Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0259110 | ADD71138.1 | 97.664 | 428 | 6 | 1 | 1 | 428 | 25 | 448 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0259110 | sp|Q9SJE8|ALMT2_ARATH | 49.490 | 392 | 186 | 3 | 8 | 394 | 12 | 396 | 2.32e-141 | 416 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0259110 | D4NZK1 | 97.664 | 428 | 6 | 1 | 1 | 428 | 25 | 448 | 0.0 | 856 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0259110 | 0.850167 | 2.022342e-60 | -8.615850e-47 |
| Msa0034620 | Msa0259110 | 0.813606 | 2.350526e-51 | -8.615850e-47 |
| Msa0034770 | Msa0259110 | 0.814485 | 1.504409e-51 | -8.615850e-47 |
| Msa0038010 | Msa0259110 | 0.803099 | 4.096777e-49 | -8.615850e-47 |
| Msa0046390 | Msa0259110 | 0.830359 | 3.070566e-55 | -8.615850e-47 |
| Msa0048950 | Msa0259110 | 0.827417 | 1.582618e-54 | -8.615850e-47 |
| Msa0059880 | Msa0259110 | 0.840990 | 6.231663e-58 | -8.615850e-47 |
| Msa0085110 | Msa0259110 | 0.822355 | 2.475856e-53 | -8.615850e-47 |
| Msa0112620 | Msa0259110 | 0.830850 | 2.328465e-55 | -8.615850e-47 |
| Msa0129850 | Msa0259110 | 0.851798 | 7.019031e-61 | -8.615850e-47 |
| Msa0139230 | Msa0259110 | 0.813826 | 2.103056e-51 | -8.615850e-47 |
| Msa0143680 | Msa0259110 | 0.821301 | 4.343250e-53 | -8.615850e-47 |
| Msa0143710 | Msa0259110 | 0.846026 | 2.811744e-59 | -8.615850e-47 |
| Msa0143740 | Msa0259110 | 0.831084 | 2.039090e-55 | -8.615850e-47 |
| Msa0143770 | Msa0259110 | 0.832282 | 1.033108e-55 | -8.615850e-47 |
| Msa0150910 | Msa0259110 | 0.836836 | 7.407161e-57 | -8.615850e-47 |
| Msa0155850 | Msa0259110 | 0.832633 | 8.458897e-56 | -8.615850e-47 |
| Msa0177550 | Msa0259110 | 0.866380 | 2.974907e-65 | -8.615850e-47 |
| Msa0186200 | Msa0259110 | 0.800095 | 1.692382e-48 | -8.615850e-47 |
| Msa0190670 | Msa0259110 | 0.816775 | 4.648399e-52 | -8.615850e-47 |
| Msa0194230 | Msa0259110 | 0.824642 | 7.226834e-54 | -8.615850e-47 |
| Msa0197020 | Msa0259110 | 0.845529 | 3.837598e-59 | -8.615850e-47 |
| Msa0207640 | Msa0259110 | 0.809134 | 2.198357e-50 | -8.615850e-47 |
| Msa0259110 | Msa0259300 | 0.941499 | 3.736242e-101 | -8.615850e-47 |
| Msa0259110 | Msa0274250 | 0.833132 | 6.356813e-56 | -8.615850e-47 |
| Msa0259110 | Msa0274260 | 0.833691 | 4.611271e-56 | -8.615850e-47 |
| Msa0259110 | Msa0276580 | 0.837267 | 5.750623e-57 | -8.615850e-47 |
| Msa0259110 | Msa0278460 | 0.809791 | 1.588652e-50 | -8.615850e-47 |
| Msa0259110 | Msa0278950 | 0.807878 | 4.076131e-50 | -8.615850e-47 |
| Msa0259110 | Msa0287720 | 0.800317 | 1.525138e-48 | -8.615850e-47 |
| Msa0259110 | Msa0298270 | 0.808302 | 3.310304e-50 | -8.615850e-47 |
| Msa0259110 | Msa0314440 | 0.823668 | 1.223574e-53 | -8.615850e-47 |
| Msa0259110 | Msa0316600 | 0.845932 | 2.983668e-59 | -8.615850e-47 |
| Msa0259110 | Msa0342130 | 0.971414 | 3.982238e-133 | -8.615850e-47 |
| Msa0259110 | Msa0342160 | 0.944683 | 1.242890e-103 | -8.615850e-47 |
| Msa0259110 | Msa0346170 | 0.806887 | 6.611370e-50 | -8.615850e-47 |
| Msa0259110 | Msa0349910 | 0.805605 | 1.231512e-49 | -8.615850e-47 |
| Msa0259110 | Msa0366510 | 0.820578 | 6.369366e-53 | -8.615850e-47 |
| Msa0259110 | Msa0374040 | 0.824960 | 6.079999e-54 | -8.615850e-47 |
| Msa0259110 | Msa0396700 | 0.813313 | 2.727152e-51 | -8.615850e-47 |
| Msa0259110 | Msa0414480 | 0.840036 | 1.107305e-57 | -8.615850e-47 |
| Msa0259110 | Msa0418160 | 0.817876 | 2.627256e-52 | -8.615850e-47 |
| Msa0259110 | Msa0444250 | 0.826258 | 2.994785e-54 | -8.615850e-47 |
| Msa0259110 | Msa0464310 | 0.828183 | 1.035482e-54 | -8.615850e-47 |
| Msa0259110 | Msa0491770 | 0.803884 | 2.816559e-49 | -8.615850e-47 |
| Msa0259110 | Msa0491800 | 0.813269 | 2.787510e-51 | -8.615850e-47 |
| Msa0259110 | Msa0515130 | 0.844157 | 8.996161e-59 | -8.615850e-47 |
| Msa0259110 | Msa0515150 | 0.810702 | 1.010996e-50 | -8.615850e-47 |
| Msa0259110 | Msa0529420 | 0.805919 | 1.057856e-49 | -8.615850e-47 |
| Msa0259110 | Msa0535570 | 0.861598 | 9.168591e-64 | -8.615850e-47 |
| Msa0259110 | Msa0538440 | 0.834554 | 2.801992e-56 | -8.615850e-47 |
| Msa0259110 | Msa0538450 | 0.827122 | 1.862572e-54 | -8.615850e-47 |
| Msa0259110 | Msa0538520 | 0.827649 | 1.392650e-54 | -8.615850e-47 |
| Msa0259110 | Msa0538530 | 0.828315 | 9.628356e-55 | -8.615850e-47 |
| Msa0259110 | Msa0538650 | 0.804631 | 1.968821e-49 | -8.615850e-47 |
| Msa0259110 | Msa0543740 | 0.800220 | 1.596064e-48 | -8.615850e-47 |
| Msa0259110 | Msa0548820 | 0.805046 | 1.612261e-49 | -8.615850e-47 |
| Msa0259110 | Msa0549920 | 0.801449 | 8.959014e-49 | -8.615850e-47 |
| Msa0259110 | Msa0549930 | 0.803274 | 3.768957e-49 | -8.615850e-47 |
| Msa0259110 | Msa0579530 | 0.805315 | 1.416443e-49 | -8.615850e-47 |
| Msa0259110 | Msa0589740 | 0.803770 | 2.974982e-49 | -8.615850e-47 |
| Msa0259110 | Msa0591040 | 0.800420 | 1.453147e-48 | -8.615850e-47 |
| Msa0259110 | Msa0591490 | 0.848331 | 6.559638e-60 | -8.615850e-47 |
| Msa0259110 | Msa0594320 | 0.807909 | 4.015202e-50 | -8.615850e-47 |
| Msa0259110 | Msa0594330 | 0.812309 | 4.523873e-51 | -8.615850e-47 |
| Msa0259110 | Msa0605410 | 0.812843 | 3.457990e-51 | -8.615850e-47 |
| Msa0259110 | Msa0605470 | 0.818197 | 2.222100e-52 | -8.615850e-47 |
| Msa0259110 | Msa0609720 | 0.807501 | 4.901744e-50 | -8.615850e-47 |
| Msa0259110 | Msa0623980 | 0.809086 | 2.251817e-50 | -8.615850e-47 |
| Msa0259110 | Msa0631700 | 0.872086 | 4.166471e-67 | -8.615850e-47 |
| Msa0259110 | Msa0634290 | 0.811962 | 5.385357e-51 | -8.615850e-47 |
| Msa0259110 | Msa0643840 | 0.809681 | 1.678315e-50 | -8.615850e-47 |
| Msa0259110 | Msa0645150 | 0.861198 | 1.213753e-63 | -8.615850e-47 |
| Msa0259110 | Msa0646210 | 0.815063 | 1.120078e-51 | -8.615850e-47 |
| Msa0259110 | Msa0650310 | 0.850686 | 1.445858e-60 | -8.615850e-47 |
| Msa0259110 | Msa0650440 | 0.843844 | 1.091053e-58 | -8.615850e-47 |
| Msa0259110 | Msa0668220 | 0.800133 | 1.662336e-48 | -8.615850e-47 |
| Msa0259110 | Msa0670260 | 0.830964 | 2.183309e-55 | -8.615850e-47 |
| Msa0259110 | Msa0670360 | 0.860236 | 2.377364e-63 | -8.615850e-47 |
| Msa0259110 | Msa0671490 | 0.857549 | 1.513394e-62 | -8.615850e-47 |
| Msa0259110 | Msa0671640 | 0.832218 | 1.071796e-55 | -8.615850e-47 |
| Msa0259110 | Msa0678620 | 0.827805 | 1.277030e-54 | -8.615850e-47 |
| Msa0259110 | Msa0692310 | 0.809639 | 1.712909e-50 | -8.615850e-47 |
| Msa0259110 | Msa0711240 | 0.829532 | 4.883568e-55 | -8.615850e-47 |
| Msa0259110 | Msa0727480 | 0.812255 | 4.647652e-51 | -8.615850e-47 |
| Msa0259110 | Msa0735340 | 0.805309 | 1.420457e-49 | -8.615850e-47 |
| Msa0259110 | Msa0768670 | 0.807970 | 3.897314e-50 | -8.615850e-47 |
| Msa0259110 | Msa0777210 | 0.805789 | 1.126870e-49 | -8.615850e-47 |
| Msa0259110 | Msa0787860 | 0.810128 | 1.344773e-50 | -8.615850e-47 |
| Msa0259110 | Msa0792330 | 0.815691 | 8.121569e-52 | -8.615850e-47 |
| Msa0259110 | Msa0798240 | 0.805119 | 1.557004e-49 | -8.615850e-47 |
| Msa0259110 | Msa0802590 | 0.807286 | 5.443767e-50 | -8.615850e-47 |
| Msa0259110 | Msa0814160 | 0.810946 | 8.950229e-51 | -8.615850e-47 |
| Msa0259110 | Msa0814350 | 0.816726 | 4.765761e-52 | -8.615850e-47 |
| Msa0259110 | Msa0816140 | 0.809531 | 1.807360e-50 | -8.615850e-47 |
| Msa0259110 | Msa0824850 | 0.812787 | 3.556322e-51 | -8.615850e-47 |
| Msa0259110 | Msa0824860 | 0.832842 | 7.504433e-56 | -8.615850e-47 |
| Msa0259110 | Msa0836750 | 0.800866 | 1.178512e-48 | -8.615850e-47 |
| Msa0259110 | Msa0841130 | 0.809747 | 1.623971e-50 | -8.615850e-47 |
| Msa0259110 | Msa0854840 | 0.804265 | 2.347166e-49 | -8.615850e-47 |
| Msa0259110 | Msa0863840 | 0.834286 | 3.271735e-56 | -8.615850e-47 |
| Msa0259110 | Msa0863850 | 0.807255 | 5.528262e-50 | -8.615850e-47 |
| Msa0259110 | Msa0863860 | 0.806443 | 8.207090e-50 | -8.615850e-47 |
| Msa0259110 | Msa0864160 | 0.810488 | 1.124192e-50 | -8.615850e-47 |
| Msa0259110 | Msa0868820 | 0.809430 | 1.899420e-50 | -8.615850e-47 |
| Msa0259110 | Msa0883640 | 0.817671 | 2.922057e-52 | -8.615850e-47 |
| Msa0259110 | Msa0893840 | 0.804529 | 2.067567e-49 | -8.615850e-47 |
| Msa0259110 | Msa0896910 | 0.805674 | 1.191304e-49 | -8.615850e-47 |
| Msa0259110 | Msa0896920 | 0.805960 | 1.037038e-49 | -8.615850e-47 |
| Msa0259110 | Msa0902340 | 0.812554 | 3.998520e-51 | -8.615850e-47 |
| Msa0259110 | Msa0910830 | 0.837724 | 4.390274e-57 | -8.615850e-47 |
| Msa0259110 | Msa0932890 | 0.813614 | 2.341248e-51 | -8.615850e-47 |
| Msa0259110 | Msa0932930 | 0.813336 | 2.695675e-51 | -8.615850e-47 |
| Msa0259110 | Msa0941120 | 0.817103 | 3.922977e-52 | -8.615850e-47 |
| Msa0259110 | Msa0960090 | 0.817501 | 3.191239e-52 | -8.615850e-47 |
| Msa0259110 | Msa0985700 | 0.820509 | 6.608189e-53 | -8.615850e-47 |
| Msa0259110 | Msa1021620 | 0.812156 | 4.885517e-51 | -8.615850e-47 |
| Msa0259110 | Msa1022490 | 0.832006 | 1.208801e-55 | -8.615850e-47 |
| Msa0259110 | Msa1022510 | 0.841015 | 6.137538e-58 | -8.615850e-47 |
| Msa0259110 | Msa1024350 | 0.823272 | 1.514387e-53 | -8.615850e-47 |
| Msa0259110 | Msa1026050 | 0.838211 | 3.291409e-57 | -8.615850e-47 |
| Msa0259110 | Msa1030320 | 0.805633 | 1.215083e-49 | -8.615850e-47 |
| Msa0259110 | Msa1041630 | 0.812296 | 4.553644e-51 | -8.615850e-47 |
| Msa0259110 | Msa1061670 | 0.863277 | 2.791939e-64 | -8.615850e-47 |
| Msa0259110 | Msa1064940 | 0.831356 | 1.748161e-55 | -8.615850e-47 |
| Msa0259110 | Msa1076520 | -0.800071 | 1.711933e-48 | -8.615850e-47 |
| Msa0259110 | Msa1076830 | 0.809607 | 1.740197e-50 | -8.615850e-47 |
| Msa0259110 | Msa1081610 | 0.857619 | 1.442966e-62 | -8.615850e-47 |
| Msa0259110 | Msa1087370 | 0.829106 | 6.196847e-55 | -8.615850e-47 |
| Msa0259110 | Msa1087380 | 0.841081 | 5.900089e-58 | -8.615850e-47 |
| Msa0259110 | Msa1098100 | 0.813555 | 2.412119e-51 | -8.615850e-47 |
| Msa0259110 | Msa1106680 | 0.830393 | 3.012846e-55 | -8.615850e-47 |
| Msa0259110 | Msa1106960 | 0.865964 | 4.029584e-65 | -8.615850e-47 |
| Msa0259110 | Msa1109540 | 0.805240 | 1.468835e-49 | -8.615850e-47 |
| Msa0259110 | Msa1109880 | 0.829138 | 6.087631e-55 | -8.615850e-47 |
| Msa0259110 | Msa1109890 | 0.834043 | 3.764327e-56 | -8.615850e-47 |
| Msa0259110 | Msa1127840 | 0.810545 | 1.092734e-50 | -8.615850e-47 |
| Msa0259110 | Msa1138110 | 0.812375 | 4.375491e-51 | -8.615850e-47 |
| Msa0259110 | Msa1142600 | 0.807809 | 4.215075e-50 | -8.615850e-47 |
| Msa0259110 | Msa1166530 | 0.827873 | 1.229838e-54 | -8.615850e-47 |
| Msa0259110 | Msa1170340 | 0.815831 | 7.558321e-52 | -8.615850e-47 |
| Msa0259110 | Msa1181680 | 0.801256 | 9.810840e-49 | -8.615850e-47 |
| Msa0259110 | Msa1252630 | 0.835058 | 2.092829e-56 | -8.615850e-47 |
| Msa0259110 | Msa1286420 | 0.810439 | 1.152197e-50 | -8.615850e-47 |
| Msa0259110 | Msa1300610 | 0.800134 | 1.662073e-48 | -8.615850e-47 |
| Msa0259110 | Msa1323030 | 0.803245 | 3.822827e-49 | -8.615850e-47 |
| Msa0259110 | Msa1341030 | 0.835782 | 1.373602e-56 | -8.615850e-47 |
| Msa0259110 | Msa1355340 | 0.831026 | 2.107897e-55 | -8.615850e-47 |
| Msa0259110 | Msa1357750 | 0.828554 | 8.430157e-55 | -8.615850e-47 |
| Msa0259110 | Msa1357840 | 0.809314 | 2.012072e-50 | -8.615850e-47 |
| Msa0259110 | Msa1376070 | 0.819928 | 8.973927e-53 | -8.615850e-47 |
| Msa0259110 | Msa1377460 | 0.801655 | 8.127690e-49 | -8.615850e-47 |
| Msa0259110 | Msa1377520 | 0.803074 | 4.145563e-49 | -8.615850e-47 |
| Msa0259110 | Msa1386120 | 0.802721 | 4.904270e-49 | -8.615850e-47 |
| Msa0259110 | Msa1395150 | 0.832879 | 7.345536e-56 | -8.615850e-47 |
| Msa0259110 | Msa1402390 | 0.809310 | 2.015914e-50 | -8.615850e-47 |
| Msa0259110 | Msa1411550 | 0.822866 | 1.883756e-53 | -8.615850e-47 |
| Msa0259110 | Msa1421130 | 0.810496 | 1.119747e-50 | -8.615850e-47 |
| Msa0259110 | Msa1427670 | 0.803549 | 3.305447e-49 | -8.615850e-47 |
| Msa0259110 | Msa1456600 | 0.829655 | 4.558641e-55 | -8.615850e-47 |
| Msa0259110 | Msa1459610 | 0.801366 | 9.316156e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0259110 | MtrunA17_Chr2g0321971 | 95.794 | 428 | 14 | 1 | 1 | 428 | 29 | 452 | 0.0 | 846 |
| Msa0259110 | MtrunA17_Chr7g0267471 | 50.114 | 437 | 206 | 4 | 1 | 432 | 34 | 463 | 9.98e-150 | 434 |
| Msa0259110 | MtrunA17_Chr4g0025591 | 49.771 | 436 | 201 | 6 | 8 | 433 | 40 | 467 | 9.28e-146 | 424 |
| Msa0259110 | MtrunA17_Chr2g0321961 | 44.780 | 431 | 222 | 5 | 1 | 428 | 29 | 446 | 2.60e-134 | 394 |
| Msa0259110 | MtrunA17_Chr1g0188881 | 41.050 | 419 | 220 | 4 | 9 | 409 | 52 | 461 | 5.87e-111 | 335 |
| Msa0259110 | MtrunA17_Chr1g0188871 | 41.860 | 430 | 230 | 6 | 9 | 426 | 46 | 467 | 2.82e-110 | 333 |
| Msa0259110 | MtrunA17_Chr1g0212201 | 40.432 | 324 | 189 | 2 | 3 | 325 | 35 | 355 | 1.69e-81 | 261 |
| Msa0259110 | MtrunA17_Chr7g0259731 | 36.829 | 391 | 233 | 7 | 14 | 399 | 61 | 442 | 7.40e-78 | 248 |
| Msa0259110 | MtrunA17_Chr1g0212251 | 39.873 | 316 | 187 | 1 | 10 | 325 | 38 | 350 | 2.66e-77 | 249 |
| Msa0259110 | MtrunA17_Chr4g0054741 | 36.253 | 411 | 243 | 6 | 9 | 413 | 49 | 446 | 9.98e-76 | 246 |
| Msa0259110 | MtrunA17_Chr1g0212291 | 41.956 | 317 | 180 | 2 | 9 | 324 | 38 | 351 | 5.16e-72 | 236 |
| Msa0259110 | MtrunA17_Chr6g0484691 | 38.272 | 324 | 190 | 5 | 9 | 325 | 84 | 404 | 6.71e-61 | 208 |
| Msa0259110 | MtrunA17_Chr1g0210101 | 36.254 | 331 | 190 | 7 | 6 | 325 | 110 | 430 | 1.39e-59 | 204 |
| Msa0259110 | MtrunA17_Chr8g0390931 | 35.737 | 319 | 193 | 6 | 9 | 325 | 59 | 367 | 2.38e-58 | 201 |
| Msa0259110 | MtrunA17_Chr8g0390921 | 34.663 | 326 | 197 | 7 | 9 | 325 | 60 | 378 | 1.04e-54 | 191 |
| Msa0259110 | MtrunA17_Chr5g0400471 | 37.631 | 287 | 150 | 5 | 65 | 324 | 3 | 287 | 6.61e-54 | 186 |
| Msa0259110 | MtrunA17_Chr8g0390901 | 34.686 | 271 | 162 | 6 | 64 | 325 | 10 | 274 | 4.08e-44 | 160 |
| Msa0259110 | MtrunA17_Chr4g0054771 | 34.025 | 241 | 144 | 4 | 115 | 351 | 4 | 233 | 1.26e-43 | 157 |
| Msa0259110 | MtrunA17_Chr5g0400481 | 58.621 | 58 | 24 | 0 | 10 | 67 | 58 | 115 | 1.81e-16 | 75.5 |
| Msa0259110 | MtrunA17_Chr4g0054761 | 58.462 | 65 | 27 | 0 | 9 | 73 | 49 | 113 | 1.01e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0259110 | AT1G08440.1 | 49.490 | 392 | 186 | 3 | 8 | 394 | 12 | 396 | 2.36e-142 | 416 |
| Msa0259110 | AT2G27240.2 | 49.497 | 398 | 187 | 4 | 8 | 399 | 12 | 401 | 7.00e-142 | 414 |
| Msa0259110 | AT2G27240.1 | 47.381 | 420 | 189 | 4 | 8 | 399 | 12 | 427 | 8.87e-140 | 410 |
| Msa0259110 | AT1G08430.1 | 46.867 | 399 | 195 | 5 | 10 | 399 | 14 | 404 | 2.01e-139 | 409 |
| Msa0259110 | AT3G11680.2 | 48.762 | 404 | 195 | 6 | 7 | 406 | 36 | 431 | 2.95e-125 | 372 |
| Msa0259110 | AT3G11680.1 | 48.762 | 404 | 195 | 6 | 7 | 406 | 34 | 429 | 3.80e-125 | 372 |
| Msa0259110 | AT4G00910.1 | 38.337 | 433 | 239 | 4 | 4 | 412 | 53 | 481 | 3.12e-103 | 316 |
| Msa0259110 | AT4G17970.1 | 40.720 | 361 | 198 | 6 | 6 | 360 | 36 | 386 | 1.60e-86 | 275 |
| Msa0259110 | AT5G46600.1 | 38.462 | 364 | 214 | 4 | 3 | 360 | 36 | 395 | 3.02e-79 | 255 |
| Msa0259110 | AT5G46610.1 | 39.319 | 323 | 192 | 2 | 3 | 324 | 35 | 354 | 1.01e-78 | 254 |
| Msa0259110 | AT5G46610.2 | 35.913 | 323 | 179 | 3 | 3 | 324 | 35 | 330 | 3.43e-65 | 218 |
| Msa0259110 | AT5G46610.3 | 34.385 | 317 | 157 | 2 | 9 | 324 | 41 | 307 | 2.67e-60 | 204 |
| Msa0259110 | AT3G18440.1 | 33.151 | 365 | 225 | 9 | 9 | 359 | 79 | 438 | 3.38e-59 | 204 |
| Msa0259110 | AT1G18420.1 | 34.036 | 332 | 206 | 5 | 2 | 325 | 76 | 402 | 4.35e-59 | 203 |
| Msa0259110 | AT1G18420.2 | 34.259 | 324 | 200 | 5 | 10 | 325 | 1 | 319 | 1.10e-58 | 200 |
| Msa0259110 | AT1G68600.1 | 36.585 | 328 | 194 | 7 | 6 | 325 | 45 | 366 | 1.35e-57 | 198 |
| Msa0259110 | AT1G25480.1 | 36.747 | 332 | 196 | 7 | 2 | 325 | 52 | 377 | 2.21e-57 | 198 |
| Msa0259110 | AT2G17470.1 | 35.671 | 328 | 197 | 7 | 6 | 325 | 28 | 349 | 4.14e-56 | 194 |
| Msa0259110 | AT2G17470.2 | 35.671 | 328 | 197 | 7 | 6 | 325 | 50 | 371 | 7.20e-56 | 194 |
| Msa0259110 | AT4G17585.1 | 56.604 | 53 | 23 | 0 | 6 | 58 | 36 | 88 | 1.40e-13 | 68.6 |
Find 72 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAATGAATGACCCTTCT+AGG | 0.191366 | 2_2:+55941562 | None:intergenic |
| ATAATTGAACCTATACTTCT+TGG | 0.239685 | 2_2:-55940781 | Msa0259110:CDS |
| GATATTGTTGCCAAGGATAT+TGG | 0.241933 | 2_2:+55939749 | None:intergenic |
| AGTTGTTAAGGAAGCCATTA+AGG | 0.268610 | 2_2:+55939680 | None:intergenic |
| TATCGGATTGATGCCCTTAA+TGG | 0.282687 | 2_2:-55939694 | Msa0259110:CDS |
| TGTACAAAATTGACACATAA+TGG | 0.288079 | 2_2:-55939138 | Msa0259110:CDS |
| AAACCTCTCTATGATAGTTT+TGG | 0.300107 | 2_2:-55941493 | Msa0259110:CDS |
| TTGGCTGGTGTTCTTGGACT+TGG | 0.319754 | 2_2:-55940844 | Msa0259110:CDS |
| ATGAAGGCTAGATATGATTA+TGG | 0.325434 | 2_2:-55940598 | Msa0259110:CDS |
| GATAAGCACATTGCCTTGAT+AGG | 0.359354 | 2_2:+55939713 | None:intergenic |
| CTTGGAAAAGGTTTAAATAG+AGG | 0.383071 | 2_2:-55940880 | Msa0259110:CDS |
| TCATATCTAGCCTTCATTAG+AGG | 0.384146 | 2_2:+55940604 | None:intergenic |
| TTCTTGTGCCCTGTTTGGGC+TGG | 0.387615 | 2_2:-55940442 | Msa0259110:CDS |
| TATCAAGGCAATGTGCTTAT+CGG | 0.393258 | 2_2:-55939711 | Msa0259110:CDS |
| GATCATGGACCTTAGGTTTG+TGG | 0.393496 | 2_2:+55939401 | None:intergenic |
| TGGCAACAATATCAAAAGAT+TGG | 0.402570 | 2_2:-55939739 | Msa0259110:CDS |
| GTACCTTAGTGAAGTTGTTA+AGG | 0.410620 | 2_2:+55939668 | None:intergenic |
| TGGGAAAAGAAGATCCTAGA+AGG | 0.411010 | 2_2:-55941576 | Msa0259110:CDS |
| TAATTGACACTGCACAAGAT+AGG | 0.418272 | 2_2:-55940513 | Msa0259110:CDS |
| CTACTATCACTGCATGTTTG+TGG | 0.427671 | 2_2:+55939195 | None:intergenic |
| AAACTTGCCTACAGAGAATT+CGG | 0.429274 | 2_2:+55941429 | None:intergenic |
| TTGTGCCCTGTTTGGGCTGG+TGG | 0.433334 | 2_2:-55940439 | Msa0259110:CDS |
| ATTATGATTCCAAGAAGTAT+AGG | 0.433596 | 2_2:+55940772 | None:intergenic |
| AGATCACCACCAGCCCAAAC+AGG | 0.433992 | 2_2:+55940433 | None:intergenic |
| GTACAAAATTGACACATAAT+GGG | 0.436412 | 2_2:-55939137 | Msa0259110:CDS |
| GGCTAGATATGATTATGGTT+TGG | 0.440433 | 2_2:-55940593 | Msa0259110:CDS |
| GAATCTGAAACGACCATGGC+AGG | 0.446207 | 2_2:+55939771 | None:intergenic |
| GATGTTGCAGCTGAAAGAAT+TGG | 0.448481 | 2_2:-55941596 | Msa0259110:CDS |
| GTTGTTAAGGAAGCCATTAA+GGG | 0.460812 | 2_2:+55939681 | None:intergenic |
| AGTAGCATTTGCTATTACAT+TGG | 0.462751 | 2_2:-55941536 | Msa0259110:CDS |
| GTTTCAGATTCCAATATCCT+TGG | 0.467661 | 2_2:-55939759 | Msa0259110:CDS |
| ATTAAGATGAGCATAGAAAC+AGG | 0.468944 | 2_2:-55939513 | Msa0259110:CDS |
| AATGAAGCCACGGTTACAAC+AGG | 0.480765 | 2_2:+55939336 | None:intergenic |
| TTTGAATTATTTCAGCTGCA+GGG | 0.486846 | 2_2:-55940648 | Msa0259110:intron |
| TCGATTTATACCTCTAATGA+AGG | 0.491939 | 2_2:-55940614 | Msa0259110:CDS |
| CATGATCAAAACAAAATTGT+GGG | 0.502020 | 2_2:-55939385 | Msa0259110:CDS |
| TCTATGCTCATCTTAATGCA+TGG | 0.508658 | 2_2:+55939519 | None:intergenic |
| GTGCAGTGTCAATTATCTCA+TGG | 0.511026 | 2_2:+55940521 | None:intergenic |
| GCAGGAGCAACACTTGGAAA+AGG | 0.511844 | 2_2:-55940892 | Msa0259110:intron |
| TGGACTTGGATCTTATTACA+TGG | 0.514673 | 2_2:-55940830 | Msa0259110:CDS |
| TGGTGGATTAATTTCTGTGT+TGG | 0.515117 | 2_2:-55940473 | Msa0259110:CDS |
| GTAACAACAATTCTAGTTGG+TGG | 0.515822 | 2_2:-55940490 | Msa0259110:CDS |
| CTTCCTTAACAACTTCACTA+AGG | 0.516652 | 2_2:-55939671 | Msa0259110:intron |
| ATGTTGCAGCTGAAAGAATT+GGG | 0.527158 | 2_2:-55941595 | Msa0259110:CDS |
| TGAGTTTCTGCTGAGGTTGG+TGG | 0.528304 | 2_2:+55939447 | None:intergenic |
| AAAAGATTGGAAACCTATCA+AGG | 0.530845 | 2_2:-55939726 | Msa0259110:CDS |
| AGGGTAACAACAATTCTAGT+TGG | 0.536338 | 2_2:-55940493 | Msa0259110:CDS |
| CCATGATCAAAACAAAATTG+TGG | 0.536457 | 2_2:-55939386 | Msa0259110:CDS |
| AATTGACACTGCACAAGATA+GGG | 0.540293 | 2_2:-55940512 | Msa0259110:CDS |
| GGAAGACACAAATTTGTTTG+AGG | 0.543623 | 2_2:-55939364 | Msa0259110:CDS |
| AAAACAAGTCGAAGATAACT+TGG | 0.544545 | 2_2:-55940168 | Msa0259110:intron |
| CTTAGCAAAATTTAAGAACA+AGG | 0.557015 | 2_2:-55939253 | Msa0259110:CDS |
| TTGAATTATTTCAGCTGCAG+GGG | 0.563412 | 2_2:-55940647 | Msa0259110:intron |
| GTTGTCTCCGAATTCTCTGT+AGG | 0.565117 | 2_2:-55941436 | Msa0259110:intron |
| GCACATGCAGGAGCAACACT+TGG | 0.568214 | 2_2:-55940898 | Msa0259110:intron |
| ATGTGAGTTTCTGCTGAGGT+TGG | 0.568552 | 2_2:+55939444 | None:intergenic |
| GCAAGGTGGGAACCCTGCCA+TGG | 0.570019 | 2_2:-55939784 | Msa0259110:CDS |
| TCAAATAAATCATTTATGCA+AGG | 0.574471 | 2_2:-55940212 | Msa0259110:CDS |
| ATGGTTCATACAATTTCAAG+AGG | 0.574977 | 2_2:-55940811 | Msa0259110:CDS |
| AGATTTATGCCACAAACCTA+AGG | 0.581612 | 2_2:-55939410 | Msa0259110:CDS |
| ATCAAGCAATAATGAAGCCA+CGG | 0.596047 | 2_2:+55939326 | None:intergenic |
| TTAATTATAATAACATGTTG+TGG | 0.607316 | 2_2:+55939168 | None:intergenic |
| GGGAAAAGAAGATCCTAGAA+GGG | 0.628854 | 2_2:-55941575 | Msa0259110:CDS |
| GATGAGCATAGAAACAGGAA+AGG | 0.631774 | 2_2:-55939508 | Msa0259110:CDS |
| CAAACATGCAGTGATAGTAG+TGG | 0.633845 | 2_2:-55939192 | Msa0259110:CDS |
| GAACCAAAACTATCATAGAG+AGG | 0.635110 | 2_2:+55941490 | None:intergenic |
| TGCAATGTGAGTTTCTGCTG+AGG | 0.637883 | 2_2:+55939440 | None:intergenic |
| TGATTCTGCAAGTTTCTCAG+TGG | 0.649200 | 2_2:+55939293 | None:intergenic |
| ATTGGAATCTGAAACGACCA+TGG | 0.657737 | 2_2:+55939767 | None:intergenic |
| AATCTGAAACGACCATGGCA+GGG | 0.657967 | 2_2:+55939772 | None:intergenic |
| GGTTGTTCCTGTTGTAACCG+TGG | 0.667584 | 2_2:-55939343 | Msa0259110:CDS |
| GATCACCACCAGCCCAAACA+GGG | 0.679414 | 2_2:+55940434 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATTACATAGAAAAAA+TGG | - | chr2_2:55939472-55939491 | Msa0259110:CDS | 10.0% |
| !!! | AATTTACAATAACATAATTT+TGG | + | chr2_2:55940604-55940623 | None:intergenic | 10.0% |
| !!! | AATTTTGTAAATTGTGATTA+TGG | - | chr2_2:55940387-55940406 | Msa0259110:CDS | 15.0% |
| !! | TTAATTATAATAACATGTTG+TGG | + | chr2_2:55941567-55941586 | None:intergenic | 15.0% |
| !!! | TTATTCTATGTTTCTACAAT+CGG | + | chr2_2:55939694-55939713 | None:intergenic | 20.0% |
| !!! | GAATAAATAGTATTTTGTAG+AGG | - | chr2_2:55939708-55939727 | Msa0259110:CDS | 20.0% |
| !!! | TATTTGATAATTTCACTAGT+AGG | - | chr2_2:55940018-55940037 | Msa0259110:intron | 20.0% |
| !! | TCAAAAAACATTGAAAAACT+TGG | - | chr2_2:55940335-55940354 | Msa0259110:intron | 20.0% |
| !! | TGTTGAAATTGATTAATTCT+TGG | - | chr2_2:55940446-55940465 | Msa0259110:CDS | 20.0% |
| !! | ATTAATTCTTGGAAAATTGT+AGG | - | chr2_2:55940457-55940476 | Msa0259110:CDS | 20.0% |
| !! | TCAAATAAATCATTTATGCA+AGG | - | chr2_2:55940520-55940539 | Msa0259110:CDS | 20.0% |
| !! | ATATATTGAGAAATATTCCA+TGG | + | chr2_2:55940653-55940672 | None:intergenic | 20.0% |
| !!! | ATTAGTTTAATACCTTTTGT+AGG | - | chr2_2:55940917-55940936 | Msa0259110:intron | 20.0% |
| !! | ATCAATATCAATCCAAAAAA+CGG | - | chr2_2:55941260-55941279 | Msa0259110:intron | 20.0% |
| !!! | GTTTTGTTTGTTGTTTTCTT+TGG | - | chr2_2:55939322-55939341 | Msa0259110:CDS | 25.0% |
| !!! | GTTTTAATCATGCATGTTTT+TGG | - | chr2_2:55939344-55939363 | Msa0259110:CDS | 25.0% |
| ! | TAGTAGACACTAAACTTAAA+TGG | + | chr2_2:55939375-55939394 | None:intergenic | 25.0% |
| !!! | TTTTTCTCTAGTCTTAACTT+TGG | - | chr2_2:55939397-55939416 | Msa0259110:CDS | 25.0% |
| ! | ATCTTAATTCCAAAAATGCA+TGG | - | chr2_2:55939569-55939588 | Msa0259110:intron | 25.0% |
| ! | ATAATTGAACCTATACTTCT+TGG | - | chr2_2:55939951-55939970 | Msa0259110:intron | 25.0% |
| !! | ATTATGATTCCAAGAAGTAT+AGG | + | chr2_2:55939963-55939982 | None:intergenic | 25.0% |
| !! | GTTTATCTTGACATTTTGTT+TGG | - | chr2_2:55940166-55940185 | Msa0259110:intron | 25.0% |
| ! | TCTACTACGATTTACATATA+CGG | - | chr2_2:55940837-55940856 | Msa0259110:CDS | 25.0% |
| !! | AAGTTTAGTAGAGTATTTCT+TGG | - | chr2_2:55941112-55941131 | Msa0259110:intron | 25.0% |
| !!! | ACTTTTTTTATAGACACCAA+AGG | - | chr2_2:55941167-55941186 | Msa0259110:intron | 25.0% |
| !!! | ATTTTGCTTTTGATTTCCTT+TGG | + | chr2_2:55941186-55941205 | None:intergenic | 25.0% |
| ! | CATGATCAAAACAAAATTGT+GGG | - | chr2_2:55941347-55941366 | Msa0259110:intron | 25.0% |
| !! | CTTGTTCTTAAATTTTGCTA+AGG | + | chr2_2:55941481-55941500 | None:intergenic | 25.0% |
| ! | CTTAGCAAAATTTAAGAACA+AGG | - | chr2_2:55941479-55941498 | Msa0259110:CDS | 25.0% |
| !! | TTATGTGTCAATTTTGTACA+AGG | + | chr2_2:55941594-55941613 | None:intergenic | 25.0% |
| ! | TGTACAAAATTGACACATAA+TGG | - | chr2_2:55941594-55941613 | Msa0259110:CDS | 25.0% |
| ! | GTACAAAATTGACACATAAT+GGG | - | chr2_2:55941595-55941614 | Msa0259110:CDS | 25.0% |
| !! | AGTAGCATTTGCTATTACAT+TGG | - | chr2_2:55939196-55939215 | Msa0259110:CDS | 30.0% |
| ! | AAACCTCTCTATGATAGTTT+TGG | - | chr2_2:55939239-55939258 | Msa0259110:CDS | 30.0% |
| !! | CATATTATTTTGCCACTTGT+TGG | - | chr2_2:55939432-55939451 | Msa0259110:CDS | 30.0% |
| TTAATTCCAAAAATGCATGG+TGG | - | chr2_2:55939572-55939591 | Msa0259110:intron | 30.0% | |
| !!! | ATCGGTCATAGATTTTTTTG+TGG | + | chr2_2:55939676-55939695 | None:intergenic | 30.0% |
| !! | ATGCGAACTTGAATTTTAAC+TGG | - | chr2_2:55939788-55939807 | Msa0259110:CDS | 30.0% |
| CTTGGAAAAGGTTTAAATAG+AGG | - | chr2_2:55939852-55939871 | Msa0259110:intron | 30.0% | |
| ! | TAGAGGTTTAGCAACATTTT+TGG | - | chr2_2:55939869-55939888 | Msa0259110:intron | 30.0% |
| ATGGTTCATACAATTTCAAG+AGG | - | chr2_2:55939921-55939940 | Msa0259110:intron | 30.0% | |
| ! | TTTTGAATTATTTCAGCTGC+AGG | - | chr2_2:55940083-55940102 | Msa0259110:intron | 30.0% |
| TTTGAATTATTTCAGCTGCA+GGG | - | chr2_2:55940084-55940103 | Msa0259110:intron | 30.0% | |
| TCGATTTATACCTCTAATGA+AGG | - | chr2_2:55940118-55940137 | Msa0259110:intron | 30.0% | |
| ATGAAGGCTAGATATGATTA+TGG | - | chr2_2:55940134-55940153 | Msa0259110:intron | 30.0% | |
| ! | AAACTTGGCAACTTTTTAGA+AGG | - | chr2_2:55940350-55940369 | Msa0259110:intron | 30.0% |
| ! | TCTTGGAAAATTGTAGGTTT+TGG | - | chr2_2:55940463-55940482 | Msa0259110:CDS | 30.0% |
| !!! | GGTTTTGGAGATGAATATTT+TGG | - | chr2_2:55940478-55940497 | Msa0259110:CDS | 30.0% |
| AAAACAAGTCGAAGATAACT+TGG | - | chr2_2:55940564-55940583 | Msa0259110:CDS | 30.0% | |
| TCATCAAATCAAAATGTCCA+TGG | - | chr2_2:55940633-55940652 | Msa0259110:CDS | 30.0% | |
| TCAAATATGTTGAAAAGTCG+TGG | + | chr2_2:55940809-55940828 | None:intergenic | 30.0% | |
| CTACTACGATTTACATATAC+GGG | - | chr2_2:55940838-55940857 | Msa0259110:CDS | 30.0% | |
| TTGCAAAATTGACCTACAAA+AGG | + | chr2_2:55940932-55940951 | None:intergenic | 30.0% | |
| ! | TTTTGTAGGTCAATTTTGCA+AGG | - | chr2_2:55940931-55940950 | Msa0259110:intron | 30.0% |
| ! | ATCTTTTGATATTGTTGCCA+AGG | + | chr2_2:55940993-55941012 | None:intergenic | 30.0% |
| TGGCAACAATATCAAAAGAT+TGG | - | chr2_2:55940993-55941012 | Msa0259110:intron | 30.0% | |
| AAAAGATTGGAAACCTATCA+AGG | - | chr2_2:55941006-55941025 | Msa0259110:intron | 30.0% | |
| ATTAAGATGAGCATAGAAAC+AGG | - | chr2_2:55941219-55941238 | Msa0259110:intron | 30.0% | |
| !!! | CCACAATTTTGTTTTGATCA+TGG | + | chr2_2:55941349-55941368 | None:intergenic | 30.0% |
| CCATGATCAAAACAAAATTG+TGG | - | chr2_2:55941346-55941365 | Msa0259110:intron | 30.0% | |
| ! | GTTCTTAAATTTTGCTAAGG+TGG | + | chr2_2:55941478-55941497 | None:intergenic | 30.0% |
| ATGTTGCAGCTGAAAGAATT+GGG | - | chr2_2:55939137-55939156 | Msa0259110:CDS | 35.0% | |
| AAAGAATGAATGACCCTTCT+AGG | + | chr2_2:55939173-55939192 | None:intergenic | 35.0% | |
| GAACCAAAACTATCATAGAG+AGG | + | chr2_2:55939245-55939264 | None:intergenic | 35.0% | |
| !!! | TTTTGGTTCTTCTGCAATGT+GGG | - | chr2_2:55939256-55939275 | Msa0259110:CDS | 35.0% |
| AAACTTGCCTACAGAGAATT+CGG | + | chr2_2:55939306-55939325 | None:intergenic | 35.0% | |
| TATGATCTTGATCCAACAAG+TGG | + | chr2_2:55939447-55939466 | None:intergenic | 35.0% | |
| CTTGTTGGATCAAGATCATA+CGG | - | chr2_2:55939447-55939466 | Msa0259110:CDS | 35.0% | |
| TTGTGGACATACGTAAATGT+TGG | + | chr2_2:55939659-55939678 | None:intergenic | 35.0% | |
| !!! | CGAACTTGAATTTTAACTGG+TGG | - | chr2_2:55939791-55939810 | Msa0259110:CDS | 35.0% |
| TTTGATTATGTTGCACATGC+AGG | - | chr2_2:55939822-55939841 | Msa0259110:intron | 35.0% | |
| TGGACTTGGATCTTATTACA+TGG | - | chr2_2:55939902-55939921 | Msa0259110:intron | 35.0% | |
| TTGAATTATTTCAGCTGCAG+GGG | - | chr2_2:55940085-55940104 | Msa0259110:intron | 35.0% | |
| ! | TCATATCTAGCCTTCATTAG+AGG | + | chr2_2:55940131-55940150 | None:intergenic | 35.0% |
| GGCTAGATATGATTATGGTT+TGG | - | chr2_2:55940139-55940158 | Msa0259110:intron | 35.0% | |
| TAATTGACACTGCACAAGAT+AGG | - | chr2_2:55940219-55940238 | Msa0259110:CDS | 35.0% | |
| AATTGACACTGCACAAGATA+GGG | - | chr2_2:55940220-55940239 | Msa0259110:CDS | 35.0% | |
| AGGGTAACAACAATTCTAGT+TGG | - | chr2_2:55940239-55940258 | Msa0259110:CDS | 35.0% | |
| ! | GTAACAACAATTCTAGTTGG+TGG | - | chr2_2:55940242-55940261 | Msa0259110:CDS | 35.0% |
| !! | TGGTGGATTAATTTCTGTGT+TGG | - | chr2_2:55940259-55940278 | Msa0259110:intron | 35.0% |
| !!! | TATTTTGGAACACTAGATGC+TGG | - | chr2_2:55940493-55940512 | Msa0259110:CDS | 35.0% |
| AGACATGTCAATGTTCAACT+AGG | + | chr2_2:55940707-55940726 | None:intergenic | 35.0% | |
| ! | TGTCTCCAATTTAGTTCATG+TGG | - | chr2_2:55940722-55940741 | Msa0259110:intron | 35.0% |
| ! | GTCTCCAATTTAGTTCATGT+GGG | - | chr2_2:55940723-55940742 | Msa0259110:intron | 35.0% |
| ! | TCTCCAATTTAGTTCATGTG+GGG | - | chr2_2:55940724-55940743 | Msa0259110:intron | 35.0% |
| TAAGTCAGAGTAGACAAAGA+CGG | + | chr2_2:55940894-55940913 | None:intergenic | 35.0% | |
| GTTTCAGATTCCAATATCCT+TGG | - | chr2_2:55940973-55940992 | Msa0259110:intron | 35.0% | |
| GATATTGTTGCCAAGGATAT+TGG | + | chr2_2:55940986-55941005 | None:intergenic | 35.0% | |
| TATCAAGGCAATGTGCTTAT+CGG | - | chr2_2:55941021-55941040 | Msa0259110:intron | 35.0% | |
| GTTGTTAAGGAAGCCATTAA+GGG | + | chr2_2:55941054-55941073 | None:intergenic | 35.0% | |
| AGTTGTTAAGGAAGCCATTA+AGG | + | chr2_2:55941055-55941074 | None:intergenic | 35.0% | |
| CTTCCTTAACAACTTCACTA+AGG | - | chr2_2:55941061-55941080 | Msa0259110:intron | 35.0% | |
| GTACCTTAGTGAAGTTGTTA+AGG | + | chr2_2:55941067-55941086 | None:intergenic | 35.0% | |
| TCTATGCTCATCTTAATGCA+TGG | + | chr2_2:55941216-55941235 | None:intergenic | 35.0% | |
| AGATTTATGCCACAAACCTA+AGG | - | chr2_2:55941322-55941341 | Msa0259110:intron | 35.0% | |
| !!! | TTGTTTTGATCATGGACCTT+AGG | + | chr2_2:55941341-55941360 | None:intergenic | 35.0% |
| ! | GGAAGACACAAATTTGTTTG+AGG | - | chr2_2:55941368-55941387 | Msa0259110:intron | 35.0% |
| ATCAAGCAATAATGAAGCCA+CGG | + | chr2_2:55941409-55941428 | None:intergenic | 35.0% | |
| GATGTTGCAGCTGAAAGAAT+TGG | - | chr2_2:55939136-55939155 | Msa0259110:CDS | 40.0% | |
| TGGGAAAAGAAGATCCTAGA+AGG | - | chr2_2:55939156-55939175 | Msa0259110:CDS | 40.0% | |
| GGGAAAAGAAGATCCTAGAA+GGG | - | chr2_2:55939157-55939176 | Msa0259110:CDS | 40.0% | |
| !!! | GTTTTGGTTCTTCTGCAATG+TGG | - | chr2_2:55939255-55939274 | Msa0259110:CDS | 40.0% |
| TCACGCATTCAACACATTGA+TGG | + | chr2_2:55939521-55939540 | None:intergenic | 40.0% | |
| ! | TAAGTGCCACCATGCATTTT+TGG | + | chr2_2:55939581-55939600 | None:intergenic | 40.0% |
| !!! | GGTTTAGCAACATTTTTGGC+TGG | - | chr2_2:55939873-55939892 | Msa0259110:intron | 40.0% |
| !!! | ACATTTTTGGCTGGTGTTCT+TGG | - | chr2_2:55939882-55939901 | Msa0259110:intron | 40.0% |
| GTGCAGTGTCAATTATCTCA+TGG | + | chr2_2:55940214-55940233 | None:intergenic | 40.0% | |
| ! | ACATTTTCTTGTGCCCTGTT+TGG | - | chr2_2:55940285-55940304 | Msa0259110:intron | 40.0% |
| ! | CATTTTCTTGTGCCCTGTTT+GGG | - | chr2_2:55940286-55940305 | Msa0259110:intron | 40.0% |
| ! | AAGTCGAAGATAACTTGGTG+AGG | - | chr2_2:55940569-55940588 | Msa0259110:CDS | 40.0% |
| AGTCCCCACATGAACTAAAT+TGG | + | chr2_2:55940730-55940749 | None:intergenic | 40.0% | |
| ! | TGTAGGTCAATTTTGCAAGG+TGG | - | chr2_2:55940934-55940953 | Msa0259110:intron | 40.0% |
| ! | GTAGGTCAATTTTGCAAGGT+GGG | - | chr2_2:55940935-55940954 | Msa0259110:intron | 40.0% |
| ! | ATTGGAATCTGAAACGACCA+TGG | + | chr2_2:55940968-55940987 | None:intergenic | 40.0% |
| GATAAGCACATTGCCTTGAT+AGG | + | chr2_2:55941022-55941041 | None:intergenic | 40.0% | |
| TATCGGATTGATGCCCTTAA+TGG | - | chr2_2:55941038-55941057 | Msa0259110:intron | 40.0% | |
| GATGAGCATAGAAACAGGAA+AGG | - | chr2_2:55941224-55941243 | Msa0259110:intron | 40.0% | |
| TGATTCTGCAAGTTTCTCAG+TGG | + | chr2_2:55941442-55941461 | None:intergenic | 40.0% | |
| CTACTATCACTGCATGTTTG+TGG | + | chr2_2:55941540-55941559 | None:intergenic | 40.0% | |
| CAAACATGCAGTGATAGTAG+TGG | - | chr2_2:55941540-55941559 | Msa0259110:CDS | 40.0% | |
| ! | GTGTCAATTTTGTACAAGGC+TGG | + | chr2_2:55941590-55941609 | None:intergenic | 40.0% |
| GTTGTCTCCGAATTCTCTGT+AGG | - | chr2_2:55939296-55939315 | Msa0259110:CDS | 45.0% | |
| !! | TTTTTAGAAGGTGCGCAAGC+AGG | - | chr2_2:55940362-55940381 | Msa0259110:intron | 45.0% |
| ! | AATCTGAAACGACCATGGCA+GGG | + | chr2_2:55940963-55940982 | None:intergenic | 45.0% |
| !!! | AGGTTGGTGGAACCGTTTTT+TGG | + | chr2_2:55941275-55941294 | None:intergenic | 45.0% |
| ATGTGAGTTTCTGCTGAGGT+TGG | + | chr2_2:55941291-55941310 | None:intergenic | 45.0% | |
| TGCAATGTGAGTTTCTGCTG+AGG | + | chr2_2:55941295-55941314 | None:intergenic | 45.0% | |
| GATCATGGACCTTAGGTTTG+TGG | + | chr2_2:55941334-55941353 | None:intergenic | 45.0% | |
| AATGAAGCCACGGTTACAAC+AGG | + | chr2_2:55941399-55941418 | None:intergenic | 45.0% | |
| !! | TAAATAAATACTAAAAAAAA+TGG | + | chr2_2:55939750-55939769 | None:intergenic | 5.0% |
| !! | AAAAAAAATAAAAATTGTAT+TGG | + | chr2_2:55940065-55940084 | None:intergenic | 5.0% |
| GCAGGAGCAACACTTGGAAA+AGG | - | chr2_2:55939840-55939859 | Msa0259110:intron | 50.0% | |
| TTGGCTGGTGTTCTTGGACT+TGG | - | chr2_2:55939888-55939907 | Msa0259110:intron | 50.0% | |
| ! | GAATCTGAAACGACCATGGC+AGG | + | chr2_2:55940964-55940983 | None:intergenic | 50.0% |
| TGAGTTTCTGCTGAGGTTGG+TGG | + | chr2_2:55941288-55941307 | None:intergenic | 50.0% | |
| GGTTGTTCCTGTTGTAACCG+TGG | - | chr2_2:55941389-55941408 | Msa0259110:intron | 50.0% | |
| GCACATGCAGGAGCAACACT+TGG | - | chr2_2:55939834-55939853 | Msa0259110:intron | 55.0% | |
| TTCTTGTGCCCTGTTTGGGC+TGG | - | chr2_2:55940290-55940309 | Msa0259110:intron | 55.0% | |
| GATCACCACCAGCCCAAACA+GGG | + | chr2_2:55940301-55940320 | None:intergenic | 55.0% | |
| AGATCACCACCAGCCCAAAC+AGG | + | chr2_2:55940302-55940321 | None:intergenic | 55.0% | |
| ! | TTGTGCCCTGTTTGGGCTGG+TGG | - | chr2_2:55940293-55940312 | Msa0259110:intron | 60.0% |
| GCAAGGTGGGAACCCTGCCA+TGG | - | chr2_2:55940948-55940967 | Msa0259110:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 55939128 | 55941626 | 55939128 | ID=Msa0259110;Name=Msa0259110 |
| chr2_2 | mRNA | 55939128 | 55941626 | 55939128 | ID=Msa0259110-mRNA-1;Parent=Msa0259110;Name=Msa0259110-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0|0|1|1|1|6|0|440 |
| chr2_2 | exon | 55941437 | 55941626 | 55941437 | ID=Msa0259110-mRNA-1:exon:16909;Parent=Msa0259110-mRNA-1 |
| chr2_2 | exon | 55940761 | 55940910 | 55940761 | ID=Msa0259110-mRNA-1:exon:16908;Parent=Msa0259110-mRNA-1 |
| chr2_2 | exon | 55940371 | 55940655 | 55940371 | ID=Msa0259110-mRNA-1:exon:16907;Parent=Msa0259110-mRNA-1 |
| chr2_2 | exon | 55940169 | 55940275 | 55940169 | ID=Msa0259110-mRNA-1:exon:16906;Parent=Msa0259110-mRNA-1 |
| chr2_2 | exon | 55939672 | 55939815 | 55939672 | ID=Msa0259110-mRNA-1:exon:16905;Parent=Msa0259110-mRNA-1 |
| chr2_2 | exon | 55939128 | 55939574 | 55939128 | ID=Msa0259110-mRNA-1:exon:16904;Parent=Msa0259110-mRNA-1 |
| chr2_2 | CDS | 55941437 | 55941626 | 55941437 | ID=Msa0259110-mRNA-1:cds;Parent=Msa0259110-mRNA-1 |
| chr2_2 | CDS | 55940761 | 55940910 | 55940761 | ID=Msa0259110-mRNA-1:cds;Parent=Msa0259110-mRNA-1 |
| chr2_2 | CDS | 55940371 | 55940655 | 55940371 | ID=Msa0259110-mRNA-1:cds;Parent=Msa0259110-mRNA-1 |
| chr2_2 | CDS | 55940169 | 55940275 | 55940169 | ID=Msa0259110-mRNA-1:cds;Parent=Msa0259110-mRNA-1 |
| chr2_2 | CDS | 55939672 | 55939815 | 55939672 | ID=Msa0259110-mRNA-1:cds;Parent=Msa0259110-mRNA-1 |
| chr2_2 | CDS | 55939128 | 55939574 | 55939128 | ID=Msa0259110-mRNA-1:cds;Parent=Msa0259110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
