Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580540 | XP_003611237.2 | 97.395 | 499 | 13 | 0 | 1 | 499 | 1 | 499 | 0.0 | 1022 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580540 | sp|Q9SB00|PHR_ARATH | 73.805 | 481 | 118 | 4 | 13 | 486 | 6 | 485 | 0.0 | 760 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580540 | G7KG67 | 97.395 | 499 | 13 | 0 | 1 | 499 | 1 | 499 | 0.0 | 1022 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa0580540 | 0.805251 | 1.461064e-49 | -8.615850e-47 |
| Msa0005690 | Msa0580540 | 0.817824 | 2.698667e-52 | -8.615850e-47 |
| Msa0006820 | Msa0580540 | 0.805268 | 1.449302e-49 | -8.615850e-47 |
| Msa0018470 | Msa0580540 | 0.809074 | 2.264302e-50 | -8.615850e-47 |
| Msa0020320 | Msa0580540 | 0.806807 | 6.874400e-50 | -8.615850e-47 |
| Msa0032450 | Msa0580540 | 0.847696 | 9.821665e-60 | -8.615850e-47 |
| Msa0039920 | Msa0580540 | 0.877135 | 8.008416e-69 | -8.615850e-47 |
| Msa0040090 | Msa0580540 | 0.871675 | 5.702847e-67 | -8.615850e-47 |
| Msa0041780 | Msa0580540 | 0.806707 | 7.216812e-50 | -8.615850e-47 |
| Msa0042790 | Msa0580540 | 0.801769 | 7.701398e-49 | -8.615850e-47 |
| Msa0047470 | Msa0580540 | 0.800249 | 1.574727e-48 | -8.615850e-47 |
| Msa0057740 | Msa0580540 | 0.828126 | 1.069186e-54 | -8.615850e-47 |
| Msa0064170 | Msa0580540 | 0.801831 | 7.477969e-49 | -8.615850e-47 |
| Msa0064180 | Msa0580540 | 0.807533 | 4.825605e-50 | -8.615850e-47 |
| Msa0072830 | Msa0580540 | 0.819946 | 8.892283e-53 | -8.615850e-47 |
| Msa0072860 | Msa0580540 | 0.819247 | 1.283817e-52 | -8.615850e-47 |
| Msa0085580 | Msa0580540 | 0.809492 | 1.842600e-50 | -8.615850e-47 |
| Msa0087580 | Msa0580540 | 0.877301 | 7.012224e-69 | -8.615850e-47 |
| Msa0087780 | Msa0580540 | 0.861050 | 1.346444e-63 | -8.615850e-47 |
| Msa0087790 | Msa0580540 | 0.835054 | 2.098229e-56 | -8.615850e-47 |
| Msa0096020 | Msa0580540 | 0.969071 | 1.380668e-129 | -8.615850e-47 |
| Msa0096510 | Msa0580540 | 0.826916 | 2.086116e-54 | -8.615850e-47 |
| Msa0103060 | Msa0580540 | 0.826055 | 3.346796e-54 | -8.615850e-47 |
| Msa0104390 | Msa0580540 | 0.813950 | 1.974668e-51 | -8.615850e-47 |
| Msa0117300 | Msa0580540 | 0.809042 | 2.300137e-50 | -8.615850e-47 |
| Msa0131090 | Msa0580540 | 0.815431 | 9.279929e-52 | -8.615850e-47 |
| Msa0134300 | Msa0580540 | 0.877805 | 4.680675e-69 | -8.615850e-47 |
| Msa0134380 | Msa0580540 | 0.867485 | 1.321687e-65 | -8.615850e-47 |
| Msa0134390 | Msa0580540 | 0.840734 | 7.272819e-58 | -8.615850e-47 |
| Msa0134400 | Msa0580540 | 0.849391 | 3.331926e-60 | -8.615850e-47 |
| Msa0134410 | Msa0580540 | 0.815943 | 7.132817e-52 | -8.615850e-47 |
| Msa0134420 | Msa0580540 | 0.840413 | 8.827664e-58 | -8.615850e-47 |
| Msa0147800 | Msa0580540 | 0.802916 | 4.471125e-49 | -8.615850e-47 |
| Msa0148430 | Msa0580540 | 0.813559 | 2.407957e-51 | -8.615850e-47 |
| Msa0153640 | Msa0580540 | 0.801685 | 8.011682e-49 | -8.615850e-47 |
| Msa0154240 | Msa0580540 | 0.802654 | 5.062574e-49 | -8.615850e-47 |
| Msa0175720 | Msa0580540 | 0.834927 | 2.258106e-56 | -8.615850e-47 |
| Msa0180590 | Msa0580540 | 0.821255 | 4.448657e-53 | -8.615850e-47 |
| Msa0180600 | Msa0580540 | 0.874338 | 7.301074e-68 | -8.615850e-47 |
| Msa0180780 | Msa0580540 | 0.871171 | 8.375779e-67 | -8.615850e-47 |
| Msa0186510 | Msa0580540 | 0.829999 | 3.758372e-55 | -8.615850e-47 |
| Msa0187980 | Msa0580540 | 0.821599 | 3.705364e-53 | -8.615850e-47 |
| Msa0188500 | Msa0580540 | 0.842348 | 2.732496e-58 | -8.615850e-47 |
| Msa0197730 | Msa0580540 | 0.860670 | 1.756840e-63 | -8.615850e-47 |
| Msa0200840 | Msa0580540 | 0.827507 | 1.505693e-54 | -8.615850e-47 |
| Msa0200870 | Msa0580540 | 0.805849 | 1.094284e-49 | -8.615850e-47 |
| Msa0210880 | Msa0580540 | 0.831134 | 1.982999e-55 | -8.615850e-47 |
| Msa0212730 | Msa0580540 | 0.807530 | 4.832391e-50 | -8.615850e-47 |
| Msa0218430 | Msa0580540 | 0.824248 | 8.946653e-54 | -8.615850e-47 |
| Msa0223190 | Msa0580540 | 0.817747 | 2.809453e-52 | -8.615850e-47 |
| Msa0224400 | Msa0580540 | 0.819197 | 1.318071e-52 | -8.615850e-47 |
| Msa0225880 | Msa0580540 | 0.825044 | 5.809032e-54 | -8.615850e-47 |
| Msa0230980 | Msa0580540 | 0.859162 | 5.003782e-63 | -8.615850e-47 |
| Msa0231590 | Msa0580540 | 0.804536 | 2.060652e-49 | -8.615850e-47 |
| Msa0372990 | Msa0580540 | 0.808959 | 2.396861e-50 | -8.615850e-47 |
| Msa0378670 | Msa0580540 | 0.853965 | 1.685340e-61 | -8.615850e-47 |
| Msa0378700 | Msa0580540 | 0.860369 | 2.166720e-63 | -8.615850e-47 |
| Msa0379540 | Msa0580540 | 0.839771 | 1.298037e-57 | -8.615850e-47 |
| Msa0385770 | Msa0580540 | 0.815287 | 9.986229e-52 | -8.615850e-47 |
| Msa0388200 | Msa0580540 | 0.807457 | 5.008032e-50 | -8.615850e-47 |
| Msa0393140 | Msa0580540 | 0.809499 | 1.835526e-50 | -8.615850e-47 |
| Msa0403720 | Msa0580540 | 0.807171 | 5.757990e-50 | -8.615850e-47 |
| Msa0404180 | Msa0580540 | 0.813806 | 2.124481e-51 | -8.615850e-47 |
| Msa0404220 | Msa0580540 | 0.822365 | 2.462508e-53 | -8.615850e-47 |
| Msa0419040 | Msa0580540 | 0.818474 | 1.923899e-52 | -8.615850e-47 |
| Msa0421390 | Msa0580540 | 0.813756 | 2.179020e-51 | -8.615850e-47 |
| Msa0428310 | Msa0580540 | 0.819959 | 8.829370e-53 | -8.615850e-47 |
| Msa0428330 | Msa0580540 | 0.848065 | 7.770463e-60 | -8.615850e-47 |
| Msa0431940 | Msa0580540 | 0.838080 | 3.555499e-57 | -8.615850e-47 |
| Msa0434090 | Msa0580540 | -0.818115 | 2.320145e-52 | -8.615850e-47 |
| Msa0456480 | Msa0580540 | 0.864856 | 8.997968e-65 | -8.615850e-47 |
| Msa0465640 | Msa0580540 | 0.825050 | 5.790853e-54 | -8.615850e-47 |
| Msa0475400 | Msa0580540 | 0.827246 | 1.738981e-54 | -8.615850e-47 |
| Msa0477900 | Msa0580540 | -0.827144 | 1.839633e-54 | -8.615850e-47 |
| Msa0481050 | Msa0580540 | 0.822154 | 2.757374e-53 | -8.615850e-47 |
| Msa0239610 | Msa0580540 | 0.817895 | 2.600846e-52 | -8.615850e-47 |
| Msa0246300 | Msa0580540 | 0.800744 | 1.248132e-48 | -8.615850e-47 |
| Msa0251150 | Msa0580540 | 0.807374 | 5.215787e-50 | -8.615850e-47 |
| Msa0253160 | Msa0580540 | 0.804238 | 2.377796e-49 | -8.615850e-47 |
| Msa0256430 | Msa0580540 | 0.811254 | 7.674092e-51 | -8.615850e-47 |
| Msa0260470 | Msa0580540 | 0.832882 | 7.335204e-56 | -8.615850e-47 |
| Msa0264420 | Msa0580540 | 0.815389 | 9.477859e-52 | -8.615850e-47 |
| Msa0270460 | Msa0580540 | 0.868168 | 7.977002e-66 | -8.615850e-47 |
| Msa0274950 | Msa0580540 | -0.830247 | 3.269506e-55 | -8.615850e-47 |
| Msa0281940 | Msa0580540 | 0.812668 | 3.775405e-51 | -8.615850e-47 |
| Msa0291940 | Msa0580540 | 0.801333 | 9.463124e-49 | -8.615850e-47 |
| Msa0302310 | Msa0580540 | 0.803028 | 4.237568e-49 | -8.615850e-47 |
| Msa0303500 | Msa0580540 | 0.801698 | 7.964254e-49 | -8.615850e-47 |
| Msa0304110 | Msa0580540 | 0.831378 | 1.727387e-55 | -8.615850e-47 |
| Msa0309060 | Msa0580540 | 0.842848 | 2.012684e-58 | -8.615850e-47 |
| Msa0317360 | Msa0580540 | 0.843481 | 1.364988e-58 | -8.615850e-47 |
| Msa0339670 | Msa0580540 | 0.812713 | 3.690772e-51 | -8.615850e-47 |
| Msa0341190 | Msa0580540 | 0.840007 | 1.126950e-57 | -8.615850e-47 |
| Msa0364010 | Msa0580540 | 0.807414 | 5.112968e-50 | -8.615850e-47 |
| Msa0500490 | Msa0580540 | 0.831054 | 2.074792e-55 | -8.615850e-47 |
| Msa0511600 | Msa0580540 | 0.841103 | 5.819581e-58 | -8.615850e-47 |
| Msa0518480 | Msa0580540 | 0.819702 | 1.010962e-52 | -8.615850e-47 |
| Msa0519060 | Msa0580540 | 0.813051 | 3.112759e-51 | -8.615850e-47 |
| Msa0520810 | Msa0580540 | 0.838436 | 2.879799e-57 | -8.615850e-47 |
| Msa0521570 | Msa0580540 | 0.808093 | 3.668112e-50 | -8.615850e-47 |
| Msa0521940 | Msa0580540 | -0.886295 | 3.874581e-72 | -8.615850e-47 |
| Msa0539270 | Msa0580540 | 0.806671 | 7.344206e-50 | -8.615850e-47 |
| Msa0545230 | Msa0580540 | 0.823639 | 1.242719e-53 | -8.615850e-47 |
| Msa0547200 | Msa0580540 | -0.820547 | 6.473703e-53 | -8.615850e-47 |
| Msa0549330 | Msa0580540 | 0.853295 | 2.626995e-61 | -8.615850e-47 |
| Msa0555960 | Msa0580540 | 0.845660 | 3.535681e-59 | -8.615850e-47 |
| Msa0556070 | Msa0580540 | 0.800447 | 1.435429e-48 | -8.615850e-47 |
| Msa0560370 | Msa0580540 | 0.813501 | 2.478699e-51 | -8.615850e-47 |
| Msa0579340 | Msa0580540 | 0.814685 | 1.358263e-51 | -8.615850e-47 |
| Msa0579360 | Msa0580540 | 0.808219 | 3.448304e-50 | -8.615850e-47 |
| Msa0580540 | Msa0587290 | 0.819766 | 9.774826e-53 | -8.615850e-47 |
| Msa0580540 | Msa0601920 | -0.814378 | 1.588702e-51 | -8.615850e-47 |
| Msa0580540 | Msa0604640 | 0.838174 | 3.364351e-57 | -8.615850e-47 |
| Msa0580540 | Msa0610360 | 0.855667 | 5.409337e-62 | -8.615850e-47 |
| Msa0580540 | Msa0614980 | 0.851787 | 7.069206e-61 | -8.615850e-47 |
| Msa0580540 | Msa0615850 | 0.820783 | 5.715077e-53 | -8.615850e-47 |
| Msa0580540 | Msa0617120 | 0.812149 | 4.901200e-51 | -8.615850e-47 |
| Msa0580540 | Msa0621780 | 0.987454 | 2.567198e-170 | -8.615850e-47 |
| Msa0580540 | Msa0622250 | 0.803488 | 3.403396e-49 | -8.615850e-47 |
| Msa0580540 | Msa0629440 | -0.808853 | 2.525298e-50 | -8.615850e-47 |
| Msa0580540 | Msa0630850 | 0.802562 | 5.288938e-49 | -8.615850e-47 |
| Msa0580540 | Msa0638040 | 0.800887 | 1.166970e-48 | -8.615850e-47 |
| Msa0580540 | Msa0639030 | 0.818043 | 2.408394e-52 | -8.615850e-47 |
| Msa0580540 | Msa0643020 | -0.842092 | 3.193579e-58 | -8.615850e-47 |
| Msa0580540 | Msa0644770 | -0.801280 | 9.702142e-49 | -8.615850e-47 |
| Msa0580540 | Msa0650640 | 0.813399 | 2.611010e-51 | -8.615850e-47 |
| Msa0580540 | Msa0650650 | 0.815020 | 1.145021e-51 | -8.615850e-47 |
| Msa0580540 | Msa0650740 | 0.809706 | 1.657018e-50 | -8.615850e-47 |
| Msa0580540 | Msa0650890 | 0.858566 | 7.543219e-63 | -8.615850e-47 |
| Msa0580540 | Msa0651310 | 0.809199 | 2.129006e-50 | -8.615850e-47 |
| Msa0580540 | Msa0665150 | 0.824519 | 7.724803e-54 | -8.615850e-47 |
| Msa0580540 | Msa0665790 | 0.801077 | 1.067211e-48 | -8.615850e-47 |
| Msa0580540 | Msa0679780 | 0.825640 | 4.198972e-54 | -8.615850e-47 |
| Msa0580540 | Msa0681210 | 0.811991 | 5.306493e-51 | -8.615850e-47 |
| Msa0580540 | Msa0682730 | -0.824121 | 9.584648e-54 | -8.615850e-47 |
| Msa0580540 | Msa0693400 | 0.826024 | 3.402824e-54 | -8.615850e-47 |
| Msa0580540 | Msa0697600 | 0.838746 | 2.394953e-57 | -8.615850e-47 |
| Msa0580540 | Msa0698900 | 0.830290 | 3.191289e-55 | -8.615850e-47 |
| Msa0580540 | Msa0700490 | -0.802831 | 4.655755e-49 | -8.615850e-47 |
| Msa0580540 | Msa0704780 | 0.849049 | 4.148906e-60 | -8.615850e-47 |
| Msa0580540 | Msa0705050 | 0.837836 | 4.109087e-57 | -8.615850e-47 |
| Msa0580540 | Msa0705810 | 0.816075 | 6.665385e-52 | -8.615850e-47 |
| Msa0580540 | Msa0712670 | 0.801684 | 8.016407e-49 | -8.615850e-47 |
| Msa0580540 | Msa0713210 | 0.863164 | 3.026399e-64 | -8.615850e-47 |
| Msa0580540 | Msa0713220 | 0.853328 | 2.570025e-61 | -8.615850e-47 |
| Msa0580540 | Msa0713230 | 0.822499 | 2.292532e-53 | -8.615850e-47 |
| Msa0580540 | Msa0715510 | -0.848476 | 5.983174e-60 | -8.615850e-47 |
| Msa0580540 | Msa0718920 | 0.807635 | 4.590940e-50 | -8.615850e-47 |
| Msa0580540 | Msa0734760 | 0.819110 | 1.379090e-52 | -8.615850e-47 |
| Msa0580540 | Msa0739610 | 0.831480 | 1.630095e-55 | -8.615850e-47 |
| Msa0580540 | Msa0748330 | 0.800782 | 1.226283e-48 | -8.615850e-47 |
| Msa0580540 | Msa0748980 | 0.824143 | 9.467843e-54 | -8.615850e-47 |
| Msa0580540 | Msa0754350 | 0.975226 | 1.446425e-139 | -8.615850e-47 |
| Msa0580540 | Msa0755090 | 0.840631 | 7.742440e-58 | -8.615850e-47 |
| Msa0580540 | Msa0756440 | 0.821531 | 3.841926e-53 | -8.615850e-47 |
| Msa0580540 | Msa0763350 | 0.820606 | 6.277266e-53 | -8.615850e-47 |
| Msa0580540 | Msa0773260 | 0.810606 | 1.060309e-50 | -8.615850e-47 |
| Msa0580540 | Msa0773290 | 0.819514 | 1.115809e-52 | -8.615850e-47 |
| Msa0580540 | Msa0776290 | 0.805714 | 1.168281e-49 | -8.615850e-47 |
| Msa0580540 | Msa0776590 | 0.819136 | 1.360519e-52 | -8.615850e-47 |
| Msa0580540 | Msa0782030 | 0.825437 | 4.689294e-54 | -8.615850e-47 |
| Msa0580540 | Msa0786100 | 0.804929 | 1.706283e-49 | -8.615850e-47 |
| Msa0580540 | Msa0790640 | 0.809891 | 1.512174e-50 | -8.615850e-47 |
| Msa0580540 | Msa0793060 | 0.825586 | 4.323236e-54 | -8.615850e-47 |
| Msa0580540 | Msa0793100 | 0.810196 | 1.299577e-50 | -8.615850e-47 |
| Msa0580540 | Msa0795710 | 0.987391 | 4.329927e-170 | -8.615850e-47 |
| Msa0580540 | Msa0796610 | 0.816440 | 5.523705e-52 | -8.615850e-47 |
| Msa0580540 | Msa0797000 | 0.832880 | 7.344984e-56 | -8.615850e-47 |
| Msa0580540 | Msa0813630 | 0.838025 | 3.673686e-57 | -8.615850e-47 |
| Msa0580540 | Msa0822370 | 0.848107 | 7.565197e-60 | -8.615850e-47 |
| Msa0580540 | Msa0825520 | 0.819039 | 1.431451e-52 | -8.615850e-47 |
| Msa0580540 | Msa0833450 | 0.962451 | 6.809526e-121 | -8.615850e-47 |
| Msa0580540 | Msa0833910 | 0.811094 | 8.315369e-51 | -8.615850e-47 |
| Msa0580540 | Msa0834160 | 0.814334 | 1.624742e-51 | -8.615850e-47 |
| Msa0580540 | Msa0834460 | 0.824457 | 7.988758e-54 | -8.615850e-47 |
| Msa0580540 | Msa0835550 | 0.834151 | 3.538343e-56 | -8.615850e-47 |
| Msa0580540 | Msa0844790 | 0.810112 | 1.355514e-50 | -8.615850e-47 |
| Msa0580540 | Msa0861480 | 0.811411 | 7.097693e-51 | -8.615850e-47 |
| Msa0580540 | Msa0861560 | 0.828576 | 8.328114e-55 | -8.615850e-47 |
| Msa0580540 | Msa0861800 | 0.830360 | 3.068320e-55 | -8.615850e-47 |
| Msa0580540 | Msa0864730 | 0.821354 | 4.222431e-53 | -8.615850e-47 |
| Msa0580540 | Msa0864750 | 0.819636 | 1.046392e-52 | -8.615850e-47 |
| Msa0580540 | Msa0879650 | 0.816651 | 4.954211e-52 | -8.615850e-47 |
| Msa0580540 | Msa0884840 | 0.803672 | 3.118090e-49 | -8.615850e-47 |
| Msa0580540 | Msa0887070 | 0.837912 | 3.928452e-57 | -8.615850e-47 |
| Msa0580540 | Msa0899730 | 0.840885 | 6.641027e-58 | -8.615850e-47 |
| Msa0580540 | Msa0912110 | 0.819577 | 1.079400e-52 | -8.615850e-47 |
| Msa0580540 | Msa0913120 | 0.849631 | 2.856844e-60 | -8.615850e-47 |
| Msa0580540 | Msa0930950 | 0.840550 | 8.127902e-58 | -8.615850e-47 |
| Msa0580540 | Msa0950410 | 0.882718 | 8.234711e-71 | -8.615850e-47 |
| Msa0580540 | Msa0964650 | 0.820365 | 7.129222e-53 | -8.615850e-47 |
| Msa0580540 | Msa0964680 | 0.804089 | 2.553195e-49 | -8.615850e-47 |
| Msa0580540 | Msa0973890 | 0.805413 | 1.350800e-49 | -8.615850e-47 |
| Msa0580540 | Msa0975550 | 0.800240 | 1.581172e-48 | -8.615850e-47 |
| Msa0580540 | Msa0975560 | 0.815068 | 1.117382e-51 | -8.615850e-47 |
| Msa0580540 | Msa0982590 | 0.823846 | 1.111754e-53 | -8.615850e-47 |
| Msa0580540 | Msa0986560 | 0.807413 | 5.115994e-50 | -8.615850e-47 |
| Msa0580540 | Msa0986620 | 0.833894 | 4.102007e-56 | -8.615850e-47 |
| Msa0580540 | Msa0999480 | 0.828318 | 9.608184e-55 | -8.615850e-47 |
| Msa0580540 | Msa0999590 | 0.840261 | 9.671332e-58 | -8.615850e-47 |
| Msa0580540 | Msa1010470 | 0.829543 | 4.854197e-55 | -8.615850e-47 |
| Msa0580540 | Msa1016110 | 0.810023 | 1.416131e-50 | -8.615850e-47 |
| Msa0580540 | Msa1019220 | -0.804894 | 1.734805e-49 | -8.615850e-47 |
| Msa0580540 | Msa1031530 | 0.802551 | 5.317470e-49 | -8.615850e-47 |
| Msa0580540 | Msa1036020 | -0.842673 | 2.240368e-58 | -8.615850e-47 |
| Msa0580540 | Msa1036250 | 0.804358 | 2.244923e-49 | -8.615850e-47 |
| Msa0580540 | Msa1040730 | -0.829866 | 4.050887e-55 | -8.615850e-47 |
| Msa0580540 | Msa1043020 | 0.824238 | 8.995702e-54 | -8.615850e-47 |
| Msa0580540 | Msa1044330 | 0.808961 | 2.393892e-50 | -8.615850e-47 |
| Msa0580540 | Msa1052030 | 0.827984 | 1.156657e-54 | -8.615850e-47 |
| Msa0580540 | Msa1053690 | 0.818401 | 1.998841e-52 | -8.615850e-47 |
| Msa0580540 | Msa1057620 | 0.801989 | 6.940324e-49 | -8.615850e-47 |
| Msa0580540 | Msa1061760 | -0.802294 | 6.007054e-49 | -8.615850e-47 |
| Msa0580540 | Msa1067910 | 0.820769 | 5.757162e-53 | -8.615850e-47 |
| Msa0580540 | Msa1069440 | 0.806018 | 1.008349e-49 | -8.615850e-47 |
| Msa0580540 | Msa1071310 | 0.807346 | 5.286636e-50 | -8.615850e-47 |
| Msa0580540 | Msa1076280 | -0.822342 | 2.493882e-53 | -8.615850e-47 |
| Msa0580540 | Msa1076520 | 0.819274 | 1.265623e-52 | -8.615850e-47 |
| Msa0580540 | Msa1088740 | 0.809371 | 1.956092e-50 | -8.615850e-47 |
| Msa0580540 | Msa1096510 | 0.822299 | 2.551697e-53 | -8.615850e-47 |
| Msa0580540 | Msa1096520 | 0.818249 | 2.163669e-52 | -8.615850e-47 |
| Msa0580540 | Msa1096570 | 0.833733 | 4.499962e-56 | -8.615850e-47 |
| Msa0580540 | Msa1101300 | 0.812535 | 4.037841e-51 | -8.615850e-47 |
| Msa0580540 | Msa1101980 | 0.803259 | 3.796782e-49 | -8.615850e-47 |
| Msa0580540 | Msa1102200 | 0.826542 | 2.562181e-54 | -8.615850e-47 |
| Msa0580540 | Msa1122550 | -0.813380 | 2.636097e-51 | -8.615850e-47 |
| Msa0580540 | Msa1122720 | 0.810150 | 1.329845e-50 | -8.615850e-47 |
| Msa0580540 | Msa1133440 | 0.815726 | 7.976520e-52 | -8.615850e-47 |
| Msa0580540 | Msa1134770 | -0.816993 | 4.152282e-52 | -8.615850e-47 |
| Msa0580540 | Msa1138600 | 0.826443 | 2.705953e-54 | -8.615850e-47 |
| Msa0580540 | Msa1140480 | 0.807357 | 5.257781e-50 | -8.615850e-47 |
| Msa0580540 | Msa1150860 | -0.821297 | 4.350937e-53 | -8.615850e-47 |
| Msa0580540 | Msa1177620 | 0.808052 | 3.742366e-50 | -8.615850e-47 |
| Msa0580540 | Msa1182830 | 0.802411 | 5.681567e-49 | -8.615850e-47 |
| Msa0580540 | Msa1187810 | 0.813753 | 2.182309e-51 | -8.615850e-47 |
| Msa0580540 | Msa1188820 | 0.823468 | 1.362890e-53 | -8.615850e-47 |
| Msa0580540 | Msa1190350 | 0.802919 | 4.464492e-49 | -8.615850e-47 |
| Msa0580540 | Msa1203860 | 0.822848 | 1.901760e-53 | -8.615850e-47 |
| Msa0580540 | Msa1206830 | 0.801702 | 7.950011e-49 | -8.615850e-47 |
| Msa0580540 | Msa1209790 | 0.840968 | 6.317376e-58 | -8.615850e-47 |
| Msa0580540 | Msa1209800 | 0.838144 | 3.424358e-57 | -8.615850e-47 |
| Msa0580540 | Msa1211260 | 0.848137 | 7.421261e-60 | -8.615850e-47 |
| Msa0580540 | Msa1211300 | 0.848480 | 5.968539e-60 | -8.615850e-47 |
| Msa0580540 | Msa1211390 | 0.854319 | 1.332581e-61 | -8.615850e-47 |
| Msa0580540 | Msa1219060 | 0.805754 | 1.146107e-49 | -8.615850e-47 |
| Msa0580540 | Msa1219780 | -0.848302 | 6.683827e-60 | -8.615850e-47 |
| Msa0580540 | Msa1222030 | -0.800058 | 1.722480e-48 | -8.615850e-47 |
| Msa0580540 | Msa1236860 | 0.807993 | 3.853276e-50 | -8.615850e-47 |
| Msa0580540 | Msa1237260 | 0.821693 | 3.525362e-53 | -8.615850e-47 |
| Msa0580540 | Msa1242010 | 0.809510 | 1.826366e-50 | -8.615850e-47 |
| Msa0580540 | Msa1242990 | 0.867363 | 1.446333e-65 | -8.615850e-47 |
| Msa0580540 | Msa1243630 | 0.844896 | 5.689108e-59 | -8.615850e-47 |
| Msa0580540 | Msa1244220 | 0.844367 | 7.898447e-59 | -8.615850e-47 |
| Msa0580540 | Msa1248220 | 0.802013 | 6.861320e-49 | -8.615850e-47 |
| Msa0580540 | Msa1249410 | 0.804685 | 1.918974e-49 | -8.615850e-47 |
| Msa0580540 | Msa1258020 | -0.800453 | 1.431024e-48 | -8.615850e-47 |
| Msa0580540 | Msa1258100 | 0.802687 | 4.984709e-49 | -8.615850e-47 |
| Msa0580540 | Msa1266710 | -0.842487 | 2.508882e-58 | -8.615850e-47 |
| Msa0580540 | Msa1272950 | 0.809185 | 2.143612e-50 | -8.615850e-47 |
| Msa0580540 | Msa1278420 | 0.812639 | 3.832252e-51 | -8.615850e-47 |
| Msa0580540 | Msa1282210 | 0.843248 | 1.574808e-58 | -8.615850e-47 |
| Msa0580540 | Msa1283120 | 0.817777 | 2.765379e-52 | -8.615850e-47 |
| Msa0580540 | Msa1284390 | 0.828065 | 1.106015e-54 | -8.615850e-47 |
| Msa0580540 | Msa1288970 | 0.818078 | 2.364707e-52 | -8.615850e-47 |
| Msa0580540 | Msa1302010 | -0.802069 | 6.683607e-49 | -8.615850e-47 |
| Msa0580540 | Msa1306700 | 0.841774 | 3.874130e-58 | -8.615850e-47 |
| Msa0580540 | Msa1317240 | 0.812794 | 3.544473e-51 | -8.615850e-47 |
| Msa0580540 | Msa1317710 | 0.811328 | 7.395730e-51 | -8.615850e-47 |
| Msa0580540 | Msa1322420 | 0.804698 | 1.906508e-49 | -8.615850e-47 |
| Msa0580540 | Msa1323920 | 0.837179 | 6.054729e-57 | -8.615850e-47 |
| Msa0580540 | Msa1330910 | 0.809421 | 1.907988e-50 | -8.615850e-47 |
| Msa0580540 | Msa1340880 | 0.800999 | 1.107331e-48 | -8.615850e-47 |
| Msa0580540 | Msa1342400 | 0.843142 | 1.680769e-58 | -8.615850e-47 |
| Msa0580540 | Msa1348330 | -0.871006 | 9.495014e-67 | -8.615850e-47 |
| Msa0580540 | Msa1349640 | 0.807668 | 4.517720e-50 | -8.615850e-47 |
| Msa0580540 | Msa1349810 | 0.829578 | 4.760767e-55 | -8.615850e-47 |
| Msa0580540 | Msa1349850 | 0.846155 | 2.594447e-59 | -8.615850e-47 |
| Msa0580540 | Msa1356730 | 0.840407 | 8.857183e-58 | -8.615850e-47 |
| Msa0580540 | Msa1363690 | -0.834277 | 3.290127e-56 | -8.615850e-47 |
| Msa0580540 | Msa1364850 | 0.811107 | 8.258978e-51 | -8.615850e-47 |
| Msa0580540 | Msa1368660 | 0.831228 | 1.880448e-55 | -8.615850e-47 |
| Msa0580540 | Msa1369180 | 0.814313 | 1.642065e-51 | -8.615850e-47 |
| Msa0580540 | Msa1370930 | -0.839187 | 1.841476e-57 | -8.615850e-47 |
| Msa0580540 | Msa1373390 | 0.802680 | 5.001595e-49 | -8.615850e-47 |
| Msa0580540 | Msa1384620 | 0.822248 | 2.621658e-53 | -8.615850e-47 |
| Msa0580540 | Msa1384980 | 0.830235 | 3.292356e-55 | -8.615850e-47 |
| Msa0580540 | Msa1387520 | 0.807262 | 5.508972e-50 | -8.615850e-47 |
| Msa0580540 | Msa1388070 | 0.804368 | 2.233541e-49 | -8.615850e-47 |
| Msa0580540 | Msa1388520 | 0.814383 | 1.584507e-51 | -8.615850e-47 |
| Msa0580540 | Msa1395580 | 0.821363 | 4.202691e-53 | -8.615850e-47 |
| Msa0580540 | Msa1396550 | -0.836933 | 7.000165e-57 | -8.615850e-47 |
| Msa0580540 | Msa1403950 | 0.984794 | 1.312231e-161 | -8.615850e-47 |
| Msa0580540 | Msa1407210 | -0.848643 | 5.376795e-60 | -8.615850e-47 |
| Msa0580540 | Msa1409060 | -0.820376 | 7.087135e-53 | -8.615850e-47 |
| Msa0580540 | Msa1412620 | -0.802853 | 4.605813e-49 | -8.615850e-47 |
| Msa0580540 | Msa1413900 | 0.859443 | 4.120803e-63 | -8.615850e-47 |
| Msa0580540 | Msa1415270 | 0.808902 | 2.465012e-50 | -8.615850e-47 |
| Msa0580540 | Msa1417950 | -0.813988 | 1.936656e-51 | -8.615850e-47 |
| Msa0580540 | Msa1420600 | 0.802545 | 5.333415e-49 | -8.615850e-47 |
| Msa0580540 | Msa1425540 | 0.800412 | 1.459206e-48 | -8.615850e-47 |
| Msa0580540 | Msa1427180 | 0.818233 | 2.181331e-52 | -8.615850e-47 |
| Msa0580540 | Msa1431240 | 0.819509 | 1.119143e-52 | -8.615850e-47 |
| Msa0580540 | Msa1435690 | 0.821480 | 3.947712e-53 | -8.615850e-47 |
| Msa0580540 | Msa1443550 | 0.812564 | 3.978270e-51 | -8.615850e-47 |
| Msa0580540 | Msa1445780 | -0.816231 | 6.152328e-52 | -8.615850e-47 |
| Msa0580540 | Msa1446220 | 0.806958 | 6.387814e-50 | -8.615850e-47 |
| Msa0580540 | Msa1450630 | 0.801273 | 9.730991e-49 | -8.615850e-47 |
| Msa0580540 | Msa1451690 | 0.853440 | 2.386651e-61 | -8.615850e-47 |
| Msa0580540 | Msa1452200 | 0.856049 | 4.182786e-62 | -8.615850e-47 |
| Msa0580540 | Msa1459630 | 0.802442 | 5.599190e-49 | -8.615850e-47 |
| Msa0580540 | Msa1463500 | 0.801367 | 9.309530e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580540 | MtrunA17_Chr5g0398681 | 97.260 | 438 | 12 | 0 | 1 | 438 | 37 | 474 | 0.0 | 900 |
| Msa0580540 | MtrunA17_Chr5g0398691 | 97.959 | 49 | 1 | 0 | 451 | 499 | 1 | 49 | 2.23e-26 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580540 | AT1G12370.2 | 73.805 | 481 | 118 | 4 | 13 | 486 | 6 | 485 | 0.0 | 760 |
| Msa0580540 | AT1G12370.1 | 72.557 | 481 | 118 | 5 | 13 | 486 | 6 | 479 | 0.0 | 740 |
| Msa0580540 | AT1G12370.3 | 68.191 | 481 | 115 | 5 | 13 | 486 | 6 | 455 | 0.0 | 685 |
Find 136 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTCTTCACTTCTCTTAA+AGG | 0.077903 | 4_1:+85697662 | None:intergenic |
| CTCACAATGTTGTGCCTCTT+TGG | 0.134190 | 4_1:-85697583 | Msa0580540:CDS |
| TTATCTCCCTATTTGCATTT+TGG | 0.174359 | 4_1:-85697031 | Msa0580540:CDS |
| TGTAAACCAACTGCACTTTC+TGG | 0.198914 | 4_1:-85697055 | Msa0580540:CDS |
| AAAATGGATTCTTGACTAAA+AGG | 0.235044 | 4_1:-85697111 | Msa0580540:CDS |
| ATCAACGGTTGAAAGATAAT+TGG | 0.241349 | 4_1:-85698390 | Msa0580540:CDS |
| GGTGCAAAGGCGCGTCATTT+AGG | 0.258100 | 4_1:-85698286 | Msa0580540:CDS |
| ATATACCCGAACTAAGAAAA+AGG | 0.271526 | 4_1:+85698204 | None:intergenic |
| TATCTGTCCAAAATGCAAAT+AGG | 0.281173 | 4_1:+85697024 | None:intergenic |
| GTGCAAAGGCGCGTCATTTA+GGG | 0.286664 | 4_1:-85698285 | Msa0580540:CDS |
| TCATTTAGGGTTTATGCTTA+AGG | 0.317150 | 4_1:-85698272 | Msa0580540:CDS |
| AGTATAGTGCTAGAACAATA+AGG | 0.328544 | 4_1:-85697541 | Msa0580540:CDS |
| TTTCTTGTACAGAATGTATT+GGG | 0.328825 | 4_1:-85696220 | Msa0580540:intron |
| TCACAATGTTGTGCCTCTTT+GGG | 0.330219 | 4_1:-85697582 | Msa0580540:CDS |
| TTGTGAGAGGGTTAGTGATT+TGG | 0.348183 | 4_1:-85697627 | Msa0580540:CDS |
| ATGATATTTGAAGTAGGAAT+AGG | 0.350851 | 4_1:-85695357 | Msa0580540:three_prime_UTR |
| GGGTTCACCGACGGCGAAAT+TGG | 0.356744 | 4_1:+85698481 | None:intergenic |
| CCTGGTAATTTGCCATTGTT+TGG | 0.366651 | 4_1:-85695267 | Msa0580540:three_prime_UTR |
| CATTTAGGGTTTATGCTTAA+GGG | 0.367715 | 4_1:-85698271 | Msa0580540:CDS |
| CAATTGGAGATGGTTCACTA+TGG | 0.369299 | 4_1:-85696439 | Msa0580540:CDS |
| ATCTGTCCAAAATGCAAATA+GGG | 0.371421 | 4_1:+85697025 | None:intergenic |
| AAAGGCTGTAGATACTTTCT+TGG | 0.380747 | 4_1:-85696844 | Msa0580540:intron |
| GCTTTGGAATGCTTCTCAAT+TGG | 0.384572 | 4_1:-85696455 | Msa0580540:CDS |
| GCAGTTGGTGGTTCGACATC+AGG | 0.385393 | 4_1:+85697476 | None:intergenic |
| AGAATGTGGAGCTTCACTTT+TGG | 0.385826 | 4_1:-85697699 | Msa0580540:CDS |
| TTGGGTTGCTTCTGAGAAGT+TGG | 0.386676 | 4_1:-85697564 | Msa0580540:CDS |
| CGAACCACCAACTGCGAAAT+GGG | 0.396211 | 4_1:-85697468 | Msa0580540:CDS |
| CGGACCTTGAAAGAAGGTTC+TGG | 0.405636 | 4_1:-85698448 | Msa0580540:CDS |
| CCTGGTAATTTGCCATTGTC+TGG | 0.410925 | 4_1:-85695383 | Msa0580540:three_prime_UTR |
| ATGATACTTGAAGTAGGAAT+AGG | 0.414164 | 4_1:-85695241 | Msa0580540:three_prime_UTR |
| CGGTGAACCCTGGTCGCATT+CGG | 0.415152 | 4_1:-85698468 | Msa0580540:CDS |
| AAACGGGTCCCGTCGTGTAC+TGG | 0.419132 | 4_1:-85698423 | Msa0580540:CDS |
| GGCTCACACCAATCCACTTC+AGG | 0.422837 | 4_1:+85697172 | None:intergenic |
| CATATCTCAAGTGCTTCTTC+AGG | 0.423566 | 4_1:+85696168 | None:intergenic |
| ATATCATTGCTCAAGTGTTA+AGG | 0.423610 | 4_1:-85697412 | Msa0580540:intron |
| GGAAAATTTGCTATCTGAAA+AGG | 0.425354 | 4_1:-85695489 | Msa0580540:CDS |
| GTATAGTGCTAGAACAATAA+GGG | 0.425923 | 4_1:-85697540 | Msa0580540:CDS |
| TCCATTGCAGCAATTTCTCC+AGG | 0.429563 | 4_1:+85697151 | None:intergenic |
| TCGAACCACCAACTGCGAAA+TGG | 0.431415 | 4_1:-85697469 | Msa0580540:CDS |
| AACAACGGCAACAGGAACTT+TGG | 0.432053 | 4_1:+85698333 | None:intergenic |
| GAAAGTGCAGTTGGTTTACA+AGG | 0.434713 | 4_1:+85697058 | None:intergenic |
| GGCGAAATTGGCGGCGGCGA+CGG | 0.439771 | 4_1:+85698493 | None:intergenic |
| TTCTTACAGAAGGGAGCAGT+TGG | 0.440949 | 4_1:-85696617 | Msa0580540:intron |
| TGCTGCAATGGAAGTGTTGA+TGG | 0.442384 | 4_1:-85697140 | Msa0580540:CDS |
| TCTTGGAGGAGTTGATTGTT+CGG | 0.444155 | 4_1:-85696827 | Msa0580540:CDS |
| GTTGCACACCTTGCAGTTCA+AGG | 0.450618 | 4_1:-85695190 | Msa0580540:three_prime_UTR |
| ATCAGAGGCGTGGTCGAGTA+AGG | 0.459791 | 4_1:+85696725 | None:intergenic |
| TCAACGGTTGAAAGATAATT+GGG | 0.460189 | 4_1:-85698389 | Msa0580540:CDS |
| ATAAAATAGTTGGTGAGCTC+AGG | 0.462164 | 4_1:-85695523 | Msa0580540:CDS |
| TATATGTGGGGTACATGATC+AGG | 0.462446 | 4_1:-85695967 | Msa0580540:intron |
| GAAGTAGGAATAGGTTTATG+TGG | 0.462493 | 4_1:-85695348 | Msa0580540:three_prime_UTR |
| GAATAGGTTTATGTGGATTG+TGG | 0.462929 | 4_1:-85695341 | Msa0580540:three_prime_UTR |
| ATTCGATACATGAATTATGA+AGG | 0.471243 | 4_1:-85695590 | Msa0580540:CDS |
| CACCTGACTGCAGTATGAAA+TGG | 0.471472 | 4_1:-85696030 | Msa0580540:intron |
| CTGAGGACCATGTCATAGAC+TGG | 0.473064 | 4_1:-85697439 | Msa0580540:CDS |
| CCTCATTACGATTCATTACA+AGG | 0.477130 | 4_1:-85696771 | Msa0580540:CDS |
| ATGTATATATTTAAATGATA+AGG | 0.477258 | 4_1:-85696148 | Msa0580540:intron |
| CGCATTCGGACCTTGAAAGA+AGG | 0.484903 | 4_1:-85698454 | Msa0580540:CDS |
| GAAGTGGATTGGTGTGAGCC+TGG | 0.486895 | 4_1:-85697169 | Msa0580540:CDS |
| GGCTGTAGATACTTTCTTGG+AGG | 0.488828 | 4_1:-85696841 | Msa0580540:CDS |
| TTTGTTTAGGTATAGTAGCC+TGG | 0.489309 | 4_1:-85695285 | Msa0580540:three_prime_UTR |
| GCATATGTAAATAAAATAGT+TGG | 0.491237 | 4_1:-85695533 | Msa0580540:CDS |
| TTCAAGGTCCGAATGCGACC+AGG | 0.496662 | 4_1:+85698460 | None:intergenic |
| GTACATGTTCTTCAATCCTC+AGG | 0.499954 | 4_1:+85695443 | None:intergenic |
| ATGACCCATTTCGCAGTTGG+TGG | 0.500881 | 4_1:+85697464 | None:intergenic |
| TTTGTTTAGGCATAATAGCC+TGG | 0.502839 | 4_1:-85695401 | Msa0580540:three_prime_UTR |
| TCGAAGTTTGTTAGAGAATG+TGG | 0.506846 | 4_1:-85697713 | Msa0580540:CDS |
| CCAAACAATGGCAAATTACC+AGG | 0.508214 | 4_1:+85695267 | None:intergenic |
| CCAGACAATGGCAAATTACC+AGG | 0.508214 | 4_1:+85695383 | None:intergenic |
| GCTACGAGCTTCATATCCTC+AGG | 0.510731 | 4_1:-85696969 | Msa0580540:intron |
| GAATGCTTCTCAATTGGAGA+TGG | 0.517008 | 4_1:-85696449 | Msa0580540:CDS |
| CTGAGGTTCCTGAAGTGGAT+TGG | 0.525623 | 4_1:-85697180 | Msa0580540:CDS |
| GTGATGACCCATTTCGCAGT+TGG | 0.526232 | 4_1:+85697461 | None:intergenic |
| CATTACAAGGAGCATGGGAG+TGG | 0.527272 | 4_1:-85696758 | Msa0580540:CDS |
| GGCTGCATGTGGTCTATATG+TGG | 0.531306 | 4_1:-85695981 | Msa0580540:CDS |
| ACGATTCATTACAAGGAGCA+TGG | 0.534155 | 4_1:-85696764 | Msa0580540:CDS |
| GACGGTGTGGTAGCCATGAT+CGG | 0.534775 | 4_1:+85698511 | None:intergenic |
| CGATTCATTACAAGGAGCAT+GGG | 0.538381 | 4_1:-85696763 | Msa0580540:CDS |
| GCCGCCGCCAATTTCGCCGT+CGG | 0.538485 | 4_1:-85698488 | Msa0580540:CDS |
| GCCTGGAGAAATTGCTGCAA+TGG | 0.546282 | 4_1:-85697152 | Msa0580540:CDS |
| GCTGAAGTTGGTGACACAAT+TGG | 0.547069 | 4_1:+85698242 | None:intergenic |
| TGGAGCTGAGGTTCCTGAAG+TGG | 0.548511 | 4_1:-85697185 | Msa0580540:CDS |
| CAGAAGGGAGCAGTTGGAGA+AGG | 0.554367 | 4_1:-85696611 | Msa0580540:CDS |
| TATATTATAGGGTGAGGCGG+AGG | 0.555525 | 4_1:-85697744 | Msa0580540:intron |
| ACAAGGGTTATTGCGATCTG+TGG | 0.555752 | 4_1:+85697075 | None:intergenic |
| CTAAATTAGGAGTGGAGCTG+AGG | 0.557965 | 4_1:-85697197 | Msa0580540:intron |
| AGGGATCCAAGTGGTTATAA+CGG | 0.559170 | 4_1:-85696002 | Msa0580540:CDS |
| AATTGGAGATGGTTCACTAT+GGG | 0.559765 | 4_1:-85696438 | Msa0580540:CDS |
| CAAATCTGAGATTTGTGAGA+GGG | 0.564185 | 4_1:-85697639 | Msa0580540:CDS |
| TTCACCGACGGCGAAATTGG+CGG | 0.565213 | 4_1:+85698484 | None:intergenic |
| TGAGACCAACTCTTTCGAGT+TGG | 0.565413 | 4_1:+85695146 | None:intergenic |
| GCAAATCTGAGATTTGTGAG+AGG | 0.567196 | 4_1:-85697640 | Msa0580540:CDS |
| TATGAAGAGAATGCTGAAGT+TGG | 0.570021 | 4_1:+85698230 | None:intergenic |
| TTCTCAGAAGCAACCCAAAG+AGG | 0.571605 | 4_1:+85697569 | None:intergenic |
| ATTTCGCCGTCGGTGAACCC+TGG | 0.573219 | 4_1:-85698478 | Msa0580540:CDS |
| CTGAACATCCAGTACACGAC+GGG | 0.574855 | 4_1:+85698415 | None:intergenic |
| AATTGGCGGCGGCGACGGTG+TGG | 0.579274 | 4_1:+85698498 | None:intergenic |
| GATAAACCAGAAAGTGCAGT+TGG | 0.580556 | 4_1:+85697049 | None:intergenic |
| GGGCAAAGAAGATACTTGAA+TGG | 0.580989 | 4_1:-85696200 | Msa0580540:CDS |
| TTCGATACATGAATTATGAA+GGG | 0.582152 | 4_1:-85695589 | Msa0580540:CDS |
| AAGATACTTGAATGGACAAG+AGG | 0.585996 | 4_1:-85696192 | Msa0580540:CDS |
| TGGCTGATGATACTTGAAGT+AGG | 0.588149 | 4_1:-85695247 | Msa0580540:three_prime_UTR |
| GCAGTATGAAATGGATGGGA+GGG | 0.599361 | 4_1:-85696021 | Msa0580540:intron |
| ACCGACGGCGAAATTGGCGG+CGG | 0.601194 | 4_1:+85698487 | None:intergenic |
| TCAAGGTCCGAATGCGACCA+GGG | 0.604948 | 4_1:+85698461 | None:intergenic |
| CCTTGTAATGAATCGTAATG+AGG | 0.611817 | 4_1:+85696771 | None:intergenic |
| GACTGCAGTATGAAATGGAT+GGG | 0.612359 | 4_1:-85696025 | Msa0580540:intron |
| AAATATCATCAGCCAGACAA+TGG | 0.615090 | 4_1:+85695371 | None:intergenic |
| GTTCACTATGGGAAAATGCA+CGG | 0.616114 | 4_1:-85696427 | Msa0580540:CDS |
| TATAGTGCTAGAACAATAAG+GGG | 0.617876 | 4_1:-85697539 | Msa0580540:CDS |
| ATGCAGCCGTTATAACCACT+TGG | 0.618854 | 4_1:+85695996 | None:intergenic |
| GTACTCCAACTCGAAAGAGT+TGG | 0.619582 | 4_1:-85695151 | Msa0580540:three_prime_UTR |
| ATTACAAGGAGCATGGGAGT+GGG | 0.625049 | 4_1:-85696757 | Msa0580540:CDS |
| GTGGTTATAACGGCTGCATG+TGG | 0.626227 | 4_1:-85695992 | Msa0580540:CDS |
| GCTGCATGTGGTCTATATGT+GGG | 0.627943 | 4_1:-85695980 | Msa0580540:CDS |
| AAGTATCATCAGCCAAACAA+TGG | 0.628100 | 4_1:+85695255 | None:intergenic |
| AGTTTCGTCCTTGAACTGCA+AGG | 0.628868 | 4_1:+85695182 | None:intergenic |
| AACATGTGGTCGCTTATCAG+AGG | 0.633768 | 4_1:+85696710 | None:intergenic |
| ATGCGACCAGGGTTCACCGA+CGG | 0.638577 | 4_1:+85698472 | None:intergenic |
| TGGCTGATGATATTTGAAGT+AGG | 0.638889 | 4_1:-85695363 | Msa0580540:three_prime_UTR |
| AAAGTGCAGTTGGTTTACAA+GGG | 0.645680 | 4_1:+85697059 | None:intergenic |
| GCTGCAATGGAAGTGTTGAT+GGG | 0.650703 | 4_1:-85697139 | Msa0580540:CDS |
| TGCAGTATGAAATGGATGGG+AGG | 0.651233 | 4_1:-85696022 | Msa0580540:intron |
| TGAGGACCATGTCATAGACT+GGG | 0.652891 | 4_1:-85697438 | Msa0580540:CDS |
| CTGCATGTGGTCTATATGTG+GGG | 0.661411 | 4_1:-85695979 | Msa0580540:CDS |
| TGACTGCAGTATGAAATGGA+TGG | 0.661718 | 4_1:-85696026 | Msa0580540:intron |
| ACTCCGCTGTTGTAATCCTG+AGG | 0.667646 | 4_1:-85695459 | Msa0580540:CDS |
| TATCATCCCAGTCTATGACA+TGG | 0.679585 | 4_1:+85697432 | None:intergenic |
| GTGGTCGCTTATCAGAGGCG+TGG | 0.687884 | 4_1:+85696715 | None:intergenic |
| AATCCTCAGGATTACAACAG+CGG | 0.707260 | 4_1:+85695456 | None:intergenic |
| ACTGGATGTTCAGAGATCAA+CGG | 0.717235 | 4_1:-85698405 | Msa0580540:CDS |
| TCTGAACATCCAGTACACGA+CGG | 0.720409 | 4_1:+85698414 | None:intergenic |
| TGCGAAATGGGTCATCACTG+AGG | 0.720581 | 4_1:-85697456 | Msa0580540:CDS |
| TGAGCTCAGGAAGAGAAAAG+CGG | 0.732170 | 4_1:-85695510 | Msa0580540:CDS |
| GTGACTCACGTGTAAACATG+TGG | 0.733331 | 4_1:+85696696 | None:intergenic |
| ATGGATGGGAGGGATCCAAG+TGG | 0.761782 | 4_1:-85696011 | Msa0580540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTTATATTATA+GGG | - | chr4_1:85695823-85695842 | Msa0580540:intron | 0.0% |
| !! | AAAATTCAAATTTCAATTAT+AGG | - | chr4_1:85695421-85695440 | Msa0580540:three_prime_UTR | 10.0% |
| !! | ATGTATATATTTAAATGATA+AGG | - | chr4_1:85697430-85697449 | Msa0580540:CDS | 10.0% |
| !!! | ATTTTTTTCTTTCCTAAATT+AGG | - | chr4_1:85696368-85696387 | Msa0580540:intron | 15.0% |
| !! | TTAGGAAAAACAAAATAAAA+CGG | + | chr4_1:85696658-85696677 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTATTCTTACAGA+AGG | - | chr4_1:85696951-85696970 | Msa0580540:intron | 15.0% |
| !!! | TTTTTTTTATTCTTACAGAA+GGG | - | chr4_1:85696952-85696971 | Msa0580540:intron | 15.0% |
| !! | ATCAAACAGATTAAAAACAA+CGG | + | chr4_1:85695263-85695282 | None:intergenic | 20.0% |
| !!! | TTATATTTGCGTATTTGTTA+TGG | - | chr4_1:85695728-85695747 | Msa0580540:intron | 20.0% |
| !!! | TATATTTGCGTATTTGTTAT+GGG | - | chr4_1:85695729-85695748 | Msa0580540:intron | 20.0% |
| !!! | TTTTTTTATATTATAGGGTG+AGG | - | chr4_1:85695828-85695847 | Msa0580540:intron | 20.0% |
| !! | TAAGAAATATTAGTGATTGA+AGG | + | chr4_1:85696255-85696274 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTTCCTAAGAAAA+CGG | - | chr4_1:85696663-85696682 | Msa0580540:intron | 20.0% |
| !! | TTTCTCATATTAAAACTACA+TGG | - | chr4_1:85697036-85697055 | Msa0580540:CDS | 20.0% |
| !!! | AAATGAAAGGCATTAATATA+GGG | + | chr4_1:85697085-85697104 | None:intergenic | 20.0% |
| !!! | AAAATGAAAGGCATTAATAT+AGG | + | chr4_1:85697086-85697105 | None:intergenic | 20.0% |
| !!! | TTAATGCCTTTCATTTTTTT+TGG | - | chr4_1:85697089-85697108 | Msa0580540:CDS | 20.0% |
| !!! | TAATGCCTTTCATTTTTTTT+GGG | - | chr4_1:85697090-85697109 | Msa0580540:CDS | 20.0% |
| !! | TAATAAACTTACGATTAGAA+TGG | + | chr4_1:85697224-85697243 | None:intergenic | 20.0% |
| !! | GTATAAAAAAATGAATGTTG+AGG | - | chr4_1:85697705-85697724 | Msa0580540:CDS | 20.0% |
| !! | ACCTAATGAATTGTAAAATT+TGG | - | chr4_1:85697838-85697857 | Msa0580540:intron | 20.0% |
| !!! | ACCAAATTTTACAATTCATT+AGG | + | chr4_1:85697842-85697861 | None:intergenic | 20.0% |
| !! | GCATATGTAAATAAAATAGT+TGG | - | chr4_1:85698045-85698064 | Msa0580540:intron | 20.0% |
| !! | AATCTGTTTGATCATTTTCT+TGG | - | chr4_1:85695271-85695290 | Msa0580540:three_prime_UTR | 25.0% |
| !! | ATATACCCTTTTTCTTAGTT+CGG | - | chr4_1:85695368-85695387 | Msa0580540:three_prime_UTR | 25.0% |
| !!! | ATATTTGCGTATTTGTTATG+GGG | - | chr4_1:85695730-85695749 | Msa0580540:intron | 25.0% |
| !! | AAAATGGATTCTTGACTAAA+AGG | - | chr4_1:85696467-85696486 | Msa0580540:intron | 25.0% |
| !!! | TATTTTGTTTTCTAGCTCTA+AGG | - | chr4_1:85696907-85696926 | Msa0580540:intron | 25.0% |
| !!! | AATGAAAGGCATTAATATAG+GGG | + | chr4_1:85697084-85697103 | None:intergenic | 25.0% |
| !!! | AATGCCTTTCATTTTTTTTG+GGG | - | chr4_1:85697091-85697110 | Msa0580540:CDS | 25.0% |
| ! | ATTCATCAAAACAGTTTACT+TGG | - | chr4_1:85697273-85697292 | Msa0580540:intron | 25.0% |
| ! | CATATAATCTCTTTCTCTAT+TGG | - | chr4_1:85697300-85697319 | Msa0580540:intron | 25.0% |
| !! | TTTTCTTGTACAGAATGTAT+TGG | - | chr4_1:85697357-85697376 | Msa0580540:intron | 25.0% |
| ! | TTTCTTGTACAGAATGTATT+GGG | - | chr4_1:85697358-85697377 | Msa0580540:intron | 25.0% |
| !!! | ACAGTTTAATTTGAATGTTG+AGG | - | chr4_1:85697661-85697680 | Msa0580540:CDS | 25.0% |
| !!! | CATTTTTTTATACATCCAAC+AGG | + | chr4_1:85697698-85697717 | None:intergenic | 25.0% |
| !! | TAGGTTCTAATGAAATTAGA+AGG | + | chr4_1:85697823-85697842 | None:intergenic | 25.0% |
| !! | TTTGTGTTTCTATTCATTTC+AGG | - | chr4_1:85697936-85697955 | Msa0580540:intron | 25.0% |
| !! | TTGTGTTTCTATTCATTTCA+GGG | - | chr4_1:85697937-85697956 | Msa0580540:intron | 25.0% |
| !! | TATCGAATTTTCCCAAAAAT+GGG | + | chr4_1:85697976-85697995 | None:intergenic | 25.0% |
| ! | ATTCGATACATGAATTATGA+AGG | - | chr4_1:85697988-85698007 | Msa0580540:intron | 25.0% |
| ! | TTCGATACATGAATTATGAA+GGG | - | chr4_1:85697989-85698008 | Msa0580540:intron | 25.0% |
| !!! | TCTAGACATCTTTTTTGTTT+AGG | - | chr4_1:85698164-85698183 | Msa0580540:intron | 25.0% |
| !! | ATGATATTTGAAGTAGGAAT+AGG | - | chr4_1:85698221-85698240 | Msa0580540:CDS | 25.0% |
| !!! | TGCACTAATCTTTTTTGTTT+AGG | - | chr4_1:85698280-85698299 | Msa0580540:CDS | 25.0% |
| ATCAACGGTTGAAAGATAAT+TGG | - | chr4_1:85695188-85695207 | Msa0580540:three_prime_UTR | 30.0% | |
| TCAACGGTTGAAAGATAATT+GGG | - | chr4_1:85695189-85695208 | Msa0580540:three_prime_UTR | 30.0% | |
| ! | TCATTTAGGGTTTATGCTTA+AGG | - | chr4_1:85695306-85695325 | Msa0580540:three_prime_UTR | 30.0% |
| ! | CATTTAGGGTTTATGCTTAA+GGG | - | chr4_1:85695307-85695326 | Msa0580540:three_prime_UTR | 30.0% |
| ! | TATACCCTTTTTCTTAGTTC+GGG | - | chr4_1:85695369-85695388 | Msa0580540:three_prime_UTR | 30.0% |
| TATACCCGAACTAAGAAAAA+GGG | + | chr4_1:85695376-85695395 | None:intergenic | 30.0% | |
| ATATACCCGAACTAAGAAAA+AGG | + | chr4_1:85695377-85695396 | None:intergenic | 30.0% | |
| AAATGTCGATATTGTTATGC+TGG | - | chr4_1:85695518-85695537 | Msa0580540:CDS | 30.0% | |
| !! | TATTTGCGTATTTGTTATGG+GGG | - | chr4_1:85695731-85695750 | Msa0580540:intron | 30.0% |
| ! | TTTTATATTATAGGGTGAGG+CGG | - | chr4_1:85695831-85695850 | Msa0580540:intron | 30.0% |
| CATTTCTTCACTTCTCTTAA+AGG | + | chr4_1:85695919-85695938 | None:intergenic | 30.0% | |
| AGTATAGTGCTAGAACAATA+AGG | - | chr4_1:85696037-85696056 | Msa0580540:intron | 30.0% | |
| GTATAGTGCTAGAACAATAA+GGG | - | chr4_1:85696038-85696057 | Msa0580540:intron | 30.0% | |
| TATAGTGCTAGAACAATAAG+GGG | - | chr4_1:85696039-85696058 | Msa0580540:intron | 30.0% | |
| ATATCATTGCTCAAGTGTTA+AGG | - | chr4_1:85696166-85696185 | Msa0580540:CDS | 30.0% | |
| TTTCTTTCCTAAATTAGGAG+TGG | - | chr4_1:85696373-85696392 | Msa0580540:intron | 30.0% | |
| ! | TTATCTCCCTATTTGCATTT+TGG | - | chr4_1:85696547-85696566 | Msa0580540:intron | 30.0% |
| ATCTGTCCAAAATGCAAATA+GGG | + | chr4_1:85696556-85696575 | None:intergenic | 30.0% | |
| TATCTGTCCAAAATGCAAAT+AGG | + | chr4_1:85696557-85696576 | None:intergenic | 30.0% | |
| ! | CTTTTTCTGTTCTTCAATGT+TGG | - | chr4_1:85696708-85696727 | Msa0580540:CDS | 30.0% |
| TTTGCCCCAAAAAAAATGAA+AGG | + | chr4_1:85697098-85697117 | None:intergenic | 30.0% | |
| !!! | AGTTATTGCCTCCTTTTTTT+TGG | - | chr4_1:85697198-85697217 | Msa0580540:intron | 30.0% |
| GATTAGAATGGCCAAAAAAA+AGG | + | chr4_1:85697212-85697231 | None:intergenic | 30.0% | |
| ! | TTCTCTACAATGTTGACTAA+TGG | + | chr4_1:85697466-85697485 | None:intergenic | 30.0% |
| !!! | TTTTTTGTGTGAAGTGCTTT+TGG | - | chr4_1:85697743-85697762 | Msa0580540:intron | 30.0% |
| CAAATCAGTTCCACATAAAA+TGG | + | chr4_1:85697794-85697813 | None:intergenic | 30.0% | |
| !! | ATTGTAAAATTTGGTGTTGC+AGG | - | chr4_1:85697847-85697866 | Msa0580540:intron | 30.0% |
| ! | CTTCAAGATTTCTGAGTTTT+TGG | - | chr4_1:85697911-85697930 | Msa0580540:intron | 30.0% |
| ! | TGTGTTTCTATTCATTTCAG+GGG | - | chr4_1:85697938-85697957 | Msa0580540:intron | 30.0% |
| ! | GTATCGAATTTTCCCAAAAA+TGG | + | chr4_1:85697977-85697996 | None:intergenic | 30.0% |
| !! | GGAAAATTTGCTATCTGAAA+AGG | - | chr4_1:85698089-85698108 | Msa0580540:intron | 30.0% |
| ATGATACTTGAAGTAGGAAT+AGG | - | chr4_1:85698337-85698356 | Msa0580540:CDS | 30.0% | |
| GTCTCATTGACATTAAAAAG+AGG | - | chr4_1:85698449-85698468 | Msa0580540:CDS | 30.0% | |
| ! | TTTTCCAGAACCTTCTTTCA+AGG | + | chr4_1:85695137-85695156 | None:intergenic | 35.0% |
| !! | GAAAGAAGGTTCTGGAAAAA+CGG | - | chr4_1:85695138-85695157 | Msa0580540:three_prime_UTR | 35.0% |
| !! | AAAGAAGGTTCTGGAAAAAC+GGG | - | chr4_1:85695139-85695158 | Msa0580540:three_prime_UTR | 35.0% |
| AGATTAAAAACAACGGCAAC+AGG | + | chr4_1:85695256-85695275 | None:intergenic | 35.0% | |
| !! | TGATCATTTTCTTGGTGCAA+AGG | - | chr4_1:85695279-85695298 | Msa0580540:three_prime_UTR | 35.0% |
| TATGAAGAGAATGCTGAAGT+TGG | + | chr4_1:85695351-85695370 | None:intergenic | 35.0% | |
| AGAGTAAATGAGAGACAAAG+TGG | + | chr4_1:85695589-85695608 | None:intergenic | 35.0% | |
| TTTGACAGTAAGTCATAACC+AGG | + | chr4_1:85695651-85695670 | None:intergenic | 35.0% | |
| CCTGACATCATTCATAACTA+GGG | - | chr4_1:85695705-85695724 | Msa0580540:intron | 35.0% | |
| !! | TCGAAGTTTGTTAGAGAATG+TGG | - | chr4_1:85695865-85695884 | Msa0580540:intron | 35.0% |
| ! | CAAATCTGAGATTTGTGAGA+GGG | - | chr4_1:85695939-85695958 | Msa0580540:intron | 35.0% |
| ! | GTGTTGATGGGAAGTAAAAA+TGG | - | chr4_1:85696451-85696470 | Msa0580540:CDS | 35.0% |
| ! | AAAGTGCAGTTGGTTTACAA+GGG | + | chr4_1:85696522-85696541 | None:intergenic | 35.0% |
| AGCATAGTAAAACAAACCTG+AGG | + | chr4_1:85696628-85696647 | None:intergenic | 35.0% | |
| ! | TAAGATCTCACCGTTTTCTT+AGG | + | chr4_1:85696676-85696695 | None:intergenic | 35.0% |
| AAAACGGTGAGATCTTATCT+TGG | - | chr4_1:85696679-85696698 | Msa0580540:intron | 35.0% | |
| GTTCTTCAATGTTGGTGTAA+AGG | - | chr4_1:85696716-85696735 | Msa0580540:CDS | 35.0% | |
| AAAGGCTGTAGATACTTTCT+TGG | - | chr4_1:85696734-85696753 | Msa0580540:CDS | 35.0% | |
| CCTTGTAATGAATCGTAATG+AGG | + | chr4_1:85696810-85696829 | None:intergenic | 35.0% | |
| CCTCATTACGATTCATTACA+AGG | - | chr4_1:85696807-85696826 | Msa0580540:CDS | 35.0% | |
| TCCTGTAAGCTAATCTTTCA+TGG | - | chr4_1:85697003-85697022 | Msa0580540:CDS | 35.0% | |
| !! | TCCATGAAAGATTAGCTTAC+AGG | + | chr4_1:85697007-85697026 | None:intergenic | 35.0% |
| AATTGGAGATGGTTCACTAT+GGG | - | chr4_1:85697140-85697159 | Msa0580540:CDS | 35.0% | |
| TAGAATGGCCAAAAAAAAGG+AGG | + | chr4_1:85697209-85697228 | None:intergenic | 35.0% | |
| AAGATACTTGAATGGACAAG+AGG | - | chr4_1:85697386-85697405 | Msa0580540:intron | 35.0% | |
| ! | ATGCAGTTTTCATGAGATGA+AGG | - | chr4_1:85697501-85697520 | Msa0580540:CDS | 35.0% |
| ! | TGTGGTAGTTCCATTTTATG+TGG | - | chr4_1:85697781-85697800 | Msa0580540:intron | 35.0% |
| !! | ATAAAATAGTTGGTGAGCTC+AGG | - | chr4_1:85698055-85698074 | Msa0580540:intron | 35.0% |
| TTTGTTTAGGCATAATAGCC+TGG | - | chr4_1:85698177-85698196 | Msa0580540:intron | 35.0% | |
| AAATATCATCAGCCAGACAA+TGG | + | chr4_1:85698210-85698229 | None:intergenic | 35.0% | |
| ! | TGGCTGATGATATTTGAAGT+AGG | - | chr4_1:85698215-85698234 | Msa0580540:CDS | 35.0% |
| GAAGTAGGAATAGGTTTATG+TGG | - | chr4_1:85698230-85698249 | Msa0580540:CDS | 35.0% | |
| ! | GAATAGGTTTATGTGGATTG+TGG | - | chr4_1:85698237-85698256 | Msa0580540:CDS | 35.0% |
| TTTGTTTAGGTATAGTAGCC+TGG | - | chr4_1:85698293-85698312 | Msa0580540:CDS | 35.0% | |
| AAGTATCATCAGCCAAACAA+TGG | + | chr4_1:85698326-85698345 | None:intergenic | 35.0% | |
| GCAACAAAAATCTCCGATCA+TGG | - | chr4_1:85695054-85695073 | Msa0580540:three_prime_UTR | 40.0% | |
| ACTGGATGTTCAGAGATCAA+CGG | - | chr4_1:85695173-85695192 | Msa0580540:three_prime_UTR | 40.0% | |
| ATATTGTTATGCTGGATGCG+AGG | - | chr4_1:85695526-85695545 | Msa0580540:CDS | 40.0% | |
| TATTGTTATGCTGGATGCGA+GGG | - | chr4_1:85695527-85695546 | Msa0580540:CDS | 40.0% | |
| CATCTTAAAGTCACACTCAG+TGG | + | chr4_1:85695559-85695578 | None:intergenic | 40.0% | |
| AAACATGACATAGAGTGACC+TGG | - | chr4_1:85695630-85695649 | Msa0580540:intron | 40.0% | |
| ATGAATGATGTCAGGCAACT+TGG | + | chr4_1:85695700-85695719 | None:intergenic | 40.0% | |
| GCCTGACATCATTCATAACT+AGG | - | chr4_1:85695704-85695723 | Msa0580540:intron | 40.0% | |
| CCCTAGTTATGAATGATGTC+AGG | + | chr4_1:85695708-85695727 | None:intergenic | 40.0% | |
| ATTAGCCCTGTGAAATTGTC+CGG | + | chr4_1:85695769-85695788 | None:intergenic | 40.0% | |
| GACAATTTCACAGGGCTAAT+TGG | - | chr4_1:85695769-85695788 | Msa0580540:intron | 40.0% | |
| ! | AGAATGTGGAGCTTCACTTT+TGG | - | chr4_1:85695879-85695898 | Msa0580540:intron | 40.0% |
| ! | GCAAATCTGAGATTTGTGAG+AGG | - | chr4_1:85695938-85695957 | Msa0580540:intron | 40.0% |
| ! | TTGTGAGAGGGTTAGTGATT+TGG | - | chr4_1:85695951-85695970 | Msa0580540:intron | 40.0% |
| TCACAATGTTGTGCCTCTTT+GGG | - | chr4_1:85695996-85696015 | Msa0580540:CDS | 40.0% | |
| TATCATCCCAGTCTATGACA+TGG | + | chr4_1:85696149-85696168 | None:intergenic | 40.0% | |
| !! | TTATGTAGCACCGACAGATA+TGG | - | chr4_1:85696226-85696245 | Msa0580540:intron | 40.0% |
| TTGAAGGCAACCATATCTGT+CGG | + | chr4_1:85696239-85696258 | None:intergenic | 40.0% | |
| ACTGACACTGACATTAGACA+CGG | + | chr4_1:85696304-85696323 | None:intergenic | 40.0% | |
| ! | GAAAGTGCAGTTGGTTTACA+AGG | + | chr4_1:85696523-85696542 | None:intergenic | 40.0% |
| TGTAAACCAACTGCACTTTC+TGG | - | chr4_1:85696523-85696542 | Msa0580540:intron | 40.0% | |
| ! | GATAAACCAGAAAGTGCAGT+TGG | + | chr4_1:85696532-85696551 | None:intergenic | 40.0% |
| ! | TCTTGGAGGAGTTGATTGTT+CGG | - | chr4_1:85696751-85696770 | Msa0580540:CDS | 40.0% |
| ACGATTCATTACAAGGAGCA+TGG | - | chr4_1:85696814-85696833 | Msa0580540:CDS | 40.0% | |
| ! | CGATTCATTACAAGGAGCAT+GGG | - | chr4_1:85696815-85696834 | Msa0580540:CDS | 40.0% |
| ! | TTTGGGGCAAATATCAGCTT+TGG | - | chr4_1:85697107-85697126 | Msa0580540:CDS | 40.0% |
| !! | GCTTTGGAATGCTTCTCAAT+TGG | - | chr4_1:85697123-85697142 | Msa0580540:CDS | 40.0% |
| GAATGCTTCTCAATTGGAGA+TGG | - | chr4_1:85697129-85697148 | Msa0580540:CDS | 40.0% | |
| CAATTGGAGATGGTTCACTA+TGG | - | chr4_1:85697139-85697158 | Msa0580540:CDS | 40.0% | |
| GTTCACTATGGGAAAATGCA+CGG | - | chr4_1:85697151-85697170 | Msa0580540:CDS | 40.0% | |
| !! | GGAAAATGCACGGTTTTATG+CGG | - | chr4_1:85697161-85697180 | Msa0580540:CDS | 40.0% |
| GGGCAAAGAAGATACTTGAA+TGG | - | chr4_1:85697378-85697397 | Msa0580540:intron | 40.0% | |
| CATATCTCAAGTGCTTCTTC+AGG | + | chr4_1:85697413-85697432 | None:intergenic | 40.0% | |
| ATCCATTTCATACTGCAGTC+AGG | + | chr4_1:85697553-85697572 | None:intergenic | 40.0% | |
| TGACTGCAGTATGAAATGGA+TGG | - | chr4_1:85697552-85697571 | Msa0580540:CDS | 40.0% | |
| GACTGCAGTATGAAATGGAT+GGG | - | chr4_1:85697553-85697572 | Msa0580540:CDS | 40.0% | |
| AGGGATCCAAGTGGTTATAA+CGG | - | chr4_1:85697576-85697595 | Msa0580540:CDS | 40.0% | |
| TATATGTGGGGTACATGATC+AGG | - | chr4_1:85697611-85697630 | Msa0580540:CDS | 40.0% | |
| GTAGCAAACAAGAACAAAGC+AGG | + | chr4_1:85697641-85697660 | None:intergenic | 40.0% | |
| GTTTCTATTCATTTCAGGGG+TGG | - | chr4_1:85697941-85697960 | Msa0580540:intron | 40.0% | |
| AATCCTCAGGATTACAACAG+CGG | + | chr4_1:85698125-85698144 | None:intergenic | 40.0% | |
| GTACATGTTCTTCAATCCTC+AGG | + | chr4_1:85698138-85698157 | None:intergenic | 40.0% | |
| CCAAACAATGGCAAATTACC+AGG | + | chr4_1:85698314-85698333 | None:intergenic | 40.0% | |
| ! | CCTGGTAATTTGCCATTGTT+TGG | - | chr4_1:85698311-85698330 | Msa0580540:CDS | 40.0% |
| TGGCTGATGATACTTGAAGT+AGG | - | chr4_1:85698331-85698350 | Msa0580540:CDS | 40.0% | |
| ! | AGATTTTTGTTGCGTGGCGT+AGG | + | chr4_1:85695047-85695066 | None:intergenic | 45.0% |
| ! | GATCGGAGATTTTTGTTGCG+TGG | + | chr4_1:85695053-85695072 | None:intergenic | 45.0% |
| TCTGAACATCCAGTACACGA+CGG | + | chr4_1:85695167-85695186 | None:intergenic | 45.0% | |
| AACAACGGCAACAGGAACTT+TGG | + | chr4_1:85695248-85695267 | None:intergenic | 45.0% | |
| !! | GCTGAAGTTGGTGACACAAT+TGG | + | chr4_1:85695339-85695358 | None:intergenic | 45.0% |
| TAAAGTCACACTCAGTGGCA+AGG | + | chr4_1:85695554-85695573 | None:intergenic | 45.0% | |
| TATATTATAGGGTGAGGCGG+AGG | - | chr4_1:85695834-85695853 | Msa0580540:intron | 45.0% | |
| CTCACAATGTTGTGCCTCTT+TGG | - | chr4_1:85695995-85696014 | Msa0580540:CDS | 45.0% | |
| TTCTCAGAAGCAACCCAAAG+AGG | + | chr4_1:85696012-85696031 | None:intergenic | 45.0% | |
| ! | TTGGGTTGCTTCTGAGAAGT+TGG | - | chr4_1:85696014-85696033 | Msa0580540:CDS | 45.0% |
| TGAGGACCATGTCATAGACT+GGG | - | chr4_1:85696140-85696159 | Msa0580540:intron | 45.0% | |
| AGACACGGCTGACAATAAGA+CGG | + | chr4_1:85696289-85696308 | None:intergenic | 45.0% | |
| TGTCAGTGCGAAGATTCACA+TGG | - | chr4_1:85696317-85696336 | Msa0580540:intron | 45.0% | |
| CTCAGCTCCACTCCTAATTT+AGG | + | chr4_1:85696383-85696402 | None:intergenic | 45.0% | |
| CTAAATTAGGAGTGGAGCTG+AGG | - | chr4_1:85696381-85696400 | Msa0580540:intron | 45.0% | |
| TCCATTGCAGCAATTTCTCC+AGG | + | chr4_1:85696430-85696449 | None:intergenic | 45.0% | |
| !! | TGCTGCAATGGAAGTGTTGA+TGG | - | chr4_1:85696438-85696457 | Msa0580540:CDS | 45.0% |
| !! | GCTGCAATGGAAGTGTTGAT+GGG | - | chr4_1:85696439-85696458 | Msa0580540:CDS | 45.0% |
| ACAAGGGTTATTGCGATCTG+TGG | + | chr4_1:85696506-85696525 | None:intergenic | 45.0% | |
| GGCTGTAGATACTTTCTTGG+AGG | - | chr4_1:85696737-85696756 | Msa0580540:CDS | 45.0% | |
| ! | ATTACAAGGAGCATGGGAGT+GGG | - | chr4_1:85696821-85696840 | Msa0580540:CDS | 45.0% |
| AACATGTGGTCGCTTATCAG+AGG | + | chr4_1:85696871-85696890 | None:intergenic | 45.0% | |
| GTGACTCACGTGTAAACATG+TGG | + | chr4_1:85696885-85696904 | None:intergenic | 45.0% | |
| TTCTTACAGAAGGGAGCAGT+TGG | - | chr4_1:85696961-85696980 | Msa0580540:intron | 45.0% | |
| CACCTGACTGCAGTATGAAA+TGG | - | chr4_1:85697548-85697567 | Msa0580540:CDS | 45.0% | |
| TGCAGTATGAAATGGATGGG+AGG | - | chr4_1:85697556-85697575 | Msa0580540:CDS | 45.0% | |
| GCAGTATGAAATGGATGGGA+GGG | - | chr4_1:85697557-85697576 | Msa0580540:CDS | 45.0% | |
| ATGCAGCCGTTATAACCACT+TGG | + | chr4_1:85697585-85697604 | None:intergenic | 45.0% | |
| GCTGCATGTGGTCTATATGT+GGG | - | chr4_1:85697598-85697617 | Msa0580540:CDS | 45.0% | |
| CTGCATGTGGTCTATATGTG+GGG | - | chr4_1:85697599-85697618 | Msa0580540:CDS | 45.0% | |
| GAGGAATTTCTGACTCCTGT+TGG | - | chr4_1:85697680-85697699 | Msa0580540:CDS | 45.0% | |
| TGAGCTCAGGAAGAGAAAAG+CGG | - | chr4_1:85698068-85698087 | Msa0580540:intron | 45.0% | |
| CCAGACAATGGCAAATTACC+AGG | + | chr4_1:85698198-85698217 | None:intergenic | 45.0% | |
| ! | CCTGGTAATTTGCCATTGTC+TGG | - | chr4_1:85698195-85698214 | Msa0580540:intron | 45.0% |
| AGTTTCGTCCTTGAACTGCA+AGG | + | chr4_1:85698399-85698418 | None:intergenic | 45.0% | |
| GTACTCCAACTCGAAAGAGT+TGG | - | chr4_1:85698427-85698446 | Msa0580540:CDS | 45.0% | |
| ! | TGAGACCAACTCTTTCGAGT+TGG | + | chr4_1:85698435-85698454 | None:intergenic | 45.0% |
| !!! | GATTTTTTTTTTTATATTAT+AGG | - | chr4_1:85695822-85695841 | Msa0580540:intron | 5.0% |
| CGCATTCGGACCTTGAAAGA+AGG | - | chr4_1:85695124-85695143 | Msa0580540:three_prime_UTR | 50.0% | |
| CGGACCTTGAAAGAAGGTTC+TGG | - | chr4_1:85695130-85695149 | Msa0580540:three_prime_UTR | 50.0% | |
| CTGAACATCCAGTACACGAC+GGG | + | chr4_1:85695166-85695185 | None:intergenic | 50.0% | |
| ! | GTGCAAAGGCGCGTCATTTA+GGG | - | chr4_1:85695293-85695312 | Msa0580540:three_prime_UTR | 50.0% |
| TCGAGCCGGACAATTTCACA+GGG | - | chr4_1:85695761-85695780 | Msa0580540:intron | 50.0% | |
| TCGAACCACCAACTGCGAAA+TGG | - | chr4_1:85696109-85696128 | Msa0580540:intron | 50.0% | |
| CGAACCACCAACTGCGAAAT+GGG | - | chr4_1:85696110-85696129 | Msa0580540:intron | 50.0% | |
| ATGACCCATTTCGCAGTTGG+TGG | + | chr4_1:85696117-85696136 | None:intergenic | 50.0% | |
| GTGATGACCCATTTCGCAGT+TGG | + | chr4_1:85696120-85696139 | None:intergenic | 50.0% | |
| TGCGAAATGGGTCATCACTG+AGG | - | chr4_1:85696122-85696141 | Msa0580540:intron | 50.0% | |
| CTGAGGACCATGTCATAGAC+TGG | - | chr4_1:85696139-85696158 | Msa0580540:intron | 50.0% | |
| CTGAGGTTCCTGAAGTGGAT+TGG | - | chr4_1:85696398-85696417 | Msa0580540:intron | 50.0% | |
| GCCTGGAGAAATTGCTGCAA+TGG | - | chr4_1:85696426-85696445 | Msa0580540:CDS | 50.0% | |
| GCTACGAGCTTCATATCCTC+AGG | - | chr4_1:85696609-85696628 | Msa0580540:CDS | 50.0% | |
| ! | CATTACAAGGAGCATGGGAG+TGG | - | chr4_1:85696820-85696839 | Msa0580540:CDS | 50.0% |
| GTGGTTATAACGGCTGCATG+TGG | - | chr4_1:85697586-85697605 | Msa0580540:CDS | 50.0% | |
| GGCTGCATGTGGTCTATATG+TGG | - | chr4_1:85697597-85697616 | Msa0580540:CDS | 50.0% | |
| !!! | TGCTTTTGGTGCCTCTAGCT+AGG | - | chr4_1:85697757-85697776 | Msa0580540:intron | 50.0% |
| AACTACCACAGCCTAGCTAG+AGG | + | chr4_1:85697771-85697790 | None:intergenic | 50.0% | |
| ACTCCGCTGTTGTAATCCTG+AGG | - | chr4_1:85698119-85698138 | Msa0580540:intron | 50.0% | |
| GTTGCACACCTTGCAGTTCA+AGG | - | chr4_1:85698388-85698407 | Msa0580540:CDS | 50.0% | |
| GACGGTGTGGTAGCCATGAT+CGG | + | chr4_1:85695070-85695089 | None:intergenic | 55.0% | |
| TTCACCGACGGCGAAATTGG+CGG | + | chr4_1:85695097-85695116 | None:intergenic | 55.0% | |
| TCAAGGTCCGAATGCGACCA+GGG | + | chr4_1:85695120-85695139 | None:intergenic | 55.0% | |
| TTCAAGGTCCGAATGCGACC+AGG | + | chr4_1:85695121-85695140 | None:intergenic | 55.0% | |
| ! | GGTGCAAAGGCGCGTCATTT+AGG | - | chr4_1:85695292-85695311 | Msa0580540:three_prime_UTR | 55.0% |
| ATGGGGGTAATTGCTCGAGC+CGG | - | chr4_1:85695747-85695766 | Msa0580540:intron | 55.0% | |
| CTCGAGCCGGACAATTTCAC+AGG | - | chr4_1:85695760-85695779 | Msa0580540:intron | 55.0% | |
| !! | GCAGTTGGTGGTTCGACATC+AGG | + | chr4_1:85696105-85696124 | None:intergenic | 55.0% |
| TGGAGCTGAGGTTCCTGAAG+TGG | - | chr4_1:85696393-85696412 | Msa0580540:intron | 55.0% | |
| GGCTCACACCAATCCACTTC+AGG | + | chr4_1:85696409-85696428 | None:intergenic | 55.0% | |
| !! | GAAGTGGATTGGTGTGAGCC+TGG | - | chr4_1:85696409-85696428 | Msa0580540:intron | 55.0% |
| ! | ATCAGAGGCGTGGTCGAGTA+AGG | + | chr4_1:85696856-85696875 | None:intergenic | 55.0% |
| CAGAAGGGAGCAGTTGGAGA+AGG | - | chr4_1:85696967-85696986 | Msa0580540:intron | 55.0% | |
| ATGGATGGGAGGGATCCAAG+TGG | - | chr4_1:85697567-85697586 | Msa0580540:CDS | 55.0% | |
| !!! | TGGCGAGAGCGTCCCATTTT+TGG | - | chr4_1:85697961-85697980 | Msa0580540:intron | 55.0% |
| !!! | GGCGAGAGCGTCCCATTTTT+GGG | - | chr4_1:85697962-85697981 | Msa0580540:intron | 55.0% |
| GGGTTCACCGACGGCGAAAT+TGG | + | chr4_1:85695100-85695119 | None:intergenic | 60.0% | |
| ATTTCGCCGTCGGTGAACCC+TGG | - | chr4_1:85695100-85695119 | Msa0580540:three_prime_UTR | 60.0% | |
| ATGCGACCAGGGTTCACCGA+CGG | + | chr4_1:85695109-85695128 | None:intergenic | 60.0% | |
| CGGTGAACCCTGGTCGCATT+CGG | - | chr4_1:85695110-85695129 | Msa0580540:three_prime_UTR | 60.0% | |
| AAACGGGTCCCGTCGTGTAC+TGG | - | chr4_1:85695155-85695174 | Msa0580540:three_prime_UTR | 60.0% | |
| GTGGTCGCTTATCAGAGGCG+TGG | + | chr4_1:85696866-85696885 | None:intergenic | 60.0% | |
| TGGTGCCTCTAGCTAGGCTG+TGG | - | chr4_1:85697763-85697782 | Msa0580540:intron | 60.0% | |
| ACCGACGGCGAAATTGGCGG+CGG | + | chr4_1:85695094-85695113 | None:intergenic | 65.0% | |
| AATTGGCGGCGGCGACGGTG+TGG | + | chr4_1:85695083-85695102 | None:intergenic | 70.0% | |
| GGCGAAATTGGCGGCGGCGA+CGG | + | chr4_1:85695088-85695107 | None:intergenic | 70.0% | |
| GCCGCCGCCAATTTCGCCGT+CGG | - | chr4_1:85695090-85695109 | Msa0580540:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 85695031 | 85698569 | 85695031 | ID=Msa0580540;Name=Msa0580540 |
| chr4_1 | mRNA | 85695031 | 85698569 | 85695031 | ID=Msa0580540-mRNA-1;Parent=Msa0580540;Name=Msa0580540-mRNA-1;_AED=0.12;_eAED=0.12;_QI=42|1|1|1|1|1|9|423|499 |
| chr4_1 | exon | 85695031 | 85695642 | 85695031 | ID=Msa0580540-mRNA-1:exon:31552;Parent=Msa0580540-mRNA-1 |
| chr4_1 | exon | 85695968 | 85696039 | 85695968 | ID=Msa0580540-mRNA-1:exon:31551;Parent=Msa0580540-mRNA-1 |
| chr4_1 | exon | 85696149 | 85696230 | 85696149 | ID=Msa0580540-mRNA-1:exon:31550;Parent=Msa0580540-mRNA-1 |
| chr4_1 | exon | 85696418 | 85696476 | 85696418 | ID=Msa0580540-mRNA-1:exon:31549;Parent=Msa0580540-mRNA-1 |
| chr4_1 | exon | 85696594 | 85696630 | 85696594 | ID=Msa0580540-mRNA-1:exon:31548;Parent=Msa0580540-mRNA-1 |
| chr4_1 | exon | 85696705 | 85696862 | 85696705 | ID=Msa0580540-mRNA-1:exon:31547;Parent=Msa0580540-mRNA-1 |
| chr4_1 | exon | 85696970 | 85697210 | 85696970 | ID=Msa0580540-mRNA-1:exon:31546;Parent=Msa0580540-mRNA-1 |
| chr4_1 | exon | 85697413 | 85697756 | 85697413 | ID=Msa0580540-mRNA-1:exon:31545;Parent=Msa0580540-mRNA-1 |
| chr4_1 | exon | 85698210 | 85698569 | 85698210 | ID=Msa0580540-mRNA-1:exon:31544;Parent=Msa0580540-mRNA-1 |
| chr4_1 | five_prime_UTR | 85698528 | 85698569 | 85698528 | ID=Msa0580540-mRNA-1:five_prime_utr;Parent=Msa0580540-mRNA-1 |
| chr4_1 | CDS | 85698210 | 85698527 | 85698210 | ID=Msa0580540-mRNA-1:cds;Parent=Msa0580540-mRNA-1 |
| chr4_1 | CDS | 85697413 | 85697756 | 85697413 | ID=Msa0580540-mRNA-1:cds;Parent=Msa0580540-mRNA-1 |
| chr4_1 | CDS | 85696970 | 85697210 | 85696970 | ID=Msa0580540-mRNA-1:cds;Parent=Msa0580540-mRNA-1 |
| chr4_1 | CDS | 85696705 | 85696862 | 85696705 | ID=Msa0580540-mRNA-1:cds;Parent=Msa0580540-mRNA-1 |
| chr4_1 | CDS | 85696594 | 85696630 | 85696594 | ID=Msa0580540-mRNA-1:cds;Parent=Msa0580540-mRNA-1 |
| chr4_1 | CDS | 85696418 | 85696476 | 85696418 | ID=Msa0580540-mRNA-1:cds;Parent=Msa0580540-mRNA-1 |
| chr4_1 | CDS | 85696149 | 85696230 | 85696149 | ID=Msa0580540-mRNA-1:cds;Parent=Msa0580540-mRNA-1 |
| chr4_1 | CDS | 85695968 | 85696039 | 85695968 | ID=Msa0580540-mRNA-1:cds;Parent=Msa0580540-mRNA-1 |
| chr4_1 | CDS | 85695454 | 85695642 | 85695454 | ID=Msa0580540-mRNA-1:cds;Parent=Msa0580540-mRNA-1 |
| chr4_1 | three_prime_UTR | 85695031 | 85695453 | 85695031 | ID=Msa0580540-mRNA-1:three_prime_utr;Parent=Msa0580540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
