Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0593600 | XP_013455077.1 | 99.018 | 509 | 5 | 0 | 1 | 509 | 1 | 509 | 0.0 | 1045 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0593600 | sp|O04887|PME2_CITSI | 69.650 | 514 | 147 | 5 | 1 | 509 | 1 | 510 | 0.0 | 741 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0030050 | Msa0593600 | 0.806188 | 9.285873e-50 | -8.615850e-47 |
Msa0037720 | Msa0593600 | 0.820380 | 7.071369e-53 | -8.615850e-47 |
Msa0040210 | Msa0593600 | 0.811303 | 7.490143e-51 | -8.615850e-47 |
Msa0046680 | Msa0593600 | 0.808833 | 2.549682e-50 | -8.615850e-47 |
Msa0051730 | Msa0593600 | 0.803279 | 3.760811e-49 | -8.615850e-47 |
Msa0055030 | Msa0593600 | 0.800176 | 1.629333e-48 | -8.615850e-47 |
Msa0064990 | Msa0593600 | 0.802359 | 5.825226e-49 | -8.615850e-47 |
Msa0076640 | Msa0593600 | 0.828955 | 6.742228e-55 | -8.615850e-47 |
Msa0081700 | Msa0593600 | -0.818029 | 2.425277e-52 | -8.615850e-47 |
Msa0092220 | Msa0593600 | 0.816370 | 5.727271e-52 | -8.615850e-47 |
Msa0093740 | Msa0593600 | 0.821511 | 3.883924e-53 | -8.615850e-47 |
Msa0099090 | Msa0593600 | -0.801165 | 1.024021e-48 | -8.615850e-47 |
Msa0099350 | Msa0593600 | -0.815610 | 8.464115e-52 | -8.615850e-47 |
Msa0099430 | Msa0593600 | -0.816851 | 4.468165e-52 | -8.615850e-47 |
Msa0127910 | Msa0593600 | -0.802422 | 5.653144e-49 | -8.615850e-47 |
Msa0138870 | Msa0593600 | 0.823731 | 1.182733e-53 | -8.615850e-47 |
Msa0146090 | Msa0593600 | 0.816325 | 5.860904e-52 | -8.615850e-47 |
Msa0146210 | Msa0593600 | 0.812322 | 4.493614e-51 | -8.615850e-47 |
Msa0148000 | Msa0593600 | -0.852030 | 6.029228e-61 | -8.615850e-47 |
Msa0200090 | Msa0593600 | 0.814056 | 1.871137e-51 | -8.615850e-47 |
Msa0214800 | Msa0593600 | 0.806925 | 6.492538e-50 | -8.615850e-47 |
Msa0223590 | Msa0593600 | 0.816919 | 4.315079e-52 | -8.615850e-47 |
Msa0224200 | Msa0593600 | 0.812527 | 4.053891e-51 | -8.615850e-47 |
Msa0224210 | Msa0593600 | 0.861531 | 9.612689e-64 | -8.615850e-47 |
Msa0231850 | Msa0593600 | 0.823237 | 1.543362e-53 | -8.615850e-47 |
Msa0368620 | Msa0593600 | 0.802808 | 4.704928e-49 | -8.615850e-47 |
Msa0386890 | Msa0593600 | 0.807130 | 5.873557e-50 | -8.615850e-47 |
Msa0389710 | Msa0593600 | 0.802963 | 4.371023e-49 | -8.615850e-47 |
Msa0390590 | Msa0593600 | -0.803339 | 3.654897e-49 | -8.615850e-47 |
Msa0390790 | Msa0593600 | 0.868527 | 6.112353e-66 | -8.615850e-47 |
Msa0398770 | Msa0593600 | 0.806726 | 7.152353e-50 | -8.615850e-47 |
Msa0413130 | Msa0593600 | 0.813283 | 2.768395e-51 | -8.615850e-47 |
Msa0416040 | Msa0593600 | 0.817523 | 3.154725e-52 | -8.615850e-47 |
Msa0421080 | Msa0593600 | 0.804179 | 2.446098e-49 | -8.615850e-47 |
Msa0430320 | Msa0593600 | 0.806910 | 6.539630e-50 | -8.615850e-47 |
Msa0458220 | Msa0593600 | 0.803015 | 4.265026e-49 | -8.615850e-47 |
Msa0466850 | Msa0593600 | 0.808432 | 3.106655e-50 | -8.615850e-47 |
Msa0480260 | Msa0593600 | 0.802677 | 5.007596e-49 | -8.615850e-47 |
Msa0480530 | Msa0593600 | 0.825079 | 5.698903e-54 | -8.615850e-47 |
Msa0480540 | Msa0593600 | 0.803656 | 3.142094e-49 | -8.615850e-47 |
Msa0480550 | Msa0593600 | 0.811469 | 6.894630e-51 | -8.615850e-47 |
Msa0242720 | Msa0593600 | 0.805976 | 1.028934e-49 | -8.615850e-47 |
Msa0246020 | Msa0593600 | 0.803774 | 2.968607e-49 | -8.615850e-47 |
Msa0246140 | Msa0593600 | 0.812579 | 3.948403e-51 | -8.615850e-47 |
Msa0264890 | Msa0593600 | 0.812388 | 4.347278e-51 | -8.615850e-47 |
Msa0294200 | Msa0593600 | 0.808397 | 3.160469e-50 | -8.615850e-47 |
Msa0309920 | Msa0593600 | 0.819326 | 1.231429e-52 | -8.615850e-47 |
Msa0332360 | Msa0593600 | 0.800050 | 1.728509e-48 | -8.615850e-47 |
Msa0336680 | Msa0593600 | 0.812467 | 4.177698e-51 | -8.615850e-47 |
Msa0340270 | Msa0593600 | 0.804533 | 2.063398e-49 | -8.615850e-47 |
Msa0484410 | Msa0593600 | 0.829839 | 4.112626e-55 | -8.615850e-47 |
Msa0489070 | Msa0593600 | 0.800092 | 1.695127e-48 | -8.615850e-47 |
Msa0508160 | Msa0593600 | 0.819200 | 1.316007e-52 | -8.615850e-47 |
Msa0513670 | Msa0593600 | 0.813622 | 2.331426e-51 | -8.615850e-47 |
Msa0537210 | Msa0593600 | 0.908663 | 1.336556e-81 | -8.615850e-47 |
Msa0546880 | Msa0593600 | 0.832233 | 1.062509e-55 | -8.615850e-47 |
Msa0557230 | Msa0593600 | 0.801468 | 8.878137e-49 | -8.615850e-47 |
Msa0560280 | Msa0593600 | 0.840208 | 9.986326e-58 | -8.615850e-47 |
Msa0561110 | Msa0593600 | 0.827733 | 1.328746e-54 | -8.615850e-47 |
Msa0566930 | Msa0593600 | 0.810030 | 1.411301e-50 | -8.615850e-47 |
Msa0569100 | Msa0593600 | 0.805802 | 1.119535e-49 | -8.615850e-47 |
Msa0580210 | Msa0593600 | 0.833145 | 6.310222e-56 | -8.615850e-47 |
Msa0584370 | Msa0593600 | 0.803514 | 3.362148e-49 | -8.615850e-47 |
Msa0588880 | Msa0593600 | 0.832795 | 7.709363e-56 | -8.615850e-47 |
Msa0593600 | Msa0614290 | 0.822182 | 2.715587e-53 | -8.615850e-47 |
Msa0593600 | Msa0614480 | 0.805020 | 1.632902e-49 | -8.615850e-47 |
Msa0593600 | Msa0633630 | 0.947333 | 8.251200e-106 | -8.615850e-47 |
Msa0593600 | Msa0638820 | 0.812656 | 3.799412e-51 | -8.615850e-47 |
Msa0593600 | Msa0652580 | 0.831884 | 1.295968e-55 | -8.615850e-47 |
Msa0593600 | Msa0661040 | -0.800465 | 1.423081e-48 | -8.615850e-47 |
Msa0593600 | Msa0672090 | 0.886692 | 2.741091e-72 | -8.615850e-47 |
Msa0593600 | Msa0686810 | 0.819871 | 9.247934e-53 | -8.615850e-47 |
Msa0593600 | Msa0695630 | 0.815364 | 9.602499e-52 | -8.615850e-47 |
Msa0593600 | Msa0697510 | 0.819802 | 9.593559e-53 | -8.615850e-47 |
Msa0593600 | Msa0697520 | 0.826582 | 2.506347e-54 | -8.615850e-47 |
Msa0593600 | Msa0701430 | 0.802789 | 4.749408e-49 | -8.615850e-47 |
Msa0593600 | Msa0705520 | 0.840453 | 8.616131e-58 | -8.615850e-47 |
Msa0593600 | Msa0727230 | 0.802187 | 6.320299e-49 | -8.615850e-47 |
Msa0593600 | Msa0741170 | 0.801665 | 8.089209e-49 | -8.615850e-47 |
Msa0593600 | Msa0744540 | 0.830495 | 2.844409e-55 | -8.615850e-47 |
Msa0593600 | Msa0744550 | 0.810379 | 1.186668e-50 | -8.615850e-47 |
Msa0593600 | Msa0744560 | 0.815420 | 9.329548e-52 | -8.615850e-47 |
Msa0593600 | Msa0753500 | 0.820664 | 6.086679e-53 | -8.615850e-47 |
Msa0593600 | Msa0754750 | 0.820794 | 5.683376e-53 | -8.615850e-47 |
Msa0593600 | Msa0781800 | 0.809955 | 1.465215e-50 | -8.615850e-47 |
Msa0593600 | Msa0789220 | 0.804363 | 2.239830e-49 | -8.615850e-47 |
Msa0593600 | Msa0795210 | 0.830394 | 3.010196e-55 | -8.615850e-47 |
Msa0593600 | Msa0806910 | 0.819032 | 1.436942e-52 | -8.615850e-47 |
Msa0593600 | Msa0815650 | 0.822771 | 1.982150e-53 | -8.615850e-47 |
Msa0593600 | Msa0823380 | 0.804478 | 2.119036e-49 | -8.615850e-47 |
Msa0593600 | Msa0826360 | 0.834852 | 2.358104e-56 | -8.615850e-47 |
Msa0593600 | Msa0826370 | 0.834062 | 3.725064e-56 | -8.615850e-47 |
Msa0593600 | Msa0826380 | 0.824855 | 6.438493e-54 | -8.615850e-47 |
Msa0593600 | Msa0826450 | 0.830379 | 3.036361e-55 | -8.615850e-47 |
Msa0593600 | Msa0828350 | 0.808043 | 3.760028e-50 | -8.615850e-47 |
Msa0593600 | Msa0832750 | 0.826331 | 2.876653e-54 | -8.615850e-47 |
Msa0593600 | Msa0843740 | 0.803223 | 3.861716e-49 | -8.615850e-47 |
Msa0593600 | Msa0861820 | 0.805964 | 1.035357e-49 | -8.615850e-47 |
Msa0593600 | Msa0865810 | 0.833391 | 5.479282e-56 | -8.615850e-47 |
Msa0593600 | Msa0865830 | 0.813358 | 2.665035e-51 | -8.615850e-47 |
Msa0593600 | Msa0869660 | 0.812085 | 5.063420e-51 | -8.615850e-47 |
Msa0593600 | Msa0914710 | 0.801439 | 8.999862e-49 | -8.615850e-47 |
Msa0593600 | Msa0945320 | 0.808215 | 3.454829e-50 | -8.615850e-47 |
Msa0593600 | Msa0982560 | 0.830663 | 2.586711e-55 | -8.615850e-47 |
Msa0593600 | Msa1018210 | -0.823593 | 1.274124e-53 | -8.615850e-47 |
Msa0593600 | Msa1041250 | 0.804717 | 1.889303e-49 | -8.615850e-47 |
Msa0593600 | Msa1041260 | 0.808018 | 3.804943e-50 | -8.615850e-47 |
Msa0593600 | Msa1090150 | 0.831748 | 1.400331e-55 | -8.615850e-47 |
Msa0593600 | Msa1120560 | 0.806261 | 8.964126e-50 | -8.615850e-47 |
Msa0593600 | Msa1157200 | 0.844228 | 8.609256e-59 | -8.615850e-47 |
Msa0593600 | Msa1165660 | 0.806761 | 7.032166e-50 | -8.615850e-47 |
Msa0593600 | Msa1171510 | 0.809709 | 1.654817e-50 | -8.615850e-47 |
Msa0593600 | Msa1174280 | 0.814008 | 1.917642e-51 | -8.615850e-47 |
Msa0593600 | Msa1179340 | 0.835087 | 2.058023e-56 | -8.615850e-47 |
Msa0593600 | Msa1218190 | 0.826789 | 2.236527e-54 | -8.615850e-47 |
Msa0593600 | Msa1233090 | 0.821765 | 3.392310e-53 | -8.615850e-47 |
Msa0593600 | Msa1275220 | 0.847438 | 1.156583e-59 | -8.615850e-47 |
Msa0593600 | Msa1309040 | 0.805211 | 1.489495e-49 | -8.615850e-47 |
Msa0593600 | Msa1313720 | 0.842686 | 2.222329e-58 | -8.615850e-47 |
Msa0593600 | Msa1344930 | 0.823047 | 1.708918e-53 | -8.615850e-47 |
Msa0593600 | Msa1349830 | 0.805442 | 1.332590e-49 | -8.615850e-47 |
Msa0593600 | Msa1361040 | 0.804559 | 2.038251e-49 | -8.615850e-47 |
Msa0593600 | Msa1366480 | 0.805628 | 1.218036e-49 | -8.615850e-47 |
Msa0593600 | Msa1368400 | 0.806983 | 6.310081e-50 | -8.615850e-47 |
Msa0593600 | Msa1373990 | 0.812033 | 5.195989e-51 | -8.615850e-47 |
Msa0593600 | Msa1375640 | 0.818372 | 2.029258e-52 | -8.615850e-47 |
Msa0593600 | Msa1398120 | 0.822888 | 1.861752e-53 | -8.615850e-47 |
Msa0593600 | Msa1401110 | 0.812695 | 3.724595e-51 | -8.615850e-47 |
Msa0593600 | Msa1414340 | 0.822545 | 2.236772e-53 | -8.615850e-47 |
Msa0593600 | Msa1419700 | 0.812998 | 3.197178e-51 | -8.615850e-47 |
Msa0593600 | Msa1459920 | 0.806790 | 6.933071e-50 | -8.615850e-47 |
Msa0593600 | Msa1459930 | 0.812542 | 4.022978e-51 | -8.615850e-47 |
Msa0593600 | Msa1466530 | 0.800836 | 1.195702e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0593600 | MtrunA17_Chr4g0011791 | 99.018 | 509 | 5 | 0 | 1 | 509 | 1 | 509 | 0.0 | 1045 |
Msa0593600 | MtrunA17_Chr4g0011771 | 73.450 | 516 | 127 | 6 | 1 | 509 | 1 | 513 | 0.0 | 776 |
Msa0593600 | MtrunA17_Chr8g0391311 | 49.438 | 534 | 229 | 13 | 7 | 509 | 18 | 541 | 1.30e-176 | 508 |
Msa0593600 | MtrunA17_Chr8g0391291 | 49.438 | 534 | 229 | 13 | 7 | 509 | 16 | 539 | 2.03e-176 | 507 |
Msa0593600 | MtrunA17_Chr4g0018371 | 50.297 | 505 | 226 | 10 | 29 | 509 | 36 | 539 | 3.27e-170 | 491 |
Msa0593600 | MtrunA17_Chr3g0090091 | 50.099 | 507 | 229 | 11 | 23 | 509 | 26 | 528 | 8.65e-167 | 482 |
Msa0593600 | MtrunA17_Chr3g0079361 | 49.143 | 525 | 239 | 14 | 9 | 509 | 7 | 527 | 7.92e-164 | 474 |
Msa0593600 | MtrunA17_Chr3g0079341 | 48.015 | 529 | 246 | 13 | 6 | 509 | 3 | 527 | 9.33e-164 | 474 |
Msa0593600 | MtrunA17_Chr3g0079351 | 49.605 | 506 | 232 | 12 | 23 | 509 | 26 | 527 | 1.13e-162 | 471 |
Msa0593600 | MtrunA17_Chr7g0269541 | 47.339 | 545 | 246 | 13 | 1 | 505 | 9 | 552 | 1.05e-160 | 468 |
Msa0593600 | MtrunA17_Chr7g0233771 | 46.589 | 513 | 243 | 11 | 24 | 509 | 46 | 554 | 2.10e-147 | 433 |
Msa0593600 | MtrunA17_Chr8g0345281 | 46.869 | 527 | 229 | 14 | 29 | 509 | 68 | 589 | 4.26e-146 | 431 |
Msa0593600 | MtrunA17_Chr4g0011751 | 51.740 | 431 | 186 | 9 | 95 | 509 | 65 | 489 | 6.58e-144 | 422 |
Msa0593600 | MtrunA17_Chr7g0233831 | 44.527 | 539 | 257 | 15 | 1 | 509 | 29 | 555 | 2.58e-142 | 421 |
Msa0593600 | MtrunA17_Chr7g0272141 | 49.443 | 449 | 189 | 10 | 91 | 509 | 102 | 542 | 3.27e-142 | 420 |
Msa0593600 | MtrunA17_Chr1g0192331 | 46.067 | 534 | 242 | 14 | 6 | 509 | 11 | 528 | 2.25e-141 | 417 |
Msa0593600 | MtrunA17_Chr4g0069841 | 51.025 | 439 | 183 | 9 | 95 | 509 | 86 | 516 | 3.90e-141 | 416 |
Msa0593600 | MtrunA17_Chr3g0126771 | 43.321 | 524 | 252 | 11 | 28 | 509 | 77 | 597 | 5.91e-140 | 416 |
Msa0593600 | MtrunA17_Chr2g0302021 | 50.228 | 438 | 191 | 8 | 95 | 509 | 92 | 525 | 2.57e-139 | 412 |
Msa0593600 | MtrunA17_Chr1g0195301 | 46.241 | 532 | 223 | 16 | 33 | 509 | 32 | 555 | 6.14e-139 | 412 |
Msa0593600 | MtrunA17_Chr1g0195321 | 46.241 | 532 | 223 | 16 | 33 | 509 | 32 | 555 | 6.14e-139 | 412 |
Msa0593600 | MtrunA17_Chr1g0195331 | 46.429 | 532 | 222 | 16 | 33 | 509 | 32 | 555 | 9.27e-139 | 411 |
Msa0593600 | MtrunA17_Chr1g0175661 | 50.108 | 465 | 180 | 14 | 95 | 509 | 96 | 558 | 2.11e-137 | 408 |
Msa0593600 | MtrunA17_Chr1g0147051 | 42.115 | 539 | 263 | 12 | 18 | 509 | 71 | 607 | 3.26e-137 | 409 |
Msa0593600 | MtrunA17_Chr7g0233801 | 44.574 | 516 | 248 | 14 | 24 | 509 | 46 | 553 | 1.07e-136 | 406 |
Msa0593600 | MtrunA17_Chr1g0195351 | 45.865 | 532 | 223 | 17 | 33 | 509 | 32 | 553 | 9.50e-135 | 401 |
Msa0593600 | MtrunA17_Chr7g0269531 | 44.906 | 530 | 232 | 15 | 33 | 509 | 43 | 565 | 2.11e-134 | 400 |
Msa0593600 | MtrunA17_Chr3g0080391 | 44.660 | 515 | 244 | 12 | 27 | 509 | 69 | 574 | 7.09e-134 | 399 |
Msa0593600 | MtrunA17_Chr8g0354901 | 45.703 | 512 | 245 | 15 | 27 | 509 | 74 | 581 | 2.44e-131 | 393 |
Msa0593600 | MtrunA17_Chr7g0269511 | 44.925 | 532 | 229 | 16 | 33 | 509 | 42 | 564 | 2.97e-131 | 392 |
Msa0593600 | MtrunA17_Chr7g0269521 | 43.609 | 532 | 242 | 13 | 30 | 509 | 37 | 562 | 1.86e-128 | 385 |
Msa0593600 | MtrunA17_Chr8g0354911 | 43.327 | 547 | 228 | 15 | 33 | 509 | 78 | 612 | 4.24e-128 | 386 |
Msa0593600 | MtrunA17_Chr4g0069881 | 43.701 | 508 | 253 | 14 | 26 | 509 | 37 | 535 | 1.66e-127 | 382 |
Msa0593600 | MtrunA17_Chr4g0069861 | 45.475 | 442 | 207 | 8 | 95 | 509 | 83 | 517 | 3.87e-125 | 375 |
Msa0593600 | MtrunA17_Chr4g0069891 | 40.952 | 525 | 266 | 13 | 23 | 509 | 75 | 593 | 5.20e-123 | 372 |
Msa0593600 | MtrunA17_Chr1g0195311 | 64.639 | 263 | 89 | 3 | 250 | 509 | 53 | 314 | 2.23e-120 | 355 |
Msa0593600 | MtrunA17_Chr3g0080381 | 41.989 | 543 | 243 | 17 | 33 | 509 | 92 | 628 | 1.15e-117 | 360 |
Msa0593600 | MtrunA17_Chr1g0194091 | 40.812 | 468 | 228 | 10 | 90 | 509 | 103 | 569 | 3.60e-112 | 343 |
Msa0593600 | MtrunA17_Chr1g0192321 | 38.390 | 534 | 276 | 14 | 25 | 508 | 52 | 582 | 2.77e-111 | 342 |
Msa0593600 | MtrunA17_Chr8g0345211 | 39.258 | 512 | 278 | 11 | 27 | 509 | 75 | 582 | 2.17e-107 | 332 |
Msa0593600 | MtrunA17_Chr1g0192311 | 35.674 | 527 | 279 | 13 | 25 | 505 | 54 | 566 | 1.56e-104 | 324 |
Msa0593600 | MtrunA17_Chr1g0192281 | 35.674 | 527 | 279 | 13 | 25 | 505 | 54 | 566 | 1.56e-104 | 324 |
Msa0593600 | MtrunA17_Chr7g0272151 | 37.406 | 532 | 281 | 16 | 25 | 508 | 55 | 582 | 2.35e-103 | 322 |
Msa0593600 | MtrunA17_Chr1g0194081 | 38.618 | 492 | 259 | 13 | 59 | 509 | 74 | 563 | 8.96e-102 | 317 |
Msa0593600 | MtrunA17_Chr3g0129921 | 37.091 | 550 | 291 | 17 | 7 | 508 | 21 | 563 | 1.41e-101 | 316 |
Msa0593600 | MtrunA17_Chr8g0384121 | 38.477 | 512 | 263 | 14 | 27 | 498 | 54 | 553 | 1.04e-100 | 314 |
Msa0593600 | MtrunA17_Chr7g0270691 | 37.812 | 521 | 274 | 16 | 29 | 509 | 39 | 549 | 6.23e-100 | 311 |
Msa0593600 | MtrunA17_Chr7g0270661 | 39.700 | 466 | 225 | 10 | 93 | 504 | 106 | 569 | 1.92e-99 | 311 |
Msa0593600 | MtrunA17_Chr7g0270671 | 39.700 | 466 | 225 | 10 | 93 | 504 | 106 | 569 | 1.92e-99 | 311 |
Msa0593600 | MtrunA17_Chr1g0192301 | 34.690 | 516 | 299 | 12 | 25 | 505 | 59 | 571 | 6.20e-99 | 310 |
Msa0593600 | MtrunA17_Chr4g0000121 | 34.345 | 527 | 286 | 13 | 25 | 505 | 41 | 553 | 2.77e-98 | 308 |
Msa0593600 | MtrunA17_Chr7g0270651 | 37.792 | 471 | 237 | 11 | 93 | 509 | 106 | 574 | 1.12e-96 | 304 |
Msa0593600 | MtrunA17_Chr7g0234711 | 61.842 | 228 | 83 | 3 | 286 | 509 | 42 | 269 | 4.19e-96 | 292 |
Msa0593600 | MtrunA17_Chr2g0302001 | 47.368 | 323 | 158 | 6 | 191 | 509 | 123 | 437 | 2.13e-95 | 296 |
Msa0593600 | MtrunA17_Chr4g0067611 | 35.238 | 525 | 291 | 14 | 25 | 508 | 55 | 571 | 1.84e-92 | 293 |
Msa0593600 | MtrunA17_Chr2g0301931 | 49.291 | 282 | 137 | 5 | 231 | 509 | 14 | 292 | 4.24e-91 | 280 |
Msa0593600 | MtrunA17_Chr2g0295551 | 35.135 | 518 | 296 | 14 | 25 | 508 | 52 | 563 | 8.30e-91 | 288 |
Msa0593600 | MtrunA17_Chr4g0067601 | 34.549 | 521 | 292 | 13 | 29 | 508 | 59 | 571 | 4.71e-90 | 286 |
Msa0593600 | MtrunA17_Chr7g0270631 | 37.838 | 444 | 229 | 8 | 93 | 489 | 94 | 537 | 7.99e-89 | 295 |
Msa0593600 | MtrunA17_Chr7g0270631 | 36.484 | 455 | 224 | 11 | 93 | 487 | 642 | 1091 | 5.48e-77 | 262 |
Msa0593600 | MtrunA17_Chr2g0295531 | 32.448 | 527 | 325 | 12 | 7 | 506 | 21 | 543 | 1.59e-88 | 283 |
Msa0593600 | MtrunA17_Chr2g0295541 | 33.333 | 549 | 295 | 15 | 25 | 508 | 52 | 594 | 4.30e-85 | 274 |
Msa0593600 | MtrunA17_Chr8g0380581 | 43.917 | 337 | 169 | 10 | 182 | 506 | 45 | 373 | 1.01e-83 | 264 |
Msa0593600 | MtrunA17_Chr5g0437831 | 40.762 | 341 | 189 | 8 | 179 | 509 | 46 | 383 | 1.17e-77 | 248 |
Msa0593600 | MtrunA17_Chr7g0268241 | 40.557 | 323 | 176 | 7 | 193 | 509 | 38 | 350 | 8.08e-72 | 232 |
Msa0593600 | MtrunA17_Chr2g0334111 | 40.705 | 312 | 167 | 7 | 204 | 509 | 24 | 323 | 7.04e-71 | 229 |
Msa0593600 | MtrunA17_Chr7g0271381 | 30.156 | 514 | 317 | 16 | 25 | 509 | 56 | 556 | 1.96e-67 | 226 |
Msa0593600 | MtrunA17_Chr8g0391261 | 63.235 | 136 | 48 | 1 | 376 | 509 | 31 | 166 | 1.43e-56 | 186 |
Msa0593600 | MtrunA17_Chr7g0234731 | 40.146 | 274 | 145 | 9 | 23 | 281 | 45 | 314 | 2.20e-54 | 185 |
Msa0593600 | MtrunA17_Chr6g0487101 | 39.735 | 302 | 152 | 9 | 213 | 498 | 93 | 380 | 3.70e-51 | 179 |
Msa0593600 | MtrunA17_Chr8g0391281 | 35.974 | 303 | 156 | 11 | 7 | 281 | 16 | 308 | 7.27e-51 | 176 |
Msa0593600 | MtrunA17_Chr6g0453551 | 35.644 | 303 | 167 | 9 | 205 | 492 | 6 | 295 | 2.59e-49 | 172 |
Msa0593600 | MtrunA17_Chr8g0389771 | 37.419 | 310 | 164 | 9 | 206 | 498 | 81 | 377 | 2.72e-49 | 174 |
Msa0593600 | MtrunA17_Chr6g0466951 | 34.296 | 277 | 159 | 7 | 203 | 471 | 67 | 328 | 3.25e-45 | 162 |
Msa0593600 | MtrunA17_Chr7g0217941 | 34.448 | 299 | 172 | 7 | 207 | 492 | 8 | 295 | 5.80e-45 | 160 |
Msa0593600 | MtrunA17_Chr2g0299431 | 42.918 | 233 | 126 | 5 | 179 | 406 | 28 | 258 | 1.02e-44 | 159 |
Msa0593600 | MtrunA17_Chr1g0194311 | 32.919 | 322 | 189 | 8 | 190 | 498 | 61 | 368 | 4.99e-44 | 159 |
Msa0593600 | MtrunA17_Chr7g0258341 | 32.132 | 333 | 194 | 9 | 180 | 498 | 73 | 387 | 1.84e-43 | 158 |
Msa0593600 | MtrunA17_Chr6g0466961 | 34.545 | 275 | 157 | 6 | 205 | 471 | 40 | 299 | 5.70e-42 | 152 |
Msa0593600 | MtrunA17_Chr2g0294321 | 31.746 | 315 | 192 | 8 | 194 | 498 | 45 | 346 | 1.75e-40 | 149 |
Msa0593600 | MtrunA17_Chr1g0161731 | 30.892 | 314 | 186 | 8 | 200 | 502 | 44 | 337 | 7.67e-39 | 144 |
Msa0593600 | MtrunA17_Chr5g0446301 | 33.225 | 307 | 170 | 8 | 211 | 498 | 67 | 357 | 1.79e-37 | 141 |
Msa0593600 | MtrunA17_Chr4g0070051 | 31.889 | 323 | 185 | 11 | 193 | 498 | 39 | 343 | 6.66e-36 | 136 |
Msa0593600 | MtrunA17_Chr2g0295851 | 31.803 | 305 | 174 | 11 | 205 | 498 | 55 | 336 | 4.16e-34 | 131 |
Msa0593600 | MtrunA17_Chr5g0399221 | 29.808 | 312 | 192 | 8 | 205 | 501 | 63 | 362 | 4.35e-33 | 129 |
Msa0593600 | MtrunA17_Chr7g0265201 | 30.492 | 305 | 183 | 7 | 207 | 500 | 101 | 387 | 1.93e-31 | 125 |
Msa0593600 | MtrunA17_Chr5g0440871 | 29.195 | 298 | 193 | 6 | 205 | 500 | 39 | 320 | 2.87e-31 | 123 |
Msa0593600 | MtrunA17_Chr4g0037751 | 29.063 | 320 | 193 | 11 | 194 | 498 | 61 | 361 | 2.93e-31 | 124 |
Msa0593600 | MtrunA17_Chr5g0437821 | 43.182 | 132 | 71 | 2 | 315 | 442 | 4 | 135 | 3.63e-31 | 117 |
Msa0593600 | MtrunA17_Chr8g0351871 | 27.541 | 305 | 195 | 6 | 205 | 498 | 33 | 322 | 5.24e-31 | 122 |
Msa0593600 | MtrunA17_Chr6g0459781 | 37.853 | 177 | 99 | 4 | 198 | 363 | 6 | 182 | 1.55e-30 | 118 |
Msa0593600 | MtrunA17_Chr5g0420831 | 28.280 | 343 | 218 | 10 | 171 | 498 | 32 | 361 | 1.90e-29 | 119 |
Msa0593600 | MtrunA17_Chr4g0025841 | 31.276 | 243 | 148 | 6 | 205 | 443 | 37 | 264 | 1.72e-24 | 102 |
Msa0593600 | MtrunA17_Chr5g0440901 | 35.099 | 151 | 89 | 3 | 294 | 443 | 1 | 143 | 6.27e-23 | 95.1 |
Msa0593600 | MtrunA17_Chr2g0314691 | 26.415 | 212 | 140 | 4 | 290 | 498 | 3 | 201 | 2.47e-21 | 92.0 |
Msa0593600 | MtrunA17_Chr7g0265161 | 31.461 | 178 | 92 | 4 | 267 | 439 | 5 | 157 | 4.14e-17 | 80.9 |
Msa0593600 | MtrunA17_Chr6g0460141 | 36.567 | 134 | 75 | 3 | 232 | 355 | 5 | 138 | 5.03e-16 | 75.5 |
Msa0593600 | MtrunA17_Chr5g0440891 | 32.692 | 156 | 93 | 5 | 205 | 356 | 48 | 195 | 1.71e-14 | 72.4 |
Msa0593600 | MtrunA17_Chr6g0459791 | 37.398 | 123 | 66 | 4 | 377 | 498 | 4 | 116 | 5.53e-14 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0593600 | AT2G45220.1 | 66.732 | 514 | 162 | 6 | 1 | 509 | 2 | 511 | 0.0 | 709 |
Msa0593600 | AT5G51490.1 | 52.183 | 504 | 211 | 10 | 32 | 509 | 37 | 536 | 1.77e-176 | 507 |
Msa0593600 | AT5G51500.1 | 50.690 | 507 | 224 | 9 | 27 | 509 | 36 | 540 | 5.98e-168 | 486 |
Msa0593600 | AT3G47400.1 | 49.213 | 508 | 228 | 10 | 32 | 509 | 87 | 594 | 3.37e-163 | 476 |
Msa0593600 | AT4G00190.1 | 49.691 | 485 | 218 | 8 | 33 | 509 | 8 | 474 | 6.03e-162 | 468 |
Msa0593600 | AT1G23200.1 | 46.140 | 544 | 231 | 13 | 19 | 509 | 20 | 554 | 9.14e-158 | 460 |
Msa0593600 | AT3G49220.1 | 44.727 | 512 | 252 | 9 | 28 | 509 | 86 | 596 | 2.91e-142 | 422 |
Msa0593600 | AT3G49220.3 | 44.727 | 512 | 252 | 9 | 28 | 509 | 131 | 641 | 7.63e-142 | 422 |
Msa0593600 | AT3G59010.1 | 51.157 | 432 | 184 | 5 | 98 | 509 | 104 | 528 | 1.68e-141 | 418 |
Msa0593600 | AT1G11580.1 | 46.351 | 507 | 250 | 10 | 25 | 509 | 51 | 557 | 2.29e-141 | 419 |
Msa0593600 | AT5G53370.1 | 44.250 | 513 | 254 | 8 | 28 | 509 | 74 | 585 | 2.64e-141 | 419 |
Msa0593600 | AT5G53370.2 | 44.250 | 513 | 254 | 8 | 28 | 509 | 110 | 621 | 3.26e-141 | 420 |
Msa0593600 | AT1G11580.2 | 46.351 | 507 | 250 | 10 | 25 | 509 | 72 | 578 | 6.58e-141 | 418 |
Msa0593600 | AT3G14310.1 | 44.917 | 541 | 239 | 13 | 25 | 509 | 55 | 592 | 1.19e-140 | 418 |
Msa0593600 | AT1G53830.1 | 45.000 | 540 | 244 | 13 | 19 | 509 | 52 | 587 | 5.54e-139 | 413 |
Msa0593600 | AT3G05620.1 | 46.091 | 486 | 219 | 11 | 57 | 509 | 66 | 541 | 3.15e-136 | 405 |
Msa0593600 | AT3G43270.1 | 48.107 | 449 | 196 | 9 | 95 | 509 | 80 | 525 | 1.23e-135 | 403 |
Msa0593600 | AT4G02320.1 | 47.661 | 449 | 206 | 10 | 89 | 509 | 71 | 518 | 3.39e-135 | 401 |
Msa0593600 | AT3G60730.1 | 45.833 | 456 | 206 | 8 | 93 | 509 | 66 | 519 | 1.35e-132 | 395 |
Msa0593600 | AT2G43050.1 | 49.296 | 426 | 193 | 9 | 98 | 509 | 100 | 516 | 1.47e-130 | 389 |
Msa0593600 | AT4G33220.1 | 45.887 | 462 | 197 | 9 | 95 | 509 | 68 | 523 | 1.32e-129 | 387 |
Msa0593600 | AT4G02330.1 | 41.840 | 576 | 251 | 19 | 6 | 509 | 8 | 571 | 6.38e-128 | 384 |
Msa0593600 | AT2G47550.1 | 49.676 | 463 | 184 | 13 | 94 | 509 | 98 | 558 | 3.01e-127 | 382 |
Msa0593600 | AT4G02300.1 | 45.598 | 443 | 216 | 8 | 92 | 509 | 90 | 532 | 3.29e-127 | 381 |
Msa0593600 | AT1G02810.1 | 41.186 | 590 | 246 | 18 | 5 | 509 | 4 | 577 | 6.59e-126 | 380 |
Msa0593600 | AT2G26450.1 | 42.717 | 508 | 259 | 15 | 29 | 509 | 109 | 611 | 4.82e-123 | 373 |
Msa0593600 | AT4G33220.2 | 54.491 | 334 | 144 | 5 | 182 | 509 | 71 | 402 | 5.95e-123 | 366 |
Msa0593600 | AT3G05610.1 | 38.566 | 516 | 282 | 13 | 25 | 509 | 54 | 565 | 2.54e-119 | 365 |
Msa0593600 | AT5G04960.1 | 40.275 | 509 | 262 | 12 | 28 | 507 | 67 | 562 | 5.98e-119 | 361 |
Msa0593600 | AT3G10710.1 | 41.797 | 512 | 260 | 13 | 23 | 509 | 63 | 561 | 4.06e-118 | 359 |
Msa0593600 | AT5G20860.2 | 44.444 | 432 | 214 | 9 | 99 | 509 | 112 | 538 | 5.25e-118 | 358 |
Msa0593600 | AT2G26440.1 | 40.504 | 516 | 271 | 11 | 27 | 509 | 35 | 547 | 5.73e-117 | 355 |
Msa0593600 | AT3G10720.2 | 41.078 | 538 | 251 | 15 | 33 | 509 | 83 | 615 | 3.05e-116 | 356 |
Msa0593600 | AT5G49180.1 | 40.698 | 516 | 259 | 17 | 24 | 505 | 64 | 566 | 3.62e-115 | 352 |
Msa0593600 | AT5G27870.1 | 36.965 | 514 | 291 | 12 | 25 | 509 | 53 | 562 | 1.84e-113 | 352 |
Msa0593600 | AT5G04970.1 | 40.074 | 539 | 255 | 15 | 33 | 509 | 88 | 620 | 2.34e-113 | 348 |
Msa0593600 | AT4G33230.1 | 40.414 | 532 | 266 | 14 | 19 | 509 | 85 | 606 | 1.05e-112 | 347 |
Msa0593600 | AT1G53840.1 | 38.654 | 520 | 267 | 14 | 27 | 503 | 71 | 581 | 1.04e-107 | 333 |
Msa0593600 | AT1G11590.1 | 37.736 | 530 | 297 | 11 | 6 | 509 | 2 | 524 | 1.50e-107 | 330 |
Msa0593600 | AT3G06830.1 | 39.059 | 489 | 247 | 14 | 62 | 507 | 86 | 566 | 1.88e-107 | 332 |
Msa0593600 | AT4G03930.1 | 37.358 | 530 | 299 | 11 | 6 | 509 | 2 | 524 | 7.49e-106 | 326 |
Msa0593600 | AT3G27980.1 | 43.284 | 402 | 202 | 6 | 124 | 509 | 106 | 497 | 1.65e-105 | 324 |
Msa0593600 | AT3G14300.1 | 38.431 | 510 | 268 | 11 | 27 | 498 | 457 | 958 | 4.93e-104 | 333 |
Msa0593600 | AT3G10720.1 | 57.692 | 260 | 106 | 3 | 253 | 509 | 1 | 259 | 5.68e-103 | 310 |
Msa0593600 | AT4G15980.1 | 47.278 | 349 | 174 | 7 | 168 | 507 | 353 | 700 | 1.02e-100 | 318 |
Msa0593600 | AT4G15980.2 | 47.278 | 349 | 174 | 7 | 168 | 507 | 363 | 710 | 1.89e-100 | 318 |
Msa0593600 | AT5G64640.1 | 36.364 | 517 | 283 | 14 | 26 | 501 | 90 | 601 | 6.14e-97 | 305 |
Msa0593600 | AT5G09760.1 | 36.542 | 509 | 280 | 14 | 27 | 497 | 43 | 546 | 3.27e-93 | 294 |
Msa0593600 | AT5G09760.2 | 36.542 | 509 | 280 | 14 | 27 | 497 | 69 | 572 | 5.18e-93 | 295 |
Msa0593600 | AT5G20860.1 | 40.955 | 398 | 182 | 8 | 99 | 475 | 112 | 477 | 4.58e-92 | 290 |
Msa0593600 | AT2G47030.1 | 43.678 | 348 | 175 | 8 | 181 | 509 | 243 | 588 | 4.75e-82 | 266 |
Msa0593600 | AT2G47040.1 | 43.768 | 345 | 176 | 8 | 181 | 509 | 253 | 595 | 1.34e-79 | 260 |
Msa0593600 | AT3G62170.1 | 41.292 | 356 | 180 | 8 | 181 | 509 | 235 | 588 | 7.03e-78 | 255 |
Msa0593600 | AT1G11370.1 | 49.187 | 246 | 119 | 4 | 202 | 441 | 43 | 288 | 1.03e-73 | 235 |
Msa0593600 | AT5G19730.1 | 37.134 | 307 | 167 | 8 | 206 | 498 | 87 | 381 | 7.96e-48 | 170 |
Msa0593600 | AT3G29090.1 | 35.789 | 285 | 162 | 5 | 200 | 471 | 2 | 278 | 7.41e-47 | 166 |
Msa0593600 | AT1G05310.1 | 33.038 | 339 | 195 | 9 | 174 | 498 | 68 | 388 | 1.31e-43 | 159 |
Msa0593600 | AT3G17060.1 | 32.492 | 317 | 187 | 9 | 194 | 498 | 35 | 336 | 2.05e-43 | 157 |
Msa0593600 | AT2G36700.1 | 32.667 | 300 | 184 | 5 | 207 | 498 | 44 | 333 | 2.44e-43 | 157 |
Msa0593600 | AT2G36710.1 | 32.704 | 318 | 185 | 10 | 202 | 503 | 86 | 390 | 3.50e-40 | 150 |
Msa0593600 | AT1G44980.1 | 43.617 | 188 | 101 | 3 | 183 | 365 | 54 | 241 | 1.44e-39 | 144 |
Msa0593600 | AT5G18990.1 | 33.798 | 287 | 164 | 7 | 200 | 471 | 24 | 299 | 7.60e-38 | 142 |
Msa0593600 | AT2G21610.1 | 30.100 | 299 | 187 | 7 | 205 | 498 | 51 | 332 | 8.43e-38 | 142 |
Msa0593600 | AT2G21610.2 | 30.100 | 299 | 187 | 7 | 205 | 498 | 56 | 337 | 9.65e-38 | 142 |
Msa0593600 | AT5G55590.1 | 33.333 | 309 | 179 | 9 | 205 | 498 | 82 | 378 | 7.22e-37 | 140 |
Msa0593600 | AT2G19150.1 | 31.889 | 323 | 190 | 10 | 197 | 505 | 33 | 339 | 4.89e-36 | 137 |
Msa0593600 | AT3G24130.1 | 32.155 | 283 | 170 | 6 | 202 | 471 | 31 | 304 | 1.50e-35 | 135 |
Msa0593600 | AT5G47500.1 | 28.267 | 329 | 198 | 8 | 185 | 498 | 52 | 357 | 3.06e-35 | 135 |
Msa0593600 | AT5G07430.1 | 28.610 | 374 | 232 | 12 | 140 | 498 | 2 | 355 | 6.23e-35 | 134 |
Msa0593600 | AT5G26810.1 | 30.793 | 328 | 197 | 10 | 191 | 500 | 20 | 335 | 1.15e-34 | 133 |
Msa0593600 | AT5G55590.2 | 35.573 | 253 | 139 | 8 | 205 | 442 | 82 | 325 | 4.37e-34 | 131 |
Msa0593600 | AT3G49220.2 | 30.961 | 281 | 166 | 7 | 28 | 281 | 131 | 410 | 2.23e-33 | 131 |
Msa0593600 | AT2G47280.1 | 30.421 | 309 | 184 | 8 | 205 | 498 | 35 | 327 | 2.18e-30 | 121 |
Msa0593600 | AT2G19150.2 | 32.558 | 258 | 151 | 8 | 197 | 442 | 33 | 279 | 4.72e-29 | 116 |
Msa0593600 | AT5G07420.1 | 27.859 | 341 | 214 | 10 | 176 | 498 | 29 | 355 | 7.97e-29 | 117 |
Msa0593600 | AT5G07410.1 | 26.087 | 345 | 228 | 10 | 167 | 498 | 25 | 355 | 4.35e-26 | 109 |
Msa0593600 | AT5G61680.1 | 27.885 | 312 | 200 | 9 | 198 | 498 | 61 | 358 | 4.47e-26 | 109 |
Msa0593600 | AT1G69940.1 | 25.946 | 370 | 244 | 12 | 144 | 498 | 1 | 355 | 2.83e-25 | 107 |
Find 129 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAACAACTTTGTTACATTAT+TGG | 0.127213 | 4_2:-19923671 | None:intergenic |
TTGGCTGTTCTATTGTATTT+AGG | 0.188538 | 4_2:+19927095 | Msa0593600:three_prime_UTR |
TGTATTACTAGTTAGTTTAT+TGG | 0.189679 | 4_2:+19927076 | Msa0593600:three_prime_UTR |
GGTTTGATTGAAAGCATTAT+TGG | 0.202138 | 4_2:-19923347 | None:intergenic |
GGGACAGTTGATTTCATCTT+TGG | 0.221019 | 4_2:+19926411 | Msa0593600:CDS |
GAATTATAATTCATAATTCT+AGG | 0.221921 | 4_2:+19926541 | Msa0593600:CDS |
TATAGAGAATGTAACATCTA+TGG | 0.255655 | 4_2:+19926390 | Msa0593600:CDS |
TATGAACAACTTAGTATATA+TGG | 0.278008 | 4_2:-19926974 | None:intergenic |
GAGAAGGGTTTATGAGGTTT+TGG | 0.290145 | 4_2:-19923143 | None:intergenic |
CTGGACTTTAAGCGTTTCTT+TGG | 0.291075 | 4_2:+19926892 | Msa0593600:exon |
TTCATGAAAACTGTTATTGA+TGG | 0.343065 | 4_2:+19926645 | Msa0593600:CDS |
AAGCTGTACTAAGCCATGTT+TGG | 0.344214 | 4_2:-19923576 | None:intergenic |
TTCAATGGCTTCATTTCCTT+TGG | 0.346370 | 4_2:+19923204 | Msa0593600:exon |
TACTCACATGGTTGAGGATA+AGG | 0.351224 | 4_2:-19923316 | None:intergenic |
CAAGCTGTTGCATTTCGTTC+CGG | 0.356258 | 4_2:+19926288 | Msa0593600:CDS |
CAGGTTCATCCACTTCAAAC+AGG | 0.356739 | 4_2:+19926754 | Msa0593600:CDS |
ACCGTTGGGAATTTCATTGC+CGG | 0.366873 | 4_2:+19926831 | Msa0593600:CDS |
GAATATGCTAATACAGGTTC+AGG | 0.371500 | 4_2:+19926735 | Msa0593600:CDS |
AGCTGTACTAAGCCATGTTT+GGG | 0.379379 | 4_2:-19923575 | None:intergenic |
ATTTCATTGCCGGTAATTCA+TGG | 0.379520 | 4_2:+19926841 | Msa0593600:CDS |
CATCTTTGTAACTTGGTTGT+TGG | 0.388751 | 4_2:-19923726 | None:intergenic |
GTTTCCTATCCATGAATTAC+CGG | 0.395370 | 4_2:-19926850 | None:intergenic |
AACTTAGAGAAGGGTTTATG+AGG | 0.395587 | 4_2:-19923149 | None:intergenic |
ACTCACATGGTTGAGGATAA+GGG | 0.396273 | 4_2:-19923315 | None:intergenic |
ATGGTTGAGGATAAGGGGTT+TGG | 0.402492 | 4_2:-19923309 | None:intergenic |
ACAATAGTGGAGAAAAGAAA+TGG | 0.403364 | 4_2:-19923247 | None:intergenic |
TCTTGTGGGCTACGGCACTT+AGG | 0.413550 | 4_2:-19923460 | None:intergenic |
CGTCGTTGCTAAGGATGGTT+CGG | 0.414368 | 4_2:+19923822 | Msa0593600:CDS |
TTGTAACTTGGTTGTTGGTA+AGG | 0.414505 | 4_2:-19923721 | None:intergenic |
TTCTAGGGTTTCCGCTCAAT+CGG | 0.419321 | 4_2:+19926557 | Msa0593600:CDS |
TTATATAAAAGAATTGTTGT+TGG | 0.422532 | 4_2:+19927174 | Msa0593600:three_prime_UTR |
TTTGCAGCTGCTACTGGTGA+TGG | 0.425142 | 4_2:+19926213 | Msa0593600:intron |
CCACTTCAAACAGGGTTACA+TGG | 0.430901 | 4_2:+19926763 | Msa0593600:CDS |
GTCGTTGCTAAGGATGGTTC+GGG | 0.434190 | 4_2:+19923823 | Msa0593600:CDS |
CATGGGTTAAACCTGGTGAT+AGG | 0.443867 | 4_2:+19923758 | Msa0593600:CDS |
AAGCTTCACCTTTCACCGTT+GGG | 0.443952 | 4_2:+19926817 | Msa0593600:CDS |
AGTTTCACTTGAACTTGCTA+TGG | 0.444556 | 4_2:+19923396 | Msa0593600:CDS |
AACTTCTTCCGCGGCTTCGA+AGG | 0.447444 | 4_2:+19923792 | Msa0593600:CDS |
CAAGCTTCACCTTTCACCGT+TGG | 0.453573 | 4_2:+19926816 | Msa0593600:CDS |
TCGTTCCGGCTCCGATCTAT+CGG | 0.457003 | 4_2:+19926302 | Msa0593600:CDS |
GGCTAATGTCGTCGTTGCTA+AGG | 0.459522 | 4_2:+19923813 | Msa0593600:CDS |
CTTGTGGGCTACGGCACTTA+GGG | 0.460985 | 4_2:-19923459 | None:intergenic |
TATGCTGAATATGCTAATAC+AGG | 0.469023 | 4_2:+19926729 | Msa0593600:CDS |
ACAGGTGTGCCATTCACCTC+TGG | 0.472976 | 4_2:+19926873 | Msa0593600:CDS |
ATGAAATTCCCAACGGTGAA+AGG | 0.479388 | 4_2:-19926825 | None:intergenic |
CAACAACCAAGTTACAAAGA+TGG | 0.480845 | 4_2:+19923727 | Msa0593600:CDS |
CCCTGCTGGTTGGTTACCAT+GGG | 0.482029 | 4_2:+19926677 | Msa0593600:CDS |
AATTATAATTCATAATTCTA+GGG | 0.485667 | 4_2:+19926542 | Msa0593600:CDS |
CTGTTAAATCGTACCTTGGT+AGG | 0.486089 | 4_2:+19926595 | Msa0593600:CDS |
ATAGAGAATGTAACATCTAT+GGG | 0.487737 | 4_2:+19926391 | Msa0593600:CDS |
TGAGTAACCATAAACAATAG+TGG | 0.489662 | 4_2:-19923260 | None:intergenic |
GGAAATCCATCTTTGTAACT+TGG | 0.499245 | 4_2:-19923733 | None:intergenic |
ATTGCCGGTAATTCATGGAT+AGG | 0.500552 | 4_2:+19926846 | Msa0593600:CDS |
AAGTTGTTCATAAGATCAAT+TGG | 0.501779 | 4_2:+19926985 | Msa0593600:three_prime_UTR |
TCCCATGGTAACCAACCAGC+AGG | 0.502238 | 4_2:-19926678 | None:intergenic |
TCCTTGTGCGGTAACTGTGA+TGG | 0.506939 | 4_2:-19926493 | None:intergenic |
ACCCTGCTGGTTGGTTACCA+TGG | 0.509749 | 4_2:+19926676 | Msa0593600:CDS |
TAACTAGTAATACATTTGAA+TGG | 0.513519 | 4_2:-19927067 | None:intergenic |
GGTACGATTTAACAGAGCTA+GGG | 0.515662 | 4_2:-19926587 | None:intergenic |
GATGCTGCACCAAGTGGTAG+TGG | 0.515780 | 4_2:+19923874 | Msa0593600:CDS |
CATTAAGTTCCATAAAATCA+TGG | 0.516559 | 4_2:+19923281 | Msa0593600:CDS |
ATGTTGGTGGGTGATGGTAT+TGG | 0.525394 | 4_2:+19923964 | Msa0593600:CDS |
AGGTACGATTTAACAGAGCT+AGG | 0.534156 | 4_2:-19926588 | None:intergenic |
AAATAATACTCACATGGTTG+AGG | 0.534999 | 4_2:-19923322 | None:intergenic |
ATTGGTAAAACTATAATCAC+TGG | 0.535759 | 4_2:+19923982 | Msa0593600:CDS |
ATATAAAGACACTAAAATCA+AGG | 0.536961 | 4_2:+19923096 | None:intergenic |
TCACCAGGTTTAACCCATGT+TGG | 0.540325 | 4_2:-19923754 | None:intergenic |
TGAAGAAGTTTCCTATCACC+AGG | 0.540939 | 4_2:-19923769 | None:intergenic |
ATGATGAGAAACTTAGAGAA+GGG | 0.541566 | 4_2:-19923158 | None:intergenic |
ATCACTGGTAGCAAAAGTGT+TGG | 0.542034 | 4_2:+19923997 | Msa0593600:CDS |
CTCACATGGTTGAGGATAAG+GGG | 0.542503 | 4_2:-19923314 | None:intergenic |
CCATGTAACCCTGTTTGAAG+TGG | 0.545231 | 4_2:-19926763 | None:intergenic |
TCAAACAGGGTTACATGGAA+AGG | 0.546301 | 4_2:+19926768 | Msa0593600:CDS |
ACAAAGATGGATTTCCAACA+TGG | 0.557740 | 4_2:+19923740 | Msa0593600:CDS |
ACCATCACAGTTACCGCACA+AGG | 0.559866 | 4_2:+19926492 | Msa0593600:CDS |
AATGTCGTCGTTGCTAAGGA+TGG | 0.559942 | 4_2:+19923817 | Msa0593600:CDS |
AATGTCATGTTGGTGGGTGA+TGG | 0.561648 | 4_2:+19923958 | Msa0593600:CDS |
ACTGGTAGCAAAAGTGTTGG+AGG | 0.563435 | 4_2:+19924000 | Msa0593600:CDS |
ATCACATTTAGAAACACAGC+TGG | 0.566335 | 4_2:+19926252 | Msa0593600:CDS |
TAAAGCAAAGAATGTCATGT+TGG | 0.567010 | 4_2:+19923948 | Msa0593600:CDS |
TTTGTAAAAGACCGATAGAT+CGG | 0.567687 | 4_2:-19926313 | None:intergenic |
ATTAAAAGAGTTGTTACCAA+AGG | 0.567706 | 4_2:-19923220 | None:intergenic |
ACCGATCCAAATCAAAACAC+TGG | 0.569193 | 4_2:+19926519 | Msa0593600:CDS |
AATCGTACCTTGGTAGGCCG+TGG | 0.576253 | 4_2:+19926601 | Msa0593600:CDS |
AAAGACCGATAGATCGGAGC+CGG | 0.577312 | 4_2:-19926307 | None:intergenic |
CACAATATGAATCCCAAACA+TGG | 0.578929 | 4_2:+19923563 | Msa0593600:CDS |
GCTTAAAGTCCAGAGGTGAA+TGG | 0.579277 | 4_2:-19926882 | None:intergenic |
TAACACCTTGTCACTTAACA+AGG | 0.581892 | 4_2:+19923696 | Msa0593600:CDS |
TGTTACATTATTGGACAACA+AGG | 0.584290 | 4_2:-19923662 | None:intergenic |
TTTCCAACATGGGTTAAACC+TGG | 0.589586 | 4_2:+19923751 | Msa0593600:CDS |
TGGATCGGTTCTTCCTTGTG+CGG | 0.593989 | 4_2:-19926505 | None:intergenic |
ACTTTCCGTTCAGCAACCGT+TGG | 0.594941 | 4_2:+19924033 | Msa0593600:CDS |
CGGAACGAAATGCAACAGCT+TGG | 0.595802 | 4_2:-19926287 | None:intergenic |
AGCAAAGAATGTCATGTTGG+TGG | 0.597389 | 4_2:+19923951 | Msa0593600:CDS |
TATGATGAGAAACTTAGAGA+AGG | 0.598833 | 4_2:-19923159 | None:intergenic |
TATGTGATATATGTGAAGGC+TGG | 0.599695 | 4_2:+19923901 | Msa0593600:CDS |
GGGCAAGTACACGACGGTGA+AGG | 0.602626 | 4_2:+19923843 | Msa0593600:CDS |
GCTGGTTGGTTACCATGGGA+TGG | 0.604546 | 4_2:+19926681 | Msa0593600:CDS |
CTGCACCAAGTGGTAGTGGA+AGG | 0.608150 | 4_2:+19923878 | Msa0593600:CDS |
AAAGCAAAATTACCATCCCA+TGG | 0.612268 | 4_2:-19926693 | None:intergenic |
CACGACGGTGAAGGCCGCGA+CGG | 0.612289 | 4_2:+19923852 | Msa0593600:CDS |
GTTACATTATTGGACAACAA+GGG | 0.617044 | 4_2:-19923661 | None:intergenic |
AGGTTCATCCACTTCAAACA+GGG | 0.619005 | 4_2:+19926755 | Msa0593600:CDS |
GACATTAGCCTTCGAAGCCG+CGG | 0.622925 | 4_2:-19923800 | None:intergenic |
AGCTCTGTTAAATCGTACCT+TGG | 0.625217 | 4_2:+19926591 | Msa0593600:CDS |
ACTTACCAACGGTTGCTGAA+CGG | 0.626940 | 4_2:-19924038 | None:intergenic |
CAAAGATGGATTTCCAACAT+GGG | 0.627787 | 4_2:+19923741 | Msa0593600:CDS |
GCAAAGAATGTCATGTTGGT+GGG | 0.630792 | 4_2:+19923952 | Msa0593600:CDS |
ACTTCTTCAAACTTCTTCCG+CGG | 0.630906 | 4_2:+19923783 | Msa0593600:CDS |
AGGGTTTAAATCCGATTGAG+CGG | 0.635907 | 4_2:-19926568 | None:intergenic |
ACATACCTTCCACTACCACT+TGG | 0.638708 | 4_2:-19923883 | None:intergenic |
GGTAGCAAAAGTGTTGGAGG+TGG | 0.640198 | 4_2:+19924003 | Msa0593600:CDS |
GAGAAGCACTAGTAAGAACA+TGG | 0.644219 | 4_2:-19926794 | None:intergenic |
GAAGAAAATACACATGCACT+TGG | 0.644990 | 4_2:+19923436 | Msa0593600:CDS |
TTGGTTAAATAATACTCACA+TGG | 0.648130 | 4_2:-19923328 | None:intergenic |
AAGGTATGTGATATATGTGA+AGG | 0.653633 | 4_2:+19923897 | Msa0593600:CDS |
AGGAACCTTGTTAAGTGACA+AGG | 0.653769 | 4_2:-19923701 | None:intergenic |
GCGACGGATGCTGCACCAAG+TGG | 0.664715 | 4_2:+19923868 | Msa0593600:CDS |
GGTTGCTGAACGGAAAGTAG+TGG | 0.670011 | 4_2:-19924028 | None:intergenic |
CCCATGGTAACCAACCAGCA+GGG | 0.670836 | 4_2:-19926677 | None:intergenic |
ACCGGCAATGAAATTCCCAA+CGG | 0.671958 | 4_2:-19926832 | None:intergenic |
AAGAAACGCTTAAAGTCCAG+AGG | 0.675031 | 4_2:-19926889 | None:intergenic |
TTAATTGAGAACTAATCACA+AGG | 0.685708 | 4_2:-19927012 | None:intergenic |
ACTTGGTGCAGCATCCGTCG+CGG | 0.690402 | 4_2:-19923866 | None:intergenic |
AATTCATGGATAGGAAACAC+AGG | 0.692716 | 4_2:+19926855 | Msa0593600:CDS |
AGACATAGTTTGTGACACCA+AGG | 0.696122 | 4_2:-19923636 | None:intergenic |
TGAATTTATCAGAATCACAG+TGG | 0.750580 | 4_2:+19926922 | Msa0593600:three_prime_UTR |
TGGTTCGGGCAAGTACACGA+CGG | 0.758627 | 4_2:+19923837 | Msa0593600:CDS |
TTTCATCTTTGGAAACGCCG+CGG | 0.774990 | 4_2:+19926422 | Msa0593600:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAATAAATATTTAAATTAA+TGG | - | chr4_2:19924366-19924385 | None:intergenic | 0.0% |
!!! | TATAATTTTTTATATTTTTT+AGG | + | chr4_2:19925033-19925052 | Msa0593600:intron | 0.0% |
!!! | ATAATTTTTTATATTTTTTA+GGG | + | chr4_2:19925034-19925053 | Msa0593600:intron | 0.0% |
!! | AAATATAACAAATAACTTAA+AGG | - | chr4_2:19924516-19924535 | None:intergenic | 10.0% |
!! | AAATAAATAATTATATCAGT+AGG | + | chr4_2:19924634-19924653 | Msa0593600:intron | 10.0% |
!! | AATAAATAATTATATCAGTA+GGG | + | chr4_2:19924635-19924654 | Msa0593600:intron | 10.0% |
!!! | TAAAGATTGAAAATTTTATA+GGG | - | chr4_2:19924880-19924899 | None:intergenic | 10.0% |
!!! | TATAATATTTTGAATTTTTC+TGG | - | chr4_2:19924964-19924983 | None:intergenic | 10.0% |
!!! | AAAAAATTCTAATTTTTTTC+AGG | + | chr4_2:19925088-19925107 | Msa0593600:intron | 10.0% |
!!! | TAGTTATTGAAAATTTTATA+GGG | + | chr4_2:19925193-19925212 | Msa0593600:intron | 10.0% |
!! | TTTCTTAATCATTAAATTAA+GGG | - | chr4_2:19925488-19925507 | None:intergenic | 10.0% |
!! | ATTTCTTAATCATTAAATTA+AGG | - | chr4_2:19925489-19925508 | None:intergenic | 10.0% |
!! | AATTATAATTCATAATTCTA+GGG | + | chr4_2:19926542-19926561 | Msa0593600:CDS | 10.0% |
!!! | TAACAATACAATTAATTTTT+TGG | - | chr4_2:19927143-19927162 | None:intergenic | 10.0% |
!!! | ATTGAAAAATGATGATTTTA+GGG | - | chr4_2:19923190-19923209 | None:intergenic | 15.0% |
!!! | AAAATCGGATTTATTTTTTA+TGG | - | chr4_2:19923371-19923390 | None:intergenic | 15.0% |
!!! | ATATTTACAAAAAAAAGTGT+CGG | + | chr4_2:19924474-19924493 | Msa0593600:intron | 15.0% |
!! | ATAAATAATTATATCAGTAG+GGG | + | chr4_2:19924636-19924655 | Msa0593600:intron | 15.0% |
!!! | GTAAAGATTGAAAATTTTAT+AGG | - | chr4_2:19924881-19924900 | None:intergenic | 15.0% |
!!! | AAATTTTCAATCTTTACTTT+TGG | + | chr4_2:19924884-19924903 | Msa0593600:intron | 15.0% |
!!! | GTAGTTATTGAAAATTTTAT+AGG | + | chr4_2:19925192-19925211 | Msa0593600:intron | 15.0% |
!! | GAATAATTATTTATATCCTT+TGG | - | chr4_2:19925354-19925373 | None:intergenic | 15.0% |
!!! | ATTACTTTAAAATCTCTTTA+CGG | + | chr4_2:19925398-19925417 | Msa0593600:intron | 15.0% |
!! | TTAAGATAATATATCATAGA+AGG | - | chr4_2:19925425-19925444 | None:intergenic | 15.0% |
!! | TTCAATTAAATCAATTATTG+TGG | - | chr4_2:19925520-19925539 | None:intergenic | 15.0% |
!!! | ATTCAATTCATTATGTTTTT+GGG | - | chr4_2:19925556-19925575 | None:intergenic | 15.0% |
!!! | TATTCAATTCATTATGTTTT+TGG | - | chr4_2:19925557-19925576 | None:intergenic | 15.0% |
!! | TTAAGGAAAAATATTAATCT+AGG | - | chr4_2:19925810-19925829 | None:intergenic | 15.0% |
!! | ACTTTAACTAATTTCTTAAT+TGG | + | chr4_2:19925862-19925881 | Msa0593600:intron | 15.0% |
!! | TTTAATTAAAAGAAGAATGT+GGG | + | chr4_2:19925961-19925980 | Msa0593600:intron | 15.0% |
!! | GAATTATAATTCATAATTCT+AGG | + | chr4_2:19926541-19926560 | Msa0593600:CDS | 15.0% |
!! | GAAAGAAAAATAATTTAGTA+CGG | + | chr4_2:19927117-19927136 | Msa0593600:three_prime_UTR | 15.0% |
!! | TTATATAAAAGAATTGTTGT+TGG | + | chr4_2:19927174-19927193 | Msa0593600:three_prime_UTR | 15.0% |
!!! | CATTGAAAAATGATGATTTT+AGG | - | chr4_2:19923191-19923210 | None:intergenic | 20.0% |
!!! | CTAAAATCATCATTTTTCAA+TGG | + | chr4_2:19923189-19923208 | Msa0593600:exon | 20.0% |
!!! | AAGTGAAACTTTGAAAAAAT+CGG | - | chr4_2:19923386-19923405 | None:intergenic | 20.0% |
!! | TAACAACTTTGTTACATTAT+TGG | - | chr4_2:19923674-19923693 | None:intergenic | 20.0% |
!!! | ATTTGTGAACTTTTCTTTAA+GGG | - | chr4_2:19924105-19924124 | None:intergenic | 20.0% |
!!! | TATTTGTGAACTTTTCTTTA+AGG | - | chr4_2:19924106-19924125 | None:intergenic | 20.0% |
!! | CTAGTTTATGATTTAGTTAT+TGG | - | chr4_2:19924212-19924231 | None:intergenic | 20.0% |
!!! | TGCATAAGATTTTTCAATAA+AGG | - | chr4_2:19924242-19924261 | None:intergenic | 20.0% |
!! | GAAAATTACTTATGAATGAT+AGG | + | chr4_2:19924401-19924420 | Msa0593600:intron | 20.0% |
!!! | TACTTATTTTATTTCCATCT+AGG | + | chr4_2:19924435-19924454 | Msa0593600:intron | 20.0% |
!!! | ACTTATTTTATTTCCATCTA+GGG | + | chr4_2:19924436-19924455 | Msa0593600:intron | 20.0% |
!! | AAAATTAATTTAACCCTAGA+TGG | - | chr4_2:19924452-19924471 | None:intergenic | 20.0% |
!! | GAAAAGTTGACATATTTATA+GGG | - | chr4_2:19925253-19925272 | None:intergenic | 20.0% |
!!! | AGTTGAAGGAAAATTTTAAA+GGG | - | chr4_2:19924851-19924870 | None:intergenic | 20.0% |
!!! | AAGTTGAAGGAAAATTTTAA+AGG | - | chr4_2:19924852-19924871 | None:intergenic | 20.0% |
!!! | TATGAGTTTACTTTAAAAGA+GGG | - | chr4_2:19924911-19924930 | None:intergenic | 20.0% |
!!! | ATATGAGTTTACTTTAAAAG+AGG | - | chr4_2:19924912-19924931 | None:intergenic | 20.0% |
!! | GAAAAGTTGACATATTTATA+GGG | + | chr4_2:19925253-19925272 | Msa0593600:intron | 20.0% |
!!! | AATTGGGTTAAATATGTTTT+TGG | - | chr4_2:19925280-19925299 | None:intergenic | 20.0% |
!!! | AGATTTTAAAGTAATCACAA+TGG | - | chr4_2:19925393-19925412 | None:intergenic | 20.0% |
!!! | ATCATAGTCTAAAACTTTAT+TGG | - | chr4_2:19925601-19925620 | None:intergenic | 20.0% |
!! | TATGATTTGAATCATTTACA+TGG | + | chr4_2:19925615-19925634 | Msa0593600:intron | 20.0% |
!! | GAATAAGACTATATTAAAGT+GGG | - | chr4_2:19925929-19925948 | None:intergenic | 20.0% |
!! | TGAATAAGACTATATTAAAG+TGG | - | chr4_2:19925930-19925949 | None:intergenic | 20.0% |
!!! | CACATTCTTCTTTTAATTAA+AGG | - | chr4_2:19925962-19925981 | None:intergenic | 20.0% |
!! | CTTTAATTAAAAGAAGAATG+TGG | + | chr4_2:19925960-19925979 | Msa0593600:intron | 20.0% |
!! | TTAATTAAAAGAAGAATGTG+GGG | + | chr4_2:19925962-19925981 | Msa0593600:intron | 20.0% |
!! | TTCAACTGATTATTAACTTA+TGG | - | chr4_2:19926005-19926024 | None:intergenic | 20.0% |
!! | TATGAACAACTTAGTATATA+TGG | - | chr4_2:19926977-19926996 | None:intergenic | 20.0% |
!! | TAACTAGTAATACATTTGAA+TGG | - | chr4_2:19927070-19927089 | None:intergenic | 20.0% |
!!! | TGTATTACTAGTTAGTTTAT+TGG | + | chr4_2:19927076-19927095 | Msa0593600:three_prime_UTR | 20.0% |
!!! | AAAATGATGATTTTAGGGTA+TGG | - | chr4_2:19923185-19923204 | None:intergenic | 25.0% |
! | ATTAAAAGAGTTGTTACCAA+AGG | - | chr4_2:19923223-19923242 | None:intergenic | 25.0% |
! | CATTAAGTTCCATAAAATCA+TGG | + | chr4_2:19923281-19923300 | Msa0593600:CDS | 25.0% |
! | TTGGTTAAATAATACTCACA+TGG | - | chr4_2:19923331-19923350 | None:intergenic | 25.0% |
!!! | AAAAATGGATTTTATGACCT+TGG | + | chr4_2:19923619-19923638 | Msa0593600:CDS | 25.0% |
! | ATTGGTAAAACTATAATCAC+TGG | + | chr4_2:19923982-19924001 | Msa0593600:CDS | 25.0% |
!! | CAGGTAAGAACTTTTTAATA+AGG | - | chr4_2:19924151-19924170 | None:intergenic | 25.0% |
!! | TGAATGAACTTTTCTTTTCT+TGG | - | chr4_2:19924180-19924199 | None:intergenic | 25.0% |
! | ACTTATGAATGATAGGTAAA+CGG | + | chr4_2:19924408-19924427 | Msa0593600:intron | 25.0% |
!! | TCAAGGGTTAAATATGTTTT+TGG | + | chr4_2:19924793-19924812 | Msa0593600:intron | 25.0% |
! | CGAAAAGTTGACATATTTAT+AGG | - | chr4_2:19925252-19925271 | None:intergenic | 25.0% |
!! | AAGTTGAAGGAAAATTTTAG+AGG | + | chr4_2:19925221-19925240 | Msa0593600:intron | 25.0% |
!! | AGTTGAAGGAAAATTTTAGA+GGG | + | chr4_2:19925222-19925241 | Msa0593600:intron | 25.0% |
! | CGAAAAGTTGACATATTTAT+AGG | + | chr4_2:19925252-19925271 | Msa0593600:intron | 25.0% |
!! | TCTGTGAGTAATTGATAATT+GGG | - | chr4_2:19925296-19925315 | None:intergenic | 25.0% |
! | ATTATCTACTTTCTTACTCA+AGG | - | chr4_2:19925328-19925347 | None:intergenic | 25.0% |
!!! | CTGCTTGCTTTTATATAATT+AGG | - | chr4_2:19925449-19925468 | None:intergenic | 25.0% |
! | ACATAATGAATTGAATATCG+TGG | + | chr4_2:19925560-19925579 | Msa0593600:intron | 25.0% |
! | TATGTAGCTTTCAAAAATGA+AGG | + | chr4_2:19925654-19925673 | Msa0593600:intron | 25.0% |
! | TTTAGTAGTCAAATCTTTAG+AGG | + | chr4_2:19925729-19925748 | Msa0593600:intron | 25.0% |
!!! | TTTTACAAATGTAGCTTTGA+AGG | + | chr4_2:19926327-19926346 | Msa0593600:CDS | 25.0% |
! | TATAGAGAATGTAACATCTA+TGG | + | chr4_2:19926390-19926409 | Msa0593600:CDS | 25.0% |
! | ATAGAGAATGTAACATCTAT+GGG | + | chr4_2:19926391-19926410 | Msa0593600:CDS | 25.0% |
!!! | ATAATTCCAGTGTTTTGATT+TGG | - | chr4_2:19926528-19926547 | None:intergenic | 25.0% |
! | TTCATGAAAACTGTTATTGA+TGG | + | chr4_2:19926645-19926664 | Msa0593600:CDS | 25.0% |
! | AAGTTGTTCATAAGATCAAT+TGG | + | chr4_2:19926985-19927004 | Msa0593600:three_prime_UTR | 25.0% |
! | TTAATTGAGAACTAATCACA+AGG | - | chr4_2:19927015-19927034 | None:intergenic | 25.0% |
ATGATGAGAAACTTAGAGAA+GGG | - | chr4_2:19923161-19923180 | None:intergenic | 30.0% | |
TATGATGAGAAACTTAGAGA+AGG | - | chr4_2:19923162-19923181 | None:intergenic | 30.0% | |
! | ACAATAGTGGAGAAAAGAAA+TGG | - | chr4_2:19923250-19923269 | None:intergenic | 30.0% |
! | CTTTTCTCCACTATTGTTTA+TGG | + | chr4_2:19923253-19923272 | Msa0593600:CDS | 30.0% |
TGAGTAACCATAAACAATAG+TGG | - | chr4_2:19923263-19923282 | None:intergenic | 30.0% | |
! | TTGGTTACACCATGATTTTA+TGG | - | chr4_2:19923293-19923312 | None:intergenic | 30.0% |
AAATAATACTCACATGGTTG+AGG | - | chr4_2:19923325-19923344 | None:intergenic | 30.0% | |
!! | GGTTTGATTGAAAGCATTAT+TGG | - | chr4_2:19923350-19923369 | None:intergenic | 30.0% |
!! | ATTTTGTTTGGCTAAGCTTT+TGG | - | chr4_2:19923531-19923550 | None:intergenic | 30.0% |
! | TGCACTTTGTGTATTTTGTT+TGG | - | chr4_2:19923543-19923562 | None:intergenic | 30.0% |
AACCTTGAAACATGCAAAAA+TGG | + | chr4_2:19923604-19923623 | Msa0593600:CDS | 30.0% | |
!! | ATCCATTTTTGCATGTTTCA+AGG | - | chr4_2:19923609-19923628 | None:intergenic | 30.0% |
GTTACATTATTGGACAACAA+GGG | - | chr4_2:19923664-19923683 | None:intergenic | 30.0% | |
TGTTACATTATTGGACAACA+AGG | - | chr4_2:19923665-19923684 | None:intergenic | 30.0% | |
AAGGTATGTGATATATGTGA+AGG | + | chr4_2:19923897-19923916 | Msa0593600:CDS | 30.0% | |
TAAAGCAAAGAATGTCATGT+TGG | + | chr4_2:19923948-19923967 | Msa0593600:CDS | 30.0% | |
!! | TTACTAGAAGTACTTACCAA+CGG | - | chr4_2:19924052-19924071 | None:intergenic | 30.0% |
AAGGGATAAAAAAAGCTGTA+CGG | - | chr4_2:19924087-19924106 | None:intergenic | 30.0% | |
TGCTTAGAAAGTTAACTAGT+CGG | + | chr4_2:19924269-19924288 | Msa0593600:intron | 30.0% | |
CTTATGAATGATAGGTAAAC+GGG | + | chr4_2:19924409-19924428 | Msa0593600:intron | 30.0% | |
TTATGAATGATAGGTAAACG+GGG | + | chr4_2:19924410-19924429 | Msa0593600:intron | 30.0% | |
TGAGAAGCTATGTATAACAA+CGG | + | chr4_2:19924680-19924699 | Msa0593600:intron | 30.0% | |
TGTTAAGGTTGCATATCTTA+TGG | + | chr4_2:19924717-19924736 | Msa0593600:intron | 30.0% | |
!! | GTATTGACTTTAGATTTGTG+TGG | + | chr4_2:19924756-19924775 | Msa0593600:intron | 30.0% |
CTTTAGATTTGTGTGGTATA+TGG | + | chr4_2:19924763-19924782 | Msa0593600:intron | 30.0% | |
TGGTATATGGCAAATTATCA+AGG | + | chr4_2:19924776-19924795 | Msa0593600:intron | 30.0% | |
GGTATATGGCAAATTATCAA+GGG | + | chr4_2:19924777-19924796 | Msa0593600:intron | 30.0% | |
TTATAGGGACTAAAAGTTGA+AGG | - | chr4_2:19925208-19925227 | None:intergenic | 30.0% | |
TTATAGGGACTAAAAGTTGA+AGG | + | chr4_2:19925208-19925227 | Msa0593600:intron | 30.0% | |
! | GTCTGTGAGTAATTGATAAT+TGG | - | chr4_2:19925297-19925316 | None:intergenic | 30.0% |
GAAAGTAGATAATAGACCAA+AGG | + | chr4_2:19925335-19925354 | Msa0593600:intron | 30.0% | |
GGCTTTCTATATGTTATAGT+CGG | - | chr4_2:19925763-19925782 | None:intergenic | 30.0% | |
! | AATCTAGGATTGATTCTAGA+GGG | - | chr4_2:19925795-19925814 | None:intergenic | 30.0% |
! | TAATCTAGGATTGATTCTAG+AGG | - | chr4_2:19925796-19925815 | None:intergenic | 30.0% |
ACTATATATGCGGTTCATTA+AGG | - | chr4_2:19925827-19925846 | None:intergenic | 30.0% | |
CACATAGGAAACTATATATG+CGG | - | chr4_2:19925837-19925856 | None:intergenic | 30.0% | |
! | TAGTTAAAGTGTTACCACAT+AGG | - | chr4_2:19925852-19925871 | None:intergenic | 30.0% |
! | TTTGGATTGGAATCTACAAT+TGG | + | chr4_2:19926060-19926079 | Msa0593600:intron | 30.0% |
TTTGTAAAAGACCGATAGAT+CGG | - | chr4_2:19926316-19926335 | None:intergenic | 30.0% | |
!! | GTTCTTGAATATTTTTGCCA+CGG | - | chr4_2:19926621-19926640 | None:intergenic | 30.0% |
TATGCTGAATATGCTAATAC+AGG | + | chr4_2:19926729-19926748 | Msa0593600:CDS | 30.0% | |
TGAATTTATCAGAATCACAG+TGG | + | chr4_2:19926922-19926941 | Msa0593600:three_prime_UTR | 30.0% | |
TTGGCTGTTCTATTGTATTT+AGG | + | chr4_2:19927095-19927114 | Msa0593600:three_prime_UTR | 30.0% | |
!!! | TTTTGGTTTGATGATGAGTG+AGG | - | chr4_2:19923129-19923148 | None:intergenic | 35.0% |
AACTTAGAGAAGGGTTTATG+AGG | - | chr4_2:19923152-19923171 | None:intergenic | 35.0% | |
TTCAATGGCTTCATTTCCTT+TGG | + | chr4_2:19923204-19923223 | Msa0593600:exon | 35.0% | |
!! | AGTTTCACTTGAACTTGCTA+TGG | + | chr4_2:19923396-19923415 | Msa0593600:CDS | 35.0% |
GAAGAAAATACACATGCACT+TGG | + | chr4_2:19923436-19923455 | Msa0593600:CDS | 35.0% | |
CACAATATGAATCCCAAACA+TGG | + | chr4_2:19923563-19923582 | Msa0593600:CDS | 35.0% | |
! | TAACACCTTGTCACTTAACA+AGG | + | chr4_2:19923696-19923715 | Msa0593600:CDS | 35.0% |
TTGTAACTTGGTTGTTGGTA+AGG | - | chr4_2:19923724-19923743 | None:intergenic | 35.0% | |
CATCTTTGTAACTTGGTTGT+TGG | - | chr4_2:19923729-19923748 | None:intergenic | 35.0% | |
CAACAACCAAGTTACAAAGA+TGG | + | chr4_2:19923727-19923746 | Msa0593600:CDS | 35.0% | |
GGAAATCCATCTTTGTAACT+TGG | - | chr4_2:19923736-19923755 | None:intergenic | 35.0% | |
! | ACAAAGATGGATTTCCAACA+TGG | + | chr4_2:19923740-19923759 | Msa0593600:CDS | 35.0% |
! | CAAAGATGGATTTCCAACAT+GGG | + | chr4_2:19923741-19923760 | Msa0593600:CDS | 35.0% |
TATGTGATATATGTGAAGGC+TGG | + | chr4_2:19923901-19923920 | Msa0593600:CDS | 35.0% | |
! | TTTCTTTTCTTGGTCAAGAC+AGG | - | chr4_2:19924170-19924189 | None:intergenic | 35.0% |
TACATAGCTTCTCATTCTAG+AGG | - | chr4_2:19924674-19924693 | None:intergenic | 35.0% | |
AAGATATGCAACCTTAACAC+CGG | - | chr4_2:19924716-19924735 | None:intergenic | 35.0% | |
!!! | TGTTTTTGGGCTCAATTATG+TGG | - | chr4_2:19925543-19925562 | None:intergenic | 35.0% |
CACATGTATTGTCTTACGTT+TGG | + | chr4_2:19925679-19925698 | Msa0593600:intron | 35.0% | |
ATTGTCTTACGTTTGGCTAT+AGG | + | chr4_2:19925686-19925705 | Msa0593600:intron | 35.0% | |
! | ATCTAGGATTGATTCTAGAG+GGG | - | chr4_2:19925794-19925813 | None:intergenic | 35.0% |
CGCATATATAGTTTCCTATG+TGG | + | chr4_2:19925835-19925854 | Msa0593600:intron | 35.0% | |
TATTAAAGTGGGTCCTACAT+TGG | - | chr4_2:19925918-19925937 | None:intergenic | 35.0% | |
GAGTATTAAAAAACCTAGCG+TGG | - | chr4_2:19926183-19926202 | None:intergenic | 35.0% | |
!!! | TTTTTTTTTGCAGCTGCTAC+TGG | + | chr4_2:19926207-19926226 | Msa0593600:intron | 35.0% |
ATCACATTTAGAAACACAGC+TGG | + | chr4_2:19926252-19926271 | Msa0593600:CDS | 35.0% | |
! | ACAATTTTGCAAAACTACCG+CGG | - | chr4_2:19926442-19926461 | None:intergenic | 35.0% |
!!! | TCCAGTGTTTTGATTTGGAT+CGG | - | chr4_2:19926523-19926542 | None:intergenic | 35.0% |
AAAGCAAAATTACCATCCCA+TGG | - | chr4_2:19926696-19926715 | None:intergenic | 35.0% | |
! | ATGGGATGGTAATTTTGCTT+TGG | + | chr4_2:19926695-19926714 | Msa0593600:CDS | 35.0% |
GAATATGCTAATACAGGTTC+AGG | + | chr4_2:19926735-19926754 | Msa0593600:CDS | 35.0% | |
ATTTCATTGCCGGTAATTCA+TGG | + | chr4_2:19926841-19926860 | Msa0593600:CDS | 35.0% | |
GTTTCCTATCCATGAATTAC+CGG | - | chr4_2:19926853-19926872 | None:intergenic | 35.0% | |
AATTCATGGATAGGAAACAC+AGG | + | chr4_2:19926855-19926874 | Msa0593600:CDS | 35.0% | |
! | GAGAAGGGTTTATGAGGTTT+TGG | - | chr4_2:19923146-19923165 | None:intergenic | 40.0% |
ACTCACATGGTTGAGGATAA+GGG | - | chr4_2:19923318-19923337 | None:intergenic | 40.0% | |
TACTCACATGGTTGAGGATA+AGG | - | chr4_2:19923319-19923338 | None:intergenic | 40.0% | |
GCTATGGAGAGAGCAAAAAA+AGG | + | chr4_2:19923412-19923431 | Msa0593600:CDS | 40.0% | |
AGCTGTACTAAGCCATGTTT+GGG | - | chr4_2:19923578-19923597 | None:intergenic | 40.0% | |
AAGCTGTACTAAGCCATGTT+TGG | - | chr4_2:19923579-19923598 | None:intergenic | 40.0% | |
! | AGACATAGTTTGTGACACCA+AGG | - | chr4_2:19923639-19923658 | None:intergenic | 40.0% |
AGGAACCTTGTTAAGTGACA+AGG | - | chr4_2:19923704-19923723 | None:intergenic | 40.0% | |
! | TTTCCAACATGGGTTAAACC+TGG | + | chr4_2:19923751-19923770 | Msa0593600:CDS | 40.0% |
TGAAGAAGTTTCCTATCACC+AGG | - | chr4_2:19923772-19923791 | None:intergenic | 40.0% | |
ACTTCTTCAAACTTCTTCCG+CGG | + | chr4_2:19923783-19923802 | Msa0593600:CDS | 40.0% | |
AGCAAAGAATGTCATGTTGG+TGG | + | chr4_2:19923951-19923970 | Msa0593600:CDS | 40.0% | |
GCAAAGAATGTCATGTTGGT+GGG | + | chr4_2:19923952-19923971 | Msa0593600:CDS | 40.0% | |
! | ATCACTGGTAGCAAAAGTGT+TGG | + | chr4_2:19923997-19924016 | Msa0593600:CDS | 40.0% |
TGTATAACAACGGTCCTTCT+CGG | + | chr4_2:19924690-19924709 | Msa0593600:intron | 40.0% | |
TTACGTTTGGCTATAGGACA+AGG | + | chr4_2:19925692-19925711 | Msa0593600:intron | 40.0% | |
CACAATTCCACATCCAATGT+AGG | + | chr4_2:19925902-19925921 | Msa0593600:intron | 40.0% | |
! | AGTACACACGTCATGCATTT+TGG | + | chr4_2:19926042-19926061 | Msa0593600:intron | 40.0% |
! | ACACGTCATGCATTTTGGAT+TGG | + | chr4_2:19926047-19926066 | Msa0593600:intron | 40.0% |
! | GGGACAGTTGATTTCATCTT+TGG | + | chr4_2:19926411-19926430 | Msa0593600:CDS | 40.0% |
! | GTAACTGTGATGGTTTTTGC+AGG | - | chr4_2:19926486-19926505 | None:intergenic | 40.0% |
ACCGATCCAAATCAAAACAC+TGG | + | chr4_2:19926519-19926538 | Msa0593600:CDS | 40.0% | |
AGGGTTTAAATCCGATTGAG+CGG | - | chr4_2:19926571-19926590 | None:intergenic | 40.0% | |
GGTACGATTTAACAGAGCTA+GGG | - | chr4_2:19926590-19926609 | None:intergenic | 40.0% | |
AGGTACGATTTAACAGAGCT+AGG | - | chr4_2:19926591-19926610 | None:intergenic | 40.0% | |
AGCTCTGTTAAATCGTACCT+TGG | + | chr4_2:19926591-19926610 | Msa0593600:CDS | 40.0% | |
CTGTTAAATCGTACCTTGGT+AGG | + | chr4_2:19926595-19926614 | Msa0593600:CDS | 40.0% | |
!!! | GATGGTTTTATTAACCCTGC+TGG | + | chr4_2:19926663-19926682 | Msa0593600:CDS | 40.0% |
!! | GTTTTATTAACCCTGCTGGT+TGG | + | chr4_2:19926667-19926686 | Msa0593600:CDS | 40.0% |
AGGTTCATCCACTTCAAACA+GGG | + | chr4_2:19926755-19926774 | Msa0593600:CDS | 40.0% | |
TCAAACAGGGTTACATGGAA+AGG | + | chr4_2:19926768-19926787 | Msa0593600:CDS | 40.0% | |
!! | GAGAAGCACTAGTAAGAACA+TGG | - | chr4_2:19926797-19926816 | None:intergenic | 40.0% |
ATGAAATTCCCAACGGTGAA+AGG | - | chr4_2:19926828-19926847 | None:intergenic | 40.0% | |
ATTGCCGGTAATTCATGGAT+AGG | + | chr4_2:19926846-19926865 | Msa0593600:CDS | 40.0% | |
AAGAAACGCTTAAAGTCCAG+AGG | - | chr4_2:19926892-19926911 | None:intergenic | 40.0% | |
CTGGACTTTAAGCGTTTCTT+TGG | + | chr4_2:19926892-19926911 | Msa0593600:exon | 40.0% | |
ATGGTTGAGGATAAGGGGTT+TGG | - | chr4_2:19923312-19923331 | None:intergenic | 45.0% | |
CTCACATGGTTGAGGATAAG+GGG | - | chr4_2:19923317-19923336 | None:intergenic | 45.0% | |
!! | CAGCTTTTTCTTGTGGGCTA+CGG | - | chr4_2:19923471-19923490 | None:intergenic | 45.0% |
!! | CCCAAGCAGCTTTTTCTTGT+GGG | - | chr4_2:19923477-19923496 | None:intergenic | 45.0% |
CCCACAAGAAAAAGCTGCTT+GGG | + | chr4_2:19923474-19923493 | Msa0593600:CDS | 45.0% | |
TCACCAGGTTTAACCCATGT+TGG | - | chr4_2:19923757-19923776 | None:intergenic | 45.0% | |
! | CATGGGTTAAACCTGGTGAT+AGG | + | chr4_2:19923758-19923777 | Msa0593600:CDS | 45.0% |
AATGTCGTCGTTGCTAAGGA+TGG | + | chr4_2:19923817-19923836 | Msa0593600:CDS | 45.0% | |
ACATACCTTCCACTACCACT+TGG | - | chr4_2:19923886-19923905 | None:intergenic | 45.0% | |
! | AATGTCATGTTGGTGGGTGA+TGG | + | chr4_2:19923958-19923977 | Msa0593600:CDS | 45.0% |
! | ATGTTGGTGGGTGATGGTAT+TGG | + | chr4_2:19923964-19923983 | Msa0593600:CDS | 45.0% |
!! | ACTGGTAGCAAAAGTGTTGG+AGG | + | chr4_2:19924000-19924019 | Msa0593600:CDS | 45.0% |
ACTTACCAACGGTTGCTGAA+CGG | - | chr4_2:19924041-19924060 | None:intergenic | 45.0% | |
! | GATTCTAGAGGGGAAAGATG+TGG | - | chr4_2:19925784-19925803 | None:intergenic | 45.0% |
CAAGCTGTTGCATTTCGTTC+CGG | + | chr4_2:19926288-19926307 | Msa0593600:CDS | 45.0% | |
! | TTTCATCTTTGGAAACGCCG+CGG | + | chr4_2:19926422-19926441 | Msa0593600:CDS | 45.0% |
! | ACTGTGATGGTTTTTGCAGG+CGG | - | chr4_2:19926483-19926502 | None:intergenic | 45.0% |
!! | TTCTAGGGTTTCCGCTCAAT+CGG | + | chr4_2:19926557-19926576 | Msa0593600:CDS | 45.0% |
CAGGTTCATCCACTTCAAAC+AGG | + | chr4_2:19926754-19926773 | Msa0593600:CDS | 45.0% | |
CCATGTAACCCTGTTTGAAG+TGG | - | chr4_2:19926766-19926785 | None:intergenic | 45.0% | |
CCACTTCAAACAGGGTTACA+TGG | + | chr4_2:19926763-19926782 | Msa0593600:CDS | 45.0% | |
AAGCTTCACCTTTCACCGTT+GGG | + | chr4_2:19926817-19926836 | Msa0593600:CDS | 45.0% | |
ACCGTTGGGAATTTCATTGC+CGG | + | chr4_2:19926831-19926850 | Msa0593600:CDS | 45.0% | |
ACCGGCAATGAAATTCCCAA+CGG | - | chr4_2:19926835-19926854 | None:intergenic | 45.0% | |
GCTTAAAGTCCAGAGGTGAA+TGG | - | chr4_2:19926885-19926904 | None:intergenic | 45.0% | |
!!! | TAAAAAATTCTAAAAAATTT+TGG | - | chr4_2:19924996-19925015 | None:intergenic | 5.0% |
!! | ACAAAAATTAAATTAAAAAT+AGG | + | chr4_2:19925161-19925180 | Msa0593600:intron | 5.0% |
!! | CAAAAATTAAATTAAAAATA+GGG | + | chr4_2:19925162-19925181 | Msa0593600:intron | 5.0% |
GCCCACAAGAAAAAGCTGCT+TGG | + | chr4_2:19923473-19923492 | Msa0593600:CDS | 50.0% | |
!! | GCCCAAGCAGCTTTTTCTTG+TGG | - | chr4_2:19923478-19923497 | None:intergenic | 50.0% |
GGCTAATGTCGTCGTTGCTA+AGG | + | chr4_2:19923813-19923832 | Msa0593600:CDS | 50.0% | |
CGTCGTTGCTAAGGATGGTT+CGG | + | chr4_2:19923822-19923841 | Msa0593600:CDS | 50.0% | |
GTCGTTGCTAAGGATGGTTC+GGG | + | chr4_2:19923823-19923842 | Msa0593600:CDS | 50.0% | |
!! | GGTAGCAAAAGTGTTGGAGG+TGG | + | chr4_2:19924003-19924022 | Msa0593600:CDS | 50.0% |
GGTTGCTGAACGGAAAGTAG+TGG | - | chr4_2:19924031-19924050 | None:intergenic | 50.0% | |
ACTTTCCGTTCAGCAACCGT+TGG | + | chr4_2:19924033-19924052 | Msa0593600:CDS | 50.0% | |
AGTGGGTCCTACATTGGATG+TGG | - | chr4_2:19925912-19925931 | None:intergenic | 50.0% | |
AATTGCTTGTGCTCCACGCT+AGG | + | chr4_2:19926167-19926186 | Msa0593600:intron | 50.0% | |
TTTGCAGCTGCTACTGGTGA+TGG | + | chr4_2:19926213-19926232 | Msa0593600:intron | 50.0% | |
CGGAACGAAATGCAACAGCT+TGG | - | chr4_2:19926290-19926309 | None:intergenic | 50.0% | |
AAAGACCGATAGATCGGAGC+CGG | - | chr4_2:19926310-19926329 | None:intergenic | 50.0% | |
! | CTGTGATGGTTTTTGCAGGC+GGG | - | chr4_2:19926482-19926501 | None:intergenic | 50.0% |
ACCATCACAGTTACCGCACA+AGG | + | chr4_2:19926492-19926511 | Msa0593600:CDS | 50.0% | |
TCCTTGTGCGGTAACTGTGA+TGG | - | chr4_2:19926496-19926515 | None:intergenic | 50.0% | |
! | TGGATCGGTTCTTCCTTGTG+CGG | - | chr4_2:19926508-19926527 | None:intergenic | 50.0% |
! | ATTTTTGCCACGGCCTACCA+AGG | - | chr4_2:19926611-19926630 | None:intergenic | 50.0% |
CAAGCTTCACCTTTCACCGT+TGG | + | chr4_2:19926816-19926835 | Msa0593600:CDS | 50.0% | |
! | CTTGTGGGCTACGGCACTTA+GGG | - | chr4_2:19923462-19923481 | None:intergenic | 55.0% |
! | TCTTGTGGGCTACGGCACTT+AGG | - | chr4_2:19923463-19923482 | None:intergenic | 55.0% |
AACTTCTTCCGCGGCTTCGA+AGG | + | chr4_2:19923792-19923811 | Msa0593600:CDS | 55.0% | |
!! | GACATTAGCCTTCGAAGCCG+CGG | - | chr4_2:19923803-19923822 | None:intergenic | 55.0% |
! | TGGTTCGGGCAAGTACACGA+CGG | + | chr4_2:19923837-19923856 | Msa0593600:CDS | 55.0% |
GATGCTGCACCAAGTGGTAG+TGG | + | chr4_2:19923874-19923893 | Msa0593600:CDS | 55.0% | |
!! | CTGCACCAAGTGGTAGTGGA+AGG | + | chr4_2:19923878-19923897 | Msa0593600:CDS | 55.0% |
TAACAACGGTCCTTCTCGGC+CGG | + | chr4_2:19924694-19924713 | Msa0593600:intron | 55.0% | |
AACCTTAACACCGGCCGAGA+AGG | - | chr4_2:19924707-19924726 | None:intergenic | 55.0% | |
TCGTTCCGGCTCCGATCTAT+CGG | + | chr4_2:19926302-19926321 | Msa0593600:CDS | 55.0% | |
AATCGTACCTTGGTAGGCCG+TGG | + | chr4_2:19926601-19926620 | Msa0593600:CDS | 55.0% | |
! | ACCCTGCTGGTTGGTTACCA+TGG | + | chr4_2:19926676-19926695 | Msa0593600:CDS | 55.0% |
CCCATGGTAACCAACCAGCA+GGG | - | chr4_2:19926680-19926699 | None:intergenic | 55.0% | |
! | CCCTGCTGGTTGGTTACCAT+GGG | + | chr4_2:19926677-19926696 | Msa0593600:CDS | 55.0% |
TCCCATGGTAACCAACCAGC+AGG | - | chr4_2:19926681-19926700 | None:intergenic | 55.0% | |
! | GCTGGTTGGTTACCATGGGA+TGG | + | chr4_2:19926681-19926700 | Msa0593600:CDS | 55.0% |
! | ACAGGTGTGCCATTCACCTC+TGG | + | chr4_2:19926873-19926892 | Msa0593600:CDS | 55.0% |
GGGCAAGTACACGACGGTGA+AGG | + | chr4_2:19923843-19923862 | Msa0593600:CDS | 60.0% | |
!! | ACTTGGTGCAGCATCCGTCG+CGG | - | chr4_2:19923869-19923888 | None:intergenic | 60.0% |
! | GTCCTTCTCGGCCGGTGTTA+AGG | + | chr4_2:19924702-19924721 | Msa0593600:intron | 60.0% |
GCGACGGATGCTGCACCAAG+TGG | + | chr4_2:19923868-19923887 | Msa0593600:CDS | 65.0% | |
CACGACGGTGAAGGCCGCGA+CGG | + | chr4_2:19923852-19923871 | Msa0593600:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 19923107 | 19927246 | 19923107 | ID=Msa0593600;Name=Msa0593600 |
chr4_2 | mRNA | 19923107 | 19927246 | 19923107 | ID=Msa0593600-mRNA-1;Parent=Msa0593600;Name=Msa0593600-mRNA-1;_AED=0.00;_eAED=0.00;_QI=101|1|1|1|1|1|2|344|509 |
chr4_2 | exon | 19923107 | 19924054 | 19923107 | ID=Msa0593600-mRNA-1:exon:5705;Parent=Msa0593600-mRNA-1 |
chr4_2 | exon | 19926220 | 19927246 | 19926220 | ID=Msa0593600-mRNA-1:exon:5706;Parent=Msa0593600-mRNA-1 |
chr4_2 | five_prime_UTR | 19923107 | 19923207 | 19923107 | ID=Msa0593600-mRNA-1:five_prime_utr;Parent=Msa0593600-mRNA-1 |
chr4_2 | CDS | 19923208 | 19924054 | 19923208 | ID=Msa0593600-mRNA-1:cds;Parent=Msa0593600-mRNA-1 |
chr4_2 | CDS | 19926220 | 19926902 | 19926220 | ID=Msa0593600-mRNA-1:cds;Parent=Msa0593600-mRNA-1 |
chr4_2 | three_prime_UTR | 19926903 | 19927246 | 19926903 | ID=Msa0593600-mRNA-1:three_prime_utr;Parent=Msa0593600-mRNA-1 |
Gene Sequence |
Protein sequence |