Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0557460 | XP_013456959.1 | 78.173 | 394 | 44 | 5 | 1 | 388 | 1 | 358 | 1.17e-130 | 389 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0557460 | sp|Q01197|E6_GOSHI | 41.463 | 123 | 49 | 7 | 8 | 113 | 10 | 126 | 2.42e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0557460 | I3T3J6 | 78.173 | 394 | 44 | 5 | 1 | 388 | 1 | 358 | 5.57e-131 | 389 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0557460 | 0.854897 | 9.063199e-62 | -8.615850e-47 |
| Msa0002580 | Msa0557460 | 0.844727 | 6.319048e-59 | -8.615850e-47 |
| Msa0005890 | Msa0557460 | 0.838685 | 2.482251e-57 | -8.615850e-47 |
| Msa0008040 | Msa0557460 | 0.824648 | 7.203184e-54 | -8.615850e-47 |
| Msa0017930 | Msa0557460 | 0.804430 | 2.168800e-49 | -8.615850e-47 |
| Msa0018160 | Msa0557460 | 0.825613 | 4.260439e-54 | -8.615850e-47 |
| Msa0021500 | Msa0557460 | 0.808746 | 2.661238e-50 | -8.615850e-47 |
| Msa0025160 | Msa0557460 | 0.834988 | 2.179222e-56 | -8.615850e-47 |
| Msa0025580 | Msa0557460 | 0.810784 | 9.702220e-51 | -8.615850e-47 |
| Msa0027280 | Msa0557460 | 0.865970 | 4.012453e-65 | -8.615850e-47 |
| Msa0029970 | Msa0557460 | 0.819847 | 9.365282e-53 | -8.615850e-47 |
| Msa0034210 | Msa0557460 | 0.862596 | 4.531798e-64 | -8.615850e-47 |
| Msa0034810 | Msa0557460 | 0.811472 | 6.881240e-51 | -8.615850e-47 |
| Msa0036870 | Msa0557460 | 0.856936 | 2.296478e-62 | -8.615850e-47 |
| Msa0042640 | Msa0557460 | 0.816242 | 6.116147e-52 | -8.615850e-47 |
| Msa0048510 | Msa0557460 | 0.845976 | 2.901384e-59 | -8.615850e-47 |
| Msa0050660 | Msa0557460 | 0.873551 | 1.347459e-67 | -8.615850e-47 |
| Msa0050700 | Msa0557460 | 0.876978 | 9.078640e-69 | -8.615850e-47 |
| Msa0050790 | Msa0557460 | 0.878632 | 2.399895e-69 | -8.615850e-47 |
| Msa0052260 | Msa0557460 | 0.815984 | 6.986130e-52 | -8.615850e-47 |
| Msa0054690 | Msa0557460 | 0.855318 | 6.835993e-62 | -8.615850e-47 |
| Msa0067330 | Msa0557460 | 0.809535 | 1.803701e-50 | -8.615850e-47 |
| Msa0071850 | Msa0557460 | 0.827496 | 1.515511e-54 | -8.615850e-47 |
| Msa0071860 | Msa0557460 | 0.838204 | 3.304986e-57 | -8.615850e-47 |
| Msa0071880 | Msa0557460 | 0.812964 | 3.252711e-51 | -8.615850e-47 |
| Msa0074020 | Msa0557460 | 0.829814 | 4.169790e-55 | -8.615850e-47 |
| Msa0077340 | Msa0557460 | 0.800006 | 1.764144e-48 | -8.615850e-47 |
| Msa0090400 | Msa0557460 | 0.845060 | 5.137959e-59 | -8.615850e-47 |
| Msa0094780 | Msa0557460 | 0.836340 | 9.912239e-57 | -8.615850e-47 |
| Msa0094790 | Msa0557460 | 0.808167 | 3.538370e-50 | -8.615850e-47 |
| Msa0097090 | Msa0557460 | 0.811949 | 5.420519e-51 | -8.615850e-47 |
| Msa0098040 | Msa0557460 | 0.803893 | 2.805357e-49 | -8.615850e-47 |
| Msa0108880 | Msa0557460 | 0.834209 | 3.421003e-56 | -8.615850e-47 |
| Msa0121330 | Msa0557460 | 0.809432 | 1.898070e-50 | -8.615850e-47 |
| Msa0123070 | Msa0557460 | 0.823718 | 1.191435e-53 | -8.615850e-47 |
| Msa0123340 | Msa0557460 | 0.825825 | 3.795574e-54 | -8.615850e-47 |
| Msa0125210 | Msa0557460 | 0.824928 | 6.186746e-54 | -8.615850e-47 |
| Msa0125360 | Msa0557460 | 0.824230 | 9.031830e-54 | -8.615850e-47 |
| Msa0128310 | Msa0557460 | 0.872161 | 3.932326e-67 | -8.615850e-47 |
| Msa0136650 | Msa0557460 | 0.858757 | 6.616635e-63 | -8.615850e-47 |
| Msa0137880 | Msa0557460 | 0.814831 | 1.261000e-51 | -8.615850e-47 |
| Msa0140280 | Msa0557460 | 0.827813 | 1.271610e-54 | -8.615850e-47 |
| Msa0146040 | Msa0557460 | 0.832443 | 9.427495e-56 | -8.615850e-47 |
| Msa0149350 | Msa0557460 | 0.840501 | 8.373506e-58 | -8.615850e-47 |
| Msa0158860 | Msa0557460 | 0.824065 | 9.875066e-54 | -8.615850e-47 |
| Msa0161930 | Msa0557460 | 0.807933 | 3.967889e-50 | -8.615850e-47 |
| Msa0168070 | Msa0557460 | 0.823265 | 1.519844e-53 | -8.615850e-47 |
| Msa0174440 | Msa0557460 | 0.861827 | 7.800063e-64 | -8.615850e-47 |
| Msa0174450 | Msa0557460 | 0.877433 | 6.307111e-69 | -8.615850e-47 |
| Msa0178560 | Msa0557460 | 0.804120 | 2.516244e-49 | -8.615850e-47 |
| Msa0182190 | Msa0557460 | 0.804833 | 1.787154e-49 | -8.615850e-47 |
| Msa0182240 | Msa0557460 | 0.809571 | 1.771681e-50 | -8.615850e-47 |
| Msa0186640 | Msa0557460 | 0.812901 | 3.356852e-51 | -8.615850e-47 |
| Msa0188610 | Msa0557460 | 0.833409 | 5.422196e-56 | -8.615850e-47 |
| Msa0190570 | Msa0557460 | 0.857749 | 1.320300e-62 | -8.615850e-47 |
| Msa0191020 | Msa0557460 | 0.805790 | 1.125942e-49 | -8.615850e-47 |
| Msa0200050 | Msa0557460 | 0.840585 | 7.957199e-58 | -8.615850e-47 |
| Msa0208030 | Msa0557460 | 0.804825 | 1.793677e-49 | -8.615850e-47 |
| Msa0213030 | Msa0557460 | 0.831794 | 1.363712e-55 | -8.615850e-47 |
| Msa0222560 | Msa0557460 | 0.803152 | 3.995434e-49 | -8.615850e-47 |
| Msa0225100 | Msa0557460 | 0.861054 | 1.342826e-63 | -8.615850e-47 |
| Msa0225460 | Msa0557460 | 0.803675 | 3.113582e-49 | -8.615850e-47 |
| Msa0225860 | Msa0557460 | 0.872543 | 2.933971e-67 | -8.615850e-47 |
| Msa0230800 | Msa0557460 | 0.828175 | 1.040337e-54 | -8.615850e-47 |
| Msa0230870 | Msa0557460 | 0.818584 | 1.816203e-52 | -8.615850e-47 |
| Msa0233320 | Msa0557460 | 0.807437 | 5.057927e-50 | -8.615850e-47 |
| Msa0364120 | Msa0557460 | 0.802550 | 5.319500e-49 | -8.615850e-47 |
| Msa0369790 | Msa0557460 | 0.899611 | 1.669830e-77 | -8.615850e-47 |
| Msa0378720 | Msa0557460 | 0.825571 | 4.360100e-54 | -8.615850e-47 |
| Msa0380620 | Msa0557460 | 0.873344 | 1.581428e-67 | -8.615850e-47 |
| Msa0380670 | Msa0557460 | 0.827958 | 1.173621e-54 | -8.615850e-47 |
| Msa0390970 | Msa0557460 | 0.825100 | 5.633386e-54 | -8.615850e-47 |
| Msa0392380 | Msa0557460 | 0.818544 | 1.854287e-52 | -8.615850e-47 |
| Msa0400000 | Msa0557460 | 0.801088 | 1.061680e-48 | -8.615850e-47 |
| Msa0405680 | Msa0557460 | 0.851855 | 6.760222e-61 | -8.615850e-47 |
| Msa0405690 | Msa0557460 | 0.825635 | 4.209352e-54 | -8.615850e-47 |
| Msa0415610 | Msa0557460 | 0.819790 | 9.654172e-53 | -8.615850e-47 |
| Msa0419540 | Msa0557460 | 0.800122 | 1.671354e-48 | -8.615850e-47 |
| Msa0419700 | Msa0557460 | 0.825082 | 5.691577e-54 | -8.615850e-47 |
| Msa0428370 | Msa0557460 | 0.859305 | 4.535893e-63 | -8.615850e-47 |
| Msa0430260 | Msa0557460 | 0.864413 | 1.237854e-64 | -8.615850e-47 |
| Msa0430300 | Msa0557460 | 0.830564 | 2.735805e-55 | -8.615850e-47 |
| Msa0433150 | Msa0557460 | 0.808547 | 2.935771e-50 | -8.615850e-47 |
| Msa0435210 | Msa0557460 | 0.863184 | 2.983730e-64 | -8.615850e-47 |
| Msa0436910 | Msa0557460 | 0.847067 | 1.461627e-59 | -8.615850e-47 |
| Msa0440320 | Msa0557460 | 0.816226 | 6.167565e-52 | -8.615850e-47 |
| Msa0453040 | Msa0557460 | 0.812812 | 3.510745e-51 | -8.615850e-47 |
| Msa0460630 | Msa0557460 | 0.805804 | 1.118312e-49 | -8.615850e-47 |
| Msa0464000 | Msa0557460 | 0.897175 | 1.813652e-76 | -8.615850e-47 |
| Msa0467490 | Msa0557460 | 0.805475 | 1.311323e-49 | -8.615850e-47 |
| Msa0472950 | Msa0557460 | 0.863608 | 2.204197e-64 | -8.615850e-47 |
| Msa0474730 | Msa0557460 | 0.840436 | 8.704856e-58 | -8.615850e-47 |
| Msa0476650 | Msa0557460 | 0.807929 | 3.976262e-50 | -8.615850e-47 |
| Msa0479320 | Msa0557460 | 0.845313 | 4.388860e-59 | -8.615850e-47 |
| Msa0242590 | Msa0557460 | 0.864026 | 1.635173e-64 | -8.615850e-47 |
| Msa0243600 | Msa0557460 | 0.807430 | 5.073666e-50 | -8.615850e-47 |
| Msa0244640 | Msa0557460 | 0.852828 | 3.572099e-61 | -8.615850e-47 |
| Msa0251710 | Msa0557460 | 0.809497 | 1.837727e-50 | -8.615850e-47 |
| Msa0260510 | Msa0557460 | 0.842666 | 2.249117e-58 | -8.615850e-47 |
| Msa0265850 | Msa0557460 | 0.803205 | 3.895991e-49 | -8.615850e-47 |
| Msa0266180 | Msa0557460 | 0.844109 | 9.264532e-59 | -8.615850e-47 |
| Msa0267110 | Msa0557460 | 0.816769 | 4.661442e-52 | -8.615850e-47 |
| Msa0270340 | Msa0557460 | 0.836674 | 8.149991e-57 | -8.615850e-47 |
| Msa0275770 | Msa0557460 | 0.804301 | 2.306560e-49 | -8.615850e-47 |
| Msa0275820 | Msa0557460 | 0.835008 | 2.154835e-56 | -8.615850e-47 |
| Msa0276440 | Msa0557460 | 0.806462 | 8.129500e-50 | -8.615850e-47 |
| Msa0279690 | Msa0557460 | 0.813104 | 3.030046e-51 | -8.615850e-47 |
| Msa0280790 | Msa0557460 | 0.855974 | 4.398973e-62 | -8.615850e-47 |
| Msa0282220 | Msa0557460 | 0.802360 | 5.822323e-49 | -8.615850e-47 |
| Msa0283330 | Msa0557460 | 0.826428 | 2.727296e-54 | -8.615850e-47 |
| Msa0287740 | Msa0557460 | 0.861304 | 1.127114e-63 | -8.615850e-47 |
| Msa0290720 | Msa0557460 | 0.841341 | 5.038988e-58 | -8.615850e-47 |
| Msa0292160 | Msa0557460 | 0.836173 | 1.092757e-56 | -8.615850e-47 |
| Msa0298470 | Msa0557460 | 0.843166 | 1.656046e-58 | -8.615850e-47 |
| Msa0307270 | Msa0557460 | 0.836199 | 1.076361e-56 | -8.615850e-47 |
| Msa0307670 | Msa0557460 | 0.808310 | 3.297489e-50 | -8.615850e-47 |
| Msa0321620 | Msa0557460 | 0.827083 | 1.903124e-54 | -8.615850e-47 |
| Msa0330380 | Msa0557460 | 0.828962 | 6.715316e-55 | -8.615850e-47 |
| Msa0337700 | Msa0557460 | 0.803075 | 4.143815e-49 | -8.615850e-47 |
| Msa0338340 | Msa0557460 | 0.801473 | 8.856236e-49 | -8.615850e-47 |
| Msa0339650 | Msa0557460 | 0.805160 | 1.526145e-49 | -8.615850e-47 |
| Msa0340500 | Msa0557460 | 0.841220 | 5.423359e-58 | -8.615850e-47 |
| Msa0359020 | Msa0557460 | 0.857285 | 1.811571e-62 | -8.615850e-47 |
| Msa0483100 | Msa0557460 | 0.813635 | 2.317007e-51 | -8.615850e-47 |
| Msa0487500 | Msa0557460 | 0.808629 | 2.819137e-50 | -8.615850e-47 |
| Msa0500380 | Msa0557460 | 0.836249 | 1.045165e-56 | -8.615850e-47 |
| Msa0509550 | Msa0557460 | 0.888111 | 7.883048e-73 | -8.615850e-47 |
| Msa0511750 | Msa0557460 | 0.816807 | 4.571351e-52 | -8.615850e-47 |
| Msa0517250 | Msa0557460 | 0.814503 | 1.490148e-51 | -8.615850e-47 |
| Msa0519750 | Msa0557460 | 0.843285 | 1.539224e-58 | -8.615850e-47 |
| Msa0519820 | Msa0557460 | 0.830599 | 2.682158e-55 | -8.615850e-47 |
| Msa0519830 | Msa0557460 | 0.851296 | 9.734565e-61 | -8.615850e-47 |
| Msa0528570 | Msa0557460 | 0.945149 | 5.232180e-104 | -8.615850e-47 |
| Msa0529030 | Msa0557460 | 0.838400 | 2.941017e-57 | -8.615850e-47 |
| Msa0530780 | Msa0557460 | 0.821017 | 5.047436e-53 | -8.615850e-47 |
| Msa0531960 | Msa0557460 | 0.811289 | 7.542273e-51 | -8.615850e-47 |
| Msa0541300 | Msa0557460 | 0.858704 | 6.861843e-63 | -8.615850e-47 |
| Msa0541310 | Msa0557460 | 0.858268 | 9.255243e-63 | -8.615850e-47 |
| Msa0543660 | Msa0557460 | 0.859675 | 3.510615e-63 | -8.615850e-47 |
| Msa0546800 | Msa0557460 | 0.809043 | 2.299490e-50 | -8.615850e-47 |
| Msa0547900 | Msa0557460 | 0.810123 | 1.347847e-50 | -8.615850e-47 |
| Msa0548470 | Msa0557460 | 0.902659 | 7.730732e-79 | -8.615850e-47 |
| Msa0549370 | Msa0557460 | 0.822053 | 2.910434e-53 | -8.615850e-47 |
| Msa0550050 | Msa0557460 | 0.838970 | 2.095630e-57 | -8.615850e-47 |
| Msa0556640 | Msa0557460 | 0.814683 | 1.360058e-51 | -8.615850e-47 |
| Msa0557370 | Msa0557460 | 0.875812 | 2.294388e-68 | -8.615850e-47 |
| Msa0557460 | Msa0567170 | 0.833433 | 5.347789e-56 | -8.615850e-47 |
| Msa0557460 | Msa0570120 | 0.802032 | 6.799490e-49 | -8.615850e-47 |
| Msa0557460 | Msa0571290 | 0.849052 | 4.141480e-60 | -8.615850e-47 |
| Msa0557460 | Msa0580370 | 0.873713 | 1.187613e-67 | -8.615850e-47 |
| Msa0557460 | Msa0583360 | -0.812482 | 4.146738e-51 | -8.615850e-47 |
| Msa0557460 | Msa0584420 | 0.865407 | 6.040200e-65 | -8.615850e-47 |
| Msa0557460 | Msa0585020 | 0.866035 | 3.825237e-65 | -8.615850e-47 |
| Msa0557460 | Msa0587620 | 0.823258 | 1.526278e-53 | -8.615850e-47 |
| Msa0557460 | Msa0590830 | 0.801614 | 8.286469e-49 | -8.615850e-47 |
| Msa0557460 | Msa0597270 | 0.861965 | 7.080483e-64 | -8.615850e-47 |
| Msa0557460 | Msa0597790 | 0.802653 | 5.065792e-49 | -8.615850e-47 |
| Msa0557460 | Msa0602880 | 0.800520 | 1.387040e-48 | -8.615850e-47 |
| Msa0557460 | Msa0605560 | 0.831708 | 1.432080e-55 | -8.615850e-47 |
| Msa0557460 | Msa0608330 | 0.829937 | 3.890987e-55 | -8.615850e-47 |
| Msa0557460 | Msa0611210 | 0.844233 | 8.582301e-59 | -8.615850e-47 |
| Msa0557460 | Msa0611900 | 0.808192 | 3.495407e-50 | -8.615850e-47 |
| Msa0557460 | Msa0612060 | 0.817734 | 2.828407e-52 | -8.615850e-47 |
| Msa0557460 | Msa0616210 | 0.835710 | 1.432184e-56 | -8.615850e-47 |
| Msa0557460 | Msa0620980 | 0.808714 | 2.704485e-50 | -8.615850e-47 |
| Msa0557460 | Msa0621710 | 0.808069 | 3.711141e-50 | -8.615850e-47 |
| Msa0557460 | Msa0626450 | 0.866180 | 3.441892e-65 | -8.615850e-47 |
| Msa0557460 | Msa0626490 | 0.861875 | 7.541345e-64 | -8.615850e-47 |
| Msa0557460 | Msa0640200 | 0.832332 | 1.003925e-55 | -8.615850e-47 |
| Msa0557460 | Msa0644410 | 0.881501 | 2.277602e-70 | -8.615850e-47 |
| Msa0557460 | Msa0646510 | 0.816232 | 6.149059e-52 | -8.615850e-47 |
| Msa0557460 | Msa0651550 | 0.833005 | 6.835450e-56 | -8.615850e-47 |
| Msa0557460 | Msa0652170 | 0.804757 | 1.852841e-49 | -8.615850e-47 |
| Msa0557460 | Msa0655700 | 0.815162 | 1.064938e-51 | -8.615850e-47 |
| Msa0557460 | Msa0657440 | 0.809208 | 2.119349e-50 | -8.615850e-47 |
| Msa0557460 | Msa0658640 | 0.833081 | 6.543828e-56 | -8.615850e-47 |
| Msa0557460 | Msa0661150 | 0.851266 | 9.923582e-61 | -8.615850e-47 |
| Msa0557460 | Msa0662110 | 0.803441 | 3.481091e-49 | -8.615850e-47 |
| Msa0557460 | Msa0664600 | 0.865527 | 5.537917e-65 | -8.615850e-47 |
| Msa0557460 | Msa0666700 | 0.829547 | 4.843320e-55 | -8.615850e-47 |
| Msa0557460 | Msa0674480 | 0.800138 | 1.658748e-48 | -8.615850e-47 |
| Msa0557460 | Msa0675330 | 0.866242 | 3.290335e-65 | -8.615850e-47 |
| Msa0557460 | Msa0678490 | 0.828782 | 7.423785e-55 | -8.615850e-47 |
| Msa0557460 | Msa0683470 | 0.801086 | 1.062770e-48 | -8.615850e-47 |
| Msa0557460 | Msa0683960 | 0.815856 | 7.459315e-52 | -8.615850e-47 |
| Msa0557460 | Msa0693890 | 0.855950 | 4.472900e-62 | -8.615850e-47 |
| Msa0557460 | Msa0699490 | 0.815974 | 7.021864e-52 | -8.615850e-47 |
| Msa0557460 | Msa0699540 | 0.835759 | 1.391854e-56 | -8.615850e-47 |
| Msa0557460 | Msa0700460 | 0.832371 | 9.821673e-56 | -8.615850e-47 |
| Msa0557460 | Msa0701700 | 0.822268 | 2.593909e-53 | -8.615850e-47 |
| Msa0557460 | Msa0703600 | 0.813379 | 2.637680e-51 | -8.615850e-47 |
| Msa0557460 | Msa0709200 | 0.810646 | 1.039428e-50 | -8.615850e-47 |
| Msa0557460 | Msa0713700 | 0.828636 | 8.050473e-55 | -8.615850e-47 |
| Msa0557460 | Msa0720410 | 0.814070 | 1.858048e-51 | -8.615850e-47 |
| Msa0557460 | Msa0721080 | 0.851441 | 8.856482e-61 | -8.615850e-47 |
| Msa0557460 | Msa0724800 | 0.808016 | 3.810402e-50 | -8.615850e-47 |
| Msa0557460 | Msa0725750 | 0.807746 | 4.347065e-50 | -8.615850e-47 |
| Msa0557460 | Msa0725770 | 0.834634 | 2.676659e-56 | -8.615850e-47 |
| Msa0557460 | Msa0727640 | 0.818790 | 1.631038e-52 | -8.615850e-47 |
| Msa0557460 | Msa0729270 | 0.801920 | 7.169883e-49 | -8.615850e-47 |
| Msa0557460 | Msa0735780 | 0.850906 | 1.253790e-60 | -8.615850e-47 |
| Msa0557460 | Msa0738700 | 0.907570 | 4.391472e-81 | -8.615850e-47 |
| Msa0557460 | Msa0741220 | 0.873344 | 1.580805e-67 | -8.615850e-47 |
| Msa0557460 | Msa0741650 | 0.814107 | 1.823308e-51 | -8.615850e-47 |
| Msa0557460 | Msa0756490 | 0.832098 | 1.147560e-55 | -8.615850e-47 |
| Msa0557460 | Msa0761670 | 0.857043 | 2.135789e-62 | -8.615850e-47 |
| Msa0557460 | Msa0766350 | 0.806281 | 8.875756e-50 | -8.615850e-47 |
| Msa0557460 | Msa0768990 | 0.827234 | 1.750987e-54 | -8.615850e-47 |
| Msa0557460 | Msa0773630 | 0.818593 | 1.807434e-52 | -8.615850e-47 |
| Msa0557460 | Msa0778590 | 0.820548 | 6.473125e-53 | -8.615850e-47 |
| Msa0557460 | Msa0783530 | 0.847593 | 1.048558e-59 | -8.615850e-47 |
| Msa0557460 | Msa0791730 | 0.819974 | 8.761599e-53 | -8.615850e-47 |
| Msa0557460 | Msa0792370 | 0.813392 | 2.620186e-51 | -8.615850e-47 |
| Msa0557460 | Msa0795870 | 0.875442 | 3.072441e-68 | -8.615850e-47 |
| Msa0557460 | Msa0799970 | 0.803686 | 3.096763e-49 | -8.615850e-47 |
| Msa0557460 | Msa0803250 | 0.814674 | 1.366145e-51 | -8.615850e-47 |
| Msa0557460 | Msa0815960 | 0.808567 | 2.906126e-50 | -8.615850e-47 |
| Msa0557460 | Msa0819170 | 0.873553 | 1.344479e-67 | -8.615850e-47 |
| Msa0557460 | Msa0824450 | 0.840636 | 7.716826e-58 | -8.615850e-47 |
| Msa0557460 | Msa0829300 | 0.828027 | 1.129088e-54 | -8.615850e-47 |
| Msa0557460 | Msa0829330 | 0.822245 | 2.625865e-53 | -8.615850e-47 |
| Msa0557460 | Msa0833650 | 0.871136 | 8.601121e-67 | -8.615850e-47 |
| Msa0557460 | Msa0835490 | 0.835105 | 2.036186e-56 | -8.615850e-47 |
| Msa0557460 | Msa0843050 | 0.808924 | 2.438681e-50 | -8.615850e-47 |
| Msa0557460 | Msa0859290 | 0.894070 | 3.482793e-75 | -8.615850e-47 |
| Msa0557460 | Msa0861600 | 0.810564 | 1.082738e-50 | -8.615850e-47 |
| Msa0557460 | Msa0861850 | 0.843746 | 1.159412e-58 | -8.615850e-47 |
| Msa0557460 | Msa0866520 | 0.806955 | 6.398166e-50 | -8.615850e-47 |
| Msa0557460 | Msa0871880 | 0.820446 | 6.828562e-53 | -8.615850e-47 |
| Msa0557460 | Msa0876930 | 0.855387 | 6.526348e-62 | -8.615850e-47 |
| Msa0557460 | Msa0876940 | 0.848464 | 6.028875e-60 | -8.615850e-47 |
| Msa0557460 | Msa0905240 | 0.840108 | 1.060470e-57 | -8.615850e-47 |
| Msa0557460 | Msa0921590 | 0.807282 | 5.453553e-50 | -8.615850e-47 |
| Msa0557460 | Msa0935820 | 0.806132 | 9.542022e-50 | -8.615850e-47 |
| Msa0557460 | Msa0937230 | 0.828707 | 7.739960e-55 | -8.615850e-47 |
| Msa0557460 | Msa0967870 | 0.851275 | 9.865974e-61 | -8.615850e-47 |
| Msa0557460 | Msa0974520 | 0.838635 | 2.557311e-57 | -8.615850e-47 |
| Msa0557460 | Msa0979180 | 0.829574 | 4.771033e-55 | -8.615850e-47 |
| Msa0557460 | Msa0981320 | 0.822443 | 2.362450e-53 | -8.615850e-47 |
| Msa0557460 | Msa1009950 | 0.822860 | 1.889890e-53 | -8.615850e-47 |
| Msa0557460 | Msa1019430 | 0.805968 | 1.033071e-49 | -8.615850e-47 |
| Msa0557460 | Msa1019470 | 0.801870 | 7.342886e-49 | -8.615850e-47 |
| Msa0557460 | Msa1020480 | 0.853545 | 2.226483e-61 | -8.615850e-47 |
| Msa0557460 | Msa1020510 | 0.805732 | 1.158276e-49 | -8.615850e-47 |
| Msa0557460 | Msa1021590 | 0.809206 | 2.122276e-50 | -8.615850e-47 |
| Msa0557460 | Msa1023500 | 0.800269 | 1.559855e-48 | -8.615850e-47 |
| Msa0557460 | Msa1023570 | 0.815192 | 1.048638e-51 | -8.615850e-47 |
| Msa0557460 | Msa1029800 | 0.810579 | 1.074627e-50 | -8.615850e-47 |
| Msa0557460 | Msa1031400 | 0.821461 | 3.987898e-53 | -8.615850e-47 |
| Msa0557460 | Msa1042160 | 0.860451 | 2.046521e-63 | -8.615850e-47 |
| Msa0557460 | Msa1042190 | 0.865601 | 5.248361e-65 | -8.615850e-47 |
| Msa0557460 | Msa1044680 | 0.823475 | 1.357511e-53 | -8.615850e-47 |
| Msa0557460 | Msa1045140 | 0.810917 | 9.079079e-51 | -8.615850e-47 |
| Msa0557460 | Msa1051900 | 0.811585 | 6.505428e-51 | -8.615850e-47 |
| Msa0557460 | Msa1065460 | 0.802168 | 6.375336e-49 | -8.615850e-47 |
| Msa0557460 | Msa1068920 | 0.835854 | 1.316929e-56 | -8.615850e-47 |
| Msa0557460 | Msa1072940 | 0.847685 | 9.888662e-60 | -8.615850e-47 |
| Msa0557460 | Msa1081390 | 0.836183 | 1.086552e-56 | -8.615850e-47 |
| Msa0557460 | Msa1081690 | 0.817436 | 3.300815e-52 | -8.615850e-47 |
| Msa0557460 | Msa1082200 | 0.808494 | 3.013716e-50 | -8.615850e-47 |
| Msa0557460 | Msa1085330 | 0.803079 | 4.137383e-49 | -8.615850e-47 |
| Msa0557460 | Msa1085490 | 0.827857 | 1.240836e-54 | -8.615850e-47 |
| Msa0557460 | Msa1096960 | 0.853518 | 2.267084e-61 | -8.615850e-47 |
| Msa0557460 | Msa1105640 | 0.825964 | 3.516549e-54 | -8.615850e-47 |
| Msa0557460 | Msa1105780 | 0.829348 | 5.411829e-55 | -8.615850e-47 |
| Msa0557460 | Msa1106510 | 0.809258 | 2.067846e-50 | -8.615850e-47 |
| Msa0557460 | Msa1116220 | 0.839892 | 1.207047e-57 | -8.615850e-47 |
| Msa0557460 | Msa1116660 | 0.800834 | 1.196783e-48 | -8.615850e-47 |
| Msa0557460 | Msa1117920 | 0.823692 | 1.208109e-53 | -8.615850e-47 |
| Msa0557460 | Msa1123210 | 0.832269 | 1.040736e-55 | -8.615850e-47 |
| Msa0557460 | Msa1125990 | 0.802464 | 5.540639e-49 | -8.615850e-47 |
| Msa0557460 | Msa1130230 | 0.800230 | 1.588958e-48 | -8.615850e-47 |
| Msa0557460 | Msa1132530 | 0.800523 | 1.384618e-48 | -8.615850e-47 |
| Msa0557460 | Msa1132840 | 0.872975 | 2.103052e-67 | -8.615850e-47 |
| Msa0557460 | Msa1140220 | 0.822197 | 2.693865e-53 | -8.615850e-47 |
| Msa0557460 | Msa1147740 | 0.801013 | 1.099833e-48 | -8.615850e-47 |
| Msa0557460 | Msa1155170 | -0.844764 | 6.175199e-59 | -8.615850e-47 |
| Msa0557460 | Msa1160920 | 0.853429 | 2.403300e-61 | -8.615850e-47 |
| Msa0557460 | Msa1161680 | 0.837427 | 5.231860e-57 | -8.615850e-47 |
| Msa0557460 | Msa1162590 | 0.813778 | 2.154295e-51 | -8.615850e-47 |
| Msa0557460 | Msa1167470 | 0.849104 | 4.004757e-60 | -8.615850e-47 |
| Msa0557460 | Msa1175180 | 0.828813 | 7.295439e-55 | -8.615850e-47 |
| Msa0557460 | Msa1186020 | 0.834343 | 3.166585e-56 | -8.615850e-47 |
| Msa0557460 | Msa1192570 | 0.825177 | 5.402574e-54 | -8.615850e-47 |
| Msa0557460 | Msa1200890 | 0.843148 | 1.674676e-58 | -8.615850e-47 |
| Msa0557460 | Msa1208950 | 0.843118 | 1.705894e-58 | -8.615850e-47 |
| Msa0557460 | Msa1215870 | 0.823129 | 1.635430e-53 | -8.615850e-47 |
| Msa0557460 | Msa1223470 | 0.801472 | 8.861501e-49 | -8.615850e-47 |
| Msa0557460 | Msa1223570 | 0.846220 | 2.491118e-59 | -8.615850e-47 |
| Msa0557460 | Msa1224930 | 0.803122 | 4.053199e-49 | -8.615850e-47 |
| Msa0557460 | Msa1225690 | 0.804495 | 2.102291e-49 | -8.615850e-47 |
| Msa0557460 | Msa1225860 | -0.811655 | 6.282042e-51 | -8.615850e-47 |
| Msa0557460 | Msa1226520 | 0.838005 | 3.718188e-57 | -8.615850e-47 |
| Msa0557460 | Msa1235410 | 0.818166 | 2.258882e-52 | -8.615850e-47 |
| Msa0557460 | Msa1240770 | 0.822505 | 2.285716e-53 | -8.615850e-47 |
| Msa0557460 | Msa1263490 | 0.841067 | 5.947819e-58 | -8.615850e-47 |
| Msa0557460 | Msa1265650 | 0.845485 | 3.944686e-59 | -8.615850e-47 |
| Msa0557460 | Msa1268630 | 0.824701 | 7.000333e-54 | -8.615850e-47 |
| Msa0557460 | Msa1269480 | 0.817685 | 2.901167e-52 | -8.615850e-47 |
| Msa0557460 | Msa1277150 | 0.845553 | 3.780464e-59 | -8.615850e-47 |
| Msa0557460 | Msa1277220 | 0.838995 | 2.064681e-57 | -8.615850e-47 |
| Msa0557460 | Msa1297230 | 0.833613 | 4.824117e-56 | -8.615850e-47 |
| Msa0557460 | Msa1303560 | 0.822210 | 2.675265e-53 | -8.615850e-47 |
| Msa0557460 | Msa1303650 | 0.826839 | 2.176103e-54 | -8.615850e-47 |
| Msa0557460 | Msa1307630 | 0.806019 | 1.008005e-49 | -8.615850e-47 |
| Msa0557460 | Msa1315160 | 0.818731 | 1.681669e-52 | -8.615850e-47 |
| Msa0557460 | Msa1315590 | 0.810358 | 1.199185e-50 | -8.615850e-47 |
| Msa0557460 | Msa1316330 | 0.804541 | 2.056261e-49 | -8.615850e-47 |
| Msa0557460 | Msa1320670 | 0.808504 | 2.997695e-50 | -8.615850e-47 |
| Msa0557460 | Msa1321340 | 0.828010 | 1.140177e-54 | -8.615850e-47 |
| Msa0557460 | Msa1336610 | 0.802351 | 5.845417e-49 | -8.615850e-47 |
| Msa0557460 | Msa1343170 | 0.850609 | 1.520139e-60 | -8.615850e-47 |
| Msa0557460 | Msa1343180 | 0.862815 | 3.879754e-64 | -8.615850e-47 |
| Msa0557460 | Msa1343430 | 0.821917 | 3.128833e-53 | -8.615850e-47 |
| Msa0557460 | Msa1346560 | 0.812778 | 3.572592e-51 | -8.615850e-47 |
| Msa0557460 | Msa1348090 | 0.823967 | 1.041384e-53 | -8.615850e-47 |
| Msa0557460 | Msa1349890 | 0.811230 | 7.768438e-51 | -8.615850e-47 |
| Msa0557460 | Msa1359690 | 0.842444 | 2.576029e-58 | -8.615850e-47 |
| Msa0557460 | Msa1364410 | 0.808198 | 3.484994e-50 | -8.615850e-47 |
| Msa0557460 | Msa1372040 | 0.872597 | 2.814923e-67 | -8.615850e-47 |
| Msa0557460 | Msa1372230 | 0.811399 | 7.137528e-51 | -8.615850e-47 |
| Msa0557460 | Msa1384460 | 0.853069 | 3.048084e-61 | -8.615850e-47 |
| Msa0557460 | Msa1387620 | 0.843777 | 1.137533e-58 | -8.615850e-47 |
| Msa0557460 | Msa1390440 | 0.805008 | 1.642121e-49 | -8.615850e-47 |
| Msa0557460 | Msa1392580 | 0.820761 | 5.781105e-53 | -8.615850e-47 |
| Msa0557460 | Msa1393780 | 0.805055 | 1.605678e-49 | -8.615850e-47 |
| Msa0557460 | Msa1396030 | 0.802131 | 6.489950e-49 | -8.615850e-47 |
| Msa0557460 | Msa1397400 | 0.849084 | 4.058256e-60 | -8.615850e-47 |
| Msa0557460 | Msa1397740 | 0.809939 | 1.476539e-50 | -8.615850e-47 |
| Msa0557460 | Msa1405460 | 0.832266 | 1.042425e-55 | -8.615850e-47 |
| Msa0557460 | Msa1409410 | 0.841831 | 3.743513e-58 | -8.615850e-47 |
| Msa0557460 | Msa1414640 | 0.813200 | 2.887165e-51 | -8.615850e-47 |
| Msa0557460 | Msa1415540 | 0.931860 | 2.021052e-94 | -8.615850e-47 |
| Msa0557460 | Msa1420950 | 0.830000 | 3.757218e-55 | -8.615850e-47 |
| Msa0557460 | Msa1422420 | 0.812158 | 4.879532e-51 | -8.615850e-47 |
| Msa0557460 | Msa1427100 | 0.833688 | 4.619213e-56 | -8.615850e-47 |
| Msa0557460 | Msa1432500 | 0.804591 | 2.006696e-49 | -8.615850e-47 |
| Msa0557460 | Msa1433790 | 0.816978 | 4.185296e-52 | -8.615850e-47 |
| Msa0557460 | Msa1433810 | 0.849352 | 3.417193e-60 | -8.615850e-47 |
| Msa0557460 | Msa1436420 | 0.803890 | 2.808918e-49 | -8.615850e-47 |
| Msa0557460 | Msa1437930 | 0.845655 | 3.547243e-59 | -8.615850e-47 |
| Msa0557460 | Msa1440630 | 0.877881 | 4.400956e-69 | -8.615850e-47 |
| Msa0557460 | Msa1440960 | 0.863215 | 2.917554e-64 | -8.615850e-47 |
| Msa0557460 | Msa1449480 | 0.825235 | 5.234691e-54 | -8.615850e-47 |
| Msa0557460 | Msa1450100 | 0.831099 | 2.022707e-55 | -8.615850e-47 |
| Msa0557460 | Msa1450190 | 0.814731 | 1.326689e-51 | -8.615850e-47 |
| Msa0557460 | Msa1452140 | 0.856849 | 2.435919e-62 | -8.615850e-47 |
| Msa0557460 | Msa1454140 | 0.839747 | 1.317164e-57 | -8.615850e-47 |
| Msa0557460 | Msa1457510 | 0.811421 | 7.061834e-51 | -8.615850e-47 |
| Msa0557460 | Msa1459360 | 0.801574 | 8.444699e-49 | -8.615850e-47 |
| Msa0557460 | Msa1465440 | 0.806527 | 7.877203e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0557460 | MtrunA17_Chr4g0046601 | 78.173 | 394 | 44 | 5 | 1 | 388 | 1 | 358 | 1.07e-134 | 389 |
| Msa0557460 | MtrunA17_Chr2g0282691 | 51.020 | 147 | 58 | 5 | 249 | 387 | 120 | 260 | 3.82e-16 | 77.8 |
| Msa0557460 | MtrunA17_Chr2g0282691 | 56.962 | 79 | 32 | 2 | 1 | 77 | 1 | 79 | 4.46e-15 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 52 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGAGTTATATCCTTCTTC+TGG | 0.161454 | 4_1:-55836484 | None:intergenic |
| TGTTGTTCTGGTTTGTTTAA+TGG | 0.166365 | 4_1:-55836145 | None:intergenic |
| TTCGAGTTATATACTTCTTC+TGG | 0.178488 | 4_1:-55836592 | None:intergenic |
| GACTGTCTCTGGCATGAATT+TGG | 0.206853 | 4_1:-55836063 | None:intergenic |
| ATTCGGGTACTTGTTGTTAT+AGG | 0.218132 | 4_1:-55836356 | None:intergenic |
| CTTCAAACTGCTCTTGATTC+TGG | 0.250818 | 4_1:-55837122 | None:intergenic |
| TGAGAATTGGTACAACAAAA+AGG | 0.252898 | 4_1:+55837038 | Msa0557460:CDS |
| TTTAATGGTGTTTCATTGTT+AGG | 0.261763 | 4_1:-55836130 | None:intergenic |
| AATACTTGTTGTTATTGTTC+TGG | 0.283935 | 4_1:-55836726 | None:intergenic |
| ATGAAAACTGGTTGTTGTTC+TGG | 0.303072 | 4_1:-55836157 | None:intergenic |
| CAAGTATTCTTCTAGTTCTA+AGG | 0.327940 | 4_1:+55836441 | Msa0557460:CDS |
| CAAGTATTCTTCTAGTTCTA+AGG | 0.327940 | 4_1:+55836549 | Msa0557460:CDS |
| GAAAACAGTTATGGTTTATA+TGG | 0.334786 | 4_1:+55836190 | Msa0557460:CDS |
| ATTGAGTTGTAACCTTCTTC+TGG | 0.340437 | 4_1:-55836787 | None:intergenic |
| TTCATATGATTGGAAAGTGT+TGG | 0.393181 | 4_1:-55836266 | None:intergenic |
| TCGGTTTCCGGGATGAAAAC+TGG | 0.395977 | 4_1:-55836169 | None:intergenic |
| GCTGAAGAATTGACTGTCTC+TGG | 0.398942 | 4_1:-55836074 | None:intergenic |
| TTGGTGTCACTAACTTCATT+CGG | 0.404949 | 4_1:-55836373 | None:intergenic |
| TGTTGTTATAGGAATCTTGC+TGG | 0.405186 | 4_1:-55836345 | None:intergenic |
| TCGAGTTATATCCTTCTTCT+GGG | 0.415804 | 4_1:-55836483 | None:intergenic |
| TCATATGATTGGAAAGTGTT+GGG | 0.422874 | 4_1:-55836265 | None:intergenic |
| GTTGTCGTAGTTGTTGTTGT+TGG | 0.424284 | 4_1:-55836416 | None:intergenic |
| CCGGAAACCGAAAACAGTTA+TGG | 0.426235 | 4_1:+55836181 | Msa0557460:CDS |
| TCGAGTTATATACTTCTTCT+GGG | 0.433782 | 4_1:-55836591 | None:intergenic |
| TGGTGTCACTAACTTCATTC+GGG | 0.435111 | 4_1:-55836372 | None:intergenic |
| TTGAGTTGTAACCTTCTTCT+GGG | 0.440468 | 4_1:-55836786 | None:intergenic |
| GTAAGATGTTCCCGTTAGTT+TGG | 0.449964 | 4_1:-55836392 | None:intergenic |
| AAATACAATCCGACATTCAA+TGG | 0.455546 | 4_1:+55836988 | Msa0557460:CDS |
| AACGCTAAGTTTACTGAAGA+AGG | 0.456600 | 4_1:+55836685 | Msa0557460:CDS |
| AATGAGTGACACAAGAGTTA+TGG | 0.465302 | 4_1:+55836927 | Msa0557460:CDS |
| TTCAATGGAGATTCATCTAA+AGG | 0.466676 | 4_1:+55837003 | Msa0557460:CDS |
| AACAGAAAGTTCCCAGAAGA+AGG | 0.473285 | 4_1:+55836775 | Msa0557460:CDS |
| ATGAAAAGGATGTTAAGAAT+AGG | 0.473962 | 4_1:-55836033 | None:intergenic |
| TTGTTTGTGTTAGTAGTACT+AGG | 0.484396 | 4_1:-55836235 | None:intergenic |
| GTTAGTGACACCAAACTAAC+GGG | 0.485500 | 4_1:+55836382 | Msa0557460:CDS |
| GAGTTGTGAACTCTGAGAAT+TGG | 0.491359 | 4_1:+55837025 | Msa0557460:CDS |
| ATGTTAAGAATAGGAAAGAA+AGG | 0.493863 | 4_1:-55836024 | None:intergenic |
| TTGTGTTAGTAGTACTAGGA+GGG | 0.504780 | 4_1:-55836231 | None:intergenic |
| CTTCTCTAACATTGTTGACA+TGG | 0.506391 | 4_1:-55836105 | None:intergenic |
| AATAACAAGAACTCTATGAA+TGG | 0.533344 | 4_1:+55837096 | Msa0557460:CDS |
| GGTTTATATGGTCATGACAC+TGG | 0.538424 | 4_1:+55836202 | Msa0557460:CDS |
| AATTTGGAGAGAAAATGAAA+AGG | 0.549855 | 4_1:-55836047 | None:intergenic |
| GATGAATCTCCATTGAATGT+CGG | 0.565056 | 4_1:-55836997 | None:intergenic |
| TTCTCTAACATTGTTGACAT+GGG | 0.573704 | 4_1:-55836104 | None:intergenic |
| TACAACAATGGTGAGAGGCA+AGG | 0.586180 | 4_1:+55836904 | Msa0557460:CDS |
| TGAAGAAGGATACAAATCCA+TGG | 0.589242 | 4_1:+55836699 | Msa0557460:CDS |
| TTTGTGTTAGTAGTACTAGG+AGG | 0.589979 | 4_1:-55836232 | None:intergenic |
| AGTTAGTGACACCAAACTAA+CGG | 0.603223 | 4_1:+55836381 | Msa0557460:CDS |
| AGTAACAACAATTACAACAA+TGG | 0.621284 | 4_1:+55836892 | Msa0557460:CDS |
| GACACAAGAGTTATGGAAGG+TGG | 0.628338 | 4_1:+55836934 | Msa0557460:CDS |
| ACAATTACAACAATGGTGAG+AGG | 0.652438 | 4_1:+55836899 | Msa0557460:CDS |
| AGTGACACAAGAGTTATGGA+AGG | 0.692016 | 4_1:+55836931 | Msa0557460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATAAACCATAACTGTTTT+CGG | - | chr4_1:55836191-55836210 | None:intergenic | 20.0% |
| !!! | ATATAAACCATAACTGTTTT+CGG | - | chr4_1:55836191-55836210 | None:intergenic | 20.0% |
| !!! | AAAGAAAGGAATTTTGAGAT+GGG | - | chr4_1:55836013-55836032 | None:intergenic | 25.0% |
| ! | ATGTTAAGAATAGGAAAGAA+AGG | - | chr4_1:55836027-55836046 | None:intergenic | 25.0% |
| ! | ATGAAAAGGATGTTAAGAAT+AGG | - | chr4_1:55836036-55836055 | None:intergenic | 25.0% |
| ! | AATTTGGAGAGAAAATGAAA+AGG | - | chr4_1:55836050-55836069 | None:intergenic | 25.0% |
| ! | TTTAATGGTGTTTCATTGTT+AGG | - | chr4_1:55836133-55836152 | None:intergenic | 25.0% |
| ! | GAAAACAGTTATGGTTTATA+TGG | + | chr4_1:55836190-55836209 | Msa0557460:CDS | 25.0% |
| !!! | ACGAAGTTTTTTCATATGAT+TGG | - | chr4_1:55836279-55836298 | None:intergenic | 25.0% |
| !!! | AATACTTGTTGTTATTGTTC+TGG | - | chr4_1:55836729-55836748 | None:intergenic | 25.0% |
| ! | AGTAACAACAATTACAACAA+TGG | + | chr4_1:55836892-55836911 | Msa0557460:CDS | 25.0% |
| !! | TTTTTATGATGTTAACTCTG+AGG | + | chr4_1:55836963-55836982 | Msa0557460:CDS | 25.0% |
| ! | AATAACAAGAACTCTATGAA+TGG | + | chr4_1:55837096-55837115 | Msa0557460:CDS | 25.0% |
| !!! | AAAGAAAGGAATTTTGAGAT+GGG | - | chr4_1:55836013-55836032 | None:intergenic | 25.0% |
| ! | ATGTTAAGAATAGGAAAGAA+AGG | - | chr4_1:55836027-55836046 | None:intergenic | 25.0% |
| ! | ATGAAAAGGATGTTAAGAAT+AGG | - | chr4_1:55836036-55836055 | None:intergenic | 25.0% |
| ! | AATTTGGAGAGAAAATGAAA+AGG | - | chr4_1:55836050-55836069 | None:intergenic | 25.0% |
| ! | TTTAATGGTGTTTCATTGTT+AGG | - | chr4_1:55836133-55836152 | None:intergenic | 25.0% |
| ! | GAAAACAGTTATGGTTTATA+TGG | + | chr4_1:55836190-55836209 | Msa0557460:CDS | 25.0% |
| !!! | ACGAAGTTTTTTCATATGAT+TGG | - | chr4_1:55836279-55836298 | None:intergenic | 25.0% |
| !!! | AATACTTGTTGTTATTGTTC+TGG | - | chr4_1:55836729-55836748 | None:intergenic | 25.0% |
| ! | AGTAACAACAATTACAACAA+TGG | + | chr4_1:55836892-55836911 | Msa0557460:CDS | 25.0% |
| !! | TTTTTATGATGTTAACTCTG+AGG | + | chr4_1:55836963-55836982 | Msa0557460:CDS | 25.0% |
| ! | AATAACAAGAACTCTATGAA+TGG | + | chr4_1:55837096-55837115 | Msa0557460:CDS | 25.0% |
| !! | GAAAGAAAGGAATTTTGAGA+TGG | - | chr4_1:55836014-55836033 | None:intergenic | 30.0% |
| TTCTCTAACATTGTTGACAT+GGG | - | chr4_1:55836107-55836126 | None:intergenic | 30.0% | |
| !! | TGTTGTTCTGGTTTGTTTAA+TGG | - | chr4_1:55836148-55836167 | None:intergenic | 30.0% |
| TTGTTTGTGTTAGTAGTACT+AGG | - | chr4_1:55836238-55836257 | None:intergenic | 30.0% | |
| !! | TCATATGATTGGAAAGTGTT+GGG | - | chr4_1:55836268-55836287 | None:intergenic | 30.0% |
| ! | TTCATATGATTGGAAAGTGT+TGG | - | chr4_1:55836269-55836288 | None:intergenic | 30.0% |
| !! | CAAGTATTCTTCTAGTTCTA+AGG | + | chr4_1:55836441-55836460 | Msa0557460:CDS | 30.0% |
| !! | CAAGTATTCTTCTAGTTCTA+AGG | + | chr4_1:55836441-55836460 | Msa0557460:CDS | 30.0% |
| TCGAGTTATATACTTCTTCT+GGG | - | chr4_1:55836594-55836613 | None:intergenic | 30.0% | |
| ! | TTCGAGTTATATACTTCTTC+TGG | - | chr4_1:55836595-55836614 | None:intergenic | 30.0% |
| TTTCTACAACAACAACAACA+AGG | + | chr4_1:55836651-55836670 | Msa0557460:CDS | 30.0% | |
| AAATACAATCCGACATTCAA+TGG | + | chr4_1:55836988-55837007 | Msa0557460:CDS | 30.0% | |
| TTCAATGGAGATTCATCTAA+AGG | + | chr4_1:55837003-55837022 | Msa0557460:CDS | 30.0% | |
| TGAGAATTGGTACAACAAAA+AGG | + | chr4_1:55837038-55837057 | Msa0557460:CDS | 30.0% | |
| GAGAATTGGTACAACAAAAA+GGG | + | chr4_1:55837039-55837058 | Msa0557460:CDS | 30.0% | |
| TACAACAAAAAGGGTTACTT+TGG | + | chr4_1:55837048-55837067 | Msa0557460:CDS | 30.0% | |
| !! | GAAAGAAAGGAATTTTGAGA+TGG | - | chr4_1:55836014-55836033 | None:intergenic | 30.0% |
| TTCTCTAACATTGTTGACAT+GGG | - | chr4_1:55836107-55836126 | None:intergenic | 30.0% | |
| !! | TGTTGTTCTGGTTTGTTTAA+TGG | - | chr4_1:55836148-55836167 | None:intergenic | 30.0% |
| TTGTTTGTGTTAGTAGTACT+AGG | - | chr4_1:55836238-55836257 | None:intergenic | 30.0% | |
| !! | TCATATGATTGGAAAGTGTT+GGG | - | chr4_1:55836268-55836287 | None:intergenic | 30.0% |
| ! | TTCATATGATTGGAAAGTGT+TGG | - | chr4_1:55836269-55836288 | None:intergenic | 30.0% |
| !! | CAAGTATTCTTCTAGTTCTA+AGG | + | chr4_1:55836441-55836460 | Msa0557460:CDS | 30.0% |
| !! | CAAGTATTCTTCTAGTTCTA+AGG | + | chr4_1:55836441-55836460 | Msa0557460:CDS | 30.0% |
| TCGAGTTATATACTTCTTCT+GGG | - | chr4_1:55836594-55836613 | None:intergenic | 30.0% | |
| ! | TTCGAGTTATATACTTCTTC+TGG | - | chr4_1:55836595-55836614 | None:intergenic | 30.0% |
| TTTCTACAACAACAACAACA+AGG | + | chr4_1:55836651-55836670 | Msa0557460:CDS | 30.0% | |
| AAATACAATCCGACATTCAA+TGG | + | chr4_1:55836988-55837007 | Msa0557460:CDS | 30.0% | |
| TTCAATGGAGATTCATCTAA+AGG | + | chr4_1:55837003-55837022 | Msa0557460:CDS | 30.0% | |
| TGAGAATTGGTACAACAAAA+AGG | + | chr4_1:55837038-55837057 | Msa0557460:CDS | 30.0% | |
| GAGAATTGGTACAACAAAAA+GGG | + | chr4_1:55837039-55837058 | Msa0557460:CDS | 30.0% | |
| TACAACAAAAAGGGTTACTT+TGG | + | chr4_1:55837048-55837067 | Msa0557460:CDS | 30.0% | |
| CTTCTCTAACATTGTTGACA+TGG | - | chr4_1:55836108-55836127 | None:intergenic | 35.0% | |
| ! | ATGAAAACTGGTTGTTGTTC+TGG | - | chr4_1:55836160-55836179 | None:intergenic | 35.0% |
| TTGTGTTAGTAGTACTAGGA+GGG | - | chr4_1:55836234-55836253 | None:intergenic | 35.0% | |
| TTTGTGTTAGTAGTACTAGG+AGG | - | chr4_1:55836235-55836254 | None:intergenic | 35.0% | |
| TGTTGTTATAGGAATCTTGC+TGG | - | chr4_1:55836348-55836367 | None:intergenic | 35.0% | |
| !! | ATTCGGGTACTTGTTGTTAT+AGG | - | chr4_1:55836359-55836378 | None:intergenic | 35.0% |
| !! | TTGGTGTCACTAACTTCATT+CGG | - | chr4_1:55836376-55836395 | None:intergenic | 35.0% |
| AGTTAGTGACACCAAACTAA+CGG | + | chr4_1:55836381-55836400 | Msa0557460:CDS | 35.0% | |
| AACAAAAAGTTCCCAGAAGA+AGG | + | chr4_1:55836472-55836491 | Msa0557460:CDS | 35.0% | |
| TCGAGTTATATCCTTCTTCT+GGG | - | chr4_1:55836486-55836505 | None:intergenic | 35.0% | |
| ! | TTCGAGTTATATCCTTCTTC+TGG | - | chr4_1:55836487-55836506 | None:intergenic | 35.0% |
| AACGCTAAGTTTACTGAAGA+AGG | + | chr4_1:55836685-55836704 | Msa0557460:CDS | 35.0% | |
| TGAAGAAGGATACAAATCCA+TGG | + | chr4_1:55836699-55836718 | Msa0557460:CDS | 35.0% | |
| !!! | GTTATTGTTCTGGTTTTCCA+TGG | - | chr4_1:55836719-55836738 | None:intergenic | 35.0% |
| ! | TTGAGTTGTAACCTTCTTCT+GGG | - | chr4_1:55836789-55836808 | None:intergenic | 35.0% |
| ! | ATTGAGTTGTAACCTTCTTC+TGG | - | chr4_1:55836790-55836809 | None:intergenic | 35.0% |
| ACAATTACAACAATGGTGAG+AGG | + | chr4_1:55836899-55836918 | Msa0557460:CDS | 35.0% | |
| AATGAGTGACACAAGAGTTA+TGG | + | chr4_1:55836927-55836946 | Msa0557460:CDS | 35.0% | |
| GATGAATCTCCATTGAATGT+CGG | - | chr4_1:55837000-55837019 | None:intergenic | 35.0% | |
| CTTCTCTAACATTGTTGACA+TGG | - | chr4_1:55836108-55836127 | None:intergenic | 35.0% | |
| ! | ATGAAAACTGGTTGTTGTTC+TGG | - | chr4_1:55836160-55836179 | None:intergenic | 35.0% |
| TTGTGTTAGTAGTACTAGGA+GGG | - | chr4_1:55836234-55836253 | None:intergenic | 35.0% | |
| TTTGTGTTAGTAGTACTAGG+AGG | - | chr4_1:55836235-55836254 | None:intergenic | 35.0% | |
| TGTTGTTATAGGAATCTTGC+TGG | - | chr4_1:55836348-55836367 | None:intergenic | 35.0% | |
| !! | ATTCGGGTACTTGTTGTTAT+AGG | - | chr4_1:55836359-55836378 | None:intergenic | 35.0% |
| !! | TTGGTGTCACTAACTTCATT+CGG | - | chr4_1:55836376-55836395 | None:intergenic | 35.0% |
| AGTTAGTGACACCAAACTAA+CGG | + | chr4_1:55836381-55836400 | Msa0557460:CDS | 35.0% | |
| AACAAAAAGTTCCCAGAAGA+AGG | + | chr4_1:55836472-55836491 | Msa0557460:CDS | 35.0% | |
| TCGAGTTATATCCTTCTTCT+GGG | - | chr4_1:55836486-55836505 | None:intergenic | 35.0% | |
| ! | TTCGAGTTATATCCTTCTTC+TGG | - | chr4_1:55836487-55836506 | None:intergenic | 35.0% |
| AACGCTAAGTTTACTGAAGA+AGG | + | chr4_1:55836685-55836704 | Msa0557460:CDS | 35.0% | |
| TGAAGAAGGATACAAATCCA+TGG | + | chr4_1:55836699-55836718 | Msa0557460:CDS | 35.0% | |
| !!! | GTTATTGTTCTGGTTTTCCA+TGG | - | chr4_1:55836719-55836738 | None:intergenic | 35.0% |
| ! | TTGAGTTGTAACCTTCTTCT+GGG | - | chr4_1:55836789-55836808 | None:intergenic | 35.0% |
| ! | ATTGAGTTGTAACCTTCTTC+TGG | - | chr4_1:55836790-55836809 | None:intergenic | 35.0% |
| ACAATTACAACAATGGTGAG+AGG | + | chr4_1:55836899-55836918 | Msa0557460:CDS | 35.0% | |
| AATGAGTGACACAAGAGTTA+TGG | + | chr4_1:55836927-55836946 | Msa0557460:CDS | 35.0% | |
| GATGAATCTCCATTGAATGT+CGG | - | chr4_1:55837000-55837019 | None:intergenic | 35.0% | |
| ! | ACAACAACCAGTTTTCATCC+CGG | + | chr4_1:55836162-55836181 | Msa0557460:CDS | 40.0% |
| ! | CATAACTGTTTTCGGTTTCC+GGG | - | chr4_1:55836183-55836202 | None:intergenic | 40.0% |
| ! | CCATAACTGTTTTCGGTTTC+CGG | - | chr4_1:55836184-55836203 | None:intergenic | 40.0% |
| GGTTTATATGGTCATGACAC+TGG | + | chr4_1:55836202-55836221 | Msa0557460:CDS | 40.0% | |
| !! | TGGTGTCACTAACTTCATTC+GGG | - | chr4_1:55836375-55836394 | None:intergenic | 40.0% |
| GTTAGTGACACCAAACTAAC+GGG | + | chr4_1:55836382-55836401 | Msa0557460:CDS | 40.0% | |
| GTAAGATGTTCCCGTTAGTT+TGG | - | chr4_1:55836395-55836414 | None:intergenic | 40.0% | |
| ! | GTTGTCGTAGTTGTTGTTGT+TGG | - | chr4_1:55836419-55836438 | None:intergenic | 40.0% |
| AACAGAAAGTTCCCAGAAGA+AGG | + | chr4_1:55836775-55836794 | Msa0557460:CDS | 40.0% | |
| ! | CGTAGTTGTTGTTGTTGTTC+TGG | - | chr4_1:55836819-55836838 | None:intergenic | 40.0% |
| AGTGACACAAGAGTTATGGA+AGG | + | chr4_1:55836931-55836950 | Msa0557460:CDS | 40.0% | |
| ! | GAGTTGTGAACTCTGAGAAT+TGG | + | chr4_1:55837025-55837044 | Msa0557460:CDS | 40.0% |
| CTTCAAACTGCTCTTGATTC+TGG | - | chr4_1:55837125-55837144 | None:intergenic | 40.0% | |
| ! | ACAACAACCAGTTTTCATCC+CGG | + | chr4_1:55836162-55836181 | Msa0557460:CDS | 40.0% |
| ! | CATAACTGTTTTCGGTTTCC+GGG | - | chr4_1:55836183-55836202 | None:intergenic | 40.0% |
| ! | CCATAACTGTTTTCGGTTTC+CGG | - | chr4_1:55836184-55836203 | None:intergenic | 40.0% |
| GGTTTATATGGTCATGACAC+TGG | + | chr4_1:55836202-55836221 | Msa0557460:CDS | 40.0% | |
| !! | TGGTGTCACTAACTTCATTC+GGG | - | chr4_1:55836375-55836394 | None:intergenic | 40.0% |
| GTTAGTGACACCAAACTAAC+GGG | + | chr4_1:55836382-55836401 | Msa0557460:CDS | 40.0% | |
| GTAAGATGTTCCCGTTAGTT+TGG | - | chr4_1:55836395-55836414 | None:intergenic | 40.0% | |
| ! | GTTGTCGTAGTTGTTGTTGT+TGG | - | chr4_1:55836419-55836438 | None:intergenic | 40.0% |
| AACAGAAAGTTCCCAGAAGA+AGG | + | chr4_1:55836775-55836794 | Msa0557460:CDS | 40.0% | |
| ! | CGTAGTTGTTGTTGTTGTTC+TGG | - | chr4_1:55836819-55836838 | None:intergenic | 40.0% |
| AGTGACACAAGAGTTATGGA+AGG | + | chr4_1:55836931-55836950 | Msa0557460:CDS | 40.0% | |
| ! | GAGTTGTGAACTCTGAGAAT+TGG | + | chr4_1:55837025-55837044 | Msa0557460:CDS | 40.0% |
| CTTCAAACTGCTCTTGATTC+TGG | - | chr4_1:55837125-55837144 | None:intergenic | 40.0% | |
| GACTGTCTCTGGCATGAATT+TGG | - | chr4_1:55836066-55836085 | None:intergenic | 45.0% | |
| GCTGAAGAATTGACTGTCTC+TGG | - | chr4_1:55836077-55836096 | None:intergenic | 45.0% | |
| CCGGAAACCGAAAACAGTTA+TGG | + | chr4_1:55836181-55836200 | Msa0557460:CDS | 45.0% | |
| TACAACAATGGTGAGAGGCA+AGG | + | chr4_1:55836904-55836923 | Msa0557460:CDS | 45.0% | |
| GACACAAGAGTTATGGAAGG+TGG | + | chr4_1:55836934-55836953 | Msa0557460:CDS | 45.0% | |
| GACTGTCTCTGGCATGAATT+TGG | - | chr4_1:55836066-55836085 | None:intergenic | 45.0% | |
| GCTGAAGAATTGACTGTCTC+TGG | - | chr4_1:55836077-55836096 | None:intergenic | 45.0% | |
| CCGGAAACCGAAAACAGTTA+TGG | + | chr4_1:55836181-55836200 | Msa0557460:CDS | 45.0% | |
| TACAACAATGGTGAGAGGCA+AGG | + | chr4_1:55836904-55836923 | Msa0557460:CDS | 45.0% | |
| GACACAAGAGTTATGGAAGG+TGG | + | chr4_1:55836934-55836953 | Msa0557460:CDS | 45.0% | |
| TCGGTTTCCGGGATGAAAAC+TGG | - | chr4_1:55836172-55836191 | None:intergenic | 50.0% | |
| TCGGTTTCCGGGATGAAAAC+TGG | - | chr4_1:55836172-55836191 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 55836004 | 55837170 | 55836004 | ID=Msa0557460;Name=Msa0557460 |
| chr4_1 | mRNA | 55836004 | 55837170 | 55836004 | ID=Msa0557460-mRNA-1;Parent=Msa0557460;Name=Msa0557460-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|388 |
| chr4_1 | exon | 55836004 | 55837170 | 55836004 | ID=Msa0557460-mRNA-1:exon:16690;Parent=Msa0557460-mRNA-1 |
| chr4_1 | CDS | 55836004 | 55837170 | 55836004 | ID=Msa0557460-mRNA-1:cds;Parent=Msa0557460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
