Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833450 | XP_003611237.2 | 97.194 | 499 | 14 | 0 | 1 | 499 | 1 | 499 | 0.0 | 1019 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833450 | sp|Q9SB00|PHR_ARATH | 73.805 | 481 | 118 | 4 | 13 | 486 | 6 | 485 | 0.0 | 760 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833450 | G7KG67 | 97.194 | 499 | 14 | 0 | 1 | 499 | 1 | 499 | 0.0 | 1019 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020320 | Msa0833450 | 0.811212 | 7.836575e-51 | -8.615850e-47 |
| Msa0032450 | Msa0833450 | 0.822719 | 2.037398e-53 | -8.615850e-47 |
| Msa0039920 | Msa0833450 | 0.840931 | 6.458536e-58 | -8.615850e-47 |
| Msa0040090 | Msa0833450 | 0.846793 | 1.737728e-59 | -8.615850e-47 |
| Msa0057740 | Msa0833450 | 0.805660 | 1.198953e-49 | -8.615850e-47 |
| Msa0072830 | Msa0833450 | 0.802378 | 5.773234e-49 | -8.615850e-47 |
| Msa0072860 | Msa0833450 | 0.802420 | 5.659137e-49 | -8.615850e-47 |
| Msa0087580 | Msa0833450 | 0.845411 | 4.130110e-59 | -8.615850e-47 |
| Msa0087780 | Msa0833450 | 0.853709 | 1.997492e-61 | -8.615850e-47 |
| Msa0087790 | Msa0833450 | 0.827388 | 1.607820e-54 | -8.615850e-47 |
| Msa0096020 | Msa0833450 | 0.923234 | 3.473933e-89 | -8.615850e-47 |
| Msa0103060 | Msa0833450 | 0.802291 | 6.015310e-49 | -8.615850e-47 |
| Msa0117300 | Msa0833450 | 0.819984 | 8.715875e-53 | -8.615850e-47 |
| Msa0604640 | Msa0833450 | 0.822872 | 1.877499e-53 | -8.615850e-47 |
| Msa0610360 | Msa0833450 | 0.851550 | 8.249746e-61 | -8.615850e-47 |
| Msa0614980 | Msa0833450 | 0.843934 | 1.032425e-58 | -8.615850e-47 |
| Msa0615850 | Msa0833450 | 0.804671 | 1.931196e-49 | -8.615850e-47 |
| Msa0621780 | Msa0833450 | 0.985476 | 1.102188e-163 | -8.615850e-47 |
| Msa0630850 | Msa0833450 | 0.807123 | 5.894201e-50 | -8.615850e-47 |
| Msa0639030 | Msa0833450 | 0.803827 | 2.894557e-49 | -8.615850e-47 |
| Msa0643020 | Msa0833450 | -0.837179 | 6.053455e-57 | -8.615850e-47 |
| Msa0648200 | Msa0833450 | 0.810721 | 1.001296e-50 | -8.615850e-47 |
| Msa0650640 | Msa0833450 | 0.810427 | 1.159228e-50 | -8.615850e-47 |
| Msa0650650 | Msa0833450 | 0.801033 | 1.089944e-48 | -8.615850e-47 |
| Msa0650890 | Msa0833450 | 0.851741 | 7.285108e-61 | -8.615850e-47 |
| Msa0651310 | Msa0833450 | 0.813818 | 2.111618e-51 | -8.615850e-47 |
| Msa0665150 | Msa0833450 | 0.810780 | 9.722729e-51 | -8.615850e-47 |
| Msa0682730 | Msa0833450 | -0.822622 | 2.146083e-53 | -8.615850e-47 |
| Msa0693400 | Msa0833450 | 0.814176 | 1.760184e-51 | -8.615850e-47 |
| Msa0697600 | Msa0833450 | 0.823629 | 1.249538e-53 | -8.615850e-47 |
| Msa0698900 | Msa0833450 | 0.815670 | 8.206662e-52 | -8.615850e-47 |
| Msa0704780 | Msa0833450 | 0.840663 | 7.592077e-58 | -8.615850e-47 |
| Msa0705050 | Msa0833450 | 0.825801 | 3.844488e-54 | -8.615850e-47 |
| Msa0713210 | Msa0833450 | 0.842266 | 2.871142e-58 | -8.615850e-47 |
| Msa0713220 | Msa0833450 | 0.821921 | 3.121301e-53 | -8.615850e-47 |
| Msa0713230 | Msa0833450 | 0.805187 | 1.506627e-49 | -8.615850e-47 |
| Msa0715510 | Msa0833450 | -0.833556 | 4.983501e-56 | -8.615850e-47 |
| Msa0718920 | Msa0833450 | 0.802883 | 4.541571e-49 | -8.615850e-47 |
| Msa0734760 | Msa0833450 | 0.807021 | 6.193651e-50 | -8.615850e-47 |
| Msa0748980 | Msa0833450 | 0.804505 | 2.091808e-49 | -8.615850e-47 |
| Msa0752830 | Msa0833450 | 0.804511 | 2.085539e-49 | -8.615850e-47 |
| Msa0754350 | Msa0833450 | 0.935577 | 6.817143e-97 | -8.615850e-47 |
| Msa0755090 | Msa0833450 | 0.838064 | 3.590761e-57 | -8.615850e-47 |
| Msa0756440 | Msa0833450 | 0.804375 | 2.226237e-49 | -8.615850e-47 |
| Msa0775420 | Msa0833450 | 0.802162 | 6.395569e-49 | -8.615850e-47 |
| Msa0776590 | Msa0833450 | 0.805576 | 1.248873e-49 | -8.615850e-47 |
| Msa0782030 | Msa0833450 | 0.822303 | 2.545867e-53 | -8.615850e-47 |
| Msa0786100 | Msa0833450 | 0.810503 | 1.115832e-50 | -8.615850e-47 |
| Msa0793060 | Msa0833450 | 0.807056 | 6.089507e-50 | -8.615850e-47 |
| Msa0793100 | Msa0833450 | 0.806477 | 8.073135e-50 | -8.615850e-47 |
| Msa0795710 | Msa0833450 | 0.985879 | 5.853275e-165 | -8.615850e-47 |
| Msa0797000 | Msa0833450 | 0.804959 | 1.681569e-49 | -8.615850e-47 |
| Msa0813630 | Msa0833450 | 0.824685 | 7.059521e-54 | -8.615850e-47 |
| Msa0815950 | Msa0833450 | 0.810567 | 1.080990e-50 | -8.615850e-47 |
| Msa0822370 | Msa0833450 | 0.848743 | 5.043971e-60 | -8.615850e-47 |
| Msa0833450 | Msa0834460 | 0.810571 | 1.078842e-50 | -8.615850e-47 |
| Msa0833450 | Msa0835550 | 0.814727 | 1.329882e-51 | -8.615850e-47 |
| Msa0833450 | Msa0861480 | 0.818548 | 1.850832e-52 | -8.615850e-47 |
| Msa0833450 | Msa0861560 | 0.838511 | 2.753324e-57 | -8.615850e-47 |
| Msa0833450 | Msa0861800 | 0.833092 | 6.505042e-56 | -8.615850e-47 |
| Msa0833450 | Msa0868040 | 0.812321 | 4.495416e-51 | -8.615850e-47 |
| Msa0833450 | Msa0884840 | 0.816346 | 5.799462e-52 | -8.615850e-47 |
| Msa0833450 | Msa0887070 | 0.819505 | 1.121419e-52 | -8.615850e-47 |
| Msa0833450 | Msa0899730 | 0.810445 | 1.148388e-50 | -8.615850e-47 |
| Msa0833450 | Msa0912110 | 0.827311 | 1.678263e-54 | -8.615850e-47 |
| Msa0833450 | Msa0913120 | 0.863101 | 3.165536e-64 | -8.615850e-47 |
| Msa0833450 | Msa0930950 | 0.831135 | 1.981325e-55 | -8.615850e-47 |
| Msa0833450 | Msa0950410 | 0.850578 | 1.551436e-60 | -8.615850e-47 |
| Msa0833450 | Msa0964650 | 0.816667 | 4.913948e-52 | -8.615850e-47 |
| Msa0833450 | Msa0964680 | 0.803933 | 2.751499e-49 | -8.615850e-47 |
| Msa0833450 | Msa0982590 | 0.821281 | 4.389552e-53 | -8.615850e-47 |
| Msa0833450 | Msa0986620 | 0.837418 | 5.258536e-57 | -8.615850e-47 |
| Msa0833450 | Msa0999480 | 0.820048 | 8.425056e-53 | -8.615850e-47 |
| Msa0833450 | Msa0999590 | 0.816785 | 4.622713e-52 | -8.615850e-47 |
| Msa0833450 | Msa1010470 | 0.812126 | 4.959929e-51 | -8.615850e-47 |
| Msa0833450 | Msa1036020 | -0.824583 | 7.461927e-54 | -8.615850e-47 |
| Msa0833450 | Msa1040730 | -0.827210 | 1.774376e-54 | -8.615850e-47 |
| Msa0833450 | Msa1043020 | 0.801290 | 9.654768e-49 | -8.615850e-47 |
| Msa0833450 | Msa1044330 | 0.810240 | 1.271933e-50 | -8.615850e-47 |
| Msa0833450 | Msa1052030 | 0.812819 | 3.498970e-51 | -8.615850e-47 |
| Msa0833450 | Msa1053690 | 0.806739 | 7.107097e-50 | -8.615850e-47 |
| Msa0833450 | Msa1061760 | -0.800296 | 1.540699e-48 | -8.615850e-47 |
| Msa0833450 | Msa1067910 | 0.832128 | 1.127649e-55 | -8.615850e-47 |
| Msa0833450 | Msa1071310 | 0.815116 | 1.090106e-51 | -8.615850e-47 |
| Msa0833450 | Msa1076280 | -0.811343 | 7.342311e-51 | -8.615850e-47 |
| Msa0833450 | Msa1076520 | 0.805887 | 1.074602e-49 | -8.615850e-47 |
| Msa0833450 | Msa1096570 | 0.811756 | 5.971826e-51 | -8.615850e-47 |
| Msa0833450 | Msa1101300 | 0.820793 | 5.686120e-53 | -8.615850e-47 |
| Msa0833450 | Msa1102200 | 0.817730 | 2.833462e-52 | -8.615850e-47 |
| Msa0833450 | Msa1133440 | 0.803099 | 4.097570e-49 | -8.615850e-47 |
| Msa0833450 | Msa1134770 | -0.812018 | 5.236697e-51 | -8.615850e-47 |
| Msa0833450 | Msa1138600 | 0.807098 | 5.966342e-50 | -8.615850e-47 |
| Msa0833450 | Msa1150860 | -0.808270 | 3.363650e-50 | -8.615850e-47 |
| Msa0833450 | Msa1177620 | 0.821574 | 3.755888e-53 | -8.615850e-47 |
| Msa0833450 | Msa1188820 | 0.808660 | 2.776563e-50 | -8.615850e-47 |
| Msa0833450 | Msa1193400 | 0.811114 | 8.232219e-51 | -8.615850e-47 |
| Msa0833450 | Msa1193430 | 0.809995 | 1.435954e-50 | -8.615850e-47 |
| Msa0833450 | Msa1203860 | 0.802873 | 4.561866e-49 | -8.615850e-47 |
| Msa0833450 | Msa1209790 | 0.856920 | 2.320718e-62 | -8.615850e-47 |
| Msa0833450 | Msa1209800 | 0.853474 | 2.333650e-61 | -8.615850e-47 |
| Msa0833450 | Msa1211260 | 0.835933 | 1.257550e-56 | -8.615850e-47 |
| Msa0833450 | Msa1211300 | 0.832291 | 1.028118e-55 | -8.615850e-47 |
| Msa0833450 | Msa1211390 | 0.846889 | 1.635823e-59 | -8.615850e-47 |
| Msa0833450 | Msa1219780 | -0.830612 | 2.663149e-55 | -8.615850e-47 |
| Msa0833450 | Msa1228280 | 0.806292 | 8.827808e-50 | -8.615850e-47 |
| Msa0833450 | Msa1228330 | 0.809158 | 2.172602e-50 | -8.615850e-47 |
| Msa0833450 | Msa1237260 | 0.817105 | 3.918826e-52 | -8.615850e-47 |
| Msa0833450 | Msa1242010 | 0.823163 | 1.605815e-53 | -8.615850e-47 |
| Msa0833450 | Msa1242990 | 0.843714 | 1.181982e-58 | -8.615850e-47 |
| Msa0833450 | Msa1243630 | 0.834808 | 2.418919e-56 | -8.615850e-47 |
| Msa0833450 | Msa1243730 | 0.805609 | 1.228797e-49 | -8.615850e-47 |
| Msa0833450 | Msa1244220 | 0.833831 | 4.255127e-56 | -8.615850e-47 |
| Msa0833450 | Msa1249410 | 0.806757 | 7.044214e-50 | -8.615850e-47 |
| Msa0833450 | Msa1257100 | 0.819504 | 1.121563e-52 | -8.615850e-47 |
| Msa0833450 | Msa1266710 | -0.828613 | 8.154814e-55 | -8.615850e-47 |
| Msa0833450 | Msa1278420 | 0.812764 | 3.597307e-51 | -8.615850e-47 |
| Msa0833450 | Msa1282210 | 0.842539 | 2.431811e-58 | -8.615850e-47 |
| Msa0833450 | Msa1283120 | 0.801869 | 7.346769e-49 | -8.615850e-47 |
| Msa0833450 | Msa1284390 | 0.819459 | 1.148712e-52 | -8.615850e-47 |
| Msa0833450 | Msa1288970 | 0.830859 | 2.316816e-55 | -8.615850e-47 |
| Msa0833450 | Msa1299370 | 0.808600 | 2.859353e-50 | -8.615850e-47 |
| Msa0833450 | Msa1306700 | 0.852708 | 3.866644e-61 | -8.615850e-47 |
| Msa0833450 | Msa1317240 | 0.804134 | 2.499678e-49 | -8.615850e-47 |
| Msa0833450 | Msa1317710 | 0.811422 | 7.057988e-51 | -8.615850e-47 |
| Msa0833450 | Msa1323920 | 0.807098 | 5.965966e-50 | -8.615850e-47 |
| Msa0833450 | Msa1342400 | 0.847614 | 1.034799e-59 | -8.615850e-47 |
| Msa0833450 | Msa1348330 | -0.852765 | 3.725160e-61 | -8.615850e-47 |
| Msa0833450 | Msa1349640 | 0.819588 | 1.073300e-52 | -8.615850e-47 |
| Msa0833450 | Msa1349810 | 0.828141 | 1.059898e-54 | -8.615850e-47 |
| Msa0833450 | Msa1349850 | 0.832941 | 7.089658e-56 | -8.615850e-47 |
| Msa0833450 | Msa1356730 | 0.811781 | 5.896379e-51 | -8.615850e-47 |
| Msa0833450 | Msa1363690 | -0.804891 | 1.737964e-49 | -8.615850e-47 |
| Msa0833450 | Msa1368660 | 0.837062 | 6.485734e-57 | -8.615850e-47 |
| Msa0833450 | Msa1370930 | -0.841471 | 4.658387e-58 | -8.615850e-47 |
| Msa0833450 | Msa1384980 | 0.813125 | 2.998061e-51 | -8.615850e-47 |
| Msa0833450 | Msa1388520 | 0.804092 | 2.550241e-49 | -8.615850e-47 |
| Msa0833450 | Msa1395580 | 0.831696 | 1.441711e-55 | -8.615850e-47 |
| Msa0833450 | Msa1396550 | -0.812037 | 5.186647e-51 | -8.615850e-47 |
| Msa0833450 | Msa1403950 | 0.942337 | 8.586798e-102 | -8.615850e-47 |
| Msa0833450 | Msa1406990 | 0.820055 | 8.397132e-53 | -8.615850e-47 |
| Msa0833450 | Msa1407210 | -0.827980 | 1.159424e-54 | -8.615850e-47 |
| Msa0833450 | Msa1409060 | -0.825300 | 5.054172e-54 | -8.615850e-47 |
| Msa0833450 | Msa1413900 | 0.839414 | 1.607335e-57 | -8.615850e-47 |
| Msa0833450 | Msa1427600 | 0.803477 | 3.421866e-49 | -8.615850e-47 |
| Msa0833450 | Msa1443550 | 0.828420 | 9.078119e-55 | -8.615850e-47 |
| Msa0833450 | Msa1445780 | -0.801122 | 1.044936e-48 | -8.615850e-47 |
| Msa0833450 | Msa1446220 | 0.808370 | 3.201656e-50 | -8.615850e-47 |
| Msa0833450 | Msa1451690 | 0.837857 | 4.057350e-57 | -8.615850e-47 |
| Msa0833450 | Msa1452200 | 0.840525 | 8.253607e-58 | -8.615850e-47 |
| Msa0833450 | Msa1459630 | 0.807479 | 4.953656e-50 | -8.615850e-47 |
| Msa0134300 | Msa0833450 | 0.845500 | 3.907974e-59 | -8.615850e-47 |
| Msa0134380 | Msa0833450 | 0.853622 | 2.115763e-61 | -8.615850e-47 |
| Msa0134390 | Msa0833450 | 0.847884 | 8.718587e-60 | -8.615850e-47 |
| Msa0134400 | Msa0833450 | 0.833209 | 6.080445e-56 | -8.615850e-47 |
| Msa0134410 | Msa0833450 | 0.816994 | 4.149252e-52 | -8.615850e-47 |
| Msa0134420 | Msa0833450 | 0.826178 | 3.129011e-54 | -8.615850e-47 |
| Msa0148430 | Msa0833450 | 0.800142 | 1.655549e-48 | -8.615850e-47 |
| Msa0154240 | Msa0833450 | 0.804281 | 2.329321e-49 | -8.615850e-47 |
| Msa0160650 | Msa0833450 | 0.810544 | 1.093272e-50 | -8.615850e-47 |
| Msa0173370 | Msa0833450 | 0.809287 | 2.038801e-50 | -8.615850e-47 |
| Msa0175720 | Msa0833450 | 0.838145 | 3.422164e-57 | -8.615850e-47 |
| Msa0180590 | Msa0833450 | 0.818202 | 2.216549e-52 | -8.615850e-47 |
| Msa0180600 | Msa0833450 | 0.851815 | 6.941350e-61 | -8.615850e-47 |
| Msa0180780 | Msa0833450 | 0.860695 | 1.726563e-63 | -8.615850e-47 |
| Msa0186510 | Msa0833450 | 0.812233 | 4.699168e-51 | -8.615850e-47 |
| Msa0187980 | Msa0833450 | 0.800168 | 1.635887e-48 | -8.615850e-47 |
| Msa0188500 | Msa0833450 | 0.846148 | 2.606198e-59 | -8.615850e-47 |
| Msa0197730 | Msa0833450 | 0.846681 | 1.864613e-59 | -8.615850e-47 |
| Msa0200840 | Msa0833450 | 0.825268 | 5.141516e-54 | -8.615850e-47 |
| Msa0200870 | Msa0833450 | 0.806894 | 6.591088e-50 | -8.615850e-47 |
| Msa0210880 | Msa0833450 | 0.810868 | 9.305550e-51 | -8.615850e-47 |
| Msa0225880 | Msa0833450 | 0.812601 | 3.905254e-51 | -8.615850e-47 |
| Msa0230980 | Msa0833450 | 0.860497 | 1.982812e-63 | -8.615850e-47 |
| Msa0231590 | Msa0833450 | 0.808975 | 2.378021e-50 | -8.615850e-47 |
| Msa0372990 | Msa0833450 | 0.822936 | 1.813796e-53 | -8.615850e-47 |
| Msa0378670 | Msa0833450 | 0.847009 | 1.516034e-59 | -8.615850e-47 |
| Msa0378700 | Msa0833450 | 0.847196 | 1.347737e-59 | -8.615850e-47 |
| Msa0379540 | Msa0833450 | 0.827631 | 1.406493e-54 | -8.615850e-47 |
| Msa0385770 | Msa0833450 | 0.801629 | 8.229250e-49 | -8.615850e-47 |
| Msa0403720 | Msa0833450 | 0.806040 | 9.976061e-50 | -8.615850e-47 |
| Msa0404220 | Msa0833450 | 0.815871 | 7.404697e-52 | -8.615850e-47 |
| Msa0404690 | Msa0833450 | 0.801436 | 9.013111e-49 | -8.615850e-47 |
| Msa0408160 | Msa0833450 | 0.803875 | 2.829579e-49 | -8.615850e-47 |
| Msa0419040 | Msa0833450 | 0.809775 | 1.601585e-50 | -8.615850e-47 |
| Msa0421390 | Msa0833450 | 0.819839 | 9.408513e-53 | -8.615850e-47 |
| Msa0428330 | Msa0833450 | 0.835471 | 1.646039e-56 | -8.615850e-47 |
| Msa0431940 | Msa0833450 | 0.843194 | 1.627512e-58 | -8.615850e-47 |
| Msa0434090 | Msa0833450 | -0.811802 | 5.833511e-51 | -8.615850e-47 |
| Msa0448400 | Msa0833450 | 0.810757 | 9.836394e-51 | -8.615850e-47 |
| Msa0456480 | Msa0833450 | 0.839149 | 1.883155e-57 | -8.615850e-47 |
| Msa0475400 | Msa0833450 | 0.808496 | 3.009496e-50 | -8.615850e-47 |
| Msa0477900 | Msa0833450 | -0.818126 | 2.306485e-52 | -8.615850e-47 |
| Msa0481050 | Msa0833450 | 0.810831 | 9.478794e-51 | -8.615850e-47 |
| Msa0246300 | Msa0833450 | 0.804176 | 2.448987e-49 | -8.615850e-47 |
| Msa0256430 | Msa0833450 | 0.810585 | 1.071226e-50 | -8.615850e-47 |
| Msa0260470 | Msa0833450 | 0.818989 | 1.469729e-52 | -8.615850e-47 |
| Msa0270460 | Msa0833450 | 0.860626 | 1.811166e-63 | -8.615850e-47 |
| Msa0281940 | Msa0833450 | 0.810454 | 1.143713e-50 | -8.615850e-47 |
| Msa0304110 | Msa0833450 | 0.815737 | 7.930237e-52 | -8.615850e-47 |
| Msa0309060 | Msa0833450 | 0.853658 | 2.066206e-61 | -8.615850e-47 |
| Msa0317360 | Msa0833450 | 0.831205 | 1.904530e-55 | -8.615850e-47 |
| Msa0341190 | Msa0833450 | 0.826972 | 2.023137e-54 | -8.615850e-47 |
| Msa0343370 | Msa0833450 | 0.806285 | 8.860378e-50 | -8.615850e-47 |
| Msa0500490 | Msa0833450 | 0.819720 | 1.001627e-52 | -8.615850e-47 |
| Msa0520810 | Msa0833450 | 0.827112 | 1.873146e-54 | -8.615850e-47 |
| Msa0521940 | Msa0833450 | -0.874831 | 4.966900e-68 | -8.615850e-47 |
| Msa0547200 | Msa0833450 | -0.815895 | 7.314203e-52 | -8.615850e-47 |
| Msa0549330 | Msa0833450 | 0.830648 | 2.608468e-55 | -8.615850e-47 |
| Msa0555960 | Msa0833450 | 0.840150 | 1.033956e-57 | -8.615850e-47 |
| Msa0579340 | Msa0833450 | 0.801020 | 1.096191e-48 | -8.615850e-47 |
| Msa0579360 | Msa0833450 | 0.803857 | 2.853025e-49 | -8.615850e-47 |
| Msa0580540 | Msa0833450 | 0.962451 | 6.809526e-121 | -8.615850e-47 |
| Msa0587290 | Msa0833450 | 0.821515 | 3.876005e-53 | -8.615850e-47 |
| Msa0601920 | Msa0833450 | -0.820673 | 6.056417e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833450 | MtrunA17_Chr5g0398681 | 97.032 | 438 | 13 | 0 | 1 | 438 | 37 | 474 | 0.0 | 898 |
| Msa0833450 | MtrunA17_Chr5g0398691 | 97.959 | 49 | 1 | 0 | 451 | 499 | 1 | 49 | 2.36e-26 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833450 | AT1G12370.2 | 73.805 | 481 | 118 | 4 | 13 | 486 | 6 | 485 | 0.0 | 760 |
| Msa0833450 | AT1G12370.1 | 72.557 | 481 | 118 | 5 | 13 | 486 | 6 | 479 | 0.0 | 740 |
| Msa0833450 | AT1G12370.3 | 68.191 | 481 | 115 | 5 | 13 | 486 | 6 | 455 | 0.0 | 684 |
Find 136 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTCTTCACTTCTCTTAA+AGG | 0.077903 | 5_4:-6579032 | None:intergenic |
| CTCACAATGTTGTGCCTCTT+TGG | 0.134190 | 5_4:+6579111 | Msa0833450:CDS |
| TTATCTCCCTATTTGCATTT+TGG | 0.174359 | 5_4:+6579663 | Msa0833450:CDS |
| TGTAAACCAACTGCACTTTC+TGG | 0.198914 | 5_4:+6579639 | Msa0833450:CDS |
| AAAATGGATTCTTGACTAAA+AGG | 0.235044 | 5_4:+6579583 | Msa0833450:CDS |
| ATCAACGGTTGAAAGATAAT+TGG | 0.241349 | 5_4:+6578304 | Msa0833450:CDS |
| GGTGCAAAGGCGCGTCATTT+AGG | 0.258100 | 5_4:+6578408 | Msa0833450:CDS |
| ATATACCCGAACTAAGAAAA+AGG | 0.271526 | 5_4:-6578490 | None:intergenic |
| TATCTGTCCAAAATGCAAAT+AGG | 0.281173 | 5_4:-6579670 | None:intergenic |
| GTGCAAAGGCGCGTCATTTA+GGG | 0.286664 | 5_4:+6578409 | Msa0833450:CDS |
| TCATTTAGGGTTTATGCTTA+AGG | 0.317150 | 5_4:+6578422 | Msa0833450:CDS |
| AGTATAGTGCTAGAACAATA+AGG | 0.328544 | 5_4:+6579153 | Msa0833450:CDS |
| TTTCTTGTACAGAATGTATT+GGG | 0.328825 | 5_4:+6580474 | Msa0833450:intron |
| TCACAATGTTGTGCCTCTTT+GGG | 0.330219 | 5_4:+6579112 | Msa0833450:CDS |
| TTGTGAGAGGGTTAGTGATT+TGG | 0.348183 | 5_4:+6579067 | Msa0833450:CDS |
| ATGATATTTGAAGTAGGAAT+AGG | 0.350851 | 5_4:+6581341 | Msa0833450:three_prime_UTR |
| GGGTTCACCGACGGCGAAAT+TGG | 0.356744 | 5_4:-6578213 | None:intergenic |
| CCTGGTAATTTGCCATTGTT+TGG | 0.366651 | 5_4:+6581431 | Msa0833450:three_prime_UTR |
| CATTTAGGGTTTATGCTTAA+GGG | 0.367715 | 5_4:+6578423 | Msa0833450:CDS |
| CAATTGGAGATGGTTCACTA+TGG | 0.369299 | 5_4:+6580255 | Msa0833450:CDS |
| ATCTGTCCAAAATGCAAATA+GGG | 0.371421 | 5_4:-6579669 | None:intergenic |
| AAAGGCTGTAGATACTTTCT+TGG | 0.380747 | 5_4:+6579850 | Msa0833450:intron |
| GCTTTGGAATGCTTCTCAAT+TGG | 0.384572 | 5_4:+6580239 | Msa0833450:intron |
| GCAGTTGGTGGTTCGACATC+AGG | 0.385393 | 5_4:-6579218 | None:intergenic |
| AGAATGTGGAGCTTCACTTT+TGG | 0.385826 | 5_4:+6578995 | Msa0833450:CDS |
| TTGGGTTGCTTCTGAGAAGT+TGG | 0.386676 | 5_4:+6579130 | Msa0833450:CDS |
| CGAACCACCAACTGCGAAAT+GGG | 0.396211 | 5_4:+6579226 | Msa0833450:CDS |
| CGGACCTTGAAAGAAGGTTC+TGG | 0.405636 | 5_4:+6578246 | Msa0833450:CDS |
| CCTGGTAATTTGCCATTGTC+TGG | 0.410925 | 5_4:+6581315 | Msa0833450:three_prime_UTR |
| ATGATACTTGAAGTAGGAAT+AGG | 0.414164 | 5_4:+6581457 | Msa0833450:three_prime_UTR |
| CGGTGAACCCTGGTCGCATT+CGG | 0.415152 | 5_4:+6578226 | Msa0833450:CDS |
| AAACGGGTCCCGTCGTGTAC+TGG | 0.419132 | 5_4:+6578271 | Msa0833450:CDS |
| GGCTCACACCAATCCACTTC+AGG | 0.422837 | 5_4:-6579522 | None:intergenic |
| CATATCTCAAGTGCTTCTTC+AGG | 0.423566 | 5_4:-6580526 | None:intergenic |
| ATATCATTGCTCAAGTGTTA+AGG | 0.423610 | 5_4:+6579282 | Msa0833450:CDS |
| GCATATGTTAATAAAATAGT+TGG | 0.424168 | 5_4:+6581165 | Msa0833450:CDS |
| GGAAAATTTGCTATCTGAAA+AGG | 0.425354 | 5_4:+6581209 | Msa0833450:CDS |
| GTATAGTGCTAGAACAATAA+GGG | 0.425923 | 5_4:+6579154 | Msa0833450:CDS |
| TCCATTGCAGCAATTTCTCC+AGG | 0.429563 | 5_4:-6579543 | None:intergenic |
| TCGAACCACCAACTGCGAAA+TGG | 0.431415 | 5_4:+6579225 | Msa0833450:CDS |
| AACAACGGCAACAGGAACTT+TGG | 0.432053 | 5_4:-6578361 | None:intergenic |
| GAAAGTGCAGTTGGTTTACA+AGG | 0.434713 | 5_4:-6579636 | None:intergenic |
| GGCGAAATTGGCGGCGGCGA+CGG | 0.439771 | 5_4:-6578201 | None:intergenic |
| TTCTTACAGAAGGGAGCAGT+TGG | 0.440949 | 5_4:+6580076 | Msa0833450:intron |
| TGCTGCAATGGAAGTGTTGA+TGG | 0.442384 | 5_4:+6579554 | Msa0833450:CDS |
| TCTTGGAGGAGTTGATTGTT+CGG | 0.444155 | 5_4:+6579867 | Msa0833450:CDS |
| GTTGCACACCTTGCAGTTCA+AGG | 0.450618 | 5_4:+6581508 | Msa0833450:three_prime_UTR |
| ATCAGAGGCGTGGTCGAGTA+AGG | 0.459791 | 5_4:-6579969 | None:intergenic |
| TCAACGGTTGAAAGATAATT+GGG | 0.460189 | 5_4:+6578305 | Msa0833450:CDS |
| ATAAAATAGTTGGTGAGCTC+AGG | 0.462164 | 5_4:+6581175 | Msa0833450:CDS |
| TATATGTGGGGTACATGATC+AGG | 0.462446 | 5_4:+6580731 | Msa0833450:CDS |
| GAAGTAGGAATAGGTTTATG+TGG | 0.462493 | 5_4:+6581350 | Msa0833450:three_prime_UTR |
| GAATAGGTTTATGTGGATTG+TGG | 0.462929 | 5_4:+6581357 | Msa0833450:three_prime_UTR |
| ATTCGATACATGAATTATGA+AGG | 0.471243 | 5_4:+6581108 | Msa0833450:CDS |
| CACCTGACTGCAGTATGAAA+TGG | 0.471472 | 5_4:+6580668 | Msa0833450:intron |
| CTGAGGACCATGTCATAGAC+TGG | 0.473064 | 5_4:+6579255 | Msa0833450:CDS |
| CCTCATTACGATTCATTACA+AGG | 0.477130 | 5_4:+6579923 | Msa0833450:CDS |
| ATGTATATATTTAAATGATA+AGG | 0.477258 | 5_4:+6580546 | Msa0833450:CDS |
| CGCATTCGGACCTTGAAAGA+AGG | 0.484903 | 5_4:+6578240 | Msa0833450:CDS |
| GAAGTGGATTGGTGTGAGCC+TGG | 0.486895 | 5_4:+6579525 | Msa0833450:CDS |
| GGCTGTAGATACTTTCTTGG+AGG | 0.488828 | 5_4:+6579853 | Msa0833450:intron |
| TTTGTTTAGGTATAGTAGCC+TGG | 0.489309 | 5_4:+6581413 | Msa0833450:three_prime_UTR |
| TTCAAGGTCCGAATGCGACC+AGG | 0.496662 | 5_4:-6578234 | None:intergenic |
| GTACATGTTCTTCAATCCTC+AGG | 0.499954 | 5_4:-6581255 | None:intergenic |
| ATGACCCATTTCGCAGTTGG+TGG | 0.500881 | 5_4:-6579230 | None:intergenic |
| TTTGTTTAGGCATAATAGCC+TGG | 0.502839 | 5_4:+6581297 | Msa0833450:three_prime_UTR |
| TCGAAGTTTGTTAGAGAATG+TGG | 0.506846 | 5_4:+6578981 | Msa0833450:CDS |
| CCAGACAATGGCAAATTACC+AGG | 0.508214 | 5_4:-6581315 | None:intergenic |
| CCAAACAATGGCAAATTACC+AGG | 0.508214 | 5_4:-6581431 | None:intergenic |
| GCTACGAGCTTCATATCCTC+AGG | 0.510731 | 5_4:+6579725 | Msa0833450:CDS |
| GAATGCTTCTCAATTGGAGA+TGG | 0.517008 | 5_4:+6580245 | Msa0833450:CDS |
| CTGAGGTTCCTGAAGTGGAT+TGG | 0.525623 | 5_4:+6579514 | Msa0833450:CDS |
| GTGATGACCCATTTCGCAGT+TGG | 0.526232 | 5_4:-6579233 | None:intergenic |
| CATTACAAGGAGCATGGGAG+TGG | 0.527272 | 5_4:+6579936 | Msa0833450:CDS |
| GGCTGCATGTGGTCTATATG+TGG | 0.531306 | 5_4:+6580717 | Msa0833450:CDS |
| ACGATTCATTACAAGGAGCA+TGG | 0.534155 | 5_4:+6579930 | Msa0833450:CDS |
| GACGGTGTGGTAGCCATGAT+CGG | 0.534775 | 5_4:-6578183 | None:intergenic |
| CGATTCATTACAAGGAGCAT+GGG | 0.538381 | 5_4:+6579931 | Msa0833450:CDS |
| GCCGCCGCCAATTTCGCCGT+CGG | 0.538485 | 5_4:+6578206 | Msa0833450:CDS |
| GCCTGGAGAAATTGCTGCAA+TGG | 0.546282 | 5_4:+6579542 | Msa0833450:CDS |
| GCTGAAGTTGGTGACACAAT+TGG | 0.547069 | 5_4:-6578452 | None:intergenic |
| TGGAGCTGAGGTTCCTGAAG+TGG | 0.548511 | 5_4:+6579509 | Msa0833450:CDS |
| CAGAAGGGAGCAGTTGGAGA+AGG | 0.554367 | 5_4:+6580082 | Msa0833450:intron |
| TATATTATAGGGTGAGGCGG+AGG | 0.555525 | 5_4:+6578950 | Msa0833450:intron |
| ACAAGGGTTATTGCGATCTG+TGG | 0.555752 | 5_4:-6579619 | None:intergenic |
| CTAAATTAGGAGTGGAGCTG+AGG | 0.557965 | 5_4:+6579497 | Msa0833450:intron |
| AGGGATCCAAGTGGTTATAA+CGG | 0.559170 | 5_4:+6580696 | Msa0833450:CDS |
| AATTGGAGATGGTTCACTAT+GGG | 0.559765 | 5_4:+6580256 | Msa0833450:CDS |
| CAAATCTGAGATTTGTGAGA+GGG | 0.564185 | 5_4:+6579055 | Msa0833450:CDS |
| TTCACCGACGGCGAAATTGG+CGG | 0.565213 | 5_4:-6578210 | None:intergenic |
| TGAGACCAACTCTTTCGAGT+TGG | 0.565413 | 5_4:-6581552 | None:intergenic |
| GCAAATCTGAGATTTGTGAG+AGG | 0.567196 | 5_4:+6579054 | Msa0833450:CDS |
| TATGAAGAGAATGCTGAAGT+TGG | 0.570021 | 5_4:-6578464 | None:intergenic |
| TTCTCAGAAGCAACCCAAAG+AGG | 0.571605 | 5_4:-6579125 | None:intergenic |
| ATTTCGCCGTCGGTGAACCC+TGG | 0.573219 | 5_4:+6578216 | Msa0833450:CDS |
| CTGAACATCCAGTACACGAC+GGG | 0.574855 | 5_4:-6578279 | None:intergenic |
| AATTGGCGGCGGCGACGGTG+TGG | 0.579274 | 5_4:-6578196 | None:intergenic |
| GATAAACCAGAAAGTGCAGT+TGG | 0.580556 | 5_4:-6579645 | None:intergenic |
| GGGCAAAGAAGATACTTGAA+TGG | 0.580989 | 5_4:+6580494 | Msa0833450:CDS |
| TTCGATACATGAATTATGAA+GGG | 0.582152 | 5_4:+6581109 | Msa0833450:CDS |
| AAGATACTTGAATGGACAAG+AGG | 0.585996 | 5_4:+6580502 | Msa0833450:CDS |
| TGGCTGATGATACTTGAAGT+AGG | 0.588149 | 5_4:+6581451 | Msa0833450:three_prime_UTR |
| GCAGTATGAAATGGATGGGA+GGG | 0.599361 | 5_4:+6580677 | Msa0833450:intron |
| ACCGACGGCGAAATTGGCGG+CGG | 0.601194 | 5_4:-6578207 | None:intergenic |
| TCAAGGTCCGAATGCGACCA+GGG | 0.604948 | 5_4:-6578233 | None:intergenic |
| CCTTGTAATGAATCGTAATG+AGG | 0.611817 | 5_4:-6579923 | None:intergenic |
| GACTGCAGTATGAAATGGAT+GGG | 0.612359 | 5_4:+6580673 | Msa0833450:intron |
| AAATATCATCAGCCAGACAA+TGG | 0.615090 | 5_4:-6581327 | None:intergenic |
| GTTCACTATGGGAAAATGCA+CGG | 0.616114 | 5_4:+6580267 | Msa0833450:CDS |
| TATAGTGCTAGAACAATAAG+GGG | 0.617876 | 5_4:+6579155 | Msa0833450:CDS |
| ATGCAGCCGTTATAACCACT+TGG | 0.618854 | 5_4:-6580702 | None:intergenic |
| GTACTCCAACTCGAAAGAGT+TGG | 0.619582 | 5_4:+6581547 | Msa0833450:three_prime_UTR |
| ATTACAAGGAGCATGGGAGT+GGG | 0.625049 | 5_4:+6579937 | Msa0833450:CDS |
| GTGGTTATAACGGCTGCATG+TGG | 0.626227 | 5_4:+6580706 | Msa0833450:CDS |
| GCTGCATGTGGTCTATATGT+GGG | 0.627943 | 5_4:+6580718 | Msa0833450:CDS |
| AAGTATCATCAGCCAAACAA+TGG | 0.628100 | 5_4:-6581443 | None:intergenic |
| AGTTTCGTCCTTGAACTGCA+AGG | 0.628868 | 5_4:-6581516 | None:intergenic |
| AACATGTGGTCGCTTATCAG+AGG | 0.633768 | 5_4:-6579984 | None:intergenic |
| ATGCGACCAGGGTTCACCGA+CGG | 0.638577 | 5_4:-6578222 | None:intergenic |
| TGGCTGATGATATTTGAAGT+AGG | 0.638889 | 5_4:+6581335 | Msa0833450:three_prime_UTR |
| AAAGTGCAGTTGGTTTACAA+GGG | 0.645680 | 5_4:-6579635 | None:intergenic |
| GCTGCAATGGAAGTGTTGAT+GGG | 0.650703 | 5_4:+6579555 | Msa0833450:CDS |
| TGCAGTATGAAATGGATGGG+AGG | 0.651233 | 5_4:+6580676 | Msa0833450:intron |
| TGAGGACCATGTCATAGACT+GGG | 0.652891 | 5_4:+6579256 | Msa0833450:CDS |
| CTGCATGTGGTCTATATGTG+GGG | 0.661411 | 5_4:+6580719 | Msa0833450:CDS |
| TGACTGCAGTATGAAATGGA+TGG | 0.661718 | 5_4:+6580672 | Msa0833450:intron |
| ACTCCGCTGTTGTAATCCTG+AGG | 0.667646 | 5_4:+6581239 | Msa0833450:CDS |
| TATCATCCCAGTCTATGACA+TGG | 0.679585 | 5_4:-6579262 | None:intergenic |
| GTGGTCGCTTATCAGAGGCG+TGG | 0.687884 | 5_4:-6579979 | None:intergenic |
| AATCCTCAGGATTACAACAG+CGG | 0.707260 | 5_4:-6581242 | None:intergenic |
| ACTGGATGTTCAGAGATCAA+CGG | 0.717235 | 5_4:+6578289 | Msa0833450:CDS |
| TCTGAACATCCAGTACACGA+CGG | 0.720409 | 5_4:-6578280 | None:intergenic |
| TGCGAAATGGGTCATCACTG+AGG | 0.720581 | 5_4:+6579238 | Msa0833450:CDS |
| TGAGCTCAGGAAGAGAAAAG+CGG | 0.732170 | 5_4:+6581188 | Msa0833450:CDS |
| GTGACTCACGTGTAAACATG+TGG | 0.733331 | 5_4:-6579998 | None:intergenic |
| ATGGATGGGAGGGATCCAAG+TGG | 0.761782 | 5_4:+6580687 | Msa0833450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTTATATTATA+GGG | + | chr5_4:6578939-6578958 | Msa0833450:intron | 0.0% |
| !! | AAAATTCAAATTTCAATTAT+AGG | + | chr5_4:6578537-6578556 | Msa0833450:intron | 10.0% |
| !! | ATGTATATATTTAAATGATA+AGG | + | chr5_4:6580546-6580565 | Msa0833450:CDS | 10.0% |
| !!! | ATTTTTTTCTTTCCTAAATT+AGG | + | chr5_4:6579484-6579503 | Msa0833450:intron | 15.0% |
| !! | TTAGGAAAAACAAAATAAAA+CGG | - | chr5_4:6579774-6579793 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTATTCTTACAGA+AGG | + | chr5_4:6580066-6580085 | Msa0833450:intron | 15.0% |
| !!! | TTTTTTTTATTCTTACAGAA+GGG | + | chr5_4:6580067-6580086 | Msa0833450:intron | 15.0% |
| !! | ATCAAACAGATTAAAAACAA+CGG | - | chr5_4:6578379-6578398 | None:intergenic | 20.0% |
| !!! | AATCTGTTTGATAATTTTCT+TGG | + | chr5_4:6578387-6578406 | Msa0833450:CDS | 20.0% |
| !!! | TTATATTTGCGTATTTGTTA+TGG | + | chr5_4:6578844-6578863 | Msa0833450:intron | 20.0% |
| !!! | TATATTTGCGTATTTGTTAT+GGG | + | chr5_4:6578845-6578864 | Msa0833450:intron | 20.0% |
| !!! | TTTTTTTATATTATAGGGTG+AGG | + | chr5_4:6578944-6578963 | Msa0833450:intron | 20.0% |
| !! | TAAGAAATATTAGTGATTGA+AGG | - | chr5_4:6579371-6579390 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTTCCTAAGAAAA+CGG | + | chr5_4:6579779-6579798 | Msa0833450:intron | 20.0% |
| !! | TTTCTCATATTAAAACTACA+TGG | + | chr5_4:6580151-6580170 | Msa0833450:intron | 20.0% |
| !!! | AAATGAAAGGCATTAATATA+GGG | - | chr5_4:6580200-6580219 | None:intergenic | 20.0% |
| !!! | AAAATGAAAGGCATTAATAT+AGG | - | chr5_4:6580201-6580220 | None:intergenic | 20.0% |
| !!! | TAATGCCTTTCATTTTTTTT+TGG | + | chr5_4:6580205-6580224 | Msa0833450:intron | 20.0% |
| !!! | AATGCCTTTCATTTTTTTTT+GGG | + | chr5_4:6580206-6580225 | Msa0833450:intron | 20.0% |
| !! | TAATAAACTTACGATTAGAA+TGG | - | chr5_4:6580340-6580359 | None:intergenic | 20.0% |
| !! | GTATAAAAAAATGAATGTTG+AGG | + | chr5_4:6580825-6580844 | Msa0833450:intron | 20.0% |
| !! | ACCTAATGAATTGTAAAATT+TGG | + | chr5_4:6580958-6580977 | Msa0833450:intron | 20.0% |
| !!! | ACCAAATTTTACAATTCATT+AGG | - | chr5_4:6580962-6580981 | None:intergenic | 20.0% |
| !! | GCATATGTTAATAAAATAGT+TGG | + | chr5_4:6581165-6581184 | Msa0833450:CDS | 20.0% |
| !! | ATATACCCTTTTTCTTAGTT+CGG | + | chr5_4:6578484-6578503 | Msa0833450:CDS | 25.0% |
| !!! | ATATTTGCGTATTTGTTATG+GGG | + | chr5_4:6578846-6578865 | Msa0833450:intron | 25.0% |
| !! | AAAATGGATTCTTGACTAAA+AGG | + | chr5_4:6579583-6579602 | Msa0833450:CDS | 25.0% |
| !!! | TATTTTGTTTTCTAGCTCTA+AGG | + | chr5_4:6580023-6580042 | Msa0833450:intron | 25.0% |
| !!! | AATGAAAGGCATTAATATAG+GGG | - | chr5_4:6580199-6580218 | None:intergenic | 25.0% |
| !!! | ATGCCTTTCATTTTTTTTTG+GGG | + | chr5_4:6580207-6580226 | Msa0833450:intron | 25.0% |
| ! | ATTCATCAAAACAGTTTACT+TGG | + | chr5_4:6580389-6580408 | Msa0833450:intron | 25.0% |
| ! | CATATAATCTCTTTCTCTAT+TGG | + | chr5_4:6580416-6580435 | Msa0833450:intron | 25.0% |
| !! | TTTTCTTGTACAGAATGTAT+TGG | + | chr5_4:6580473-6580492 | Msa0833450:intron | 25.0% |
| ! | TTTCTTGTACAGAATGTATT+GGG | + | chr5_4:6580474-6580493 | Msa0833450:intron | 25.0% |
| !!! | ACAGTTTAATTTGAATGTTG+AGG | + | chr5_4:6580781-6580800 | Msa0833450:intron | 25.0% |
| !!! | CATTTTTTTATACATCCAAC+AGG | - | chr5_4:6580818-6580837 | None:intergenic | 25.0% |
| !! | TAGGTTCTAATGAAATTAGA+AGG | - | chr5_4:6580943-6580962 | None:intergenic | 25.0% |
| !! | TTTGTGTTTCTATTCATTTC+AGG | + | chr5_4:6581056-6581075 | Msa0833450:intron | 25.0% |
| !! | TTGTGTTTCTATTCATTTCA+GGG | + | chr5_4:6581057-6581076 | Msa0833450:intron | 25.0% |
| !! | TATCGAATTTTCCCAAAAAT+GGG | - | chr5_4:6581096-6581115 | None:intergenic | 25.0% |
| ! | ATTCGATACATGAATTATGA+AGG | + | chr5_4:6581108-6581127 | Msa0833450:CDS | 25.0% |
| ! | TTCGATACATGAATTATGAA+GGG | + | chr5_4:6581109-6581128 | Msa0833450:CDS | 25.0% |
| !!! | TCTAGACATCTTTTTTGTTT+AGG | + | chr5_4:6581284-6581303 | Msa0833450:three_prime_UTR | 25.0% |
| !! | ATGATATTTGAAGTAGGAAT+AGG | + | chr5_4:6581341-6581360 | Msa0833450:three_prime_UTR | 25.0% |
| !!! | TGCACTAATCTTTTTTGTTT+AGG | + | chr5_4:6581400-6581419 | Msa0833450:three_prime_UTR | 25.0% |
| ATCAACGGTTGAAAGATAAT+TGG | + | chr5_4:6578304-6578323 | Msa0833450:CDS | 30.0% | |
| TCAACGGTTGAAAGATAATT+GGG | + | chr5_4:6578305-6578324 | Msa0833450:CDS | 30.0% | |
| !! | TGATAATTTTCTTGGTGCAA+AGG | + | chr5_4:6578395-6578414 | Msa0833450:CDS | 30.0% |
| ! | TCATTTAGGGTTTATGCTTA+AGG | + | chr5_4:6578422-6578441 | Msa0833450:CDS | 30.0% |
| ! | CATTTAGGGTTTATGCTTAA+GGG | + | chr5_4:6578423-6578442 | Msa0833450:CDS | 30.0% |
| ! | TATACCCTTTTTCTTAGTTC+GGG | + | chr5_4:6578485-6578504 | Msa0833450:CDS | 30.0% |
| TATACCCGAACTAAGAAAAA+GGG | - | chr5_4:6578492-6578511 | None:intergenic | 30.0% | |
| ATATACCCGAACTAAGAAAA+AGG | - | chr5_4:6578493-6578512 | None:intergenic | 30.0% | |
| AAATGTCGATATTGTTATGC+TGG | + | chr5_4:6578634-6578653 | Msa0833450:intron | 30.0% | |
| !! | TATTTGCGTATTTGTTATGG+GGG | + | chr5_4:6578847-6578866 | Msa0833450:intron | 30.0% |
| ! | TTTTATATTATAGGGTGAGG+CGG | + | chr5_4:6578947-6578966 | Msa0833450:intron | 30.0% |
| CATTTCTTCACTTCTCTTAA+AGG | - | chr5_4:6579035-6579054 | None:intergenic | 30.0% | |
| AGTATAGTGCTAGAACAATA+AGG | + | chr5_4:6579153-6579172 | Msa0833450:CDS | 30.0% | |
| GTATAGTGCTAGAACAATAA+GGG | + | chr5_4:6579154-6579173 | Msa0833450:CDS | 30.0% | |
| TATAGTGCTAGAACAATAAG+GGG | + | chr5_4:6579155-6579174 | Msa0833450:CDS | 30.0% | |
| ATATCATTGCTCAAGTGTTA+AGG | + | chr5_4:6579282-6579301 | Msa0833450:CDS | 30.0% | |
| TTTCTTTCCTAAATTAGGAG+TGG | + | chr5_4:6579489-6579508 | Msa0833450:intron | 30.0% | |
| ! | TTATCTCCCTATTTGCATTT+TGG | + | chr5_4:6579663-6579682 | Msa0833450:CDS | 30.0% |
| ATCTGTCCAAAATGCAAATA+GGG | - | chr5_4:6579672-6579691 | None:intergenic | 30.0% | |
| TATCTGTCCAAAATGCAAAT+AGG | - | chr5_4:6579673-6579692 | None:intergenic | 30.0% | |
| ! | CTTTTTCTGTTCTTCAATGT+TGG | + | chr5_4:6579824-6579843 | Msa0833450:intron | 30.0% |
| TTGCCCCAAAAAAAAATGAA+AGG | - | chr5_4:6580213-6580232 | None:intergenic | 30.0% | |
| !!! | AGTTATTGCCTCCTTTTTTT+TGG | + | chr5_4:6580314-6580333 | Msa0833450:intron | 30.0% |
| GATTAGAATGGCCAAAAAAA+AGG | - | chr5_4:6580328-6580347 | None:intergenic | 30.0% | |
| ! | TTCTCTACAATGTTGACTAA+TGG | - | chr5_4:6580582-6580601 | None:intergenic | 30.0% |
| !! | AGTTTGTTTTCATGAGATGA+AGG | + | chr5_4:6580621-6580640 | Msa0833450:intron | 30.0% |
| !!! | TTTTTTGTGTGAAGTGCTTT+TGG | + | chr5_4:6580863-6580882 | Msa0833450:intron | 30.0% |
| CAAATCAGTTCCACATAAAA+TGG | - | chr5_4:6580914-6580933 | None:intergenic | 30.0% | |
| !! | ATTGTAAAATTTGGTGTTGC+AGG | + | chr5_4:6580967-6580986 | Msa0833450:intron | 30.0% |
| ! | CTTCAAGATTTCTGAGTTTT+TGG | + | chr5_4:6581031-6581050 | Msa0833450:intron | 30.0% |
| ! | TGTGTTTCTATTCATTTCAG+GGG | + | chr5_4:6581058-6581077 | Msa0833450:intron | 30.0% |
| ! | GTATCGAATTTTCCCAAAAA+TGG | - | chr5_4:6581097-6581116 | None:intergenic | 30.0% |
| !! | GGAAAATTTGCTATCTGAAA+AGG | + | chr5_4:6581209-6581228 | Msa0833450:CDS | 30.0% |
| ATGATACTTGAAGTAGGAAT+AGG | + | chr5_4:6581457-6581476 | Msa0833450:three_prime_UTR | 30.0% | |
| GTCTCATTGACATTAAAAAG+AGG | + | chr5_4:6581569-6581588 | Msa0833450:three_prime_UTR | 30.0% | |
| ! | TTTTCCAGAACCTTCTTTCA+AGG | - | chr5_4:6578253-6578272 | None:intergenic | 35.0% |
| !! | GAAAGAAGGTTCTGGAAAAA+CGG | + | chr5_4:6578254-6578273 | Msa0833450:CDS | 35.0% |
| !! | AAAGAAGGTTCTGGAAAAAC+GGG | + | chr5_4:6578255-6578274 | Msa0833450:CDS | 35.0% |
| AGATTAAAAACAACGGCAAC+AGG | - | chr5_4:6578372-6578391 | None:intergenic | 35.0% | |
| TATGAAGAGAATGCTGAAGT+TGG | - | chr5_4:6578467-6578486 | None:intergenic | 35.0% | |
| AGAGTAAATGAGAGACAAAG+TGG | - | chr5_4:6578705-6578724 | None:intergenic | 35.0% | |
| TTTGACAGTAAGTCATAACC+AGG | - | chr5_4:6578767-6578786 | None:intergenic | 35.0% | |
| CCTGACATCATTCATAACTA+GGG | + | chr5_4:6578821-6578840 | Msa0833450:intron | 35.0% | |
| !! | TCGAAGTTTGTTAGAGAATG+TGG | + | chr5_4:6578981-6579000 | Msa0833450:CDS | 35.0% |
| ! | CAAATCTGAGATTTGTGAGA+GGG | + | chr5_4:6579055-6579074 | Msa0833450:CDS | 35.0% |
| ! | GTGTTGATGGGAAGTAAAAA+TGG | + | chr5_4:6579567-6579586 | Msa0833450:CDS | 35.0% |
| ! | AAAGTGCAGTTGGTTTACAA+GGG | - | chr5_4:6579638-6579657 | None:intergenic | 35.0% |
| AGCATAGTAAAACAAACCTG+AGG | - | chr5_4:6579744-6579763 | None:intergenic | 35.0% | |
| ! | TAAGATCTCACCGTTTTCTT+AGG | - | chr5_4:6579792-6579811 | None:intergenic | 35.0% |
| AAAACGGTGAGATCTTATCT+TGG | + | chr5_4:6579795-6579814 | Msa0833450:intron | 35.0% | |
| GTTCTTCAATGTTGGTGTAA+AGG | + | chr5_4:6579832-6579851 | Msa0833450:intron | 35.0% | |
| AAAGGCTGTAGATACTTTCT+TGG | + | chr5_4:6579850-6579869 | Msa0833450:intron | 35.0% | |
| CCTTGTAATGAATCGTAATG+AGG | - | chr5_4:6579926-6579945 | None:intergenic | 35.0% | |
| CCTCATTACGATTCATTACA+AGG | + | chr5_4:6579923-6579942 | Msa0833450:CDS | 35.0% | |
| TCCTGTAAGCTAATCTTTCA+TGG | + | chr5_4:6580118-6580137 | Msa0833450:intron | 35.0% | |
| !! | TCCATGAAAGATTAGCTTAC+AGG | - | chr5_4:6580122-6580141 | None:intergenic | 35.0% |
| AATTGGAGATGGTTCACTAT+GGG | + | chr5_4:6580256-6580275 | Msa0833450:CDS | 35.0% | |
| TAGAATGGCCAAAAAAAAGG+AGG | - | chr5_4:6580325-6580344 | None:intergenic | 35.0% | |
| AAGATACTTGAATGGACAAG+AGG | + | chr5_4:6580502-6580521 | Msa0833450:CDS | 35.0% | |
| ! | TGTGGTAGTTCCATTTTATG+TGG | + | chr5_4:6580901-6580920 | Msa0833450:intron | 35.0% |
| !! | ATAAAATAGTTGGTGAGCTC+AGG | + | chr5_4:6581175-6581194 | Msa0833450:CDS | 35.0% |
| TTTGTTTAGGCATAATAGCC+TGG | + | chr5_4:6581297-6581316 | Msa0833450:three_prime_UTR | 35.0% | |
| AAATATCATCAGCCAGACAA+TGG | - | chr5_4:6581330-6581349 | None:intergenic | 35.0% | |
| ! | TGGCTGATGATATTTGAAGT+AGG | + | chr5_4:6581335-6581354 | Msa0833450:three_prime_UTR | 35.0% |
| GAAGTAGGAATAGGTTTATG+TGG | + | chr5_4:6581350-6581369 | Msa0833450:three_prime_UTR | 35.0% | |
| ! | GAATAGGTTTATGTGGATTG+TGG | + | chr5_4:6581357-6581376 | Msa0833450:three_prime_UTR | 35.0% |
| TTTGTTTAGGTATAGTAGCC+TGG | + | chr5_4:6581413-6581432 | Msa0833450:three_prime_UTR | 35.0% | |
| AAGTATCATCAGCCAAACAA+TGG | - | chr5_4:6581446-6581465 | None:intergenic | 35.0% | |
| GCAACAAAAATCTCCGATCA+TGG | + | chr5_4:6578170-6578189 | Msa0833450:exon | 40.0% | |
| ACTGGATGTTCAGAGATCAA+CGG | + | chr5_4:6578289-6578308 | Msa0833450:CDS | 40.0% | |
| ATATTGTTATGCTGGATGCG+AGG | + | chr5_4:6578642-6578661 | Msa0833450:intron | 40.0% | |
| TATTGTTATGCTGGATGCGA+GGG | + | chr5_4:6578643-6578662 | Msa0833450:intron | 40.0% | |
| CATCTTAAAGTCACACTCAG+TGG | - | chr5_4:6578675-6578694 | None:intergenic | 40.0% | |
| AAACATGACATAGAGTGACC+TGG | + | chr5_4:6578746-6578765 | Msa0833450:intron | 40.0% | |
| ATGAATGATGTCAGGCAACT+TGG | - | chr5_4:6578816-6578835 | None:intergenic | 40.0% | |
| GCCTGACATCATTCATAACT+AGG | + | chr5_4:6578820-6578839 | Msa0833450:intron | 40.0% | |
| CCCTAGTTATGAATGATGTC+AGG | - | chr5_4:6578824-6578843 | None:intergenic | 40.0% | |
| ATTAGCCCTGTGAAATTGTC+CGG | - | chr5_4:6578885-6578904 | None:intergenic | 40.0% | |
| GACAATTTCACAGGGCTAAT+TGG | + | chr5_4:6578885-6578904 | Msa0833450:intron | 40.0% | |
| ! | AGAATGTGGAGCTTCACTTT+TGG | + | chr5_4:6578995-6579014 | Msa0833450:CDS | 40.0% |
| ! | GCAAATCTGAGATTTGTGAG+AGG | + | chr5_4:6579054-6579073 | Msa0833450:CDS | 40.0% |
| ! | TTGTGAGAGGGTTAGTGATT+TGG | + | chr5_4:6579067-6579086 | Msa0833450:CDS | 40.0% |
| TCACAATGTTGTGCCTCTTT+GGG | + | chr5_4:6579112-6579131 | Msa0833450:CDS | 40.0% | |
| TATCATCCCAGTCTATGACA+TGG | - | chr5_4:6579265-6579284 | None:intergenic | 40.0% | |
| !! | TTATGTAGCACCGACAGATA+TGG | + | chr5_4:6579342-6579361 | Msa0833450:intron | 40.0% |
| TTGAAGGCAACCATATCTGT+CGG | - | chr5_4:6579355-6579374 | None:intergenic | 40.0% | |
| ACTGACACTGACATTAGACA+CGG | - | chr5_4:6579420-6579439 | None:intergenic | 40.0% | |
| ! | GAAAGTGCAGTTGGTTTACA+AGG | - | chr5_4:6579639-6579658 | None:intergenic | 40.0% |
| TGTAAACCAACTGCACTTTC+TGG | + | chr5_4:6579639-6579658 | Msa0833450:CDS | 40.0% | |
| ! | GATAAACCAGAAAGTGCAGT+TGG | - | chr5_4:6579648-6579667 | None:intergenic | 40.0% |
| ! | TCTTGGAGGAGTTGATTGTT+CGG | + | chr5_4:6579867-6579886 | Msa0833450:CDS | 40.0% |
| ACGATTCATTACAAGGAGCA+TGG | + | chr5_4:6579930-6579949 | Msa0833450:CDS | 40.0% | |
| ! | CGATTCATTACAAGGAGCAT+GGG | + | chr5_4:6579931-6579950 | Msa0833450:CDS | 40.0% |
| ! | TTTGGGGCAAATATCAGCTT+TGG | + | chr5_4:6580223-6580242 | Msa0833450:intron | 40.0% |
| !! | GCTTTGGAATGCTTCTCAAT+TGG | + | chr5_4:6580239-6580258 | Msa0833450:intron | 40.0% |
| GAATGCTTCTCAATTGGAGA+TGG | + | chr5_4:6580245-6580264 | Msa0833450:CDS | 40.0% | |
| CAATTGGAGATGGTTCACTA+TGG | + | chr5_4:6580255-6580274 | Msa0833450:CDS | 40.0% | |
| GTTCACTATGGGAAAATGCA+CGG | + | chr5_4:6580267-6580286 | Msa0833450:CDS | 40.0% | |
| !! | GGAAAATGCACGGTTTTATG+CGG | + | chr5_4:6580277-6580296 | Msa0833450:CDS | 40.0% |
| GGGCAAAGAAGATACTTGAA+TGG | + | chr5_4:6580494-6580513 | Msa0833450:CDS | 40.0% | |
| CATATCTCAAGTGCTTCTTC+AGG | - | chr5_4:6580529-6580548 | None:intergenic | 40.0% | |
| ATCCATTTCATACTGCAGTC+AGG | - | chr5_4:6580673-6580692 | None:intergenic | 40.0% | |
| TGACTGCAGTATGAAATGGA+TGG | + | chr5_4:6580672-6580691 | Msa0833450:intron | 40.0% | |
| GACTGCAGTATGAAATGGAT+GGG | + | chr5_4:6580673-6580692 | Msa0833450:intron | 40.0% | |
| AGGGATCCAAGTGGTTATAA+CGG | + | chr5_4:6580696-6580715 | Msa0833450:CDS | 40.0% | |
| TATATGTGGGGTACATGATC+AGG | + | chr5_4:6580731-6580750 | Msa0833450:CDS | 40.0% | |
| GTAGCAAACAAGAACAAAGC+AGG | - | chr5_4:6580761-6580780 | None:intergenic | 40.0% | |
| GTTTCTATTCATTTCAGGGG+TGG | + | chr5_4:6581061-6581080 | Msa0833450:intron | 40.0% | |
| AATCCTCAGGATTACAACAG+CGG | - | chr5_4:6581245-6581264 | None:intergenic | 40.0% | |
| GTACATGTTCTTCAATCCTC+AGG | - | chr5_4:6581258-6581277 | None:intergenic | 40.0% | |
| CCAAACAATGGCAAATTACC+AGG | - | chr5_4:6581434-6581453 | None:intergenic | 40.0% | |
| ! | CCTGGTAATTTGCCATTGTT+TGG | + | chr5_4:6581431-6581450 | Msa0833450:three_prime_UTR | 40.0% |
| TGGCTGATGATACTTGAAGT+AGG | + | chr5_4:6581451-6581470 | Msa0833450:three_prime_UTR | 40.0% | |
| ! | AGATTTTTGTTGCGTGGCGT+AGG | - | chr5_4:6578163-6578182 | None:intergenic | 45.0% |
| ! | GATCGGAGATTTTTGTTGCG+TGG | - | chr5_4:6578169-6578188 | None:intergenic | 45.0% |
| TCTGAACATCCAGTACACGA+CGG | - | chr5_4:6578283-6578302 | None:intergenic | 45.0% | |
| AACAACGGCAACAGGAACTT+TGG | - | chr5_4:6578364-6578383 | None:intergenic | 45.0% | |
| !! | GCTGAAGTTGGTGACACAAT+TGG | - | chr5_4:6578455-6578474 | None:intergenic | 45.0% |
| TAAAGTCACACTCAGTGGCA+AGG | - | chr5_4:6578670-6578689 | None:intergenic | 45.0% | |
| TATATTATAGGGTGAGGCGG+AGG | + | chr5_4:6578950-6578969 | Msa0833450:intron | 45.0% | |
| CTCACAATGTTGTGCCTCTT+TGG | + | chr5_4:6579111-6579130 | Msa0833450:CDS | 45.0% | |
| TTCTCAGAAGCAACCCAAAG+AGG | - | chr5_4:6579128-6579147 | None:intergenic | 45.0% | |
| ! | TTGGGTTGCTTCTGAGAAGT+TGG | + | chr5_4:6579130-6579149 | Msa0833450:CDS | 45.0% |
| TGAGGACCATGTCATAGACT+GGG | + | chr5_4:6579256-6579275 | Msa0833450:CDS | 45.0% | |
| AGACACGGCTGACAATAAGA+CGG | - | chr5_4:6579405-6579424 | None:intergenic | 45.0% | |
| TGTCAGTGCGAAGATTCACA+TGG | + | chr5_4:6579433-6579452 | Msa0833450:intron | 45.0% | |
| CTCAGCTCCACTCCTAATTT+AGG | - | chr5_4:6579499-6579518 | None:intergenic | 45.0% | |
| CTAAATTAGGAGTGGAGCTG+AGG | + | chr5_4:6579497-6579516 | Msa0833450:intron | 45.0% | |
| TCCATTGCAGCAATTTCTCC+AGG | - | chr5_4:6579546-6579565 | None:intergenic | 45.0% | |
| !! | TGCTGCAATGGAAGTGTTGA+TGG | + | chr5_4:6579554-6579573 | Msa0833450:CDS | 45.0% |
| !! | GCTGCAATGGAAGTGTTGAT+GGG | + | chr5_4:6579555-6579574 | Msa0833450:CDS | 45.0% |
| ACAAGGGTTATTGCGATCTG+TGG | - | chr5_4:6579622-6579641 | None:intergenic | 45.0% | |
| GGCTGTAGATACTTTCTTGG+AGG | + | chr5_4:6579853-6579872 | Msa0833450:intron | 45.0% | |
| ! | ATTACAAGGAGCATGGGAGT+GGG | + | chr5_4:6579937-6579956 | Msa0833450:CDS | 45.0% |
| AACATGTGGTCGCTTATCAG+AGG | - | chr5_4:6579987-6580006 | None:intergenic | 45.0% | |
| GTGACTCACGTGTAAACATG+TGG | - | chr5_4:6580001-6580020 | None:intergenic | 45.0% | |
| TTCTTACAGAAGGGAGCAGT+TGG | + | chr5_4:6580076-6580095 | Msa0833450:intron | 45.0% | |
| CACCTGACTGCAGTATGAAA+TGG | + | chr5_4:6580668-6580687 | Msa0833450:intron | 45.0% | |
| TGCAGTATGAAATGGATGGG+AGG | + | chr5_4:6580676-6580695 | Msa0833450:intron | 45.0% | |
| GCAGTATGAAATGGATGGGA+GGG | + | chr5_4:6580677-6580696 | Msa0833450:intron | 45.0% | |
| ATGCAGCCGTTATAACCACT+TGG | - | chr5_4:6580705-6580724 | None:intergenic | 45.0% | |
| GCTGCATGTGGTCTATATGT+GGG | + | chr5_4:6580718-6580737 | Msa0833450:CDS | 45.0% | |
| CTGCATGTGGTCTATATGTG+GGG | + | chr5_4:6580719-6580738 | Msa0833450:CDS | 45.0% | |
| GAGGAATTTCTGACTCCTGT+TGG | + | chr5_4:6580800-6580819 | Msa0833450:intron | 45.0% | |
| TGAGCTCAGGAAGAGAAAAG+CGG | + | chr5_4:6581188-6581207 | Msa0833450:CDS | 45.0% | |
| CCAGACAATGGCAAATTACC+AGG | - | chr5_4:6581318-6581337 | None:intergenic | 45.0% | |
| ! | CCTGGTAATTTGCCATTGTC+TGG | + | chr5_4:6581315-6581334 | Msa0833450:three_prime_UTR | 45.0% |
| AGTTTCGTCCTTGAACTGCA+AGG | - | chr5_4:6581519-6581538 | None:intergenic | 45.0% | |
| GTACTCCAACTCGAAAGAGT+TGG | + | chr5_4:6581547-6581566 | Msa0833450:three_prime_UTR | 45.0% | |
| ! | TGAGACCAACTCTTTCGAGT+TGG | - | chr5_4:6581555-6581574 | None:intergenic | 45.0% |
| !!! | GATTTTTTTTTTTATATTAT+AGG | + | chr5_4:6578938-6578957 | Msa0833450:intron | 5.0% |
| CGCATTCGGACCTTGAAAGA+AGG | + | chr5_4:6578240-6578259 | Msa0833450:CDS | 50.0% | |
| CGGACCTTGAAAGAAGGTTC+TGG | + | chr5_4:6578246-6578265 | Msa0833450:CDS | 50.0% | |
| CTGAACATCCAGTACACGAC+GGG | - | chr5_4:6578282-6578301 | None:intergenic | 50.0% | |
| ! | GTGCAAAGGCGCGTCATTTA+GGG | + | chr5_4:6578409-6578428 | Msa0833450:CDS | 50.0% |
| TCGAGCCGGACAATTTCACA+GGG | + | chr5_4:6578877-6578896 | Msa0833450:intron | 50.0% | |
| TCGAACCACCAACTGCGAAA+TGG | + | chr5_4:6579225-6579244 | Msa0833450:CDS | 50.0% | |
| CGAACCACCAACTGCGAAAT+GGG | + | chr5_4:6579226-6579245 | Msa0833450:CDS | 50.0% | |
| ATGACCCATTTCGCAGTTGG+TGG | - | chr5_4:6579233-6579252 | None:intergenic | 50.0% | |
| GTGATGACCCATTTCGCAGT+TGG | - | chr5_4:6579236-6579255 | None:intergenic | 50.0% | |
| TGCGAAATGGGTCATCACTG+AGG | + | chr5_4:6579238-6579257 | Msa0833450:CDS | 50.0% | |
| CTGAGGACCATGTCATAGAC+TGG | + | chr5_4:6579255-6579274 | Msa0833450:CDS | 50.0% | |
| CTGAGGTTCCTGAAGTGGAT+TGG | + | chr5_4:6579514-6579533 | Msa0833450:CDS | 50.0% | |
| GCCTGGAGAAATTGCTGCAA+TGG | + | chr5_4:6579542-6579561 | Msa0833450:CDS | 50.0% | |
| GCTACGAGCTTCATATCCTC+AGG | + | chr5_4:6579725-6579744 | Msa0833450:CDS | 50.0% | |
| ! | CATTACAAGGAGCATGGGAG+TGG | + | chr5_4:6579936-6579955 | Msa0833450:CDS | 50.0% |
| GTGGTTATAACGGCTGCATG+TGG | + | chr5_4:6580706-6580725 | Msa0833450:CDS | 50.0% | |
| GGCTGCATGTGGTCTATATG+TGG | + | chr5_4:6580717-6580736 | Msa0833450:CDS | 50.0% | |
| !!! | TGCTTTTGGTGCCTCTAGCT+AGG | + | chr5_4:6580877-6580896 | Msa0833450:intron | 50.0% |
| AACTACCACAGCCTAGCTAG+AGG | - | chr5_4:6580891-6580910 | None:intergenic | 50.0% | |
| ACTCCGCTGTTGTAATCCTG+AGG | + | chr5_4:6581239-6581258 | Msa0833450:CDS | 50.0% | |
| GTTGCACACCTTGCAGTTCA+AGG | + | chr5_4:6581508-6581527 | Msa0833450:three_prime_UTR | 50.0% | |
| GACGGTGTGGTAGCCATGAT+CGG | - | chr5_4:6578186-6578205 | None:intergenic | 55.0% | |
| TTCACCGACGGCGAAATTGG+CGG | - | chr5_4:6578213-6578232 | None:intergenic | 55.0% | |
| TCAAGGTCCGAATGCGACCA+GGG | - | chr5_4:6578236-6578255 | None:intergenic | 55.0% | |
| TTCAAGGTCCGAATGCGACC+AGG | - | chr5_4:6578237-6578256 | None:intergenic | 55.0% | |
| ! | GGTGCAAAGGCGCGTCATTT+AGG | + | chr5_4:6578408-6578427 | Msa0833450:CDS | 55.0% |
| ATGGGGGTAATTGCTCGAGC+CGG | + | chr5_4:6578863-6578882 | Msa0833450:intron | 55.0% | |
| CTCGAGCCGGACAATTTCAC+AGG | + | chr5_4:6578876-6578895 | Msa0833450:intron | 55.0% | |
| !! | GCAGTTGGTGGTTCGACATC+AGG | - | chr5_4:6579221-6579240 | None:intergenic | 55.0% |
| TGGAGCTGAGGTTCCTGAAG+TGG | + | chr5_4:6579509-6579528 | Msa0833450:CDS | 55.0% | |
| GGCTCACACCAATCCACTTC+AGG | - | chr5_4:6579525-6579544 | None:intergenic | 55.0% | |
| !! | GAAGTGGATTGGTGTGAGCC+TGG | + | chr5_4:6579525-6579544 | Msa0833450:CDS | 55.0% |
| ! | ATCAGAGGCGTGGTCGAGTA+AGG | - | chr5_4:6579972-6579991 | None:intergenic | 55.0% |
| CAGAAGGGAGCAGTTGGAGA+AGG | + | chr5_4:6580082-6580101 | Msa0833450:intron | 55.0% | |
| ATGGATGGGAGGGATCCAAG+TGG | + | chr5_4:6580687-6580706 | Msa0833450:CDS | 55.0% | |
| !!! | TGGCGAGAGCGTCCCATTTT+TGG | + | chr5_4:6581081-6581100 | Msa0833450:CDS | 55.0% |
| !!! | GGCGAGAGCGTCCCATTTTT+GGG | + | chr5_4:6581082-6581101 | Msa0833450:CDS | 55.0% |
| GGGTTCACCGACGGCGAAAT+TGG | - | chr5_4:6578216-6578235 | None:intergenic | 60.0% | |
| ATTTCGCCGTCGGTGAACCC+TGG | + | chr5_4:6578216-6578235 | Msa0833450:CDS | 60.0% | |
| ATGCGACCAGGGTTCACCGA+CGG | - | chr5_4:6578225-6578244 | None:intergenic | 60.0% | |
| CGGTGAACCCTGGTCGCATT+CGG | + | chr5_4:6578226-6578245 | Msa0833450:CDS | 60.0% | |
| AAACGGGTCCCGTCGTGTAC+TGG | + | chr5_4:6578271-6578290 | Msa0833450:CDS | 60.0% | |
| GTGGTCGCTTATCAGAGGCG+TGG | - | chr5_4:6579982-6580001 | None:intergenic | 60.0% | |
| TGGTGCCTCTAGCTAGGCTG+TGG | + | chr5_4:6580883-6580902 | Msa0833450:intron | 60.0% | |
| ACCGACGGCGAAATTGGCGG+CGG | - | chr5_4:6578210-6578229 | None:intergenic | 65.0% | |
| AATTGGCGGCGGCGACGGTG+TGG | - | chr5_4:6578199-6578218 | None:intergenic | 70.0% | |
| GGCGAAATTGGCGGCGGCGA+CGG | - | chr5_4:6578204-6578223 | None:intergenic | 70.0% | |
| GCCGCCGCCAATTTCGCCGT+CGG | + | chr5_4:6578206-6578225 | Msa0833450:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 6578147 | 6581689 | 6578147 | ID=Msa0833450;Name=Msa0833450 |
| chr5_4 | mRNA | 6578147 | 6581689 | 6578147 | ID=Msa0833450-mRNA-1;Parent=Msa0833450;Name=Msa0833450-mRNA-1;_AED=0.12;_eAED=0.12;_QI=42|1|1|1|1|1|9|423|499 |
| chr5_4 | exon | 6578147 | 6578506 | 6578147 | ID=Msa0833450-mRNA-1:exon:2860;Parent=Msa0833450-mRNA-1 |
| chr5_4 | exon | 6578960 | 6579303 | 6578960 | ID=Msa0833450-mRNA-1:exon:2861;Parent=Msa0833450-mRNA-1 |
| chr5_4 | exon | 6579506 | 6579746 | 6579506 | ID=Msa0833450-mRNA-1:exon:2862;Parent=Msa0833450-mRNA-1 |
| chr5_4 | exon | 6579854 | 6580011 | 6579854 | ID=Msa0833450-mRNA-1:exon:2863;Parent=Msa0833450-mRNA-1 |
| chr5_4 | exon | 6580085 | 6580121 | 6580085 | ID=Msa0833450-mRNA-1:exon:2864;Parent=Msa0833450-mRNA-1 |
| chr5_4 | exon | 6580240 | 6580298 | 6580240 | ID=Msa0833450-mRNA-1:exon:2865;Parent=Msa0833450-mRNA-1 |
| chr5_4 | exon | 6580486 | 6580567 | 6580486 | ID=Msa0833450-mRNA-1:exon:2866;Parent=Msa0833450-mRNA-1 |
| chr5_4 | exon | 6580681 | 6580752 | 6580681 | ID=Msa0833450-mRNA-1:exon:2867;Parent=Msa0833450-mRNA-1 |
| chr5_4 | exon | 6581078 | 6581689 | 6581078 | ID=Msa0833450-mRNA-1:exon:2868;Parent=Msa0833450-mRNA-1 |
| chr5_4 | five_prime_UTR | 6578147 | 6578188 | 6578147 | ID=Msa0833450-mRNA-1:five_prime_utr;Parent=Msa0833450-mRNA-1 |
| chr5_4 | CDS | 6578189 | 6578506 | 6578189 | ID=Msa0833450-mRNA-1:cds;Parent=Msa0833450-mRNA-1 |
| chr5_4 | CDS | 6578960 | 6579303 | 6578960 | ID=Msa0833450-mRNA-1:cds;Parent=Msa0833450-mRNA-1 |
| chr5_4 | CDS | 6579506 | 6579746 | 6579506 | ID=Msa0833450-mRNA-1:cds;Parent=Msa0833450-mRNA-1 |
| chr5_4 | CDS | 6579854 | 6580011 | 6579854 | ID=Msa0833450-mRNA-1:cds;Parent=Msa0833450-mRNA-1 |
| chr5_4 | CDS | 6580085 | 6580121 | 6580085 | ID=Msa0833450-mRNA-1:cds;Parent=Msa0833450-mRNA-1 |
| chr5_4 | CDS | 6580240 | 6580298 | 6580240 | ID=Msa0833450-mRNA-1:cds;Parent=Msa0833450-mRNA-1 |
| chr5_4 | CDS | 6580486 | 6580567 | 6580486 | ID=Msa0833450-mRNA-1:cds;Parent=Msa0833450-mRNA-1 |
| chr5_4 | CDS | 6580681 | 6580752 | 6580681 | ID=Msa0833450-mRNA-1:cds;Parent=Msa0833450-mRNA-1 |
| chr5_4 | CDS | 6581078 | 6581266 | 6581078 | ID=Msa0833450-mRNA-1:cds;Parent=Msa0833450-mRNA-1 |
| chr5_4 | three_prime_UTR | 6581267 | 6581689 | 6581267 | ID=Msa0833450-mRNA-1:three_prime_utr;Parent=Msa0833450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
