57483399 | 57483656 | 57483399 | ID=Msa1257100-mRNA-1:three_prime_utr;Parent=Msa1257100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
