AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0444210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0444210 MtrunA17_Chr3g0083921 98.450 129 2 0 1 129 1 129 6.44e-91 266
Msa0444210 MtrunA17_Chr8g0352591 70.543 129 38 0 1 129 1 129 1.37e-63 196
Msa0444210 MtrunA17_Chr3g0083901 67.442 129 42 0 1 129 1 129 2.44e-61 190
Msa0444210 MtrunA17_Chr8g0352621 65.891 129 43 1 1 129 1 128 3.19e-61 190
Msa0444210 MtrunA17_Chr8g0352611 68.217 129 40 1 1 129 1 128 4.17e-60 187
Msa0444210 MtrunA17_Chr2g0293441 53.488 129 60 0 1 129 1 129 2.06e-46 152
Msa0444210 MtrunA17_Chr3g0084011 94.521 73 4 0 1 73 1 73 4.83e-46 145
Msa0444210 MtrunA17_Chr8g0382281 50.000 130 64 1 1 129 1 130 2.93e-37 129
Msa0444210 MtrunA17_Chr5g0425971 48.462 130 66 1 1 129 1 130 2.42e-36 126
Msa0444210 MtrunA17_Chr8g0352571 46.212 132 67 2 1 128 1 132 2.51e-31 113
Msa0444210 MtrunA17_Chr8g0393281 44.186 129 70 2 1 128 1 128 1.09e-30 111
Msa0444210 MtrunA17_Chr6g0479421 42.636 129 72 2 1 128 1 128 4.56e-26 99.8
Msa0444210 MtrunA17_Chr1g0162071 37.209 129 80 1 1 128 1 129 4.51e-25 97.1
Msa0444210 MtrunA17_Chr6g0479411 38.931 131 78 2 1 130 28 157 7.02e-24 94.4
Msa0444210 MtrunA17_Chr6g0479391 40.870 115 67 1 14 128 15 128 2.00e-22 90.1
Msa0444210 MtrunA17_Chr1g0210981 38.760 129 77 2 1 128 1 128 3.54e-22 89.4
Msa0444210 MtrunA17_Chr8g0352581 33.333 126 72 2 14 128 5 129 9.33e-17 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0444210 AT5G12380.1 56.589 129 56 0 1 129 1 129 3.04e-48 157
Msa0444210 AT1G35720.1 50.769 130 63 1 1 129 1 130 4.04e-39 134
Msa0444210 AT5G10230.1 53.846 130 59 1 1 129 1 130 6.06e-39 133
Msa0444210 AT5G10220.1 51.538 130 62 1 1 129 1 130 5.49e-38 131
Msa0444210 AT5G65020.1 50.769 130 63 1 1 129 1 130 3.49e-36 126
Msa0444210 AT2G38760.1 46.269 134 66 2 1 128 1 134 5.00e-36 126
Msa0444210 AT5G65020.2 50.476 105 52 0 25 129 11 115 3.90e-29 107
Msa0444210 AT1G68090.2 41.085 129 75 1 1 128 1 129 3.74e-25 96.3
Msa0444210 AT1G68090.1 41.085 129 75 1 1 128 1 129 9.68e-25 96.7
Msa0444210 AT2G38750.1 32.824 131 72 4 12 128 4 132 3.30e-14 68.2
Msa0444210 AT2G38750.2 33.043 115 65 2 25 128 2 115 6.13e-14 67.0

Find 25 sgRNAs with CRISPR-Local

Find 567 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTCTTGAGTCTGAGCTTTC+AGG 0.157675 3_3:+17103507 Msa0444210:CDS
ATGACCTAATATTGCTATAA+TGG 0.265808 3_3:-17103415 None:intergenic
CTTGTCTGATTTGAGTCCTT+TGG 0.274325 3_3:-17103449 None:intergenic
AGTGGTTGGAAGGAGCAATA+AGG 0.292571 3_3:-17102643 None:intergenic
AAAGCCATTATAGCAATATT+AGG 0.311002 3_3:+17103411 Msa0444210:CDS
GCTCTTCAAAGGGCTGTTAA+AGG 0.314120 3_3:+17102686 Msa0444210:CDS
GTGTAGTTCTTGGCGGAAAA+TGG 0.334728 3_3:+17111531 Msa0444210:intron
AGCAATGTATAGATGGATAT+TGG 0.374279 3_3:+17109100 Msa0444210:CDS
TTGTCTGATTTGAGTCCTTT+GGG 0.385685 3_3:-17103448 None:intergenic
GTGGTTGGAAGGAGCAATAA+GGG 0.389381 3_3:-17102642 None:intergenic
AGCAGAACGTGAAGCTTTGT+TGG 0.406487 3_3:+17109127 Msa0444210:CDS
AGAGCTTCTGCATCTTCAAC+TGG 0.416203 3_3:-17102668 None:intergenic
CTCAAATTGAAAAGTTCATC+AGG 0.424291 3_3:-17109218 None:intergenic
TACAGAGAGCAATGTATAGA+TGG 0.433157 3_3:+17109093 Msa0444210:intron
AACAAAGCTTCACGTTCTGC+TGG 0.445499 3_3:-17109125 None:intergenic
TTAACTTGTGTAGTTCTTGG+CGG 0.504145 3_3:+17111524 Msa0444210:intron
CTGCATCTTCAACTGGAGAG+TGG 0.522358 3_3:-17102661 None:intergenic
AAGATGCAGAAGCTCTTCAA+AGG 0.524239 3_3:+17102675 Msa0444210:CDS
ATCTTCAACTGGAGAGTGGT+TGG 0.525012 3_3:-17102657 None:intergenic
CATAAACTATCATGTGATTG+TGG 0.538495 3_3:+17109175 Msa0444210:CDS
AGGAGCAATAAGGGAAGCCA+TGG 0.568515 3_3:-17102633 None:intergenic
TCAACTGGAGAGTGGTTGGA+AGG 0.576644 3_3:-17102653 None:intergenic
AGATGCAGAAGCTCTTCAAA+GGG 0.589809 3_3:+17102676 Msa0444210:CDS
ATACTATGAACTCTATCAAG+AGG 0.590523 3_3:+17103473 Msa0444210:CDS
GTCATAGAAATGCTACCCAA+AGG 0.630775 3_3:+17103433 Msa0444210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATTATTAATTAAAATTT+GGG - chr3_3:17102847-17102866 None:intergenic 0.0%
!! ATTAATTATTAATTAAAATT+TGG - chr3_3:17102848-17102867 None:intergenic 0.0%
!! TAATTAATAATAATTAATTA+AGG + chr3_3:17102860-17102879 Msa0444210:intron 0.0%
!! CATTATTATAAAAACATTTA+AGG - chr3_3:17109737-17109756 None:intergenic 10.0%
!! ATTTCATAAAAATAATGAAA+TGG + chr3_3:17110481-17110500 Msa0444210:intron 10.0%
!!! ATTTTGTAAAAATAATGAAA+AGG - chr3_3:17111197-17111216 None:intergenic 10.0%
!! TTGAAATTGATTAAATTACT+GGG + chr3_3:17103355-17103374 Msa0444210:intron 15.0%
!!! ATTTGTTTTTTTGTTAAGTA+TGG + chr3_3:17103645-17103664 Msa0444210:intron 15.0%
!!! ATCAACAAAAGTTAATTTTT+CGG + chr3_3:17103818-17103837 Msa0444210:intron 15.0%
!!! AAAAAAATTGATAACCAAAT+TGG + chr3_3:17103842-17103861 Msa0444210:intron 15.0%
!!! ATATTTTCAGTTTCATAATA+TGG + chr3_3:17104182-17104201 Msa0444210:intron 15.0%
!! ATTATTATGAGAAACATAAT+TGG - chr3_3:17107235-17107254 None:intergenic 15.0%
!! AAAGAATATTCATTCAAATA+GGG + chr3_3:17108917-17108936 Msa0444210:intron 15.0%
!! ATATCTCTTATGAATAAAAT+CGG - chr3_3:17109450-17109469 None:intergenic 15.0%
!! ATAAAAACATTTAAGGATAT+TGG - chr3_3:17109730-17109749 None:intergenic 15.0%
!! TAATTATTCAAAAAAACCAA+TGG - chr3_3:17110004-17110023 None:intergenic 15.0%
!!! ATTAATTACTTTTTAGCAAA+TGG - chr3_3:17110693-17110712 None:intergenic 15.0%
!!! ATTTATAACTTTTTAGCAAA+TGG + chr3_3:17110953-17110972 Msa0444210:intron 15.0%
!!! TTTATAATTTGCCAAATATA+TGG + chr3_3:17111323-17111342 Msa0444210:intron 15.0%
!! CTTGAAATTGATTAAATTAC+TGG + chr3_3:17103354-17103373 Msa0444210:intron 20.0%
!! TTATAATGAATAAACGTGTT+CGG + chr3_3:17103684-17103703 Msa0444210:intron 20.0%
!! ACATTAATATATGCAAAGAT+CGG - chr3_3:17103718-17103737 None:intergenic 20.0%
!!! AATCAATTTCTAAAACCTAA+AGG + chr3_3:17103896-17103915 Msa0444210:intron 20.0%
!! CTATTATTATGATTGATCAA+TGG - chr3_3:17104158-17104177 None:intergenic 20.0%
!!! ACTTTTGTAAGATAAAATTG+AGG - chr3_3:17105783-17105802 None:intergenic 20.0%
!! ATTTGAAAGAAGAAGAATAT+AGG - chr3_3:17105806-17105825 None:intergenic 20.0%
!! CTTATTATCAGAAACAATAT+TGG - chr3_3:17106135-17106154 None:intergenic 20.0%
!! AAGTTTAGATTGATACAAAA+GGG - chr3_3:17106582-17106601 None:intergenic 20.0%
!! TTATGATGAAGAATATAGTA+TGG - chr3_3:17106689-17106708 None:intergenic 20.0%
!! AAATTGCTTAAATCATTGTA+TGG + chr3_3:17107728-17107747 Msa0444210:intron 20.0%
!! CTATTATTATGATTGATCAA+TGG - chr3_3:17104158-17104177 None:intergenic 20.0%
!! GAATGAATATTCTTTCATAT+TGG - chr3_3:17108912-17108931 None:intergenic 20.0%
!! GAAAGAATATTCATTCAAAT+AGG + chr3_3:17108916-17108935 Msa0444210:intron 20.0%
!!! TTTTTTTTTGAGAATGTCAT+TGG - chr3_3:17108983-17109002 None:intergenic 20.0%
!!! TTAAAAAAGCAAAGTTTTCA+TGG - chr3_3:17109046-17109065 None:intergenic 20.0%
!!! CTTTTATAAATAAGATCAGA+GGG - chr3_3:17109339-17109358 None:intergenic 20.0%
!!! TCTTTTATAAATAAGATCAG+AGG - chr3_3:17109340-17109359 None:intergenic 20.0%
!! TTCAATAAGATTATCAACTT+TGG - chr3_3:17110071-17110090 None:intergenic 20.0%
!!! GTTTTATAATTTGCCAAATA+TGG - chr3_3:17111321-17111340 None:intergenic 20.0%
!! AAGATTGTATTCCATATAAA+AGG - chr3_3:17110408-17110427 None:intergenic 20.0%
!!! AACAATTATGTCAATTTTGT+TGG - chr3_3:17110826-17110845 None:intergenic 20.0%
!! AACAAAATTGACATAATTGT+TGG + chr3_3:17110825-17110844 Msa0444210:intron 20.0%
!! TAATGAAAAGGTTTATGAAA+AGG - chr3_3:17111185-17111204 None:intergenic 20.0%
!! ATGATTGTATTCCATATAAA+AGG + chr3_3:17111269-17111288 Msa0444210:intron 20.0%
!! TTGTAACCAAAAAAAACAAA+AGG + chr3_3:17111379-17111398 Msa0444210:intron 20.0%
!!! TCATAGAATTTTGTCTAATT+TGG - chr3_3:17111463-17111482 None:intergenic 20.0%
!!! ATTCTATGAAAGTACAAAAA+AGG + chr3_3:17111474-17111493 Msa0444210:intron 20.0%
!! AAGTTAATGTCTCAAAAATT+CGG - chr3_3:17111511-17111530 None:intergenic 20.0%
! AAGAAATGAAAAGATGGATA+TGG - chr3_3:17102721-17102740 None:intergenic 25.0%
! TCAAAGAAGAAATGAAAAGA+TGG - chr3_3:17102727-17102746 None:intergenic 25.0%
! TATTCTTATGTGTGAATGAA+AGG - chr3_3:17102795-17102814 None:intergenic 25.0%
! TGTTGTTCTTAGTTAAAAGT+TGG + chr3_3:17102936-17102955 Msa0444210:intron 25.0%
! ACAACAATACGTTAGAAAAA+TGG - chr3_3:17103146-17103165 None:intergenic 25.0%
! TTATAATCGGTGAGTTTATA+TGG + chr3_3:17103289-17103308 Msa0444210:intron 25.0%
! TATAATCGGTGAGTTTATAT+GGG + chr3_3:17103290-17103309 Msa0444210:intron 25.0%
! AAAGCCATTATAGCAATATT+AGG + chr3_3:17103411-17103430 Msa0444210:CDS 25.0%
! ATGACCTAATATTGCTATAA+TGG - chr3_3:17103418-17103437 None:intergenic 25.0%
!!! TGTCATTTTTTTTTTTACCG+TGG - chr3_3:17103549-17103568 None:intergenic 25.0%
! ACAAACTGATCTCTTAAAAT+CGG + chr3_3:17103919-17103938 Msa0444210:intron 25.0%
! TTTAAACTCAACGTGATAAT+CGG + chr3_3:17103982-17104001 Msa0444210:intron 25.0%
! AATGCAAATTCTATCAACTT+TGG - chr3_3:17104845-17104864 None:intergenic 25.0%
! GAAATAATCCAATACAGATT+TGG - chr3_3:17104908-17104927 None:intergenic 25.0%
!! TCTTCAACTCTATAAGATTT+TGG - chr3_3:17105027-17105046 None:intergenic 25.0%
!! TCTTAATGAACAATTTTCAG+TGG + chr3_3:17105071-17105090 Msa0444210:intron 25.0%
!! TAAGACTCAAGTTCTTTTAA+TGG + chr3_3:17105095-17105114 Msa0444210:intron 25.0%
!!! ATTGAACAAGGTTTTTTCAT+TGG + chr3_3:17105131-17105150 Msa0444210:intron 25.0%
! GAATTCGATTTATTCACATT+GGG - chr3_3:17105354-17105373 None:intergenic 25.0%
! TGAATTCGATTTATTCACAT+TGG - chr3_3:17105355-17105374 None:intergenic 25.0%
! TGTGAATAAATCGAATTCAT+AGG + chr3_3:17105356-17105375 Msa0444210:intron 25.0%
! AACTAGTTGACACTTTATTA+GGG - chr3_3:17105986-17106005 None:intergenic 25.0%
! AAACTAGTTGACACTTTATT+AGG - chr3_3:17105987-17106006 None:intergenic 25.0%
! TTATTCCAAATAAAGCCATT+TGG + chr3_3:17106051-17106070 Msa0444210:intron 25.0%
!! AAAAGGTAAATGCTTTTGTT+TGG - chr3_3:17106186-17106205 None:intergenic 25.0%
! TGTCAAATCCTTCATTAAAA+TGG + chr3_3:17106379-17106398 Msa0444210:intron 25.0%
!!! ATCAGCATATTTTGAATGTT+GGG + chr3_3:17106552-17106571 Msa0444210:intron 25.0%
! GAAGTTTAGATTGATACAAA+AGG - chr3_3:17106583-17106602 None:intergenic 25.0%
!! ATTGATACTTTCAAAGTGTT+TGG + chr3_3:17106719-17106738 Msa0444210:intron 25.0%
! GAGAAACATAATTGGAAATA+GGG - chr3_3:17107227-17107246 None:intergenic 25.0%
! TGAGAAACATAATTGGAAAT+AGG - chr3_3:17107228-17107247 None:intergenic 25.0%
! AGTATGTGTCAAAATAATCA+AGG - chr3_3:17107535-17107554 None:intergenic 25.0%
! CATTAGCATCTATACATAAT+TGG + chr3_3:17107594-17107613 Msa0444210:intron 25.0%
!! AAGCATTGTTAACATCTAAT+TGG - chr3_3:17107628-17107647 None:intergenic 25.0%
! TTCTTTCAAGATCAAAGATT+TGG + chr3_3:17107955-17107974 Msa0444210:intron 25.0%
! TCTTTCAAGATCAAAGATTT+GGG + chr3_3:17107956-17107975 Msa0444210:intron 25.0%
! AAATCCTTGTAAATGAAGAT+AGG - chr3_3:17108352-17108371 None:intergenic 25.0%
!!! TAATAGTGAATTTGACTTGT+TGG + chr3_3:17109066-17109085 Msa0444210:intron 25.0%
!! GATGTATCTAGTTCAAATAT+TGG + chr3_3:17109380-17109399 Msa0444210:intron 25.0%
!!! CGGTTTTATAAAAGACATTT+GGG - chr3_3:17109430-17109449 None:intergenic 25.0%
!!! TCGGTTTTATAAAAGACATT+TGG - chr3_3:17109431-17109450 None:intergenic 25.0%
! GAGATATTTGTGTTCATAAA+AGG + chr3_3:17109463-17109482 Msa0444210:intron 25.0%
!!! AAAGGTGTTGTGATTATTTT+TGG + chr3_3:17109481-17109500 Msa0444210:intron 25.0%
! TAATCAGAATTCTTACAACA+AGG + chr3_3:17109633-17109652 Msa0444210:intron 25.0%
! AGTTAGAGATTTCTCTTATT+TGG + chr3_3:17109869-17109888 Msa0444210:intron 25.0%
!! TTTCTGTTTTCTCTTCAAAA+GGG + chr3_3:17109941-17109960 Msa0444210:intron 25.0%
!! ATTCTATGAAAGTACGAAAA+GGG - chr3_3:17110236-17110255 None:intergenic 25.0%
!! AATTCTATGAAAGTACGAAA+AGG - chr3_3:17110237-17110256 None:intergenic 25.0%
!! TCATAGAATTTTACCTAACT+TGG + chr3_3:17110247-17110266 Msa0444210:intron 25.0%
! AACAAAACTGACAAAACTAA+AGG + chr3_3:17110302-17110321 Msa0444210:intron 25.0%
!! TTTAGCAACAACCTTTTATA+TGG + chr3_3:17110394-17110413 Msa0444210:intron 25.0%
!! TTTAGCAACAACCTTTTATA+TGG - chr3_3:17110394-17110413 None:intergenic 25.0%
! TTGCTAAATCTGAGAAAAAA+TGG + chr3_3:17111295-17111314 Msa0444210:intron 25.0%
! TAAATCTGAGAAAAAATGGA+GGG + chr3_3:17111299-17111318 Msa0444210:intron 25.0%
! TGGTTCTTTAACCATATATT+TGG - chr3_3:17111337-17111356 None:intergenic 25.0%
!!! GTTATGCCTTTTGTTTTTTT+TGG - chr3_3:17111388-17111407 None:intergenic 25.0%
!! GGTTTGATGAATTTTCAAGA+TGG - chr3_3:17102774-17102793 None:intergenic 30.0%
AATATTGGCACAAGGAAAAA+GGG - chr3_3:17103110-17103129 None:intergenic 30.0%
ACGATTCCATGTGTTATAAT+CGG + chr3_3:17103276-17103295 Msa0444210:intron 30.0%
ATACTATGAACTCTATCAAG+AGG + chr3_3:17103473-17103492 Msa0444210:CDS 30.0%
!! TGAGTTTAGCTCAACTTTTA+CGG - chr3_3:17103741-17103760 None:intergenic 30.0%
AAACACTAAAGCCTATTACT+TGG - chr3_3:17104059-17104078 None:intergenic 30.0%
ATGAGTACCATAACATACTA+TGG - chr3_3:17104109-17104128 None:intergenic 30.0%
ATGATTGATCAATGGTTACA+AGG - chr3_3:17104150-17104169 None:intergenic 30.0%
TCAACAAAGTTTCATCTACA+AGG - chr3_3:17104267-17104286 None:intergenic 30.0%
CTTCTTCAATTTCTTTACCA+TGG + chr3_3:17104474-17104493 Msa0444210:intron 30.0%
TAGTTGGAACCATTGAATTT+GGG - chr3_3:17104589-17104608 None:intergenic 30.0%
GTAATTATCTTGTTCATTCC+TGG + chr3_3:17104728-17104747 Msa0444210:intron 30.0%
! ATGATAATGCCTTTGATGTA+TGG + chr3_3:17104797-17104816 Msa0444210:intron 30.0%
! TGATAATGCCTTTGATGTAT+GGG + chr3_3:17104798-17104817 Msa0444210:intron 30.0%
TAAATCTTCCCATACATCAA+AGG - chr3_3:17104809-17104828 None:intergenic 30.0%
CAGTGAGAAACTGAATAATA+TGG - chr3_3:17105050-17105069 None:intergenic 30.0%
CATATTATTCAGTTTCTCAC+TGG + chr3_3:17105048-17105067 Msa0444210:intron 30.0%
GAAAAAACCTTGTTCAATGT+GGG - chr3_3:17105129-17105148 None:intergenic 30.0%
TGAAAAAACCTTGTTCAATG+TGG - chr3_3:17105130-17105149 None:intergenic 30.0%
GATTACTGTTATTAGAAGCA+TGG + chr3_3:17105324-17105343 Msa0444210:intron 30.0%
ATTTGAAGAAGAACAAGTAG+TGG - chr3_3:17105610-17105629 None:intergenic 30.0%
GTTCTTCTTCAAATTCCTAT+TGG + chr3_3:17105616-17105635 Msa0444210:intron 30.0%
! TCCTATTGGTTAGTTGATTA+TGG + chr3_3:17105630-17105649 Msa0444210:intron 30.0%
ACCATAATCAACTAACCAAT+AGG - chr3_3:17105634-17105653 None:intergenic 30.0%
AAACTTTGTGAACAGACATA+AGG - chr3_3:17105833-17105852 None:intergenic 30.0%
ACTAGTTGACACTTTATTAG+GGG - chr3_3:17105985-17106004 None:intergenic 30.0%
! TGTGAAGTACTAAGAGAAAA+AGG - chr3_3:17106203-17106222 None:intergenic 30.0%
AACTCTTACATCTTGACATT+TGG + chr3_3:17106240-17106259 Msa0444210:intron 30.0%
ACTCTTACATCTTGACATTT+GGG + chr3_3:17106241-17106260 Msa0444210:intron 30.0%
AATGAAGGATTTGACATGAT+GGG - chr3_3:17106375-17106394 None:intergenic 30.0%
TAATGAAGGATTTGACATGA+TGG - chr3_3:17106376-17106395 None:intergenic 30.0%
!! GGTTTGAACCATTTTAATGA+AGG - chr3_3:17106390-17106409 None:intergenic 30.0%
TTATCAGATCTGATGCATTT+GGG - chr3_3:17106428-17106447 None:intergenic 30.0%
ATTATCAGATCTGATGCATT+TGG - chr3_3:17106429-17106448 None:intergenic 30.0%
AAATGCATCAGATCTGATAA+TGG + chr3_3:17106428-17106447 Msa0444210:intron 30.0%
ATTCATAAAAGGTTGGAATG+AGG - chr3_3:17106463-17106482 None:intergenic 30.0%
AATGCCAAGAGATTCATAAA+AGG - chr3_3:17106474-17106493 None:intergenic 30.0%
! TTCAACTCTACCATTTTGTT+GGG - chr3_3:17106525-17106544 None:intergenic 30.0%
! TTTCAACTCTACCATTTTGT+TGG - chr3_3:17106526-17106545 None:intergenic 30.0%
!! CATCAGCATATTTTGAATGT+TGG + chr3_3:17106551-17106570 Msa0444210:intron 30.0%
GAGTAGGTATTCTATTTATG+AGG - chr3_3:17106646-17106665 None:intergenic 30.0%
!! CTTTGAAAGTATCAATGTCA+GGG - chr3_3:17106715-17106734 None:intergenic 30.0%
!! ACTTTGAAAGTATCAATGTC+AGG - chr3_3:17106716-17106735 None:intergenic 30.0%
! AAAACAGTTTTTCTTGCTCT+AGG - chr3_3:17106794-17106813 None:intergenic 30.0%
! AGCAAGAAAAACTGTTTTCT+TGG + chr3_3:17106796-17106815 Msa0444210:intron 30.0%
! GCAAGAAAAACTGTTTTCTT+GGG + chr3_3:17106797-17106816 Msa0444210:intron 30.0%
CCTAGAAACAAATATTTCTC+TGG - chr3_3:17106867-17106886 None:intergenic 30.0%
! CCAGAGAAATATTTGTTTCT+AGG + chr3_3:17106864-17106883 Msa0444210:intron 30.0%
ATCAATGATAGGTATATGTG+GGG - chr3_3:17107005-17107024 None:intergenic 30.0%
CATCAATGATAGGTATATGT+GGG - chr3_3:17107006-17107025 None:intergenic 30.0%
TCATCAATGATAGGTATATG+TGG - chr3_3:17107007-17107026 None:intergenic 30.0%
!! TATACCTATCATTGATGATG+AGG + chr3_3:17107009-17107028 Msa0444210:intron 30.0%
TCATGAATATCAGGAATATC+AGG - chr3_3:17107111-17107130 None:intergenic 30.0%
GAAGGAATATCATGAATATC+AGG - chr3_3:17107120-17107139 None:intergenic 30.0%
!! TTATTTCTAGTGGACTTTCT+TGG - chr3_3:17107147-17107166 None:intergenic 30.0%
ACATAATCTTGTAGATAAGC+AGG - chr3_3:17107177-17107196 None:intergenic 30.0%
!!! ATAGGTTTTGGGTTCATTTT+GGG - chr3_3:17107298-17107317 None:intergenic 30.0%
AAAATCAAGTACAATGCTGA+TGG + chr3_3:17107452-17107471 Msa0444210:intron 30.0%
AAAGGTTACACTCAAATTGA+GGG + chr3_3:17107509-17107528 Msa0444210:intron 30.0%
TGTTAACATCTAATTGGTGA+AGG - chr3_3:17107622-17107641 None:intergenic 30.0%
! ATCATTGTATGGTTTAAAGC+AGG + chr3_3:17107739-17107758 Msa0444210:intron 30.0%
ATCAGTATGTTTGATGAACA+TGG - chr3_3:17107840-17107859 None:intergenic 30.0%
TTATGTGGATGACATTATCT+TGG + chr3_3:17107883-17107902 Msa0444210:intron 30.0%
!! GGACAATTGAAGTATTTTCT+TGG + chr3_3:17107977-17107996 Msa0444210:intron 30.0%
CCAATCAATCTTCTATAAGA+GGG - chr3_3:17108165-17108184 None:intergenic 30.0%
AAATGAAGATAGGAGTTTCT+GGG - chr3_3:17108342-17108361 None:intergenic 30.0%
TAAATGAAGATAGGAGTTTC+TGG - chr3_3:17108343-17108362 None:intergenic 30.0%
AACTCCTATCTTCATTTACA+AGG + chr3_3:17108345-17108364 Msa0444210:intron 30.0%
TGATTGTCACAAAACAAAAC+TGG - chr3_3:17108577-17108596 None:intergenic 30.0%
TTTGTACGTTCATGAAAAAC+TGG - chr3_3:17108625-17108644 None:intergenic 30.0%
AGATTGATTGTCATCTTGTT+AGG + chr3_3:17108653-17108672 Msa0444210:intron 30.0%
GATTGATTGTCATCTTGTTA+GGG + chr3_3:17108654-17108673 Msa0444210:intron 30.0%
AAACACTAAAGCCTATTACT+TGG - chr3_3:17104059-17104078 None:intergenic 30.0%
ATGAGTACCATAACATACTA+TGG - chr3_3:17104109-17104128 None:intergenic 30.0%
ATGATTGATCAATGGTTACA+AGG - chr3_3:17104150-17104169 None:intergenic 30.0%
AGCAATGTATAGATGGATAT+TGG + chr3_3:17109100-17109119 Msa0444210:CDS 30.0%
CATAAACTATCATGTGATTG+TGG + chr3_3:17109175-17109194 Msa0444210:CDS 30.0%
CTCAAATTGAAAAGTTCATC+AGG - chr3_3:17109221-17109240 None:intergenic 30.0%
!!! ATTATTTTTGGAGCAGCTTT+TGG + chr3_3:17109493-17109512 Msa0444210:intron 30.0%
TAGCAACTTTCAATTGCTAT+AGG + chr3_3:17109672-17109691 Msa0444210:intron 30.0%
GTTGAAAAGATAGAACTAAC+TGG + chr3_3:17109773-17109792 Msa0444210:intron 30.0%
! ATTTCTCTTATTTGGCAAGA+AGG + chr3_3:17109877-17109896 Msa0444210:intron 30.0%
! TTTCTCTTATTTGGCAAGAA+GGG + chr3_3:17109878-17109897 Msa0444210:intron 30.0%
AAAGAGAGAAGAGTAAAAGA+TGG + chr3_3:17109908-17109927 Msa0444210:intron 30.0%
AAGAGAGAAGAGTAAAAGAT+GGG + chr3_3:17109909-17109928 Msa0444210:intron 30.0%
! AAGAGAAAACAGAAAGGTAT+GGG - chr3_3:17109936-17109955 None:intergenic 30.0%
!! CTTTTGAAGAGAAAACAGAA+AGG - chr3_3:17109942-17109961 None:intergenic 30.0%
! CTTTCTGTTTTCTCTTCAAA+AGG + chr3_3:17109940-17109959 Msa0444210:intron 30.0%
AAAAAAGTCTAACATGCCAT+TGG + chr3_3:17109985-17110004 Msa0444210:intron 30.0%
ATATGGTTAAGTACCATTGT+GGG - chr3_3:17110340-17110359 None:intergenic 30.0%
AATATGGTTAAGTACCATTG+TGG - chr3_3:17110341-17110360 None:intergenic 30.0%
CAATGGTACTTAACCATATT+TGG + chr3_3:17110341-17110360 Msa0444210:intron 30.0%
TGTTGCTAAATCTAGGAAAA+CGG - chr3_3:17110384-17110403 None:intergenic 30.0%
AAAAGGTTGTTGCTAAATCT+AGG - chr3_3:17111286-17111305 None:intergenic 30.0%
!!! CATGTCACTTCATTTTGATT+AGG + chr3_3:17110652-17110671 Msa0444210:intron 30.0%
ACATATACATAACCTATGAG+CGG + chr3_3:17110768-17110787 Msa0444210:intron 30.0%
ATTGACATAATTGTTGGAGA+TGG + chr3_3:17110831-17110850 Msa0444210:intron 30.0%
!!! TTTTTAGCAAATGGCTTTGA+TGG + chr3_3:17110962-17110981 Msa0444210:intron 30.0%
CTAAATCTGAGAAAAAATGG+AGG + chr3_3:17111298-17111317 Msa0444210:intron 30.0%
ATATGGTTAAAGAACCATTG+TGG + chr3_3:17111340-17111359 Msa0444210:intron 30.0%
! AAGTACAAAAAAGGCATGTA+AGG + chr3_3:17111483-17111502 Msa0444210:intron 30.0%
!! ACATTAACTTGTGTAGTTCT+TGG + chr3_3:17111521-17111540 Msa0444210:intron 30.0%
TTTAGTCCTTTACCTACGAT+GGG - chr3_3:17103055-17103074 None:intergenic 35.0%
ATCGTAGGTAAAGGACTAAA+GGG + chr3_3:17103055-17103074 Msa0444210:intron 35.0%
GAATATTGGCACAAGGAAAA+AGG - chr3_3:17103111-17103130 None:intergenic 35.0%
GGTGTAACATGTCAGAATAT+TGG - chr3_3:17103125-17103144 None:intergenic 35.0%
! AACTCACCGATTATAACACA+TGG - chr3_3:17103285-17103304 None:intergenic 35.0%
! GCTTCGAAATTTTGTAGGTT+GGG + chr3_3:17103377-17103396 Msa0444210:intron 35.0%
! CTTCGAAATTTTGTAGGTTG+GGG + chr3_3:17103378-17103397 Msa0444210:intron 35.0%
! TTGTCTGATTTGAGTCCTTT+GGG - chr3_3:17103451-17103470 None:intergenic 35.0%
GACTGATTAAGTCACCAATT+TGG - chr3_3:17103859-17103878 None:intergenic 35.0%
AAGAGATCAGTTTGTCCTTT+AGG - chr3_3:17103914-17103933 None:intergenic 35.0%
TTACTTGAGCTCCAAGTAAT+AGG + chr3_3:17104045-17104064 Msa0444210:intron 35.0%
CTTACACAATAAGCTACTGT+AGG + chr3_3:17104082-17104101 Msa0444210:intron 35.0%
TGTAGGTCCATAGTATGTTA+TGG + chr3_3:17104099-17104118 Msa0444210:intron 35.0%
TACACTCAACTTGTCTTTCT+TGG + chr3_3:17104396-17104415 Msa0444210:intron 35.0%
AGAAGACGAAGTAGCAATAA+TGG - chr3_3:17104459-17104478 None:intergenic 35.0%
TATTTCGTTCATCCAAGTGA+AGG + chr3_3:17104541-17104560 Msa0444210:intron 35.0%
AGTTGGAACCATTGAATTTG+GGG - chr3_3:17104588-17104607 None:intergenic 35.0%
GTAGTTGGAACCATTGAATT+TGG - chr3_3:17104590-17104609 None:intergenic 35.0%
AACAAGCTTCCTTTCATCAA+TGG + chr3_3:17104652-17104671 Msa0444210:intron 35.0%
ATAATTATCAGGCACAGGTA+GGG - chr3_3:17104680-17104699 None:intergenic 35.0%
AGATCATAATTATCAGGCAC+AGG - chr3_3:17104685-17104704 None:intergenic 35.0%
CGGTTCAGATCATAATTATC+AGG - chr3_3:17104691-17104710 None:intergenic 35.0%
TCATTCCTGGCTTATCAATT+CGG + chr3_3:17104741-17104760 Msa0444210:intron 35.0%
GGCATTATCATGAAAGACAA+TGG - chr3_3:17104788-17104807 None:intergenic 35.0%
TTCACTGAACACTCTTAAAC+AGG + chr3_3:17104879-17104898 Msa0444210:intron 35.0%
TCACTGAACACTCTTAAACA+GGG + chr3_3:17104880-17104899 Msa0444210:intron 35.0%
GGATTATTTCACAGAGATGA+AGG + chr3_3:17104918-17104937 Msa0444210:intron 35.0%
TAATGCTTCTGTTCCTTCTA+TGG + chr3_3:17105173-17105192 Msa0444210:intron 35.0%
! CAGAAAGTACAATGTCTAGT+GGG - chr3_3:17105282-17105301 None:intergenic 35.0%
AATACTTCTTCTGGTGTATC+TGG + chr3_3:17105411-17105430 Msa0444210:intron 35.0%
!! ACTTGTAGCTTTATTGCAAC+AGG + chr3_3:17105458-17105477 Msa0444210:intron 35.0%
TTGATTATACCTGCAGAAGT+AGG - chr3_3:17105585-17105604 None:intergenic 35.0%
ATCACAACATATGTGCTCAT+TGG - chr3_3:17105658-17105677 None:intergenic 35.0%
!! TCCTGTATGATGCATTGATT+AGG - chr3_3:17105888-17105907 None:intergenic 35.0%
TCAACATCCATGAAGATGAT+TGG + chr3_3:17105909-17105928 Msa0444210:intron 35.0%
! ATCCATGAAGATGATTGGTT+TGG + chr3_3:17105914-17105933 Msa0444210:intron 35.0%
!! AAGTGCCAAATGGCTTTATT+TGG - chr3_3:17106059-17106078 None:intergenic 35.0%
ATAAAGCCATTTGGCACTTT+AGG + chr3_3:17106060-17106079 Msa0444210:intron 35.0%
CTCTTACATCTTGACATTTG+GGG + chr3_3:17106242-17106261 Msa0444210:intron 35.0%
ATTTGTGTCCATGCATAGAA+GGG - chr3_3:17106280-17106299 None:intergenic 35.0%
TATTTGTGTCCATGCATAGA+AGG - chr3_3:17106281-17106300 None:intergenic 35.0%
TAATCCACAAGAATCTACTG+TGG - chr3_3:17106325-17106344 None:intergenic 35.0%
! TTTGACATGATGGGAAACTT+CGG - chr3_3:17106366-17106385 None:intergenic 35.0%
TATCAGATCTGATGCATTTG+GGG - chr3_3:17106427-17106446 None:intergenic 35.0%
CCAAGAGATTCATAAAAGGT+TGG - chr3_3:17106470-17106489 None:intergenic 35.0%
! CCAACCTTTTATGAATCTCT+TGG + chr3_3:17106467-17106486 Msa0444210:intron 35.0%
! GGGTTTCAACACAAGATTTT+TGG - chr3_3:17106502-17106521 None:intergenic 35.0%
! TCAACTCTACCATTTTGTTG+GGG - chr3_3:17106524-17106543 None:intergenic 35.0%
!! GCATATTTTGAATGTTGGGA+AGG + chr3_3:17106556-17106575 Msa0444210:intron 35.0%
CTAAACTTCCTGCATCTTAT+TGG + chr3_3:17106594-17106613 Msa0444210:intron 35.0%
AATACCTACTCCTTTACTTC+AGG + chr3_3:17106655-17106674 Msa0444210:intron 35.0%
ATACCTACTCCTTTACTTCA+GGG + chr3_3:17106656-17106675 Msa0444210:intron 35.0%
GACTCACTATTACTTGGATA+AGG - chr3_3:17106917-17106936 None:intergenic 35.0%
! TCAGAAACAACAGGTTGAAT+AGG - chr3_3:17106968-17106987 None:intergenic 35.0%
TCAATGATAGGTATATGTGG+GGG - chr3_3:17107004-17107023 None:intergenic 35.0%
TAGTCCTCATCATCAATGAT+AGG - chr3_3:17107016-17107035 None:intergenic 35.0%
!!! AGGTGCAGTTTTATTTCTAG+TGG - chr3_3:17107157-17107176 None:intergenic 35.0%
!!! CATAGGTTTTGGGTTCATTT+TGG - chr3_3:17107299-17107318 None:intergenic 35.0%
TATATCCATCTGTAGCCTAT+AGG - chr3_3:17107429-17107448 None:intergenic 35.0%
CTCAATTTGAGTGTAACCTT+TGG - chr3_3:17107510-17107529 None:intergenic 35.0%
CAAAGGTTACACTCAAATTG+AGG + chr3_3:17107508-17107527 Msa0444210:intron 35.0%
AAGTCTGATAGTAGTCATCT+TGG - chr3_3:17107567-17107586 None:intergenic 35.0%
GTTAACAATGCTTTCCTTCA+TGG + chr3_3:17107635-17107654 Msa0444210:intron 35.0%
CACTTCCACAAAATCAAATC+AGG + chr3_3:17107700-17107719 Msa0444210:intron 35.0%
! CTTCTCATACCATTTTCTAC+TGG - chr3_3:17107765-17107784 None:intergenic 35.0%
! AAGTGAAATTTTGCTCTCTG+AGG - chr3_3:17107799-17107818 None:intergenic 35.0%
CAGAGAGCAAAATTTCACTT+AGG + chr3_3:17107799-17107818 Msa0444210:intron 35.0%
! TTCATCTTTTACCATCCTTC+TGG + chr3_3:17107859-17107878 Msa0444210:intron 35.0%
CTTGAAAGAAGAATGCAGAA+TGG - chr3_3:17107945-17107964 None:intergenic 35.0%
! AGTTTAAGAGAGGCATATGA+AGG - chr3_3:17108108-17108127 None:intergenic 35.0%
GAGGGAATGTCTTCATATAA+TGG - chr3_3:17108147-17108166 None:intergenic 35.0%
CCCTCTTATAGAAGATTGAT+TGG + chr3_3:17108162-17108181 Msa0444210:intron 35.0%
GCCAATCAATCTTCTATAAG+AGG - chr3_3:17108166-17108185 None:intergenic 35.0%
TGTGTGATGAAAGTGATATC+TGG - chr3_3:17108216-17108235 None:intergenic 35.0%
! GAGTTGGTTTAGAAAGAAAC+TGG - chr3_3:17108248-17108267 None:intergenic 35.0%
! AGAGTGCTCAAATATCTCAA+AGG + chr3_3:17108291-17108310 Msa0444210:intron 35.0%
AAATATCTCAAAGGTTGTCC+AGG + chr3_3:17108300-17108319 Msa0444210:intron 35.0%
GGGAAAAATAAACCTTTACC+TGG - chr3_3:17108321-17108340 None:intergenic 35.0%
AATGAAGATAGGAGTTTCTG+GGG - chr3_3:17108341-17108360 None:intergenic 35.0%
!!! AAGGATTTTTTGATGCAGAC+TGG + chr3_3:17108364-17108383 Msa0444210:intron 35.0%
!!! AGGATTTTTTGATGCAGACT+GGG + chr3_3:17108365-17108384 Msa0444210:intron 35.0%
ACAAAACAAAACTGGAAGCT+TGG - chr3_3:17108569-17108588 None:intergenic 35.0%
ACGTTCATGAAAAACTGGAT+TGG - chr3_3:17108620-17108639 None:intergenic 35.0%
! TCATGAACGTACAAAGCATT+TGG + chr3_3:17108630-17108649 Msa0444210:intron 35.0%
CATCATGAAACTCTAACTTG+CGG + chr3_3:17108693-17108712 Msa0444210:intron 35.0%
! ATCATGAAACTCTAACTTGC+GGG + chr3_3:17108694-17108713 Msa0444210:intron 35.0%
TTACTTGAGCTCCAAGTAAT+AGG + chr3_3:17104045-17104064 Msa0444210:intron 35.0%
TGTCATTGGCAAAACTACAT+GGG - chr3_3:17108969-17108988 None:intergenic 35.0%
ATGTCATTGGCAAAACTACA+TGG - chr3_3:17108970-17108989 None:intergenic 35.0%
TACAGAGAGCAATGTATAGA+TGG + chr3_3:17109093-17109112 Msa0444210:intron 35.0%
CAATCGATATAAACGTTCCT+TGG + chr3_3:17109253-17109272 Msa0444210:intron 35.0%
TTGGTGAGTTCATTTAGGTA+TGG + chr3_3:17109521-17109540 Msa0444210:intron 35.0%
TGAGTTCATTTAGGTATGGT+GGG + chr3_3:17109525-17109544 Msa0444210:intron 35.0%
GAAGAGAAAACAGAAAGGTA+TGG - chr3_3:17109937-17109956 None:intergenic 35.0%
TTCAAAAGGGAGAAGAAAGA+CGG + chr3_3:17109954-17109973 Msa0444210:intron 35.0%
CCATATGGTAAAACATGCAT+GGG - chr3_3:17110119-17110138 None:intergenic 35.0%
! CCATGCATGTTTTACCATAT+GGG + chr3_3:17110117-17110136 Msa0444210:intron 35.0%
! CATGCATGTTTTACCATATG+GGG + chr3_3:17110118-17110137 Msa0444210:intron 35.0%
! ATGCATGTTTTACCATATGG+GGG + chr3_3:17110119-17110138 Msa0444210:intron 35.0%
ATGGTAAAAGACAAACACGT+GGG - chr3_3:17110200-17110219 None:intergenic 35.0%
! GTGTTTGTCTTTTACCATGT+CGG + chr3_3:17110202-17110221 Msa0444210:intron 35.0%
TTCAAAACACCAACATTCGT+GGG - chr3_3:17110284-17110303 None:intergenic 35.0%
GTTGCTAAATCTAGGAAAAC+GGG - chr3_3:17110383-17110402 None:intergenic 35.0%
AGAATGAGAAATTATCCCCT+TGG - chr3_3:17110803-17110822 None:intergenic 35.0%
CACATATACATAACCATGAG+CGG - chr3_3:17110883-17110902 None:intergenic 35.0%
!!! CATGTCGCTTCATTTTGATT+AGG - chr3_3:17110994-17111013 None:intergenic 35.0%
GGTGGTATCAGTTTATGAAA+AGG - chr3_3:17111051-17111070 None:intergenic 35.0%
!! TTAACTTGTGTAGTTCTTGG+CGG + chr3_3:17111524-17111543 Msa0444210:intron 35.0%
AAGATGCAGAAGCTCTTCAA+AGG + chr3_3:17102675-17102694 Msa0444210:CDS 40.0%
AGATGCAGAAGCTCTTCAAA+GGG + chr3_3:17102676-17102695 Msa0444210:CDS 40.0%
TTAGTCCTTTACCTACGATG+GGG - chr3_3:17103054-17103073 None:intergenic 40.0%
CTTTAGTCCTTTACCTACGA+TGG - chr3_3:17103056-17103075 None:intergenic 40.0%
CATCGTAGGTAAAGGACTAA+AGG + chr3_3:17103054-17103073 Msa0444210:intron 40.0%
CATGTCAGAATATTGGCACA+AGG - chr3_3:17103118-17103137 None:intergenic 40.0%
! ACTGGGCTTCGAAATTTTGT+AGG + chr3_3:17103372-17103391 Msa0444210:intron 40.0%
! GGCTTCGAAATTTTGTAGGT+TGG + chr3_3:17103376-17103395 Msa0444210:intron 40.0%
GTCATAGAAATGCTACCCAA+AGG + chr3_3:17103433-17103452 Msa0444210:CDS 40.0%
! CTTGTCTGATTTGAGTCCTT+TGG - chr3_3:17103452-17103471 None:intergenic 40.0%
!! TGAGCTTTCAGGTGATTTTG+AGG + chr3_3:17103518-17103537 Msa0444210:CDS 40.0%
!!! GTGATTTTGAGGTACATCCA+CGG + chr3_3:17103529-17103548 Msa0444210:intron 40.0%
TGACTTATGCGCATTTGATG+TGG + chr3_3:17103955-17103974 Msa0444210:intron 40.0%
AAACTCAACGTGATAATCGG+CGG + chr3_3:17103985-17104004 Msa0444210:intron 40.0%
! TGGTATCAGATTTTCCCTCA+AGG + chr3_3:17104202-17104221 Msa0444210:intron 40.0%
! GGTATCAGATTTTCCCTCAA+GGG + chr3_3:17104203-17104222 Msa0444210:intron 40.0%
CGTAACAAACTTTCCCTTGA+GGG - chr3_3:17104219-17104238 None:intergenic 40.0%
!! CCTCAAGGGAAAGTTTGTTA+CGG + chr3_3:17104217-17104236 Msa0444210:intron 40.0%
! ACAAAAATGGCGGAAAACGA+AGG - chr3_3:17104304-17104323 None:intergenic 40.0%
GAACGAAGCAACAAAAATGG+CGG - chr3_3:17104314-17104333 None:intergenic 40.0%
GCAGAACGAAGCAACAAAAA+TGG - chr3_3:17104317-17104336 None:intergenic 40.0%
GTAGTTTCCCCCAAATTCAA+TGG + chr3_3:17104577-17104596 Msa0444210:intron 40.0%
GTTGGAACCATTGAATTTGG+GGG - chr3_3:17104587-17104606 None:intergenic 40.0%
! GATGAAAGGAAGCTTGTTCT+TGG - chr3_3:17104650-17104669 None:intergenic 40.0%
CATAATTATCAGGCACAGGT+AGG - chr3_3:17104681-17104700 None:intergenic 40.0%
ATGATCTGAACCGTAATGCT+TGG + chr3_3:17104698-17104717 Msa0444210:intron 40.0%
TGATCTGAACCGTAATGCTT+GGG + chr3_3:17104699-17104718 Msa0444210:intron 40.0%
TACAACGTTCCCAAGCATTA+CGG - chr3_3:17104711-17104730 None:intergenic 40.0%
TGAAACCGAATTGATAAGCC+AGG - chr3_3:17104749-17104768 None:intergenic 40.0%
! ACAGGGTACCAAATCTGTAT+TGG + chr3_3:17104897-17104916 Msa0444210:intron 40.0%
GGAAAAGGGCAATGACAATT+AGG - chr3_3:17104979-17104998 None:intergenic 40.0%
CATCACACTTGCAAGGAAAA+GGG - chr3_3:17104993-17105012 None:intergenic 40.0%
TCTTCAAGAGTTGCCATAGA+AGG - chr3_3:17105189-17105208 None:intergenic 40.0%
TTGTGATGCAAGAAAGTCTC+AGG + chr3_3:17105230-17105249 Msa0444210:intron 40.0%
TGTGATGCAAGAAAGTCTCA+GGG + chr3_3:17105231-17105250 Msa0444210:intron 40.0%
! GCAGAAAGTACAATGTCTAG+TGG - chr3_3:17105283-17105302 None:intergenic 40.0%
CTCAGATACATCACTAGAAG+AGG - chr3_3:17105388-17105407 None:intergenic 40.0%
CTCTTCTAGTGATGTATCTG+AGG + chr3_3:17105386-17105405 Msa0444210:intron 40.0%
! TCTGAGGTCAATACTTCTTC+TGG + chr3_3:17105402-17105421 Msa0444210:intron 40.0%
! TGGTTTGTCTCAAGACAAGA+TGG + chr3_3:17105431-17105450 Msa0444210:intron 40.0%
ACAGAACCAGAAGAAGTTGA+AGG - chr3_3:17105501-17105520 None:intergenic 40.0%
AGTAACTGTGGTAGGTGAAA+TGG - chr3_3:17105706-17105725 None:intergenic 40.0%
TTCGGTAAAGTAACTGTGGT+AGG - chr3_3:17105714-17105733 None:intergenic 40.0%
! ACCACAGTTACTTTACCGAA+TGG + chr3_3:17105714-17105733 Msa0444210:intron 40.0%
ACCATTCGGTAAAGTAACTG+TGG - chr3_3:17105718-17105737 None:intergenic 40.0%
ACAGTGACAGTTGAACCATT+CGG - chr3_3:17105732-17105751 None:intergenic 40.0%
GCCTAATCAATGCATCATAC+AGG + chr3_3:17105884-17105903 Msa0444210:intron 40.0%
AGCCAAACCAATCATCTTCA+TGG - chr3_3:17105919-17105938 None:intergenic 40.0%
ATGCATAGAAGGGACTGAAA+GGG - chr3_3:17106270-17106289 None:intergenic 40.0%
ATGACCACAGTAGATTCTTG+TGG + chr3_3:17106318-17106337 Msa0444210:intron 40.0%
TTTGGGGGTGACATGAAATT+GGG - chr3_3:17106411-17106430 None:intergenic 40.0%
ATTTGGGGGTGACATGAAAT+TGG - chr3_3:17106412-17106431 None:intergenic 40.0%
ATCAGATCTGATGCATTTGG+GGG - chr3_3:17106426-17106445 None:intergenic 40.0%
AGGTTGGAATGAGGAATTCT+GGG - chr3_3:17106454-17106473 None:intergenic 40.0%
AAGGTTGGAATGAGGAATTC+TGG - chr3_3:17106455-17106474 None:intergenic 40.0%
! AACTCTACCATTTTGTTGGG+GGG - chr3_3:17106522-17106541 None:intergenic 40.0%
! CAACTCTACCATTTTGTTGG+GGG - chr3_3:17106523-17106542 None:intergenic 40.0%
GCATATGACCAATAAGATGC+AGG - chr3_3:17106605-17106624 None:intergenic 40.0%
! TCTTGCTCTAGGTTGAAGTT+TGG - chr3_3:17106783-17106802 None:intergenic 40.0%
! GTTTTCTTGGGCTATAAGTC+AGG + chr3_3:17106809-17106828 Msa0444210:intron 40.0%
CTACAAAGGCTTCATTCTTC+TGG + chr3_3:17106832-17106851 Msa0444210:intron 40.0%
GTGACAGACTCACTATTACT+TGG - chr3_3:17106923-17106942 None:intergenic 40.0%
! TGAGTCTGTCACTTCTCAAT+GGG + chr3_3:17106931-17106950 Msa0444210:intron 40.0%
TCAGGTGATTGTATGTGTGA+AGG - chr3_3:17107049-17107068 None:intergenic 40.0%
CAGGAATATCAGGAGAATGA+TGG - chr3_3:17107101-17107120 None:intergenic 40.0%
! AAATTTGCTTGCCTCAGCAT+AGG - chr3_3:17107316-17107335 None:intergenic 40.0%
AGGCAAGCAAATTTGACTGT+TGG + chr3_3:17107322-17107341 Msa0444210:intron 40.0%
AGTTGAATTGTCAGCTCTTG+AGG + chr3_3:17107359-17107378 Msa0444210:intron 40.0%
CCTATAGGCTTGATGTGATA+TGG - chr3_3:17107414-17107433 None:intergenic 40.0%
CCATATCACATCAAGCCTAT+AGG + chr3_3:17107411-17107430 Msa0444210:intron 40.0%
ATAGTAGTCATCTTGGCAAC+AGG - chr3_3:17107560-17107579 None:intergenic 40.0%
!! GCAGACCTGATTTGATTTTG+TGG - chr3_3:17107708-17107727 None:intergenic 40.0%
TAAAGCAGGCCAGTAGAAAA+TGG + chr3_3:17107753-17107772 Msa0444210:intron 40.0%
!! GAAATTTTGCTCTCTGAGGA+TGG - chr3_3:17107795-17107814 None:intergenic 40.0%
!! TACCATCCTTCTGGTTTATG+TGG + chr3_3:17107868-17107887 Msa0444210:intron 40.0%
ATCCACATAAACCAGAAGGA+TGG - chr3_3:17107873-17107892 None:intergenic 40.0%
TGTCATCCACATAAACCAGA+AGG - chr3_3:17107877-17107896 None:intergenic 40.0%
! GCAGAATGGATTTGATGTGT+TGG - chr3_3:17107931-17107950 None:intergenic 40.0%
GAAGTAACTCACTCTAAGCA+AGG + chr3_3:17108004-17108023 Msa0444210:intron 40.0%
! AGAAACAGGTTTGGAGTTGA+TGG - chr3_3:17108082-17108101 None:intergenic 40.0%
TATCTGGTCTGGTAGAATTG+AGG - chr3_3:17108200-17108219 None:intergenic 40.0%
GATGAAAGTGATATCTGGTC+TGG - chr3_3:17108211-17108230 None:intergenic 40.0%
TCTGGTCAGTACTTCTTCAT+AGG + chr3_3:17108417-17108436 Msa0444210:intron 40.0%
TAGGCAACTCTCTGATTTCA+TGG + chr3_3:17108436-17108455 Msa0444210:intron 40.0%
AGAGGAAGATCTAGAAACAG+TGG - chr3_3:17108478-17108497 None:intergenic 40.0%
!! TGGATTGGCAGCTATATGAA+GGG - chr3_3:17108605-17108624 None:intergenic 40.0%
! TCATGAAACTCTAACTTGCG+GGG + chr3_3:17108695-17108714 Msa0444210:intron 40.0%
CTTACACAATAAGCTACTGC+AGG + chr3_3:17108782-17108801 Msa0444210:intron 40.0%
TGCAGGTCCATAGTATGTTA+TGG + chr3_3:17108799-17108818 Msa0444210:intron 40.0%
TTGGCAAAACTACATGGGAT+TGG - chr3_3:17108964-17108983 None:intergenic 40.0%
TCGATATAAACGTTCCTTGG+AGG + chr3_3:17109256-17109275 Msa0444210:intron 40.0%
!!! ATTTTTGGAGCAGCTTTTGG+TGG + chr3_3:17109496-17109515 Msa0444210:intron 40.0%
!!! TTTTTGGAGCAGCTTTTGGT+GGG + chr3_3:17109497-17109516 Msa0444210:intron 40.0%
GTGAGTTCATTTAGGTATGG+TGG + chr3_3:17109524-17109543 Msa0444210:intron 40.0%
TGAAGCTGATATGCTTCATG+AGG + chr3_3:17109577-17109596 Msa0444210:intron 40.0%
AATTGCTATAGGCATGACCA+TGG + chr3_3:17109683-17109702 Msa0444210:intron 40.0%
ATGGTAAAACATGCATGGGA+GGG - chr3_3:17110115-17110134 None:intergenic 40.0%
TATGGTAAAACATGCATGGG+AGG - chr3_3:17110116-17110135 None:intergenic 40.0%
! CCCATGCATGTTTTACCATA+TGG + chr3_3:17110116-17110135 Msa0444210:intron 40.0%
CCCATATGGTAAAACATGCA+TGG - chr3_3:17110120-17110139 None:intergenic 40.0%
! TGCATGTTTTACCATATGGG+GGG + chr3_3:17110120-17110139 Msa0444210:intron 40.0%
CATGGTAAAAGACAAACACG+TGG - chr3_3:17110201-17110220 None:intergenic 40.0%
AAAGGGTAAAAACACCGACA+TGG - chr3_3:17110219-17110238 None:intergenic 40.0%
! GGTTTAGGTTTGTCCAAGTT+AGG - chr3_3:17110263-17110282 None:intergenic 40.0%
AAACCTAAACCCACGAATGT+TGG + chr3_3:17110272-17110291 Msa0444210:intron 40.0%
GTTCAAAACACCAACATTCG+TGG - chr3_3:17110285-17110304 None:intergenic 40.0%
CTAAATCTAGGAAAACGGGA+GGG - chr3_3:17110379-17110398 None:intergenic 40.0%
GGCGGTATCAATTTGTGAAA+AGG + chr3_3:17110594-17110613 Msa0444210:intron 40.0%
AAGAACCATTGTGGCACAAA+AGG + chr3_3:17111349-17111368 Msa0444210:intron 40.0%
! TTATGCCTTTTGTGCCACAA+TGG - chr3_3:17111357-17111376 None:intergenic 40.0%
TTCAAAACACCAGCATTCGT+GGG + chr3_3:17111427-17111446 Msa0444210:intron 40.0%
GTGGTTGGAAGGAGCAATAA+GGG - chr3_3:17102645-17102664 None:intergenic 45.0%
AGTGGTTGGAAGGAGCAATA+AGG - chr3_3:17102646-17102665 None:intergenic 45.0%
ATCTTCAACTGGAGAGTGGT+TGG - chr3_3:17102660-17102679 None:intergenic 45.0%
AGAGCTTCTGCATCTTCAAC+TGG - chr3_3:17102671-17102690 None:intergenic 45.0%
GCTCTTCAAAGGGCTGTTAA+AGG + chr3_3:17102686-17102705 Msa0444210:CDS 45.0%
CGATGGGGCTATTAGTATCT+CGG - chr3_3:17103039-17103058 None:intergenic 45.0%
GATACTAATAGCCCCATCGT+AGG + chr3_3:17103040-17103059 Msa0444210:intron 45.0%
AATAGCCCCATCGTAGGTAA+AGG + chr3_3:17103046-17103065 Msa0444210:intron 45.0%
CCGTAACAAACTTTCCCTTG+AGG - chr3_3:17104220-17104239 None:intergenic 45.0%
TTTCATCTACAAGGCGCAAC+GGG - chr3_3:17104258-17104277 None:intergenic 45.0%
GTTTCATCTACAAGGCGCAA+CGG - chr3_3:17104259-17104278 None:intergenic 45.0%
ACAGAGTTTGGACCTTCACT+TGG - chr3_3:17104556-17104575 None:intergenic 45.0%
GGGGAAACTACAACAGAGTT+TGG - chr3_3:17104568-17104587 None:intergenic 45.0%
ATGGTTCCAACTACCTCTCA+TGG + chr3_3:17104596-17104615 Msa0444210:intron 45.0%
CGTTCTATGCAACGTGCTTT+AGG + chr3_3:17104622-17104641 Msa0444210:intron 45.0%
GGTAGGGTTCCATTGATGAA+AGG - chr3_3:17104664-17104683 None:intergenic 45.0%
TCACAGAGATGAAGGCTTTG+TGG + chr3_3:17104926-17104945 Msa0444210:intron 45.0%
! CACAGAGATGAAGGCTTTGT+GGG + chr3_3:17104927-17104946 Msa0444210:intron 45.0%
GGGCAATGACAATTAGGAAG+AGG - chr3_3:17104973-17104992 None:intergenic 45.0%
GCATCACACTTGCAAGGAAA+AGG - chr3_3:17104994-17105013 None:intergenic 45.0%
TTGCAAGTGTGATGCTGTGA+GGG + chr3_3:17104999-17105018 Msa0444210:intron 45.0%
TCCTCTTCCCACATTGAACA+AGG + chr3_3:17105119-17105138 Msa0444210:intron 45.0%
ACCTTGTTCAATGTGGGAAG+AGG - chr3_3:17105123-17105142 None:intergenic 45.0%
GTGATGCAAGAAAGTCTCAG+GGG + chr3_3:17105232-17105251 Msa0444210:intron 45.0%
CCAGAAGAAGTTGAAGGTGA+GGG - chr3_3:17105495-17105514 None:intergenic 45.0%
ACCAGAAGAAGTTGAAGGTG+AGG - chr3_3:17105496-17105515 None:intergenic 45.0%
TTGAGGAGCAGCAACATGAT+TGG - chr3_3:17105526-17105545 None:intergenic 45.0%
GAAGTAGGAGTCAAGGAAGA+AGG - chr3_3:17105570-17105589 None:intergenic 45.0%
! ACCAAGCCTAAAGTGCCAAA+TGG - chr3_3:17106069-17106088 None:intergenic 45.0%
TGCATAGAAGGGACTGAAAG+GGG - chr3_3:17106269-17106288 None:intergenic 45.0%
CATGCATAGAAGGGACTGAA+AGG - chr3_3:17106271-17106290 None:intergenic 45.0%
CTTTCAGTCCCTTCTATGCA+TGG + chr3_3:17106269-17106288 Msa0444210:intron 45.0%
GTTGAAACCCCCCAACAAAA+TGG + chr3_3:17106512-17106531 Msa0444210:intron 45.0%
TGACCCTGAAGTAAAGGAGT+AGG - chr3_3:17106662-17106681 None:intergenic 45.0%
GGCTATAAGTCAGGCTACAA+AGG + chr3_3:17106818-17106837 Msa0444210:intron 45.0%
! GTGAGTCTGTCACTTCTCAA+TGG + chr3_3:17106930-17106949 Msa0444210:intron 45.0%
! TCAACTGGCTCAGAAACAAC+AGG - chr3_3:17106977-17106996 None:intergenic 45.0%
!! ATATGTGGGGGAGTATCAAC+TGG - chr3_3:17106992-17107011 None:intergenic 45.0%
GGAGGTGAGTTTGTAATGTC+AGG - chr3_3:17107067-17107086 None:intergenic 45.0%
!! AGAATGATGGACAGTGAAGG+AGG - chr3_3:17107088-17107107 None:intergenic 45.0%
!! AGGAGAATGATGGACAGTGA+AGG - chr3_3:17107091-17107110 None:intergenic 45.0%
GTGGACTTTCTTGGTGAAGA+AGG - chr3_3:17107138-17107157 None:intergenic 45.0%
GGTAAGAAGCAGTGTGTGAA+TGG - chr3_3:17107206-17107225 None:intergenic 45.0%
TGAACCCAAAACCTATGCTG+AGG + chr3_3:17107302-17107321 Msa0444210:intron 45.0%
! CTTGCCTCAGCATAGGTTTT+GGG - chr3_3:17107309-17107328 None:intergenic 45.0%
CTCTTGAGGCAACATGTACT+TGG + chr3_3:17107373-17107392 Msa0444210:intron 45.0%
TCAAGCCTATAGGCTACAGA+TGG + chr3_3:17107421-17107440 Msa0444210:intron 45.0%
GTACAATGCTGATGGTTCAG+TGG + chr3_3:17107460-17107479 Msa0444210:intron 45.0%
GGAGAGATACAAAGCCAGAT+TGG + chr3_3:17107481-17107500 Msa0444210:intron 45.0%
! AAAGCCAGATTGGTTGCCAA+AGG + chr3_3:17107491-17107510 Msa0444210:intron 45.0%
GTAACCTTTGGCAACCAATC+TGG - chr3_3:17107498-17107517 None:intergenic 45.0%
CCTCTTGCAATTCACCATGA+AGG - chr3_3:17107652-17107671 None:intergenic 45.0%
CCTTCATGGTGAATTGCAAG+AGG + chr3_3:17107649-17107668 Msa0444210:intron 45.0%
GTTTATATGATGCTCCCTCC+TGG + chr3_3:17107674-17107693 Msa0444210:intron 45.0%
! GATTTTGTGGAAGTGACACC+AGG - chr3_3:17107695-17107714 None:intergenic 45.0%
GTGGATGACATTATCTTGGC+AGG + chr3_3:17107887-17107906 Msa0444210:intron 45.0%
GCAGTATGATGTGTCTGAGT+TGG - chr3_3:17108264-17108283 None:intergenic 45.0%
CTCAAAGGTTGTCCAGGTAA+AGG + chr3_3:17108306-17108325 Msa0444210:intron 45.0%
!!! TTTTTTGATGCAGACTGGGC+TGG + chr3_3:17108369-17108388 Msa0444210:intron 45.0%
GCAACTCTCTGATTTCATGG+AGG + chr3_3:17108439-17108458 Msa0444210:intron 45.0%
AGCGCTATACTTAGCTTCAG+AGG - chr3_3:17108496-17108515 None:intergenic 45.0%
! GTATAGCGCTTTAGCTTCAG+TGG + chr3_3:17108506-17108525 Msa0444210:intron 45.0%
!! CTGGATTGGCAGCTATATGA+AGG - chr3_3:17108606-17108625 None:intergenic 45.0%
GTTAGGGAAAAACTCCAAGC+TGG + chr3_3:17108670-17108689 Msa0444210:intron 45.0%
AGAGTTTCATGATGCCAGCT+TGG - chr3_3:17108687-17108706 None:intergenic 45.0%
! CATGAAACTCTAACTTGCGG+GGG + chr3_3:17108696-17108715 Msa0444210:intron 45.0%
AACAAAGCTTCACGTTCTGC+TGG - chr3_3:17109128-17109147 None:intergenic 45.0%
! AGCAGAACGTGAAGCTTTGT+TGG + chr3_3:17109127-17109146 Msa0444210:CDS 45.0%
ACGAAGATGGCCATTGGTAT+TGG - chr3_3:17109294-17109313 None:intergenic 45.0%
! TATGACTTGCCTGACGAAGA+TGG - chr3_3:17109307-17109326 None:intergenic 45.0%
!!! TTTTGGAGCAGCTTTTGGTG+GGG + chr3_3:17109498-17109517 Msa0444210:intron 45.0%
!! TGGGGTTGGTGAGTTCATTT+AGG + chr3_3:17109516-17109535 Msa0444210:intron 45.0%
! ATTTAGGTATGGTGGGAGTG+AGG + chr3_3:17109532-17109551 Msa0444210:intron 45.0%
GAGTGAGGTCAATGCAAGTT+TGG + chr3_3:17109547-17109566 Msa0444210:intron 45.0%
CCTTAGTGATAGCAATGCCA+TGG - chr3_3:17109703-17109722 None:intergenic 45.0%
CCATGGCATTGCTATCACTA+AGG + chr3_3:17109700-17109719 Msa0444210:intron 45.0%
! AGCAATTTGTTCCCCCCATA+TGG - chr3_3:17110134-17110153 None:intergenic 45.0%
AGACAAACACGTGGGATTGT+GGG - chr3_3:17110192-17110211 None:intergenic 45.0%
AAGACAAACACGTGGGATTG+TGG - chr3_3:17110193-17110212 None:intergenic 45.0%
ACACCAACATTCGTGGGTTT+AGG - chr3_3:17110278-17110297 None:intergenic 45.0%
! GTATGCGTTTTGTCCCACAA+TGG + chr3_3:17110324-17110343 Msa0444210:intron 45.0%
GCTAAATCTAGGAAAACGGG+AGG - chr3_3:17110380-17110399 None:intergenic 45.0%
ACACCAAAGAACACGACTCT+TGG + chr3_3:17110573-17110592 Msa0444210:intron 45.0%
TGAGCGGTGAAGTAAGTCAA+GGG - chr3_3:17110867-17110886 None:intergenic 45.0%
ATGAGCGGTGAAGTAAGTCA+AGG - chr3_3:17110868-17110887 None:intergenic 45.0%
TTGACTTACTTCACCGCTCA+TGG + chr3_3:17110867-17110886 Msa0444210:intron 45.0%
ACACCAAAGAACACGACTCT+TGG - chr3_3:17110573-17110592 None:intergenic 45.0%
!! GAGTCGTGTTCTTTGGTGTT+AGG + chr3_3:17111073-17111092 Msa0444210:intron 45.0%
GTTCAAAACACCAGCATTCG+TGG + chr3_3:17111426-17111445 Msa0444210:intron 45.0%
GTGTAGTTCTTGGCGGAAAA+TGG + chr3_3:17111531-17111550 Msa0444210:intron 45.0%
TCAACTGGAGAGTGGTTGGA+AGG - chr3_3:17102656-17102675 None:intergenic 50.0%
CTGCATCTTCAACTGGAGAG+TGG - chr3_3:17102664-17102683 None:intergenic 50.0%
CGTCTTGAGTCTGAGCTTTC+AGG + chr3_3:17103507-17103526 Msa0444210:CDS 50.0%
CTGATTGTTGCTACGTGCCA+TGG - chr3_3:17104494-17104513 None:intergenic 50.0%
ACGACTCCATGAGAGGTAGT+TGG - chr3_3:17104605-17104624 None:intergenic 50.0%
GCATAGAACGACTCCATGAG+AGG - chr3_3:17104612-17104631 None:intergenic 50.0%
CTCACAGCATCACACTTGCA+AGG - chr3_3:17105000-17105019 None:intergenic 50.0%
CTTGCAAGTGTGATGCTGTG+AGG + chr3_3:17104998-17105017 Msa0444210:intron 50.0%
CCCTCACCTTCAACTTCTTC+TGG + chr3_3:17105492-17105511 Msa0444210:intron 50.0%
GTGTAGCTGGAAGAGACTTG+AGG - chr3_3:17105543-17105562 None:intergenic 50.0%
AGGAGTCAAGGAAGAAGGAG+TGG - chr3_3:17105565-17105584 None:intergenic 50.0%
TCCTTGACTCCTACTTCTGC+AGG + chr3_3:17105573-17105592 Msa0444210:intron 50.0%
ACCTGCAGAAGTAGGAGTCA+AGG - chr3_3:17105577-17105596 None:intergenic 50.0%
ACTGTCACTGTCACACATGC+TGG + chr3_3:17105741-17105760 Msa0444210:intron 50.0%
! GGTTTGGCTAGTCAGCAAGA+TGG + chr3_3:17105930-17105949 Msa0444210:intron 50.0%
GCCATTTGGCACTTTAGGCT+TGG + chr3_3:17106065-17106084 Msa0444210:intron 50.0%
GGAGACTGACCCTGAAGTAA+AGG - chr3_3:17106668-17106687 None:intergenic 50.0%
!! ATGATGGACAGTGAAGGAGG+AGG - chr3_3:17107085-17107104 None:intergenic 50.0%
! GCTTGCCTCAGCATAGGTTT+TGG - chr3_3:17107310-17107329 None:intergenic 50.0%
TTGTGGAAGTGACACCAGGA+GGG - chr3_3:17107691-17107710 None:intergenic 50.0%
TTTGTGGAAGTGACACCAGG+AGG - chr3_3:17107692-17107711 None:intergenic 50.0%
! TGAAGGCGCAGAAACAGGTT+TGG - chr3_3:17108091-17108110 None:intergenic 50.0%
! GCATATGAAGGCGCAGAAAC+AGG - chr3_3:17108096-17108115 None:intergenic 50.0%
GATAGCAGGCGCTCTATTTC+TGG + chr3_3:17108399-17108418 Msa0444210:intron 50.0%
GACGTGGCTACCAATACCAA+TGG + chr3_3:17109281-17109300 Msa0444210:intron 50.0%
TACCAATGGCCATCTTCGTC+AGG + chr3_3:17109295-17109314 Msa0444210:intron 50.0%
TGGGATTGTGGGAATTGGGA+AGG - chr3_3:17110181-17110200 None:intergenic 50.0%
CACGTGGGATTGTGGGAATT+GGG - chr3_3:17110185-17110204 None:intergenic 50.0%
ACACGTGGGATTGTGGGAAT+TGG - chr3_3:17110186-17110205 None:intergenic 50.0%
CCAAAGAACACGACTCTTGG+CGG + chr3_3:17110576-17110595 Msa0444210:intron 50.0%
GAGCGGTGAAGTAAGTCAAG+GGG - chr3_3:17110866-17110885 None:intergenic 50.0%
CCAAAGAACACGACTCTTGG+TGG - chr3_3:17110576-17110595 None:intergenic 50.0%
CCACCAAGAGTCGTGTTCTT+TGG + chr3_3:17111066-17111085 Msa0444210:intron 50.0%
ACACCAGCATTCGTGGGTTT+AGG + chr3_3:17111433-17111452 Msa0444210:intron 50.0%
CAACCTAAACCCACGAATGC+TGG - chr3_3:17111439-17111458 None:intergenic 50.0%
CGCAACGGGAAACGGTTACA+AGG - chr3_3:17104244-17104263 None:intergenic 55.0%
CTACAAGGCGCAACGGGAAA+CGG - chr3_3:17104252-17104271 None:intergenic 55.0%
! AAGTCTCAGGGGCGTGGTAA+AGG + chr3_3:17105243-17105262 Msa0444210:intron 55.0%
GGAAGAAGGAGTGGTGTAGC+TGG - chr3_3:17105556-17105575 None:intergenic 55.0%
ACGTTCCTTGGAGGAAGACG+TGG + chr3_3:17109265-17109284 Msa0444210:intron 55.0%
TGCCTGACGAAGATGGCCAT+TGG - chr3_3:17109300-17109319 None:intergenic 55.0%
CCGCCAAGAGTCGTGTTCTT+TGG - chr3_3:17110579-17110598 None:intergenic 55.0%
TGGCTTACTTCGCCGCTCAT+AGG - chr3_3:17110783-17110802 None:intergenic 55.0%
ATGAGCGGCGAAGTAAGCCA+AGG + chr3_3:17110783-17110802 Msa0444210:intron 55.0%
TGAGCGGCGAAGTAAGCCAA+GGG + chr3_3:17110784-17110803 Msa0444210:intron 55.0%
GCAAGAAAGTCTCAGGGGCG+TGG + chr3_3:17105237-17105256 Msa0444210:intron 60.0%
! TCTCAGGGGCGTGGTAAAGG+TGG + chr3_3:17105246-17105265 Msa0444210:intron 60.0%
GGTAGCCACGTCTTCCTCCA+AGG - chr3_3:17109273-17109292 None:intergenic 60.0%
! GGAGCAGCTTTTGGTGGGGT+TGG + chr3_3:17109502-17109521 Msa0444210:intron 60.0%
GAGCGGCGAAGTAAGCCAAG+GGG + chr3_3:17110785-17110804 Msa0444210:intron 60.0%
!! TGCAGACTGGGCTGGCTGTG+TGG + chr3_3:17108377-17108396 Msa0444210:intron 65.0%
!! GGGCTGGCTGTGTGGATAGC+AGG + chr3_3:17108385-17108404 Msa0444210:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 17102635 17111556 17102635 ID=Msa0444210;Name=Msa0444210
chr3_3 mRNA 17102635 17111556 17102635 ID=Msa0444210-mRNA-1;Parent=Msa0444210;Name=Msa0444210-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|0|0|0.75|0.33|0.5|4|0|135
chr3_3 exon 17102635 17102707 17102635 ID=Msa0444210-mRNA-1:exon:3573;Parent=Msa0444210-mRNA-1
chr3_3 exon 17103394 17103539 17103394 ID=Msa0444210-mRNA-1:exon:3574;Parent=Msa0444210-mRNA-1
chr3_3 exon 17109098 17109266 17109098 ID=Msa0444210-mRNA-1:exon:3575;Parent=Msa0444210-mRNA-1
chr3_3 exon 17111537 17111556 17111537 ID=Msa0444210-mRNA-1:exon:3576;Parent=Msa0444210-mRNA-1
chr3_3 CDS 17102635 17102707 17102635 ID=Msa0444210-mRNA-1:cds;Parent=Msa0444210-mRNA-1
chr3_3 CDS 17103394 17103539 17103394 ID=Msa0444210-mRNA-1:cds;Parent=Msa0444210-mRNA-1
chr3_3 CDS 17109098 17109266 17109098 ID=Msa0444210-mRNA-1:cds;Parent=Msa0444210-mRNA-1
chr3_3 CDS 17111537 17111556 17111537 ID=Msa0444210-mRNA-1:cds;Parent=Msa0444210-mRNA-1
Gene Sequence

>Msa0444210

ATGGCTTCCCTTATTGCTCCTTCCAACCACTCTCCAGTTGAAGATGCAGAAGCTCTTCAAAGGGCTGTTAAAGGTTGGGGAGCTGATGAAAAAGCCATTATAGCAATATTAGGTCATAGAAATGCTACCCAAAGGACTCAAATCAGACAAGCATACTATGAACTCTATCAAGAGGATCTCATCAAACGTCTTGAGTCTGAGCTTTCAGGTGATTTTGAGAGAGCAATGTATAGATGGATATTGGAACCAGCAGAACGTGAAGCTTTGTTGGCAAATATAGCACTAAGAAATGCAAACATAAACTATCATGTGATTGTGGAAATTTCATGTGTCTCTTCACCTGATGAACTTTTCAATTTGAGACGTGCTTATCACAATCGATATAAACTTCTTGGCGGAAAATGGTGA

Protein sequence

>Msa0444210

MASLIAPSNHSPVEDAEALQRAVKGWGADEKAIIAILGHRNATQRTQIRQAYYELYQEDLIKRLESELSGDFERAMYRWILEPAEREALLANIALRNANINYHVIVEISCVSSPDELFNLRRAYHNRYKLLGGKW*