AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0813500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0813500 MtrunA17_Chr5g0431171 98.153 1083 19 1 1 1082 1 1083 0.0 2204
Msa0813500 MtrunA17_Chr5g0431151 97.509 1084 25 2 1 1082 1 1084 0.0 2182
Msa0813500 MtrunA17_Chr0c01g0489601 84.791 743 68 5 283 1025 1 698 0.0 1253
Msa0813500 MtrunA17_Chr0c01g0489611 95.238 84 4 0 186 269 7 90 2.35e-51 175
Msa0813500 MtrunA17_Chr8g0352371 40.217 184 102 2 492 675 6 181 3.96e-33 137
Msa0813500 MtrunA17_Chr4g0074481 33.333 207 110 7 485 674 37 232 4.58e-23 103
Msa0813500 MtrunA17_Chr5g0444711 29.167 168 107 5 464 628 57 215 1.30e-14 77.8
Msa0813500 MtrunA17_Chr8g0386251 34.395 157 97 3 79 229 15 171 2.27e-13 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0813500 AT5G06460.1 81.721 1034 187 1 50 1081 43 1076 0.0 1794
Msa0813500 AT2G30110.1 83.006 1018 173 0 65 1082 63 1080 0.0 1788
Msa0813500 AT2G21470.1 38.947 190 108 2 486 675 4 185 8.84e-32 133
Msa0813500 AT2G21470.3 38.947 190 108 2 486 675 4 185 1.05e-31 132
Msa0813500 AT2G21470.2 38.947 190 108 2 486 675 4 185 1.38e-31 133
Msa0813500 AT5G19180.2 31.401 207 114 7 485 674 36 231 7.58e-22 99.8
Msa0813500 AT5G19180.1 31.579 209 115 7 483 674 34 231 8.18e-22 100
Msa0813500 AT5G50580.1 34.177 158 96 3 79 229 13 169 8.61e-14 74.3
Msa0813500 AT5G50680.2 34.177 158 96 3 79 229 13 169 8.61e-14 74.3
Msa0813500 AT5G50580.2 34.177 158 96 3 79 229 13 169 8.72e-14 74.3
Msa0813500 AT5G50680.1 34.177 158 96 3 79 229 13 169 8.72e-14 74.3
Msa0813500 AT4G24940.1 31.875 160 97 3 79 229 13 169 7.22e-13 71.6
Msa0813500 AT5G55130.1 32.075 159 89 5 476 628 71 216 1.01e-12 72.4

Find 268 sgRNAs with CRISPR-Local

Find 586 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTTCATCCACTGTTTC+AGG 0.114709 5_3:-44369796 Msa0813500:intron
CAGATTCAAGAAGTGGTTTC+TGG 0.150804 5_3:+44368578 None:intergenic
TAAGTTACCATTAATATTAT+TGG 0.177026 5_3:+44369953 None:intergenic
TTTAAAGAATCTTGCCTTAA+TGG 0.185243 5_3:-44368902 Msa0813500:CDS
GCATCGTAACGACTATTTAT+TGG 0.188335 5_3:+44369015 None:intergenic
TCTATCGCCAATAATATTAA+TGG 0.201499 5_3:-44369960 Msa0813500:CDS
GCGAGTAGTGTTCTTGTTTC+CGG 0.221823 5_3:-44374892 Msa0813500:CDS
CTTGATTGGCTGAAGGAAAA+AGG 0.223345 5_3:-44367106 Msa0813500:CDS
CAGAAACCACTTCTTGAATC+TGG 0.245740 5_3:-44368577 Msa0813500:CDS
TGATGAGAGACTTGAGTTTC+AGG 0.248535 5_3:-44370336 Msa0813500:CDS
AACTGTGTAAAGAGTGTAAT+AGG 0.260159 5_3:+44375484 None:intergenic
ATAACTTCTGCCAACTTCAT+AGG 0.262377 5_3:+44367880 None:intergenic
TTTATTAAAACTGAAGTTAG+AGG 0.276986 5_3:-44370488 Msa0813500:CDS
CCTTCACTAAGTCTCTTTCT+TGG 0.277621 5_3:+44375174 None:intergenic
ATGTGTTTCATGATACCTTT+TGG 0.278407 5_3:-44368678 Msa0813500:CDS
GCCTTCAGCTTGTCAACTTC+AGG 0.281009 5_3:+44367388 None:intergenic
GAAATTAGAAAGTTGTTCTT+TGG 0.281989 5_3:+44372980 None:intergenic
TTTGATTGCGGCGTCGAGTA+TGG 0.282748 5_3:-44375007 Msa0813500:CDS
CTCTTCCGCGATTGGAATAT+TGG 0.291437 5_3:-44368799 Msa0813500:CDS
TGCTCAGGCAAGGGATAATT+TGG 0.292967 5_3:-44368305 Msa0813500:CDS
AGAACAACTTTCTAATTTCC+AGG 0.293474 5_3:-44372976 Msa0813500:intron
CAAATCTGCCACCAGGATTC+AGG 0.294269 5_3:-44367714 Msa0813500:CDS
AACTATGGTGCCTATGAAAA+AGG 0.294704 5_3:-44370197 Msa0813500:CDS
AACAGCTCAACGGAAATAAA+TGG 0.294987 5_3:+44366880 None:intergenic
CACATCGGTGCTTGTTTCTC+AGG 0.295496 5_3:+44368478 None:intergenic
GTTGTATTCTCTGAAGTTCA+TGG 0.298429 5_3:-44370302 Msa0813500:CDS
AAGATTTGAGTTGGACTGTT+TGG 0.301288 5_3:-44367171 Msa0813500:CDS
TTAAAGAATCTTGCCTTAAT+GGG 0.306714 5_3:-44368901 Msa0813500:CDS
CGAGTAGTGTTCTTGTTTCC+GGG 0.310389 5_3:-44374891 Msa0813500:CDS
TGATGCTTGATGACCTTTGC+CGG 0.329314 5_3:+44367193 None:intergenic
GGCCACTGGCCTTGTCTGTC+TGG 0.330511 5_3:-44367314 Msa0813500:CDS
TTCCATGGCCGAGCCAGTTC+CGG 0.332413 5_3:-44367212 Msa0813500:CDS
CTGTTGCTGTTGTTGTTAAT+CGG 0.333462 5_3:+44375132 None:intergenic
TCATTGAGTGCTTCCCTTAG+AGG 0.339380 5_3:+44370128 None:intergenic
TTGGTATCCCTACCCCTGAC+TGG 0.344953 5_3:-44367912 Msa0813500:CDS
TTCTGAAAACACAAAGTTGC+TGG 0.346221 5_3:+44373097 None:intergenic
AGATTTGAGTTGGACTGTTT+GGG 0.350155 5_3:-44367170 Msa0813500:CDS
TCCTTATTCGTAGTGCCTTC+AGG 0.352622 5_3:-44366794 Msa0813500:three_prime_UTR
TAATAGGGTTTGGTTTGATT+TGG 0.353051 5_3:+44375500 None:intergenic
AACCCTATGGCTGCCATGTT+TGG 0.355017 5_3:-44369858 Msa0813500:CDS
GCCTGAAGGCACTACGAATA+AGG 0.356272 5_3:+44366793 None:intergenic
GCAAAGAATCTTATTCTTGC+TGG 0.359597 5_3:-44373173 Msa0813500:CDS
CTGAAGGCCAAGTTTATTGC+TGG 0.364675 5_3:-44367373 Msa0813500:CDS
CTCTCAGGGAGCTTCTTGAT+TGG 0.364777 5_3:-44367120 Msa0813500:CDS
TTGATGACCTTTGCCGGAAC+TGG 0.366564 5_3:+44367199 None:intergenic
GCGGCGTCGAGTATGGCTTT+TGG 0.370489 5_3:-44375000 Msa0813500:CDS
AAAGTGTTTGTTGTTGGATC+TGG 0.376561 5_3:-44368943 Msa0813500:CDS
CTTCTACAGCAATTTGCCTT+TGG 0.378864 5_3:-44369897 Msa0813500:CDS
TCCTTCTTTGGCTGAAAGTC+AGG 0.379261 5_3:+44367841 None:intergenic
TCTACTGCATCTAGCATTCC+AGG 0.380310 5_3:-44370057 Msa0813500:CDS
GTCTCTTTCTTGGAAGCATA+TGG 0.384649 5_3:+44375184 None:intergenic
CTTCTTGAATCTGGAACTCT+TGG 0.385963 5_3:-44368568 Msa0813500:CDS
TGTTGTTGGATCTGGTGCAC+TGG 0.390073 5_3:-44368935 Msa0813500:CDS
GTTTCCGGGATGCGAGGACT+TGG 0.393100 5_3:-44374877 Msa0813500:CDS
AAATATGCATTTACTTCAGC+TGG 0.393678 5_3:+44368373 None:intergenic
GATAAGTTCATTTCTGAGAT+AGG 0.395303 5_3:-44370029 Msa0813500:CDS
TCCACAAGAAACTCCCATTA+AGG 0.397211 5_3:+44368888 None:intergenic
AGCAGGCAGCTTGCTGTGTA+TGG 0.400305 5_3:-44374940 Msa0813500:CDS
CGTTTCGGTGCAGACCAAAA+TGG 0.400852 5_3:+44368021 None:intergenic
GTAAAGAGTGTAATAGGGTT+TGG 0.404911 5_3:+44375490 None:intergenic
GAAGAAGACACCACAAACTA+TGG 0.406363 5_3:-44370212 Msa0813500:CDS
TTCATAGGCACCATAGTTTG+TGG 0.407816 5_3:+44370202 None:intergenic
TAGAGGCTGCCATCAGAAAC+TGG 0.408365 5_3:+44367953 None:intergenic
GAAGTGGTTTCTGGAAATAT+AGG 0.411709 5_3:+44368587 None:intergenic
CTAAGTTGGCAAAGGTGTTT+CGG 0.417033 5_3:+44367248 None:intergenic
GGCAAATTGCTGTAGAAGCT+TGG 0.417666 5_3:+44369902 None:intergenic
TACCATATGGATGTGATAGC+TGG 0.417808 5_3:-44367445 Msa0813500:CDS
ATGAAGGAACTGTAGAGTTA+TGG 0.418425 5_3:-44373127 Msa0813500:CDS
GTTCAAAACCTGTGGTTGTT+TGG 0.421129 5_3:+44370157 None:intergenic
ACATTGACCACTGCTTGACT+TGG 0.423197 5_3:-44368432 Msa0813500:CDS
GCAGTTGAGGTTGCAATCGC+TGG 0.425831 5_3:+44367340 None:intergenic
TGAAGGAACTGTAGAGTTAT+GGG 0.427570 5_3:-44373126 Msa0813500:CDS
GATGCTAAAGTGTTTGTTGT+TGG 0.431020 5_3:-44368949 Msa0813500:CDS
CTAGTACTGGAGCTCCATTT+TGG 0.431384 5_3:-44368035 Msa0813500:CDS
ATACTACGCGCAGAAACATT+TGG 0.432473 5_3:-44367931 Msa0813500:CDS
TTAGGTGGGGAATGACCATC+TGG 0.432952 5_3:+44368530 None:intergenic
GTATGAAGGGATTTCCATCT+TGG 0.433617 5_3:+44366973 None:intergenic
GGCAGTTCCTCTTCCGCGAT+TGG 0.433711 5_3:-44368807 Msa0813500:CDS
GCAAATTGCTGTAGAAGCTT+GGG 0.434219 5_3:+44369903 None:intergenic
TTGGGCTCGATCAGAGTTTG+AGG 0.434776 5_3:-44368413 Msa0813500:CDS
TGTTGTGGCTTGTGAGGATA+AGG 0.436990 5_3:-44366933 Msa0813500:CDS
AATAATATTAATGGTAACTT+AGG 0.438549 5_3:-44369951 Msa0813500:CDS
AGCAATTTGCCTTTGGTGCT+AGG 0.439721 5_3:-44369890 Msa0813500:CDS
ACTCTTGTCACTCTCGTTCA+CGG 0.440613 5_3:+44375068 None:intergenic
CAGCAACTGTGGACTTCGCC+TGG 0.443178 5_3:+44368776 None:intergenic
CTGGCTCGGCCATGGAAAAG+AGG 0.444603 5_3:+44367218 None:intergenic
TGCCGGAACTGGCTCGGCCA+TGG 0.448103 5_3:+44367210 None:intergenic
GCCTTAATGGGAGTTTCTTG+TGG 0.450723 5_3:-44368889 Msa0813500:CDS
GATGGAGAGGAACCACATAC+TGG 0.451260 5_3:-44370410 Msa0813500:CDS
TAAAAGACAATCCTACTCTC+AGG 0.451668 5_3:-44367135 Msa0813500:CDS
GGAGCGCGTTCTTGAATGCT+TGG 0.453147 5_3:-44368284 Msa0813500:CDS
CCGCGATTGGAATATTGGCC+AGG 0.453559 5_3:-44368794 Msa0813500:CDS
TCTTCCTCTGAACCAGCGAC+AGG 0.456232 5_3:+44369999 None:intergenic
TTAACCAATGTTTCTTGAGA+TGG 0.458620 5_3:-44366713 Msa0813500:three_prime_UTR
GCATCTAGCATTCCAGGCTC+TGG 0.463774 5_3:-44370051 Msa0813500:CDS
CGAGGACTTGGTGCTGAGAT+TGG 0.465948 5_3:-44374865 Msa0813500:intron
GCCATGTTTGGTGGAATTGT+AGG 0.467732 5_3:-44369846 Msa0813500:CDS
GTTGTTGGATCTGGTGCACT+GGG 0.469083 5_3:-44368934 Msa0813500:CDS
TCCATCCGCTCTTTGTGCCT+AGG 0.470744 5_3:+44367028 None:intergenic
ATAGGCCGCTTCCCTGTCGC+TGG 0.470769 5_3:-44370011 Msa0813500:CDS
CGACGCCGCAATCAAATTCC+CGG 0.471003 5_3:+44375014 None:intergenic
GCAATTTGCCTTTGGTGCTA+GGG 0.471795 5_3:-44369889 Msa0813500:CDS
AAAGAGGGGCAGTGCTAAGT+TGG 0.472731 5_3:+44367234 None:intergenic
GAAACATGCTATTGAAAAGC+AGG 0.474711 5_3:+44367050 None:intergenic
GGAAATAAATGGATACTTGA+GGG 0.475547 5_3:+44366891 None:intergenic
GAGGAGAACTGCAGTGGACG+AGG 0.475825 5_3:+44367994 None:intergenic
TATACCTTCTCAAACTGGAT+TGG 0.476277 5_3:+44367685 None:intergenic
TAACTTCTGCCAACTTCATA+GGG 0.476308 5_3:+44367881 None:intergenic
GAGGATGCTGCAACTAGTAC+TGG 0.479266 5_3:-44368048 Msa0813500:CDS
GGCTTCTGTCAGTAAGCTGC+AGG 0.481238 5_3:-44373048 Msa0813500:CDS
TTGATGAGGATCTGCATAGC+AGG 0.483115 5_3:-44374957 Msa0813500:CDS
TTTGAACTTCAAACCTCTAA+GGG 0.484104 5_3:-44370141 Msa0813500:CDS
TCTGTAACCTTGCACGATGA+AGG 0.484573 5_3:-44373143 Msa0813500:CDS
ATTGGCTTCATCCTGAATCC+TGG 0.486817 5_3:+44367703 None:intergenic
TGGCTCGGCCATGGAAAAGA+GGG 0.487985 5_3:+44367219 None:intergenic
ATCAGAAACTGGAGATGACT+TGG 0.488848 5_3:+44367964 None:intergenic
ATTAGTATATTCACTTGGGT+TGG 0.489419 5_3:+44368348 None:intergenic
CGACTTAGGTTCAGTTAAGA+AGG 0.489527 5_3:-44375109 Msa0813500:CDS
TAACTTAGGTGATGGAAGGT+TGG 0.489560 5_3:-44369937 Msa0813500:CDS
CACAGAGGCAGTAGAGAGAC+TGG 0.489594 5_3:+44367789 None:intergenic
AGTGGACGAGGGAATCGTTT+CGG 0.490364 5_3:+44368006 None:intergenic
TCAAGCATCAAGATTTGAGT+TGG 0.490518 5_3:-44367180 Msa0813500:CDS
GGAGTTTCTTGTGGAGGTCA+AGG 0.491274 5_3:-44368880 Msa0813500:CDS
CCCCACCTAACAGAAAACTA+TGG 0.494247 5_3:-44368517 Msa0813500:CDS
AGCAAGGGATATTGCCAAGA+TGG 0.494470 5_3:-44366987 Msa0813500:CDS
AAATGAACTTATCCAGAGCC+TGG 0.494765 5_3:+44370039 None:intergenic
TGATGATACAAATTACCATA+TGG 0.495122 5_3:-44367458 Msa0813500:CDS
CAATATTCCAATCGCGGAAG+AGG 0.497085 5_3:+44368800 None:intergenic
TAGAGAAGAGTAACTTAAGC+AGG 0.497531 5_3:-44368828 Msa0813500:CDS
TGGGCTCGATCAGAGTTTGA+GGG 0.498287 5_3:-44368412 Msa0813500:CDS
CCACCAAACATGGCAGCCAT+AGG 0.502484 5_3:+44369855 None:intergenic
TGTTTCTGCGCGTAGTATAG+AGG 0.504143 5_3:+44367936 None:intergenic
CTTCCCTGTCGCTGGTTCAG+AGG 0.504803 5_3:-44370003 Msa0813500:CDS
GTACTAGTTGCAGCATCCTC+AGG 0.507340 5_3:+44368051 None:intergenic
GAAGAATGCTGGTGATGCTC+AGG 0.507521 5_3:-44368320 Msa0813500:CDS
AGAGTTCCAGATTCAAGAAG+TGG 0.510671 5_3:+44368571 None:intergenic
ACCTCAACTGCTATGGCCAC+TGG 0.513534 5_3:-44367328 Msa0813500:CDS
ACATCGGTGCTTGTTTCTCA+GGG 0.514906 5_3:+44368479 None:intergenic
ATTAATGGTAACTTAGGTGA+TGG 0.515018 5_3:-44369945 Msa0813500:CDS
AATCTGGAAACGTACCGATA+AGG 0.515168 5_3:+44375391 None:intergenic
CCTATGGCTGCCATGTTTGG+TGG 0.517240 5_3:-44369855 Msa0813500:CDS
TTTAAATCATTAGGATGCAA+TGG 0.518509 5_3:+44369039 None:intergenic
AACAACAGCAACAGCGACTT+AGG 0.521780 5_3:-44375123 Msa0813500:CDS
AAGATTGTATTACTTGGGCC+AGG 0.522160 5_3:-44368237 Msa0813500:CDS
TCGCTAAGAAGAAATTCGCC+TGG 0.524799 5_3:+44370104 None:intergenic
GACCTTTGCCGGAACTGGCT+CGG 0.525206 5_3:+44367204 None:intergenic
CATTGACCACTGCTTGACTT+GGG 0.525222 5_3:-44368431 Msa0813500:CDS
GTTGGACTGTTTGGGACAGA+TGG 0.525287 5_3:-44367162 Msa0813500:CDS
TCTATGTGACGACGGTATGA+AGG 0.525866 5_3:+44366959 None:intergenic
TTTACTGTTGTTGATGTCGA+TGG 0.525947 5_3:-44370428 Msa0813500:CDS
AGCAGGGTTGTCATTGCTGA+TGG 0.527621 5_3:+44370376 None:intergenic
GGCGATAACAATAACAGTAC+CGG 0.527820 5_3:-44375033 Msa0813500:CDS
ACTGTGTAAAGAGTGTAATA+GGG 0.527862 5_3:+44375485 None:intergenic
AGGGAAGCACTCAATGATCC+AGG 0.528850 5_3:-44370122 Msa0813500:CDS
TACAGTTCCTTCATCGTGCA+AGG 0.528940 5_3:+44373136 None:intergenic
TGGTATCCCTACCCCTGACT+GGG 0.529089 5_3:-44367911 Msa0813500:CDS
TTTACAAAGCTTTGGATGGA+GGG 0.529528 5_3:-44367288 Msa0813500:CDS
GGCCGAGCCAGTTCCGGCAA+AGG 0.532237 5_3:-44367206 Msa0813500:CDS
GAGGTTGTCAAAGCATGCTC+TGG 0.532959 5_3:-44369819 Msa0813500:CDS
GACGCAATTATTCCAGTATG+TGG 0.534184 5_3:+44370398 None:intergenic
GCCCAGCTATCACATCCATA+TGG 0.534592 5_3:+44367443 None:intergenic
CGGAAATAAATGGATACTTG+AGG 0.538825 5_3:+44366890 None:intergenic
CAGTCTCTCTACTGCCTCTG+TGG 0.539128 5_3:-44367788 Msa0813500:CDS
GGCAGCTTGCTGTGTATGGT+AGG 0.539353 5_3:-44374936 Msa0813500:CDS
GCCAGTGGCCATAGCAGTTG+AGG 0.541357 5_3:+44367327 None:intergenic
ACCTGACTTTCAGCCAAAGA+AGG 0.541490 5_3:-44367842 Msa0813500:CDS
ACCATATGGATGTGATAGCT+GGG 0.544118 5_3:-44367444 Msa0813500:CDS
TGAAGGCCAAGTTTATTGCT+GGG 0.544977 5_3:-44367372 Msa0813500:CDS
ACCGATAAGGAAGAAAAGAA+TGG 0.545196 5_3:+44375404 None:intergenic
AGCACCAAGTCCTCGCATCC+CGG 0.545712 5_3:+44374873 None:intergenic
TTCACCATCTCAAGAAACAT+TGG 0.546066 5_3:+44366709 None:intergenic
CTGAACCAGCGACAGGGAAG+CGG 0.548168 5_3:+44370006 None:intergenic
ATTCGTAGTGCCTTCAGGCA+CGG 0.549689 5_3:-44366789 Msa0813500:three_prime_UTR
CGTTCTTGAATGCTTGGACA+AGG 0.549794 5_3:-44368278 Msa0813500:CDS
TTAATGGGAGTTTCTTGTGG+AGG 0.551450 5_3:-44368886 Msa0813500:CDS
TAGCATTAGTATATTCACTT+GGG 0.551858 5_3:+44368344 None:intergenic
AGCTTTCTCAAGACTGACTT+CGG 0.552709 5_3:+44370556 None:intergenic
GATCCGCCCAGCAATAAACT+TGG 0.553499 5_3:+44367366 None:intergenic
AATGCTTATAGTATTTCTTG+TGG 0.555880 5_3:-44367079 Msa0813500:CDS
TTAGGATGCAATGGTTCTGT+AGG 0.556914 5_3:+44369048 None:intergenic
TCCTACAATTCCACCAAACA+TGG 0.558580 5_3:+44369845 None:intergenic
ATAGCATTAGTATATTCACT+TGG 0.558848 5_3:+44368343 None:intergenic
CACCAAACATGGCAGCCATA+GGG 0.558852 5_3:+44369856 None:intergenic
AGCAGCTGTTGCAGCAACTG+TGG 0.560281 5_3:+44368765 None:intergenic
GATTGCAACCTCAACTGCTA+TGG 0.560816 5_3:-44367335 Msa0813500:CDS
GACAAGAGTTTCAGTAGCAG+CGG 0.564489 5_3:-44375054 Msa0813500:CDS
GGAGCTTCTTGATTGGCTGA+AGG 0.564907 5_3:-44367113 Msa0813500:CDS
ATGCTGGTGATGCTCAGGCA+AGG 0.566372 5_3:-44368315 Msa0813500:CDS
CACACAGGCCAAACAACCAC+AGG 0.568307 5_3:-44370165 Msa0813500:CDS
CAATACTGCCCTAGCACCAA+AGG 0.568311 5_3:+44369881 None:intergenic
ATGGTAACTTAGGTGATGGA+AGG 0.570275 5_3:-44369941 Msa0813500:CDS
TCAACACAAGAAACTAGAGC+AGG 0.571288 5_3:+44370359 None:intergenic
ATATCAAATACCTGAAACAG+TGG 0.571836 5_3:+44369786 None:intergenic
ATGTTTGTCGCCGTGCCTGA+AGG 0.572186 5_3:+44366779 None:intergenic
TGCTGGTGATGCTCAGGCAA+GGG 0.576855 5_3:-44368314 Msa0813500:CDS
CTGGAGATGACTTGGATCAG+AGG 0.578510 5_3:+44367972 None:intergenic
GAGTTTCTTGTGGAGGTCAA+GGG 0.579278 5_3:-44368879 Msa0813500:CDS
ACTAATGCTATGAAGAATGC+TGG 0.581995 5_3:-44368331 Msa0813500:CDS
CTATGTGACGACGGTATGAA+GGG 0.583308 5_3:+44366960 None:intergenic
AGAAAAGAATGGAATCTGAT+CGG 0.584405 5_3:+44375415 None:intergenic
CAAGCAAACATACTTAAGCC+TGG 0.586501 5_3:+44368219 None:intergenic
AAAAGACAATCCTACTCTCA+GGG 0.588461 5_3:-44367134 Msa0813500:CDS
ATCGGTGCTTGTTTCTCAGG+GGG 0.588590 5_3:+44368481 None:intergenic
GTTCTTGTTTCCGGGATGCG+AGG 0.588608 5_3:-44374883 Msa0813500:CDS
AAGTCATCTCCAGTTTCTGA+TGG 0.589571 5_3:-44367962 Msa0813500:CDS
TCCTAGGCACAAAGAGCGGA+TGG 0.590716 5_3:-44367029 Msa0813500:CDS
AAAAGTTGTAGATTTAGCAA+GGG 0.591947 5_3:-44367002 Msa0813500:CDS
GAGAGACTTGAGTTTCAGGA+TGG 0.593512 5_3:-44370332 Msa0813500:CDS
TGGTGGAATTGTAGGACAAG+AGG 0.596531 5_3:-44369838 Msa0813500:CDS
GCAGCTTGCTGTGTATGGTA+GGG 0.598555 5_3:-44374935 Msa0813500:CDS
TCGTCACATAGATGTTGTTG+TGG 0.599771 5_3:-44366948 Msa0813500:CDS
TTGTCAAGTTAGAGAGATTG+CGG 0.600901 5_3:-44367738 Msa0813500:CDS
AGCTAAATGCAATACCCAGA+TGG 0.602057 5_3:-44368545 Msa0813500:CDS
ATGCTAGATGCAGTAGAGGT+GGG 0.606083 5_3:+44370063 None:intergenic
TCAAGAAGCTCCCTGAGAGT+AGG 0.607687 5_3:+44367124 None:intergenic
AATGCTAGATGCAGTAGAGG+TGG 0.608189 5_3:+44370062 None:intergenic
TAGGGCAGTATTGAACCCTA+TGG 0.608225 5_3:-44369871 Msa0813500:CDS
TGTATGGTAGGGAGACTATG+AGG 0.608486 5_3:-44374924 Msa0813500:CDS
CCAAGAAAGAGACTTAGTGA+AGG 0.609360 5_3:-44375174 Msa0813500:CDS
GGTTTGAAGTTCAAAACCTG+TGG 0.610538 5_3:+44370149 None:intergenic
TTGCGGTCAAATCTGCCACC+AGG 0.610874 5_3:-44367721 Msa0813500:CDS
TCCTGAAGTTGACAAGCTGA+AGG 0.613866 5_3:-44367389 Msa0813500:CDS
GGTATGAAAGAGTTGAATGA+CGG 0.614542 5_3:-44370281 Msa0813500:CDS
TGGAATGCTAGATGCAGTAG+AGG 0.618576 5_3:+44370059 None:intergenic
CTTCCTCTGAACCAGCGACA+GGG 0.621319 5_3:+44370000 None:intergenic
AAAGCAAATATGAACTGAGA+CGG 0.623275 5_3:+44366750 None:intergenic
GGCTTCATCCTGAATCCTGG+TGG 0.624334 5_3:+44367706 None:intergenic
GGGCAGTGCTAAGTTGGCAA+AGG 0.624434 5_3:+44367240 None:intergenic
GTAATTGCGTGCTCTCATGT+TGG 0.625010 5_3:+44367417 None:intergenic
TCAGAGGAGGAGAACTGCAG+TGG 0.627364 5_3:+44367988 None:intergenic
AGGAGAACTGCAGTGGACGA+GGG 0.632625 5_3:+44367995 None:intergenic
GCGATAACAATAACAGTACC+GGG 0.633248 5_3:-44375032 Msa0813500:CDS
AGATGTTGTTGTGGCTTGTG+AGG 0.633396 5_3:-44366939 Msa0813500:CDS
GGATGGAGGGCACAAACTCG+AGG 0.634174 5_3:-44367275 Msa0813500:CDS
TAGGTTCAGTTAAGAAGGTG+CGG 0.635807 5_3:-44375104 Msa0813500:CDS
ATCGAGCCCAAGTCAAGCAG+TGG 0.639227 5_3:+44368425 None:intergenic
GAAGCCAATCCAGTTTGAGA+AGG 0.640400 5_3:-44367689 Msa0813500:intron
AAAAGGTGGTATTGTCACAC+AGG 0.640867 5_3:-44370180 Msa0813500:CDS
TATAAGCTAACTGCTTCACT+CGG 0.644091 5_3:+44368079 None:intergenic
CAGTACCGGGAATTTGATTG+CGG 0.646358 5_3:-44375019 Msa0813500:CDS
CATCGGTGCTTGTTTCTCAG+GGG 0.650793 5_3:+44368480 None:intergenic
TTTCAGTTTCAGAGCTAACA+CGG 0.652120 5_3:+44368701 None:intergenic
ATTGTATGAAAACAGCTCAA+CGG 0.653359 5_3:+44366870 None:intergenic
GGCTCGGCCATGGAAAAGAG+GGG 0.654337 5_3:+44367220 None:intergenic
AGGCCCAAAATCACAAAACA+CGG 0.655204 5_3:+44370454 None:intergenic
GAGATGACTTGGATCAGAGG+AGG 0.659455 5_3:+44367975 None:intergenic
TCAGTTAAGAAGGTGCGGAA+CGG 0.660213 5_3:-44375099 Msa0813500:CDS
AATTAGATCATCAATAACAA+CGG 0.661611 5_3:+44367759 None:intergenic
CAACAACATCTATGTGACGA+CGG 0.662935 5_3:+44366951 None:intergenic
TGTGAATGCAAGACTATACG+TGG 0.663201 5_3:-44368620 Msa0813500:CDS
TGTAAAACTCCAGACAGACA+AGG 0.667725 5_3:+44367305 None:intergenic
CCTGGCCAATATTCCAATCG+CGG 0.671183 5_3:+44368794 None:intergenic
ACATCAACAACAGTAAACTC+AGG 0.672812 5_3:+44370434 None:intergenic
AAGCAGTGGTCAATGTTGTG+TGG 0.675358 5_3:+44368439 None:intergenic
CAACACAAGAAACTAGAGCA+GGG 0.678685 5_3:+44370360 None:intergenic
TGTTTCCTAGGCACAAAGAG+CGG 0.681256 5_3:-44367033 Msa0813500:CDS
TAACTCGCAGGAGATTGATG+AGG 0.683174 5_3:-44374971 Msa0813500:CDS
TAGGTGGGGAATGACCATCT+GGG 0.685278 5_3:+44368531 None:intergenic
CTCCAGACAGACAAGGCCAG+TGG 0.687437 5_3:+44367312 None:intergenic
TGTTGTTGATGTCGATGGAG+AGG 0.689967 5_3:-44370423 Msa0813500:CDS
CTTGGACAAGGAGAAGTGCG+AGG 0.698953 5_3:-44368266 Msa0813500:CDS
AGGCCAAGTTTATTGCTGGG+CGG 0.703125 5_3:-44367369 Msa0813500:CDS
CTAGATGCAGTAGAGGTGGG+CGG 0.709363 5_3:+44370066 None:intergenic
AATGAATGAACAGTACACAT+CGG 0.735870 5_3:+44368463 None:intergenic
ATGGTAGGGAGACTATGAGG+AGG 0.751101 5_3:-44374921 Msa0813500:CDS
CAATTGGAGGCTGATGACTG+TGG 0.779791 5_3:+44370513 None:intergenic
GAACTTCAGAGAATACAACA+AGG 0.787948 5_3:+44370306 None:intergenic
AACAACGGCATCATCCACAG+AGG 0.791026 5_3:+44367774 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATGATTTTAAATTGAAT+GGG + chr5_3:44368880-44368899 None:intergenic 10.0%
!!! ATTAATGATTTTAAATTGAA+TGG + chr5_3:44368881-44368900 None:intergenic 10.0%
!!! ATTATTAACTTTCTTTTTTT+AGG - chr5_3:44370319-44370338 Msa0813500:CDS 10.0%
!!! GTTTTTTTTGATATTATTGA+TGG - chr5_3:44366958-44366977 Msa0813500:CDS 15.0%
!!! TTTTCCTAATTAAAATAACA+AGG - chr5_3:44367587-44367606 Msa0813500:intron 15.0%
!! TTTCCTAATTAAAATAACAA+GGG - chr5_3:44367588-44367607 Msa0813500:intron 15.0%
!! AACACATTTATTAGTAAAAA+AGG + chr5_3:44367754-44367773 None:intergenic 15.0%
!!! TTTTTTTCAATTAAATTAGC+AGG - chr5_3:44367936-44367955 Msa0813500:CDS 15.0%
!!! TTTTTTCAATTAAATTAGCA+GGG - chr5_3:44367937-44367956 Msa0813500:CDS 15.0%
!!! TATTTGAAATTATTGAATGA+AGG - chr5_3:44370076-44370095 Msa0813500:CDS 15.0%
!! TGTTTACATTATTAAAATCA+TGG - chr5_3:44370182-44370201 Msa0813500:CDS 15.0%
!! TATAACTAATCATAATAAGA+TGG - chr5_3:44370209-44370228 Msa0813500:CDS 15.0%
!! ATAACTAATCATAATAAGAT+GGG - chr5_3:44370210-44370229 Msa0813500:CDS 15.0%
!! ATTCAATGATTAGTAATAAT+AGG + chr5_3:44370712-44370731 None:intergenic 15.0%
!! ATTATTACTAATCATTGAAT+TGG - chr5_3:44370712-44370731 Msa0813500:intron 15.0%
!! TAAAGAAAAATAATTGGTAA+TGG + chr5_3:44370778-44370797 None:intergenic 15.0%
!! AGCAATTAAAGAAAAATAAT+TGG + chr5_3:44370784-44370803 None:intergenic 15.0%
!!! ATTATTTTTCTTTAATTGCT+CGG - chr5_3:44370784-44370803 Msa0813500:intron 15.0%
!!! TAGAGTAATATTTTAGTTAT+TGG - chr5_3:44370932-44370951 Msa0813500:intron 15.0%
!!! TTCTTCTTTTAAAAATGTTT+GGG + chr5_3:44371007-44371026 None:intergenic 15.0%
!!! ATTCTTCTTTTAAAAATGTT+TGG + chr5_3:44371008-44371027 None:intergenic 15.0%
!! AAATGTTATCTACAATATAT+TGG + chr5_3:44371072-44371091 None:intergenic 15.0%
!! AATATATGTATGTAATGTTA+AGG - chr5_3:44371259-44371278 Msa0813500:intron 15.0%
!! TAAGTTACCATTAATATTAT+TGG + chr5_3:44372252-44372271 None:intergenic 15.0%
!! AATAATATTAATGGTAACTT+AGG - chr5_3:44372251-44372270 Msa0813500:intron 15.0%
!!! TCTTTTGTATAAATAATTCT+TGG - chr5_3:44372620-44372639 Msa0813500:intron 15.0%
!!! CTTTTGTATAAATAATTCTT+GGG - chr5_3:44372621-44372640 Msa0813500:intron 15.0%
!!! TTTATTGGTTTTAAATCATT+AGG + chr5_3:44373175-44373194 None:intergenic 15.0%
!! TTATTTATATTAATTCTTGC+CGG - chr5_3:44374018-44374037 Msa0813500:intron 15.0%
!! ATACAATTACAAAAAAGAAA+GGG + chr5_3:44374591-44374610 None:intergenic 15.0%
!! AATACAATTACAAAAAAGAA+AGG + chr5_3:44374592-44374611 None:intergenic 15.0%
!!! TTTTTTGTAATTGTATTTGT+TGG - chr5_3:44374595-44374614 Msa0813500:intron 15.0%
!!! TTACCCTTGTTATTTTAATT+AGG + chr5_3:44367594-44367613 None:intergenic 20.0%
!!! TTTCTTGATTTGATAGATTT+AGG - chr5_3:44367781-44367800 Msa0813500:CDS 20.0%
!! ATAAGCTTATATGACTAAAA+TGG + chr5_3:44368080-44368099 None:intergenic 20.0%
!!! TTTTATTTGCTTTTCAAGAT+AGG - chr5_3:44368172-44368191 Msa0813500:intron 20.0%
!!! TTTATTTGCTTTTCAAGATA+GGG - chr5_3:44368173-44368192 Msa0813500:intron 20.0%
!! TGATAAACAATAGCAATTAA+AGG - chr5_3:44368205-44368224 Msa0813500:intron 20.0%
!! GATAAACAATAGCAATTAAA+GGG - chr5_3:44368206-44368225 Msa0813500:intron 20.0%
!!! CAAGTATTTATTTTAGTGTT+TGG - chr5_3:44368275-44368294 Msa0813500:CDS 20.0%
!!! TAGTGTTTGGTTTTAATATA+CGG - chr5_3:44368288-44368307 Msa0813500:CDS 20.0%
!! TAAGTATTTATGTTAGTGTT+TGG - chr5_3:44368372-44368391 Msa0813500:CDS 20.0%
!! ATAAGTAATAAGCTATTCTA+AGG + chr5_3:44368491-44368510 None:intergenic 20.0%
!! ATACACAATCACTTTATATA+TGG + chr5_3:44369307-44369326 None:intergenic 20.0%
!! ATATATAAAGTGATTGTGTA+TGG - chr5_3:44369306-44369325 Msa0813500:intron 20.0%
!!! AGTTTGTCATTTCAATATTA+AGG + chr5_3:44369362-44369381 None:intergenic 20.0%
!!! TTTTAATCATTATAATAGCC+AGG + chr5_3:44369477-44369496 None:intergenic 20.0%
!!! ATCTTATTTCATTTTCACAA+TGG + chr5_3:44369509-44369528 None:intergenic 20.0%
!! GTGAAAATGAAATAAGATTA+TGG - chr5_3:44369511-44369530 Msa0813500:intron 20.0%
!! AAAATGAAATAAGATTATGG+AGG - chr5_3:44369514-44369533 Msa0813500:intron 20.0%
!! ATATGTTATTAAAGCTTGAT+AGG - chr5_3:44369950-44369969 Msa0813500:CDS 20.0%
!! TAATAGGTGATTAATGTTTA+TGG - chr5_3:44370112-44370131 Msa0813500:CDS 20.0%
!!! ACTTTCTTTTTTTAGGAATA+TGG - chr5_3:44370326-44370345 Msa0813500:CDS 20.0%
!!! TTTAGAATTAGAATAGACAA+TGG + chr5_3:44370544-44370563 None:intergenic 20.0%
!! AAGTTTCTCTTGTAAATAAT+GGG + chr5_3:44370685-44370704 None:intergenic 20.0%
!!! AATATTTTAGTTATTGGTCT+TGG - chr5_3:44370938-44370957 Msa0813500:intron 20.0%
!!! ATATTTTAGTTATTGGTCTT+GGG - chr5_3:44370939-44370958 Msa0813500:intron 20.0%
!!! GTATGTAATGTTAAAGTTTT+TGG - chr5_3:44371156-44371175 Msa0813500:intron 20.0%
!! GTGATATTATATTAGATGTT+AGG - chr5_3:44371299-44371318 Msa0813500:intron 20.0%
!! ATATTATATTAGATGTTAGG+TGG - chr5_3:44371302-44371321 Msa0813500:intron 20.0%
!!! TTTTATTATAACTGTCTTGT+AGG - chr5_3:44371611-44371630 Msa0813500:intron 20.0%
!!! TCAGTTTTAATAAAAGCAAT+TGG + chr5_3:44371708-44371727 None:intergenic 20.0%
!! TTTATTAAAACTGAAGTTAG+AGG - chr5_3:44371714-44371733 Msa0813500:intron 20.0%
!!! CTCTTGTATTTTGAAATATT+GGG - chr5_3:44372459-44372478 Msa0813500:intron 20.0%
!! ATACAACTTATATCTGATAT+TGG - chr5_3:44372661-44372680 Msa0813500:intron 20.0%
!! ATCAAATTTCACTTATTATG+AGG + chr5_3:44372743-44372762 None:intergenic 20.0%
!! TTGATCATCATTTAAATGTT+TGG - chr5_3:44372764-44372783 Msa0813500:intron 20.0%
!! AAGATATACTTGGATTAATA+TGG - chr5_3:44372926-44372945 Msa0813500:intron 20.0%
!! ATGCAATGTATTATAATTTC+CGG + chr5_3:44373043-44373062 None:intergenic 20.0%
!!! TTTTGAAGATTGTATTACTT+GGG - chr5_3:44373960-44373979 Msa0813500:intron 20.0%
!! AATTAGATCATCAATAACAA+CGG + chr5_3:44374446-44374465 None:intergenic 20.0%
!!! ATTTTATCGATTCGATTCTT+AGG - chr5_3:44366869-44366888 Msa0813500:exon 25.0%
!!! TTTTATCGATTCGATTCTTA+GGG - chr5_3:44366870-44366889 Msa0813500:exon 25.0%
! CTGATAACATAGTTTATACT+GGG - chr5_3:44367444-44367463 Msa0813500:CDS 25.0%
!! TGCTTTAGTGTTATTGTTTA+GGG - chr5_3:44367689-44367708 Msa0813500:intron 25.0%
!!! TGATAGATTTAGGCTTTATT+TGG - chr5_3:44367791-44367810 Msa0813500:CDS 25.0%
!! CTTTATTTGGTAAGAAATAG+CGG - chr5_3:44367804-44367823 Msa0813500:CDS 25.0%
! AGCTAATTTAAGTAGCTTAT+AGG + chr5_3:44367986-44368005 None:intergenic 25.0%
! GCTTATTAGAAAACGATATA+CGG - chr5_3:44368003-44368022 Msa0813500:CDS 25.0%
! ATAATCTCATGAGAAAATGA+AGG - chr5_3:44368041-44368060 Msa0813500:CDS 25.0%
!!! TGGTTTTAATATACGGAATT+TGG - chr5_3:44368295-44368314 Msa0813500:CDS 25.0%
! ATTTATGTTAGTGTTTGGTT+TGG - chr5_3:44368377-44368396 Msa0813500:CDS 25.0%
!! AATATTTTCAACAAACGAAG+AGG - chr5_3:44368582-44368601 Msa0813500:CDS 25.0%
! AGCTTATTACAATAAGCTAT+CGG - chr5_3:44368633-44368652 Msa0813500:CDS 25.0%
!! GATTTTATTAAGGTAGCATT+CGG + chr5_3:44368739-44368758 None:intergenic 25.0%
!!! TCATTTTTGGAATTAGGATT+GGG + chr5_3:44368838-44368857 None:intergenic 25.0%
!!! ATCATTTTTGGAATTAGGAT+TGG + chr5_3:44368839-44368858 None:intergenic 25.0%
!!! CCTTTATCATTTTTGGAATT+AGG + chr5_3:44368844-44368863 None:intergenic 25.0%
! CCTAATTCCAAAAATGATAA+AGG - chr5_3:44368841-44368860 Msa0813500:CDS 25.0%
!! GTTAGTACCTTTATCATTTT+TGG + chr5_3:44368851-44368870 None:intergenic 25.0%
! AAAATGATCTTGGTAAAAAC+AGG - chr5_3:44369126-44369145 Msa0813500:intron 25.0%
! AAATGATCTTGGTAAAAACA+GGG - chr5_3:44369127-44369146 Msa0813500:intron 25.0%
! GAAATTAGAAAGTTGTTCTT+TGG + chr5_3:44369225-44369244 None:intergenic 25.0%
! ACATATGCTACACTATTTAA+TGG - chr5_3:44369432-44369451 Msa0813500:intron 25.0%
! CTAACATATTTCTCTCTATT+TGG - chr5_3:44369580-44369599 Msa0813500:intron 25.0%
!! TCTATTTGGTTTACATTTCT+GGG - chr5_3:44369594-44369613 Msa0813500:intron 25.0%
! TATCATAGATTCATAGTACA+CGG + chr5_3:44369650-44369669 None:intergenic 25.0%
! TATGAATCTATGATAAAGTG+AGG - chr5_3:44369655-44369674 Msa0813500:intron 25.0%
! CATACTATTATCTGTAAAGA+CGG - chr5_3:44369851-44369870 Msa0813500:CDS 25.0%
! ATACTATTATCTGTAAAGAC+GGG - chr5_3:44369852-44369871 Msa0813500:CDS 25.0%
! TCAAATTCCAAACTAAATAC+AGG + chr5_3:44369978-44369997 None:intergenic 25.0%
!!! TGTATTTAGTTTGGAATTTG+AGG - chr5_3:44369977-44369996 Msa0813500:CDS 25.0%
! TGTGCATTAATTATGTAGAA+TGG - chr5_3:44370037-44370056 Msa0813500:CDS 25.0%
! GTGCATTAATTATGTAGAAT+GGG - chr5_3:44370038-44370057 Msa0813500:CDS 25.0%
!! GTTTATGGAAGTCATTATTT+TGG - chr5_3:44370127-44370146 Msa0813500:CDS 25.0%
! AAGTACTAGATTAATAATGG+TGG + chr5_3:44370409-44370428 None:intergenic 25.0%
! CTCAAGTACTAGATTAATAA+TGG + chr5_3:44370412-44370431 None:intergenic 25.0%
!! GTTTACTGAAGTCATTATTT+TGG - chr5_3:44370515-44370534 Msa0813500:CDS 25.0%
! GAAGTTTCTCTTGTAAATAA+TGG + chr5_3:44370686-44370705 None:intergenic 25.0%
!!! AATTGGTAACTTTTGTTCTT+AGG - chr5_3:44370729-44370748 Msa0813500:intron 25.0%
! CTCAAGTACTAGATTAATAA+GGG + chr5_3:44370412-44370431 None:intergenic 25.0%
! TATAATTGGTAGAAATGTGA+AGG - chr5_3:44371437-44371456 Msa0813500:intron 25.0%
! ATAATTGGTAGAAATGTGAA+GGG - chr5_3:44371438-44371457 Msa0813500:intron 25.0%
! TCAAATAAGTCAGAAACAAA+TGG + chr5_3:44371577-44371596 None:intergenic 25.0%
!!! GTTTTAATAAAAGCAATTGG+AGG + chr5_3:44371705-44371724 None:intergenic 25.0%
!! CTAGCATTTTTAATCTTTCT+TGG + chr5_3:44371951-44371970 None:intergenic 25.0%
! TCTATCGCCAATAATATTAA+TGG - chr5_3:44372242-44372261 Msa0813500:intron 25.0%
! TCAAAATACAAGAGGATATA+AGG + chr5_3:44372453-44372472 None:intergenic 25.0%
! CCAATATTTCAAAATACAAG+AGG + chr5_3:44372461-44372480 None:intergenic 25.0%
!!! CCTCTTGTATTTTGAAATAT+TGG - chr5_3:44372458-44372477 Msa0813500:intron 25.0%
! TATATCTGATATTGGATCTT+TGG - chr5_3:44372669-44372688 Msa0813500:intron 25.0%
! TCATTTAAATGTTTGGATTC+TGG - chr5_3:44372771-44372790 Msa0813500:intron 25.0%
! GAAAACCATGGATATTATAA+AGG + chr5_3:44372801-44372820 None:intergenic 25.0%
! AAACAGTTCAAAGATATACT+TGG - chr5_3:44372916-44372935 Msa0813500:intron 25.0%
! TATAAAAATACCTAGTCTGT+TGG - chr5_3:44372960-44372979 Msa0813500:intron 25.0%
!!! TAACTTCTTTTTTCTTCTTG+TGG - chr5_3:44372998-44373017 Msa0813500:CDS 25.0%
! TGCAATGTATTATAATTTCC+GGG + chr5_3:44373042-44373061 None:intergenic 25.0%
! TTTAAATCATTAGGATGCAA+TGG + chr5_3:44373166-44373185 None:intergenic 25.0%
! TTTAAAGAATCTTGCCTTAA+TGG - chr5_3:44373300-44373319 Msa0813500:intron 25.0%
! TTAAAGAATCTTGCCTTAAT+GGG - chr5_3:44373301-44373320 Msa0813500:intron 25.0%
! TAGCATTAGTATATTCACTT+GGG + chr5_3:44373861-44373880 None:intergenic 25.0%
! ATAGCATTAGTATATTCACT+TGG + chr5_3:44373862-44373881 None:intergenic 25.0%
!!! CTTTTGAAGATTGTATTACT+TGG - chr5_3:44373959-44373978 Msa0813500:intron 25.0%
! AAAAATATACCTTCTCAAAC+TGG + chr5_3:44374525-44374544 None:intergenic 25.0%
!! TTGGTTTCAATAAGCAATTT+TGG - chr5_3:44374614-44374633 Msa0813500:intron 25.0%
! AATTTCTACCTAAAAATTGC+AGG - chr5_3:44374720-44374739 Msa0813500:intron 25.0%
! TGATGATACAAATTACCATA+TGG - chr5_3:44374744-44374763 Msa0813500:intron 25.0%
! AATGCTTATAGTATTTCTTG+TGG - chr5_3:44375123-44375142 Msa0813500:CDS 25.0%
! AAAAAGTTGTAGATTTAGCA+AGG - chr5_3:44375199-44375218 Msa0813500:intron 25.0%
! AAAAGTTGTAGATTTAGCAA+GGG - chr5_3:44375200-44375219 Msa0813500:intron 25.0%
!! TAATAGGGTTTGGTTTGATT+TGG + chr5_3:44366705-44366724 None:intergenic 30.0%
! ACTGTGTAAAGAGTGTAATA+GGG + chr5_3:44366720-44366739 None:intergenic 30.0%
! AACTGTGTAAAGAGTGTAAT+AGG + chr5_3:44366721-44366740 None:intergenic 30.0%
! CGTATTCTTTTTCTTTCGTT+CGG + chr5_3:44366749-44366768 None:intergenic 30.0%
AGAAAAGAATGGAATCTGAT+CGG + chr5_3:44366790-44366809 None:intergenic 30.0%
! TCCATTCTTTTCTTCCTTAT+CGG - chr5_3:44366797-44366816 Msa0813500:three_prime_UTR 30.0%
TTCTTCTTCCTATGTTTCTT+AGG - chr5_3:44366838-44366857 Msa0813500:three_prime_UTR 30.0%
TCTTCTTCCTATGTTTCTTA+GGG - chr5_3:44366839-44366858 Msa0813500:three_prime_UTR 30.0%
TGAAAAACCCTAAGAAACAT+AGG + chr5_3:44366849-44366868 None:intergenic 30.0%
!!! TTGATAGATCTAGCTTTTTG+CGG - chr5_3:44367404-44367423 Msa0813500:CDS 30.0%
GCTGATAACATAGTTTATAC+TGG - chr5_3:44367443-44367462 Msa0813500:CDS 30.0%
! GTGCTTTAGTGTTATTGTTT+AGG - chr5_3:44367688-44367707 Msa0813500:intron 30.0%
! GCTTTAGTGTTATTGTTTAG+GGG - chr5_3:44367690-44367709 Msa0813500:CDS 30.0%
GCAGTGTTTGATGAAATTAA+CGG - chr5_3:44367853-44367872 Msa0813500:CDS 30.0%
ATGACTAAAATGGACATGTT+TGG + chr5_3:44368070-44368089 None:intergenic 30.0%
TAAAAATGAATCATGCCTAG+TGG + chr5_3:44368157-44368176 None:intergenic 30.0%
!! CAATTAAAGGGCATTTGAAA+GGG - chr5_3:44368218-44368237 Msa0813500:intron 30.0%
CATTTGAAAGGGAAACTTAT+TGG - chr5_3:44368229-44368248 Msa0813500:intron 30.0%
TCTATAACCATAGAGATCTA+GGG + chr5_3:44368776-44368795 None:intergenic 30.0%
TTCTATAACCATAGAGATCT+AGG + chr5_3:44368777-44368796 None:intergenic 30.0%
TATGGTTATAGAACACTGTA+AGG - chr5_3:44368784-44368803 Msa0813500:CDS 30.0%
ATAGAACACTGTAAGGTTTA+TGG - chr5_3:44368791-44368810 Msa0813500:CDS 30.0%
ATTAGAAAAAGCTGACATGT+TGG + chr5_3:44368982-44369001 None:intergenic 30.0%
! GTGTTTTCAGAAAATGATCT+TGG - chr5_3:44369116-44369135 Msa0813500:intron 30.0%
AGAACAACTTTCTAATTTCC+AGG - chr5_3:44369226-44369245 Msa0813500:intron 30.0%
AGCATATGTTAACTATGCAA+CGG + chr5_3:44369421-44369440 None:intergenic 30.0%
! CTCTATTTGGTTTACATTTC+TGG - chr5_3:44369593-44369612 Msa0813500:intron 30.0%
TTTGCATTATGAATCTGTAC+AGG - chr5_3:44369722-44369741 Msa0813500:intron 30.0%
TTGCATTATGAATCTGTACA+GGG - chr5_3:44369723-44369742 Msa0813500:intron 30.0%
AGGAAGTCTAAATACACATT+GGG + chr5_3:44369881-44369900 None:intergenic 30.0%
AAGGAAGTCTAAATACACAT+TGG + chr5_3:44369882-44369901 None:intergenic 30.0%
ATAGGAACCTGTATTTAGTT+TGG - chr5_3:44369968-44369987 Msa0813500:CDS 30.0%
AGGCTATTCATTTGCATAAT+AGG - chr5_3:44370096-44370115 Msa0813500:CDS 30.0%
!!! TATGGAAGTCATTATTTTGG+TGG - chr5_3:44370130-44370149 Msa0813500:CDS 30.0%
ACTAATCATAATAAGATGGG+AGG - chr5_3:44370213-44370232 Msa0813500:CDS 30.0%
AAGAGAGTCATAATAAGATG+AGG - chr5_3:44370245-44370264 Msa0813500:CDS 30.0%
AGAGAGTCATAATAAGATGA+GGG - chr5_3:44370246-44370265 Msa0813500:CDS 30.0%
CACTCTGTTATTACTAATCA+TGG - chr5_3:44370295-44370314 Msa0813500:CDS 30.0%
!!! CTTTTTTTAGGAATATGGTG+AGG - chr5_3:44370331-44370350 Msa0813500:CDS 30.0%
AGCAAGTAATGAAAAGCTAT+TGG + chr5_3:44370375-44370394 None:intergenic 30.0%
!!! AAGAGTGATATTTTAGCTCT+TGG - chr5_3:44370462-44370481 Msa0813500:CDS 30.0%
!!! ATATTTTAGCTCTTGGTCTT+AGG - chr5_3:44370469-44370488 Msa0813500:CDS 30.0%
!!! TACTGAAGTCATTATTTTGG+TGG - chr5_3:44370518-44370537 Msa0813500:CDS 30.0%
! TAACTTTTGTTCTTAGGATG+TGG - chr5_3:44370735-44370754 Msa0813500:intron 30.0%
AAGTACTAGATTAATAAGGG+TGG + chr5_3:44370818-44370837 None:intergenic 30.0%
GCTCAAGTACTAGATTAATA+AGG + chr5_3:44370413-44370432 None:intergenic 30.0%
CTCAACTTTATGTCATACTT+CGG - chr5_3:44370847-44370866 Msa0813500:intron 30.0%
TCCAATCATGTTATTGTTGA+CGG + chr5_3:44371333-44371352 None:intergenic 30.0%
! AAGGACAAGTTTTACTGAAA+TGG + chr5_3:44371533-44371552 None:intergenic 30.0%
! TTTTGAACTTCAAACCTCTA+AGG - chr5_3:44372060-44372079 Msa0813500:intron 30.0%
TTTGAACTTCAAACCTCTAA+GGG - chr5_3:44372061-44372080 Msa0813500:intron 30.0%
ATTAATGGTAACTTAGGTGA+TGG - chr5_3:44372257-44372276 Msa0813500:intron 30.0%
ATATCAAATACCTGAAACAG+TGG + chr5_3:44372419-44372438 None:intergenic 30.0%
CTAACTTGGGAGAAATTTAA+TGG + chr5_3:44372522-44372541 None:intergenic 30.0%
AAGAACATGCAAAACTCAAA+TGG + chr5_3:44372549-44372568 None:intergenic 30.0%
AACCATGGATATTATAAAGG+AGG + chr5_3:44372798-44372817 None:intergenic 30.0%
!! TTGGATTAATATGGTTTGCT+TGG - chr5_3:44372935-44372954 Msa0813500:intron 30.0%
ATGATATTTACCAACAGACT+AGG + chr5_3:44372973-44372992 None:intergenic 30.0%
GCAATGTATTATAATTTCCG+GGG + chr5_3:44373041-44373060 None:intergenic 30.0%
! ATGCTCAGATTTCAGTTTTT+GGG - chr5_3:44373206-44373225 Msa0813500:intron 30.0%
! ATGTGTTTCATGATACCTTT+TGG - chr5_3:44373524-44373543 Msa0813500:intron 30.0%
! TGTGTTTCATGATACCTTTT+GGG - chr5_3:44373525-44373544 Msa0813500:intron 30.0%
AATGAATGAACAGTACACAT+CGG + chr5_3:44373742-44373761 None:intergenic 30.0%
AAATATGCATTTACTTCAGC+TGG + chr5_3:44373832-44373851 None:intergenic 30.0%
ATTAGTATATTCACTTGGGT+TGG + chr5_3:44373857-44373876 None:intergenic 30.0%
CAGGTAAAACTAATATACAC+CGG + chr5_3:44374040-44374059 None:intergenic 30.0%
!!! AAGCATGGTTTTTTATTCAC+AGG - chr5_3:44374080-44374099 Msa0813500:intron 30.0%
!!! ACTATTTTTGCATCCTTCTT+TGG + chr5_3:44374376-44374395 None:intergenic 30.0%
AAAAATAGTGACAGATGAGA+AGG - chr5_3:44374387-44374406 Msa0813500:intron 30.0%
TTGGAAGTTTGTACATGTTT+AGG - chr5_3:44374633-44374652 Msa0813500:intron 30.0%
! ATCATCATCCTGCAATTTTT+AGG + chr5_3:44374731-44374750 None:intergenic 30.0%
! TTTTCAATAGCATGTTTCCT+AGG - chr5_3:44375157-44375176 Msa0813500:CDS 30.0%
GGAAATAAATGGATACTTGA+GGG + chr5_3:44375314-44375333 None:intergenic 30.0%
ATTGTATGAAAACAGCTCAA+CGG + chr5_3:44375335-44375354 None:intergenic 30.0%
AAAGCAAATATGAACTGAGA+CGG + chr5_3:44375455-44375474 None:intergenic 30.0%
TTAACCAATGTTTCTTGAGA+TGG - chr5_3:44375489-44375508 Msa0813500:five_prime_UTR 30.0%
! GTAAAGAGTGTAATAGGGTT+TGG + chr5_3:44366715-44366734 None:intergenic 35.0%
! TCTTTTTCTTTCGTTCGGTT+TGG + chr5_3:44366744-44366763 None:intergenic 35.0%
ACCGATAAGGAAGAAAAGAA+TGG + chr5_3:44366801-44366820 None:intergenic 35.0%
TAGGAAGAAGAAGATGAATC+TGG + chr5_3:44366830-44366849 None:intergenic 35.0%
GAAATAATCTGCTGAATACG+CGG + chr5_3:44366997-44367016 None:intergenic 35.0%
! CTGTTGCTGTTGTTGTTAAT+CGG + chr5_3:44367073-44367092 None:intergenic 35.0%
!! TTTTGGAAATTCTAACTCGC+AGG - chr5_3:44367219-44367238 Msa0813500:CDS 35.0%
AGTAAGCTGATTGAATTTGC+AGG - chr5_3:44367501-44367520 Msa0813500:intron 35.0%
GTAAGCTGATTGAATTTGCA+GGG - chr5_3:44367502-44367521 Msa0813500:intron 35.0%
GCTCATAGCTTAAAGCTTAT+AGG + chr5_3:44367636-44367655 None:intergenic 35.0%
TAAGCTATGAGCTACTTCTT+CGG - chr5_3:44367644-44367663 Msa0813500:intron 35.0%
TGTTATTGTTTAGGGGATGT+TGG - chr5_3:44367697-44367716 Msa0813500:CDS 35.0%
GTTATTGTTTAGGGGATGTT+GGG - chr5_3:44367698-44367717 Msa0813500:CDS 35.0%
! TAGCGGATATCTGATAAGTT+AGG - chr5_3:44367821-44367840 Msa0813500:CDS 35.0%
TACTTTCCAAACAAACCACT+AGG - chr5_3:44368139-44368158 Msa0813500:intron 35.0%
!! GCAATTAAAGGGCATTTGAA+AGG - chr5_3:44368217-44368236 Msa0813500:intron 35.0%
! ACGTTTATCAATGGGAGTAT+GGG + chr5_3:44368432-44368451 None:intergenic 35.0%
ATCCGAAGACGTTTATCAAT+GGG + chr5_3:44368440-44368459 None:intergenic 35.0%
TATCCGAAGACGTTTATCAA+TGG + chr5_3:44368441-44368460 None:intergenic 35.0%
TTATTAGACAAGTGTTCACG+AGG - chr5_3:44368507-44368526 Msa0813500:CDS 35.0%
TTATTAAGGTAGCATTCGGA+AGG + chr5_3:44368735-44368754 None:intergenic 35.0%
! GTTGGAGAGCGATTTTATTA+AGG + chr5_3:44368749-44368768 None:intergenic 35.0%
ACTGTAAGGTTTATGGATCA+TGG - chr5_3:44368798-44368817 Msa0813500:CDS 35.0%
ACGCAGTAAATTTCAATCCA+AGG + chr5_3:44369006-44369025 None:intergenic 35.0%
GCAAAGAATCTTATTCTTGC+TGG - chr5_3:44369029-44369048 Msa0813500:CDS 35.0%
ATGAAGGAACTGTAGAGTTA+TGG - chr5_3:44369075-44369094 Msa0813500:CDS 35.0%
TGAAGGAACTGTAGAGTTAT+GGG - chr5_3:44369076-44369095 Msa0813500:CDS 35.0%
! TTCTGAAAACACAAAGTTGC+TGG + chr5_3:44369108-44369127 None:intergenic 35.0%
GTGATTGTGTATGGAATTGT+AGG - chr5_3:44369315-44369334 Msa0813500:intron 35.0%
TGCATATCAACTACAAAACC+TGG - chr5_3:44369456-44369475 Msa0813500:intron 35.0%
AGCATGTGAAGATGAAACAA+AGG + chr5_3:44369554-44369573 None:intergenic 35.0%
!!! AAGTCATTATTTTGGTGGCT+AGG - chr5_3:44370135-44370154 Msa0813500:CDS 35.0%
!!! AGTCATTATTTTGGTGGCTA+GGG - chr5_3:44370136-44370155 Msa0813500:CDS 35.0%
GAGAGTCATAATAAGATGAG+GGG - chr5_3:44370247-44370266 Msa0813500:CDS 35.0%
! ATGAGGGGCATATTATTCTA+CGG - chr5_3:44370262-44370281 Msa0813500:CDS 35.0%
AGTTATGGTAGTTGCGAATT+AGG - chr5_3:44370635-44370654 Msa0813500:intron 35.0%
TATGTATGATATGTGACGAG+TGG + chr5_3:44370911-44370930 None:intergenic 35.0%
AAAGAAGAATAGCTGCAAAC+CGG - chr5_3:44371018-44371037 Msa0813500:intron 35.0%
ACCGTCAACAATAACATGAT+TGG - chr5_3:44371329-44371348 Msa0813500:intron 35.0%
AGACGGTCTACAACAATATA+AGG + chr5_3:44371373-44371392 None:intergenic 35.0%
TATTGTGTGACTGTGATAGA+CGG + chr5_3:44371390-44371409 None:intergenic 35.0%
CAGTCACACAATAATTCTGA+TGG - chr5_3:44371397-44371416 Msa0813500:intron 35.0%
GCACTATACAACTACAAAGA+AGG + chr5_3:44371552-44371571 None:intergenic 35.0%
! ACTGAAGTTAGAGGTCTTTT+TGG - chr5_3:44371723-44371742 Msa0813500:intron 35.0%
! GTTCCGTGTTTTGTGATTTT+GGG - chr5_3:44371745-44371764 Msa0813500:intron 35.0%
ACATCAACAACAGTAAACTC+AGG + chr5_3:44371771-44371790 None:intergenic 35.0%
TTTACTGTTGTTGATGTCGA+TGG - chr5_3:44371774-44371793 Msa0813500:intron 35.0%
GAACTTCAGAGAATACAACA+AGG + chr5_3:44371899-44371918 None:intergenic 35.0%
!! GTTGTATTCTCTGAAGTTCA+TGG - chr5_3:44371900-44371919 Msa0813500:intron 35.0%
GGTATGAAAGAGTTGAATGA+CGG - chr5_3:44371921-44371940 Msa0813500:intron 35.0%
AACTATGGTGCCTATGAAAA+AGG - chr5_3:44372005-44372024 Msa0813500:intron 35.0%
!! GACAATACCACCTTTTTCAT+AGG + chr5_3:44372018-44372037 None:intergenic 35.0%
CAAATTTCATCCACTGTTTC+AGG - chr5_3:44372406-44372425 Msa0813500:intron 35.0%
ATGGCAAAATACCTCCATAA+GGG + chr5_3:44372503-44372522 None:intergenic 35.0%
AATGGCAAAATACCTCCATA+AGG + chr5_3:44372504-44372523 None:intergenic 35.0%
!! GCTTTCCAATATTTTGAGCA+AGG - chr5_3:44372698-44372717 Msa0813500:intron 35.0%
!! AATATTTTGAGCAAGGCACT+CGG - chr5_3:44372705-44372724 Msa0813500:intron 35.0%
GACCTCCTTTATAATATCCA+TGG - chr5_3:44372793-44372812 Msa0813500:intron 35.0%
TAACAGTAAGCCAAACATTG+AGG - chr5_3:44372875-44372894 Msa0813500:intron 35.0%
TATGACAATGCCTCAATGTT+TGG + chr5_3:44372888-44372907 None:intergenic 35.0%
TGTATTATAATTTCCGGGGA+GGG + chr5_3:44373037-44373056 None:intergenic 35.0%
ATGTATTATAATTTCCGGGG+AGG + chr5_3:44373038-44373057 None:intergenic 35.0%
! GTTTTTCTATTTCGACTCTG+TGG - chr5_3:44373123-44373142 Msa0813500:CDS 35.0%
GCATCGTAACGACTATTTAT+TGG + chr5_3:44373190-44373209 None:intergenic 35.0%
! GATGCTCAGATTTCAGTTTT+TGG - chr5_3:44373205-44373224 Msa0813500:intron 35.0%
!! GATGCTAAAGTGTTTGTTGT+TGG - chr5_3:44373253-44373272 Msa0813500:intron 35.0%
!! AAAGTGTTTGTTGTTGGATC+TGG - chr5_3:44373259-44373278 Msa0813500:intron 35.0%
TAGAGAAGAGTAACTTAAGC+AGG - chr5_3:44373374-44373393 Msa0813500:intron 35.0%
TTTCAGTTTCAGAGCTAACA+CGG + chr5_3:44373504-44373523 None:intergenic 35.0%
! AACACTCAAGTTTTCCCAAA+AGG + chr5_3:44373542-44373561 None:intergenic 35.0%
! GAAGTGGTTTCTGGAAATAT+AGG + chr5_3:44373618-44373637 None:intergenic 35.0%
! ACCATAGTTTTCTGTTAGGT+GGG + chr5_3:44373689-44373708 None:intergenic 35.0%
ACTAATGCTATGAAGAATGC+TGG - chr5_3:44373871-44373890 Msa0813500:intron 35.0%
AAAAAACCATGCTTGAGTGT+AGG + chr5_3:44374074-44374093 None:intergenic 35.0%
TATAAGCTAACTGCTTCACT+CGG + chr5_3:44374126-44374145 None:intergenic 35.0%
!! GTTAGCTTATACTTTTCCTG+AGG - chr5_3:44374135-44374154 Msa0813500:intron 35.0%
TAACTTCTGCCAACTTCATA+GGG + chr5_3:44374324-44374343 None:intergenic 35.0%
ATAACTTCTGCCAACTTCAT+AGG + chr5_3:44374325-44374344 None:intergenic 35.0%
TTGTCAAGTTAGAGAGATTG+CGG - chr5_3:44374464-44374483 Msa0813500:intron 35.0%
TATACCTTCTCAAACTGGAT+TGG + chr5_3:44374520-44374539 None:intergenic 35.0%
AGAATATTCACCTTGTTGCT+TGG - chr5_3:44374560-44374579 Msa0813500:intron 35.0%
TATGTATTGTGAACCCAGAT+TGG + chr5_3:44374669-44374688 None:intergenic 35.0%
!! TCTGGAGTTTTACAAAGCTT+TGG - chr5_3:44374906-44374925 Msa0813500:CDS 35.0%
!!! GAGTTTTACAAAGCTTTGGA+TGG - chr5_3:44374910-44374929 Msa0813500:CDS 35.0%
!!! TTTTACAAAGCTTTGGATGG+AGG - chr5_3:44374913-44374932 Msa0813500:CDS 35.0%
!! TTTACAAAGCTTTGGATGGA+GGG - chr5_3:44374914-44374933 Msa0813500:CDS 35.0%
TCAAGCATCAAGATTTGAGT+TGG - chr5_3:44375022-44375041 Msa0813500:CDS 35.0%
!! AAGATTTGAGTTGGACTGTT+TGG - chr5_3:44375031-44375050 Msa0813500:CDS 35.0%
!! AGATTTGAGTTGGACTGTTT+GGG - chr5_3:44375032-44375051 Msa0813500:CDS 35.0%
TAAAAGACAATCCTACTCTC+AGG - chr5_3:44375067-44375086 Msa0813500:CDS 35.0%
AAAAGACAATCCTACTCTCA+GGG - chr5_3:44375068-44375087 Msa0813500:CDS 35.0%
GAAACATGCTATTGAAAAGC+AGG + chr5_3:44375155-44375174 None:intergenic 35.0%
CGGAAATAAATGGATACTTG+AGG + chr5_3:44375315-44375334 None:intergenic 35.0%
AACAGCTCAACGGAAATAAA+TGG + chr5_3:44375325-44375344 None:intergenic 35.0%
TTCACCATCTCAAGAAACAT+TGG + chr5_3:44375496-44375515 None:intergenic 35.0%
! AATCTGGAAACGTACCGATA+AGG + chr5_3:44366814-44366833 None:intergenic 40.0%
! GTCTCTTTCTTGGAAGCATA+TGG + chr5_3:44367021-44367040 None:intergenic 40.0%
CCTTCACTAAGTCTCTTTCT+TGG + chr5_3:44367031-44367050 None:intergenic 40.0%
CCAAGAAAGAGACTTAGTGA+AGG - chr5_3:44367028-44367047 Msa0813500:CDS 40.0%
CGACTTAGGTTCAGTTAAGA+AGG - chr5_3:44367093-44367112 Msa0813500:CDS 40.0%
TAGGTTCAGTTAAGAAGGTG+CGG - chr5_3:44367098-44367117 Msa0813500:CDS 40.0%
GGCGATAACAATAACAGTAC+CGG - chr5_3:44367169-44367188 Msa0813500:CDS 40.0%
GCGATAACAATAACAGTACC+GGG - chr5_3:44367170-44367189 Msa0813500:CDS 40.0%
!! ATCATGCCTAGTGGTTTGTT+TGG + chr5_3:44368148-44368167 None:intergenic 40.0%
GACGTTTATCAATGGGAGTA+TGG + chr5_3:44368433-44368452 None:intergenic 40.0%
CTCCCATTGATAAACGTCTT+CGG - chr5_3:44368435-44368454 Msa0813500:CDS 40.0%
TCAACAAACGAAGAGGCAAT+AGG - chr5_3:44368589-44368608 Msa0813500:CDS 40.0%
CAACAAACGAAGAGGCAATA+GGG - chr5_3:44368590-44368609 Msa0813500:CDS 40.0%
ACAATAAGCTATCGGAGCTT+AGG - chr5_3:44368641-44368660 Msa0813500:CDS 40.0%
!! GTCAGCTTTTTCTAATGCCT+TGG - chr5_3:44368986-44369005 Msa0813500:CDS 40.0%
!! AGAGCAAAAGTAGAAGTACC+TGG + chr5_3:44369247-44369266 None:intergenic 40.0%
AACTATGCAACGGAAGATCT+GGG + chr5_3:44369411-44369430 None:intergenic 40.0%
TAACTATGCAACGGAAGATC+TGG + chr5_3:44369412-44369431 None:intergenic 40.0%
!! TTCCTTTGAACTCTGAGATG+AGG - chr5_3:44369896-44369915 Msa0813500:CDS 40.0%
! TGAGGGGCATATTATTCTAC+GGG - chr5_3:44370263-44370282 Msa0813500:CDS 40.0%
TTCATTACTTGCTCTGTGCT+TGG - chr5_3:44370382-44370401 Msa0813500:CDS 40.0%
TCATTACTTGCTCTGTGCTT+GGG - chr5_3:44370383-44370402 Msa0813500:CDS 40.0%
CCATAACTGTCTCATGAGTT+GGG + chr5_3:44370623-44370642 None:intergenic 40.0%
ACCATAACTGTCTCATGAGT+TGG + chr5_3:44370624-44370643 None:intergenic 40.0%
GAGTCGTGATAAAAGATGAG+AGG - chr5_3:44370659-44370678 Msa0813500:intron 40.0%
TTTGTTCTTAGGATGTGGTG+AGG - chr5_3:44370740-44370759 Msa0813500:intron 40.0%
TTGTTCTTAGGATGTGGTGA+GGG - chr5_3:44370741-44370760 Msa0813500:intron 40.0%
TCTGTAAGATATGTGACGAG+TGG + chr5_3:44370881-44370900 None:intergenic 40.0%
GTCTTGGGTCTATGATCAAT+TGG - chr5_3:44370954-44370973 Msa0813500:intron 40.0%
AAGAAGAATAGCTGCAAACC+GGG - chr5_3:44371019-44371038 Msa0813500:intron 40.0%
ATAGTCACATACATGTGACC+CGG + chr5_3:44371040-44371059 None:intergenic 40.0%
! AGCTTTCTCAAGACTGACTT+CGG + chr5_3:44371649-44371668 None:intergenic 40.0%
! GGTTCCGTGTTTTGTGATTT+TGG - chr5_3:44371744-44371763 Msa0813500:intron 40.0%
AGGCCCAAAATCACAAAACA+CGG + chr5_3:44371751-44371770 None:intergenic 40.0%
GACGCAATTATTCCAGTATG+TGG + chr5_3:44371807-44371826 None:intergenic 40.0%
CAACACAAGAAACTAGAGCA+GGG + chr5_3:44371845-44371864 None:intergenic 40.0%
TCAACACAAGAAACTAGAGC+AGG + chr5_3:44371846-44371865 None:intergenic 40.0%
TGATGAGAGACTTGAGTTTC+AGG - chr5_3:44371866-44371885 Msa0813500:intron 40.0%
GAAGAAGACACCACAAACTA+TGG - chr5_3:44371990-44372009 Msa0813500:intron 40.0%
TTCATAGGCACCATAGTTTG+TGG + chr5_3:44372003-44372022 None:intergenic 40.0%
TATGGTGCCTATGAAAAAGG+TGG - chr5_3:44372008-44372027 Msa0813500:intron 40.0%
AAAAGGTGGTATTGTCACAC+AGG - chr5_3:44372022-44372041 Msa0813500:intron 40.0%
GTTCAAAACCTGTGGTTGTT+TGG + chr5_3:44372048-44372067 None:intergenic 40.0%
! GGTTTGAAGTTCAAAACCTG+TGG + chr5_3:44372056-44372075 None:intergenic 40.0%
!! ATGGTAACTTAGGTGATGGA+AGG - chr5_3:44372261-44372280 Msa0813500:intron 40.0%
!! TAACTTAGGTGATGGAAGGT+TGG - chr5_3:44372265-44372284 Msa0813500:intron 40.0%
GCAAATTGCTGTAGAAGCTT+GGG + chr5_3:44372302-44372321 None:intergenic 40.0%
CTTCTACAGCAATTTGCCTT+TGG - chr5_3:44372305-44372324 Msa0813500:intron 40.0%
TCCTACAATTCCACCAAACA+TGG + chr5_3:44372360-44372379 None:intergenic 40.0%
ACATGCAAAACTCAAATGGC+TGG + chr5_3:44372545-44372564 None:intergenic 40.0%
GAGTGCCTTGCTCAAAATAT+TGG + chr5_3:44372706-44372725 None:intergenic 40.0%
ATGAATGCTTGGGAAAACCA+TGG + chr5_3:44372813-44372832 None:intergenic 40.0%
CATGCAATGCATGAATGCTT+GGG + chr5_3:44372823-44372842 None:intergenic 40.0%
ACATGCAATGCATGAATGCT+TGG + chr5_3:44372824-44372843 None:intergenic 40.0%
! GTTTGGCTTACTGTTAGACA+GGG + chr5_3:44372871-44372890 None:intergenic 40.0%
! TGTTTGGCTTACTGTTAGAC+AGG + chr5_3:44372872-44372891 None:intergenic 40.0%
TATTATAATTTCCGGGGAGG+GGG + chr5_3:44373035-44373054 None:intergenic 40.0%
GTATTATAATTTCCGGGGAG+GGG + chr5_3:44373036-44373055 None:intergenic 40.0%
TCCAGTCGAAGTTGTATTTG+TGG - chr5_3:44373067-44373086 Msa0813500:CDS 40.0%
ACCACAAATACAACTTCGAC+TGG + chr5_3:44373071-44373090 None:intergenic 40.0%
! TTAGGATGCAATGGTTCTGT+AGG + chr5_3:44373157-44373176 None:intergenic 40.0%
TCCACAAGAAACTCCCATTA+AGG + chr5_3:44373317-44373336 None:intergenic 40.0%
TTAATGGGAGTTTCTTGTGG+AGG - chr5_3:44373316-44373335 Msa0813500:intron 40.0%
TGTGAATGCAAGACTATACG+TGG - chr5_3:44373582-44373601 Msa0813500:intron 40.0%
CAGATTCAAGAAGTGGTTTC+TGG + chr5_3:44373627-44373646 None:intergenic 40.0%
CAGAAACCACTTCTTGAATC+TGG - chr5_3:44373625-44373644 Msa0813500:intron 40.0%
AGAGTTCCAGATTCAAGAAG+TGG + chr5_3:44373634-44373653 None:intergenic 40.0%
! CTTCTTGAATCTGGAACTCT+TGG - chr5_3:44373634-44373653 Msa0813500:intron 40.0%
AGCTAAATGCAATACCCAGA+TGG - chr5_3:44373657-44373676 Msa0813500:intron 40.0%
! CCATAGTTTTCTGTTAGGTG+GGG + chr5_3:44373688-44373707 None:intergenic 40.0%
! CACCATAGTTTTCTGTTAGG+TGG + chr5_3:44373690-44373709 None:intergenic 40.0%
! AGGCACCATAGTTTTCTGTT+AGG + chr5_3:44373693-44373712 None:intergenic 40.0%
AAGATTGTATTACTTGGGCC+AGG - chr5_3:44373965-44373984 Msa0813500:intron 40.0%
CAAGCAAACATACTTAAGCC+TGG + chr5_3:44373986-44374005 None:intergenic 40.0%
AGTGTAGGACATACAGATAC+AGG + chr5_3:44374059-44374078 None:intergenic 40.0%
ATCAGAAACTGGAGATGACT+TGG + chr5_3:44374241-44374260 None:intergenic 40.0%
AAGTCATCTCCAGTTTCTGA+TGG - chr5_3:44374240-44374259 Msa0813500:intron 40.0%
ATACTACGCGCAGAAACATT+TGG - chr5_3:44374271-44374290 Msa0813500:intron 40.0%
GGTGAAAAACCCTATGAAGT+TGG - chr5_3:44374312-44374331 Msa0813500:intron 40.0%
TAGGATAGAATCTGCCAATC+TGG - chr5_3:44374652-44374671 Msa0813500:intron 40.0%
AGGATAGAATCTGCCAATCT+GGG - chr5_3:44374653-44374672 Msa0813500:intron 40.0%
TACCATATGGATGTGATAGC+TGG - chr5_3:44374757-44374776 Msa0813500:intron 40.0%
ACCATATGGATGTGATAGCT+GGG - chr5_3:44374758-44374777 Msa0813500:intron 40.0%
TGAAGGCCAAGTTTATTGCT+GGG - chr5_3:44374830-44374849 Msa0813500:intron 40.0%
TGTAAAACTCCAGACAGACA+AGG + chr5_3:44374900-44374919 None:intergenic 40.0%
!! CTAAGTTGGCAAAGGTGTTT+CGG + chr5_3:44374957-44374976 None:intergenic 40.0%
! CTTGATTGGCTGAAGGAAAA+AGG - chr5_3:44375096-44375115 Msa0813500:CDS 40.0%
GTATGAAGGGATTTCCATCT+TGG + chr5_3:44375232-44375251 None:intergenic 40.0%
CAACAACATCTATGTGACGA+CGG + chr5_3:44375254-44375273 None:intergenic 40.0%
TCGTCACATAGATGTTGTTG+TGG - chr5_3:44375254-44375273 Msa0813500:intron 40.0%
AACAACAGCAACAGCGACTT+AGG - chr5_3:44367079-44367098 Msa0813500:CDS 45.0%
! TCAGTTAAGAAGGTGCGGAA+CGG - chr5_3:44367103-44367122 Msa0813500:CDS 45.0%
ACTCTTGTCACTCTCGTTCA+CGG + chr5_3:44367137-44367156 None:intergenic 45.0%
GACAAGAGTTTCAGTAGCAG+CGG - chr5_3:44367148-44367167 Msa0813500:CDS 45.0%
! CAGTACCGGGAATTTGATTG+CGG - chr5_3:44367183-44367202 Msa0813500:CDS 45.0%
TAACTCGCAGGAGATTGATG+AGG - chr5_3:44367231-44367250 Msa0813500:CDS 45.0%
TTGATGAGGATCTGCATAGC+AGG - chr5_3:44367245-44367264 Msa0813500:CDS 45.0%
TGTATGGTAGGGAGACTATG+AGG - chr5_3:44367278-44367297 Msa0813500:CDS 45.0%
! GCGAGTAGTGTTCTTGTTTC+CGG - chr5_3:44367310-44367329 Msa0813500:CDS 45.0%
! CGAGTAGTGTTCTTGTTTCC+GGG - chr5_3:44367311-44367330 Msa0813500:CDS 45.0%
!! TTGGGACTTGGTGTTGAGAT+TGG - chr5_3:44367716-44367735 Msa0813500:CDS 45.0%
! ATAGAGATCTAGGGTGTGGT+TGG + chr5_3:44368767-44368786 None:intergenic 45.0%
AACCACACCCTAGATCTCTA+TGG - chr5_3:44368766-44368785 Msa0813500:CDS 45.0%
! AACCATAGAGATCTAGGGTG+TGG + chr5_3:44368771-44368790 None:intergenic 45.0%
TCTGTAACCTTGCACGATGA+AGG - chr5_3:44369059-44369078 Msa0813500:CDS 45.0%
TACAGTTCCTTCATCGTGCA+AGG + chr5_3:44369069-44369088 None:intergenic 45.0%
TCTTGGTAAAAACAGGGCAG+TGG - chr5_3:44369133-44369152 Msa0813500:intron 45.0%
GCGAGCACATGACATATACT+TGG - chr5_3:44369745-44369764 Msa0813500:intron 45.0%
CACCTCATCTCAGAGTTCAA+AGG + chr5_3:44369901-44369920 None:intergenic 45.0%
!! ATTTTGGTGGCTAGGGAGTA+TGG - chr5_3:44370143-44370162 Msa0813500:CDS 45.0%
! GAGGGGCATATTATTCTACG+GGG - chr5_3:44370264-44370283 Msa0813500:CDS 45.0%
! AGGGGCATATTATTCTACGG+GGG - chr5_3:44370265-44370284 Msa0813500:CDS 45.0%
CCCAACTCATGAGACAGTTA+TGG - chr5_3:44370620-44370639 Msa0813500:intron 45.0%
TGTTGTTGATGTCGATGGAG+AGG - chr5_3:44371779-44371798 Msa0813500:intron 45.0%
GAGAGACTTGAGTTTCAGGA+TGG - chr5_3:44371870-44371889 Msa0813500:intron 45.0%
TCATTGAGTGCTTCCCTTAG+AGG + chr5_3:44372077-44372096 None:intergenic 45.0%
TCGCTAAGAAGAAATTCGCC+TGG + chr5_3:44372101-44372120 None:intergenic 45.0%
ATGCTAGATGCAGTAGAGGT+GGG + chr5_3:44372142-44372161 None:intergenic 45.0%
AATGCTAGATGCAGTAGAGG+TGG + chr5_3:44372143-44372162 None:intergenic 45.0%
TGGAATGCTAGATGCAGTAG+AGG + chr5_3:44372146-44372165 None:intergenic 45.0%
TCTACTGCATCTAGCATTCC+AGG - chr5_3:44372145-44372164 Msa0813500:intron 45.0%
GGCAAATTGCTGTAGAAGCT+TGG + chr5_3:44372303-44372322 None:intergenic 45.0%
!! AGCAATTTGCCTTTGGTGCT+AGG - chr5_3:44372312-44372331 Msa0813500:intron 45.0%
!! GCAATTTGCCTTTGGTGCTA+GGG - chr5_3:44372313-44372332 Msa0813500:intron 45.0%
! TAGGGCAGTATTGAACCCTA+TGG - chr5_3:44372331-44372350 Msa0813500:intron 45.0%
! GCCATGTTTGGTGGAATTGT+AGG - chr5_3:44372356-44372375 Msa0813500:intron 45.0%
TGGTGGAATTGTAGGACAAG+AGG - chr5_3:44372364-44372383 Msa0813500:intron 45.0%
GCAAATGACGTTAGCCCTTA+TGG - chr5_3:44372486-44372505 Msa0813500:intron 45.0%
AATGACGTTAGCCCTTATGG+AGG - chr5_3:44372489-44372508 Msa0813500:intron 45.0%
! CTCAAATGGCTGGCTAACTT+GGG + chr5_3:44372535-44372554 None:intergenic 45.0%
! ACTCAAATGGCTGGCTAACT+TGG + chr5_3:44372536-44372555 None:intergenic 45.0%
TTAGACAGGGATTGTTGTGC+AGG + chr5_3:44372858-44372877 None:intergenic 45.0%
GCCTTAATGGGAGTTTCTTG+TGG - chr5_3:44373313-44373332 Msa0813500:intron 45.0%
GAGTTTCTTGTGGAGGTCAA+GGG - chr5_3:44373323-44373342 Msa0813500:intron 45.0%
CAATATTCCAATCGCGGAAG+AGG + chr5_3:44373405-44373424 None:intergenic 45.0%
CTCTTCCGCGATTGGAATAT+TGG - chr5_3:44373403-44373422 Msa0813500:intron 45.0%
CCCCACCTAACAGAAAACTA+TGG - chr5_3:44373685-44373704 Msa0813500:intron 45.0%
! ACATCGGTGCTTGTTTCTCA+GGG + chr5_3:44373726-44373745 None:intergenic 45.0%
AAGCAGTGGTCAATGTTGTG+TGG + chr5_3:44373766-44373785 None:intergenic 45.0%
ACATTGACCACTGCTTGACT+TGG - chr5_3:44373770-44373789 Msa0813500:intron 45.0%
CATTGACCACTGCTTGACTT+GGG - chr5_3:44373771-44373790 Msa0813500:intron 45.0%
TGCTCAGGCAAGGGATAATT+TGG - chr5_3:44373897-44373916 Msa0813500:intron 45.0%
CGTTCTTGAATGCTTGGACA+AGG - chr5_3:44373924-44373943 Msa0813500:intron 45.0%
GTATGTCCTACACTCAAGCA+TGG - chr5_3:44374065-44374084 Msa0813500:intron 45.0%
!! CTAGTACTGGAGCTCCATTT+TGG - chr5_3:44374167-44374186 Msa0813500:intron 45.0%
! TGTTTCTGCGCGTAGTATAG+AGG + chr5_3:44374269-44374288 None:intergenic 45.0%
! TAGGGTTTTTCACCCAGTCA+GGG + chr5_3:44374306-44374325 None:intergenic 45.0%
! ATAGGGTTTTTCACCCAGTC+AGG + chr5_3:44374307-44374326 None:intergenic 45.0%
ACCTGACTTTCAGCCAAAGA+AGG - chr5_3:44374360-44374379 Msa0813500:intron 45.0%
TCCTTCTTTGGCTGAAAGTC+AGG + chr5_3:44374364-44374383 None:intergenic 45.0%
! ATTGGCTTCATCCTGAATCC+TGG + chr5_3:44374502-44374521 None:intergenic 45.0%
GAAGCCAATCCAGTTTGAGA+AGG - chr5_3:44374513-44374532 Msa0813500:intron 45.0%
GTAATTGCGTGCTCTCATGT+TGG + chr5_3:44374788-44374807 None:intergenic 45.0%
TCCTGAAGTTGACAAGCTGA+AGG - chr5_3:44374813-44374832 Msa0813500:intron 45.0%
CTGAAGGCCAAGTTTATTGC+TGG - chr5_3:44374829-44374848 Msa0813500:intron 45.0%
GATTGCAACCTCAACTGCTA+TGG - chr5_3:44374867-44374886 Msa0813500:CDS 45.0%
! TGATGCTTGATGACCTTTGC+CGG + chr5_3:44375012-44375031 None:intergenic 45.0%
TGTTTCCTAGGCACAAAGAG+CGG - chr5_3:44375169-44375188 Msa0813500:CDS 45.0%
AGCAAGGGATATTGCCAAGA+TGG - chr5_3:44375215-44375234 Msa0813500:intron 45.0%
CTATGTGACGACGGTATGAA+GGG + chr5_3:44375245-44375264 None:intergenic 45.0%
TCTATGTGACGACGGTATGA+AGG + chr5_3:44375246-44375265 None:intergenic 45.0%
! AGATGTTGTTGTGGCTTGTG+AGG - chr5_3:44375263-44375282 Msa0813500:intron 45.0%
! TGTTGTGGCTTGTGAGGATA+AGG - chr5_3:44375269-44375288 Msa0813500:intron 45.0%
TCCTTATTCGTAGTGCCTTC+AGG - chr5_3:44375408-44375427 Msa0813500:five_prime_UTR 45.0%
!!! ATTTATTTTATTATTTTAAC+TGG + chr5_3:44369932-44369951 None:intergenic 5.0%
!!! CTTTATTTTTTATATATAAT+TGG - chr5_3:44371423-44371442 Msa0813500:intron 5.0%
! TTTGATTGCGGCGTCGAGTA+TGG - chr5_3:44367195-44367214 Msa0813500:CDS 50.0%
!! GCAGCTTGCTGTGTATGGTA+GGG - chr5_3:44367267-44367286 Msa0813500:CDS 50.0%
ATGGTAGGGAGACTATGAGG+AGG - chr5_3:44367281-44367300 Msa0813500:CDS 50.0%
TCTTCGGTCGTGAGACTATG+AGG - chr5_3:44367660-44367679 Msa0813500:intron 50.0%
GTTTAGGGGATGTTGGGACT+TGG - chr5_3:44367704-44367723 Msa0813500:CDS 50.0%
CAATTGGAGGCTGATGACTG+TGG + chr5_3:44371692-44371711 None:intergenic 50.0%
GATGGAGAGGAACCACATAC+TGG - chr5_3:44371792-44371811 Msa0813500:intron 50.0%
AGCAGGGTTGTCATTGCTGA+TGG + chr5_3:44371829-44371848 None:intergenic 50.0%
!! AGGGAAGCACTCAATGATCC+AGG - chr5_3:44372080-44372099 Msa0813500:intron 50.0%
CAATACTGCCCTAGCACCAA+AGG + chr5_3:44372324-44372343 None:intergenic 50.0%
AACCCTATGGCTGCCATGTT+TGG - chr5_3:44372344-44372363 Msa0813500:intron 50.0%
CACCAAACATGGCAGCCATA+GGG + chr5_3:44372349-44372368 None:intergenic 50.0%
GAGGTTGTCAAAGCATGCTC+TGG - chr5_3:44372383-44372402 Msa0813500:intron 50.0%
TGTTGTTGGATCTGGTGCAC+TGG - chr5_3:44373267-44373286 Msa0813500:intron 50.0%
GTTGTTGGATCTGGTGCACT+GGG - chr5_3:44373268-44373287 Msa0813500:intron 50.0%
GGAGTTTCTTGTGGAGGTCA+AGG - chr5_3:44373322-44373341 Msa0813500:intron 50.0%
CCTGGCCAATATTCCAATCG+CGG + chr5_3:44373411-44373430 None:intergenic 50.0%
TAGGTGGGGAATGACCATCT+GGG + chr5_3:44373674-44373693 None:intergenic 50.0%
TTAGGTGGGGAATGACCATC+TGG + chr5_3:44373675-44373694 None:intergenic 50.0%
TTTCTCAGGGGGATCTCTTG+AGG + chr5_3:44373713-44373732 None:intergenic 50.0%
! ATCGGTGCTTGTTTCTCAGG+GGG + chr5_3:44373724-44373743 None:intergenic 50.0%
! CATCGGTGCTTGTTTCTCAG+GGG + chr5_3:44373725-44373744 None:intergenic 50.0%
! CACATCGGTGCTTGTTTCTC+AGG + chr5_3:44373727-44373746 None:intergenic 50.0%
TTGGGCTCGATCAGAGTTTG+AGG - chr5_3:44373789-44373808 Msa0813500:intron 50.0%
TGGGCTCGATCAGAGTTTGA+GGG - chr5_3:44373790-44373809 Msa0813500:intron 50.0%
! GAAGAATGCTGGTGATGCTC+AGG - chr5_3:44373882-44373901 Msa0813500:intron 50.0%
GTACTAGTTGCAGCATCCTC+AGG + chr5_3:44374154-44374173 None:intergenic 50.0%
GAGGATGCTGCAACTAGTAC+TGG - chr5_3:44374154-44374173 Msa0813500:intron 50.0%
! CGTTTCGGTGCAGACCAAAA+TGG + chr5_3:44374184-44374203 None:intergenic 50.0%
AGTGGACGAGGGAATCGTTT+CGG + chr5_3:44374199-44374218 None:intergenic 50.0%
! GAGATGACTTGGATCAGAGG+AGG + chr5_3:44374230-44374249 None:intergenic 50.0%
! CTGGAGATGACTTGGATCAG+AGG + chr5_3:44374233-44374252 None:intergenic 50.0%
TAGAGGCTGCCATCAGAAAC+TGG + chr5_3:44374252-44374271 None:intergenic 50.0%
! TTTTCACCCAGTCAGGGGTA+GGG + chr5_3:44374300-44374319 None:intergenic 50.0%
! TTTTTCACCCAGTCAGGGGT+AGG + chr5_3:44374301-44374320 None:intergenic 50.0%
! AGGGTTTTTCACCCAGTCAG+GGG + chr5_3:44374305-44374324 None:intergenic 50.0%
AACAACGGCATCATCCACAG+AGG + chr5_3:44374431-44374450 None:intergenic 50.0%
CAAATCTGCCACCAGGATTC+AGG - chr5_3:44374488-44374507 Msa0813500:intron 50.0%
AAGGGCTTCACCAAGCAACA+AGG + chr5_3:44374573-44374592 None:intergenic 50.0%
GCCCAGCTATCACATCCATA+TGG + chr5_3:44374762-44374781 None:intergenic 50.0%
GCCTTCAGCTTGTCAACTTC+AGG + chr5_3:44374817-44374836 None:intergenic 50.0%
AGGCCAAGTTTATTGCTGGG+CGG - chr5_3:44374833-44374852 Msa0813500:intron 50.0%
GATCCGCCCAGCAATAAACT+TGG + chr5_3:44374839-44374858 None:intergenic 50.0%
AAAGAGGGGCAGTGCTAAGT+TGG + chr5_3:44374971-44374990 None:intergenic 50.0%
! TTGATGACCTTTGCCGGAAC+TGG + chr5_3:44375006-44375025 None:intergenic 50.0%
! GTTGGACTGTTTGGGACAGA+TGG - chr5_3:44375040-44375059 Msa0813500:CDS 50.0%
TCAAGAAGCTCCCTGAGAGT+AGG + chr5_3:44375081-44375100 None:intergenic 50.0%
CTCTCAGGGAGCTTCTTGAT+TGG - chr5_3:44375082-44375101 Msa0813500:CDS 50.0%
! GGAGCTTCTTGATTGGCTGA+AGG - chr5_3:44375089-44375108 Msa0813500:CDS 50.0%
!! GCCTGAAGGCACTACGAATA+AGG + chr5_3:44375412-44375431 None:intergenic 50.0%
ATTCGTAGTGCCTTCAGGCA+CGG - chr5_3:44375413-44375432 Msa0813500:five_prime_UTR 50.0%
CGACGCCGCAATCAAATTCC+CGG + chr5_3:44367191-44367210 None:intergenic 55.0%
!! AGCAGGCAGCTTGCTGTGTA+TGG - chr5_3:44367262-44367281 Msa0813500:CDS 55.0%
!! GGCAGCTTGCTGTGTATGGT+AGG - chr5_3:44367266-44367285 Msa0813500:CDS 55.0%
! GTTCTTGTTTCCGGGATGCG+AGG - chr5_3:44367319-44367338 Msa0813500:CDS 55.0%
!! CGAGGACTTGGTGCTGAGAT+TGG - chr5_3:44367337-44367356 Msa0813500:CDS 55.0%
GGCTTCTGTCAGTAAGCTGC+AGG - chr5_3:44369154-44369173 Msa0813500:intron 55.0%
CACACAGGCCAAACAACCAC+AGG - chr5_3:44372037-44372056 Msa0813500:intron 55.0%
CTAGATGCAGTAGAGGTGGG+CGG + chr5_3:44372139-44372158 None:intergenic 55.0%
GCATCTAGCATTCCAGGCTC+TGG - chr5_3:44372151-44372170 Msa0813500:intron 55.0%
CTTCCTCTGAACCAGCGACA+GGG + chr5_3:44372205-44372224 None:intergenic 55.0%
TCTTCCTCTGAACCAGCGAC+AGG + chr5_3:44372206-44372225 None:intergenic 55.0%
CCACCAAACATGGCAGCCAT+AGG + chr5_3:44372350-44372369 None:intergenic 55.0%
CCTATGGCTGCCATGTTTGG+TGG - chr5_3:44372347-44372366 Msa0813500:intron 55.0%
GGGATTGTTGTGCAGGCAGA+GGG + chr5_3:44372851-44372870 None:intergenic 55.0%
AGGGATTGTTGTGCAGGCAG+AGG + chr5_3:44372852-44372871 None:intergenic 55.0%
CCGCGATTGGAATATTGGCC+AGG - chr5_3:44373408-44373427 Msa0813500:intron 55.0%
AGCAGCTGTTGCAGCAACTG+TGG + chr5_3:44373440-44373459 None:intergenic 55.0%
ATCGAGCCCAAGTCAAGCAG+TGG + chr5_3:44373780-44373799 None:intergenic 55.0%
! ATGCTGGTGATGCTCAGGCA+AGG - chr5_3:44373887-44373906 Msa0813500:intron 55.0%
! TGCTGGTGATGCTCAGGCAA+GGG - chr5_3:44373888-44373907 Msa0813500:intron 55.0%
GGAGCGCGTTCTTGAATGCT+TGG - chr5_3:44373918-44373937 Msa0813500:intron 55.0%
! CTTGGACAAGGAGAAGTGCG+AGG - chr5_3:44373936-44373955 Msa0813500:intron 55.0%
AGGAGAACTGCAGTGGACGA+GGG + chr5_3:44374210-44374229 None:intergenic 55.0%
TCAGAGGAGGAGAACTGCAG+TGG + chr5_3:44374217-44374236 None:intergenic 55.0%
TTGGTATCCCTACCCCTGAC+TGG - chr5_3:44374290-44374309 Msa0813500:intron 55.0%
TGGTATCCCTACCCCTGACT+GGG - chr5_3:44374291-44374310 Msa0813500:intron 55.0%
CACAGAGGCAGTAGAGAGAC+TGG + chr5_3:44374416-44374435 None:intergenic 55.0%
CAGTCTCTCTACTGCCTCTG+TGG - chr5_3:44374414-44374433 Msa0813500:intron 55.0%
TTGCGGTCAAATCTGCCACC+AGG - chr5_3:44374481-44374500 Msa0813500:intron 55.0%
GGCTTCATCCTGAATCCTGG+TGG + chr5_3:44374499-44374518 None:intergenic 55.0%
GCAGTTGAGGTTGCAATCGC+TGG + chr5_3:44374865-44374884 None:intergenic 55.0%
ACCTCAACTGCTATGGCCAC+TGG - chr5_3:44374874-44374893 Msa0813500:CDS 55.0%
! GGGCAGTGCTAAGTTGGCAA+AGG + chr5_3:44374965-44374984 None:intergenic 55.0%
! AGCACTGCCCCTCTTTTCCA+TGG - chr5_3:44374975-44374994 Msa0813500:CDS 55.0%
! TGGCTCGGCCATGGAAAAGA+GGG + chr5_3:44374986-44375005 None:intergenic 55.0%
TCCTAGGCACAAAGAGCGGA+TGG - chr5_3:44375173-44375192 Msa0813500:CDS 55.0%
TCCATCCGCTCTTTGTGCCT+AGG + chr5_3:44375177-44375196 None:intergenic 55.0%
ATGTTTGTCGCCGTGCCTGA+AGG + chr5_3:44375426-44375445 None:intergenic 55.0%
!! GCGGCGTCGAGTATGGCTTT+TGG - chr5_3:44367202-44367221 Msa0813500:CDS 60.0%
GTTTCCGGGATGCGAGGACT+TGG - chr5_3:44367325-44367344 Msa0813500:CDS 60.0%
AGCACCAAGTCCTCGCATCC+CGG + chr5_3:44367332-44367351 None:intergenic 60.0%
CTGAACCAGCGACAGGGAAG+CGG + chr5_3:44372199-44372218 None:intergenic 60.0%
!! CTTCCCTGTCGCTGGTTCAG+AGG - chr5_3:44372199-44372218 Msa0813500:intron 60.0%
TATTGAGTTCGCCCCCTCCC+CGG - chr5_3:44373021-44373040 Msa0813500:CDS 60.0%
GGCAGTTCCTCTTCCGCGAT+TGG - chr5_3:44373395-44373414 Msa0813500:intron 60.0%
CAGCAACTGTGGACTTCGCC+TGG + chr5_3:44373429-44373448 None:intergenic 60.0%
GAGGAGAACTGCAGTGGACG+AGG + chr5_3:44374211-44374230 None:intergenic 60.0%
GCCAGTGGCCATAGCAGTTG+AGG + chr5_3:44374878-44374897 None:intergenic 60.0%
CTCCAGACAGACAAGGCCAG+TGG + chr5_3:44374893-44374912 None:intergenic 60.0%
! GGATGGAGGGCACAAACTCG+AGG - chr5_3:44374927-44374946 Msa0813500:CDS 60.0%
GGCTCGGCCATGGAAAAGAG+GGG + chr5_3:44374985-44375004 None:intergenic 60.0%
!! CTGGCTCGGCCATGGAAAAG+AGG + chr5_3:44374987-44375006 None:intergenic 60.0%
TTCCATGGCCGAGCCAGTTC+CGG - chr5_3:44374990-44375009 Msa0813500:CDS 60.0%
GACCTTTGCCGGAACTGGCT+CGG + chr5_3:44375001-44375020 None:intergenic 60.0%
ATAGGCCGCTTCCCTGTCGC+TGG - chr5_3:44372191-44372210 Msa0813500:intron 65.0%
!! GGCCACTGGCCTTGTCTGTC+TGG - chr5_3:44374888-44374907 Msa0813500:CDS 65.0%
!! TGCCGGAACTGGCTCGGCCA+TGG + chr5_3:44374995-44375014 None:intergenic 70.0%
GGCCGAGCCAGTTCCGGCAA+AGG - chr5_3:44374996-44375015 Msa0813500:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 44366685 44375539 44366685 ID=Msa0813500;Name=Msa0813500
chr5_3 mRNA 44366685 44375539 44366685 ID=Msa0813500-mRNA-1;Parent=Msa0813500;Name=Msa0813500-mRNA-1;_AED=0.29;_eAED=0.29;_QI=147|1|1|1|0.83|0.71|7|201|1082
chr5_3 exon 44366685 44367482 44366685 ID=Msa0813500-mRNA-1:exon:13692;Parent=Msa0813500-mRNA-1
chr5_3 exon 44367690 44368122 44367690 ID=Msa0813500-mRNA-1:exon:13691;Parent=Msa0813500-mRNA-1
chr5_3 exon 44368232 44369100 44368232 ID=Msa0813500-mRNA-1:exon:13690;Parent=Msa0813500-mRNA-1
chr5_3 exon 44369797 44370591 44369797 ID=Msa0813500-mRNA-1:exon:13689;Parent=Msa0813500-mRNA-1
chr5_3 exon 44372977 44373194 44372977 ID=Msa0813500-mRNA-1:exon:13688;Parent=Msa0813500-mRNA-1
chr5_3 exon 44374866 44375215 44374866 ID=Msa0813500-mRNA-1:exon:13687;Parent=Msa0813500-mRNA-1
chr5_3 exon 44375406 44375539 44375406 ID=Msa0813500-mRNA-1:exon:13686;Parent=Msa0813500-mRNA-1
chr5_3 five_prime_UTR 44375406 44375539 44375406 ID=Msa0813500-mRNA-1:five_prime_utr;Parent=Msa0813500-mRNA-1
chr5_3 five_prime_UTR 44375203 44375215 44375203 ID=Msa0813500-mRNA-1:five_prime_utr;Parent=Msa0813500-mRNA-1
chr5_3 CDS 44374866 44375202 44374866 ID=Msa0813500-mRNA-1:cds;Parent=Msa0813500-mRNA-1
chr5_3 CDS 44372977 44373194 44372977 ID=Msa0813500-mRNA-1:cds;Parent=Msa0813500-mRNA-1
chr5_3 CDS 44369797 44370591 44369797 ID=Msa0813500-mRNA-1:cds;Parent=Msa0813500-mRNA-1
chr5_3 CDS 44368232 44369100 44368232 ID=Msa0813500-mRNA-1:cds;Parent=Msa0813500-mRNA-1
chr5_3 CDS 44367690 44368122 44367690 ID=Msa0813500-mRNA-1:cds;Parent=Msa0813500-mRNA-1
chr5_3 CDS 44366886 44367482 44366886 ID=Msa0813500-mRNA-1:cds;Parent=Msa0813500-mRNA-1
chr5_3 three_prime_UTR 44366685 44366885 44366685 ID=Msa0813500-mRNA-1:three_prime_utr;Parent=Msa0813500-mRNA-1
Gene Sequence

>Msa0813500

ATGCTTCCAAGAAAGAGACTTAGTGAAGGAGAAGTTGTTGTAGAAGAACCGATTAACAACAACAGCAACAGCGACTTAGGTTCAGTTAAGAAGGTGCGGAACGGTGAATCGACCGTGAACGAGAGTGACAAGAGTTTCAGTAGCAGCGGCGATAACAATAACAGTACCGGGAATTTGATTGCGGCGTCGAGTATGGCTTTTGGAAATTCTAACTCGCAGGAGATTGATGAGGATCTGCATAGCAGGCAGCTTGCTGTGTATGGTAGGGAGACTATGAGGAGGCTTTTCGCGAGTAGTGTTCTTGTTTCCGGGATGCGAGGACTTGGTGCTGAGATTGCAAAGAATCTTATTCTTGCTGGTGTAAAATCTGTAACCTTGCACGATGAAGGAACTGTAGAGTTATGGGATTTGTCCAGCAACTTTGTGTTTTCAGAAAATGATCTTGGTAAAAACAGGGCAGTGGCTTCTGTCAGTAAGCTGCAGGAACTCAATAACGCAGTGCTTGTACTAAGCTTGACAACTAAGCTGACCAAAGAACAACTTTCTAATTTCCAGGCTGTTGTGTTTACCGAAGTCAGTCTTGAGAAAGCTGTTGAGTTCAATGATTACTGCCACAGTCATCAGCCTCCAATTGCTTTTATTAAAACTGAAGTTAGAGGTCTTTTTGGTTCCGTGTTTTGTGATTTTGGGCCTGAGTTTACTGTTGTTGATGTCGATGGAGAGGAACCACATACTGGAATAATTGCGTCCATCAGCAATGACAACCCTGCTCTAGTTTCTTGTGTTGATGATGAGAGACTTGAGTTTCAGGATGGAGACCTTGTTGTATTCTCTGAAGTTCATGGTATGAAAGAGTTGAATGACGGAAAGCCAAGAAAGATTAAAAATGCTAGAGCATATTCATTCACTCTTGAAGAAGACACCACAAACTATGGTGCCTATGAAAAAGGTGGTATTGTCACACAGGCCAAACAACCACAGGTTTTGAACTTCAAACCTCTAAGGGAAGCACTCAATGATCCAGGCGAATTTCTTCTTAGCGATTTTTCTAAGTTTGACCGCCCACCTCTACTGCATCTAGCATTCCAGGCTCTGGATAAGTTCATTTCTGAGATAGGCCGCTTCCCTGTCGCTGGTTCAGAGGAAGATGCACATAAATTCATTTCTATCGCCAATAATATTAATGGTAACTTAGGTGATGGAAGGTTGGAAGATGTGAATCCCAAGCTTCTACAGCAATTTGCCTTTGGTGCTAGGGCAGTATTGAACCCTATGGCTGCCATGTTTGGTGGAATTGTAGGACAAGAGGTTGTCAAAGCATGCTCTGGCAAATTTCATCCACTGTTTCAGTTTTTCTATTTCGACTCTGTGGAATCACTTCCTACAGAACCATTGCATCCTAATGATTTAAAACCAATAAATAGTCGTTACGATGCTCAGATTTCAGTTTTTGGGCAAAAGTTACAGAAGAAATTTGAAGATGCTAAAGTGTTTGTTGTTGGATCTGGTGCACTGGGATGTGAATTTTTAAAGAATCTTGCCTTAATGGGAGTTTCTTGTGGAGGTCAAGGGAAGCTTACAGTCACTGATGATGATGTCATAGAGAAGAGTAACTTAAGCAGGCAGTTCCTCTTCCGCGATTGGAATATTGGCCAGGCGAAGTCCACAGTTGCTGCAACAGCTGCTGAATCTATAAACTCTCAACTAAATATTGAAGCTCTGCAGAACCGTGTTAGCTCTGAAACTGAAAATGTGTTTCATGATACCTTTTGGGAAAACTTGAGTGTTGTGATTAATGCACTAGATAATGTGAATGCAAGACTATACGTGGATCAGCGATGCCTATATTTCCAGAAACCACTTCTTGAATCTGGAACTCTTGGAGCTAAATGCAATACCCAGATGGTCATTCCCCACCTAACAGAAAACTATGGTGCCTCAAGAGATCCCCCTGAGAAACAAGCACCGATGTGTACTGTTCATTCATTTCCACACAACATTGACCACTGCTTGACTTGGGCTCGATCAGAGTTTGAGGGTTTGCTTGAGAAAACTCCAGCTGAAGTAAATGCATATTTATCCAACCCAAGTGAATATACTAATGCTATGAAGAATGCTGGTGATGCTCAGGCAAGGGATAATTTGGAGCGCGTTCTTGAATGCTTGGACAAGGAGAAGTGCGAGGCTTTTGAAGATTGTATTACTTGGGCCAGGCTTAAGTTTGAAGATTATTTTGCTAACCGAGTGAAGCAGTTAGCTTATACTTTTCCTGAGGATGCTGCAACTAGTACTGGAGCTCCATTTTGGTCTGCACCGAAACGATTCCCTCGTCCACTGCAGTTCTCCTCCTCTGATCCAAGTCATCTCCAGTTTCTGATGGCAGCCTCTATACTACGCGCAGAAACATTTGGTATCCCTACCCCTGACTGGGTGAAAAACCCTATGAAGTTGGCAGAAGTTATTGATAGAATGATAGTACCTGACTTTCAGCCAAAGAAGGATGCAAAAATAGTGACAGATGAGAAGGCAACCAGTCTCTCTACTGCCTCTGTGGATGATGCCGTTGTTATTGATGATCTAATTGTCAAGTTAGAGAGATTGCGGTCAAATCTGCCACCAGGATTCAGGATGAAGCCAATCCAGTTTGAGAAGGATGATGATACAAATTACCATATGGATGTGATAGCTGGGCTTGCCAACATGAGAGCACGCAATTACAGCATTCCTGAAGTTGACAAGCTGAAGGCCAAGTTTATTGCTGGGCGGATCATTCCAGCGATTGCAACCTCAACTGCTATGGCCACTGGCCTTGTCTGTCTGGAGTTTTACAAAGCTTTGGATGGAGGGCACAAACTCGAGGACTACCGAAACACCTTTGCCAACTTAGCACTGCCCCTCTTTTCCATGGCCGAGCCAGTTCCGGCAAAGGTCATCAAGCATCAAGATTTGAGTTGGACTGTTTGGGACAGATGGATTATAAAAGACAATCCTACTCTCAGGGAGCTTCTTGATTGGCTGAAGGAAAAAGGTTTGAATGCTTATAGTATTTCTTGTGGAAGTTGCCTGCTTTTCAATAGCATGTTTCCTAGGCACAAAGAGCGGATGGACAAAAAAGTTGTAGATTTAGCAAGGGATATTGCCAAGATGGAAATCCCTTCATACCGTCGTCACATAGATGTTGTTGTGGCTTGTGAGGATAAGGATGATAATGACATTGATATCCCTCAAGTATCCATTTATTTCCGTTGA
Protein sequence

>Msa0813500

MLPRKRLSEGEVVVEEPINNNSNSDLGSVKKVRNGESTVNESDKSFSSSGDNNNSTGNLIAASSMAFGNSNSQEIDEDLHSRQLAVYGRETMRRLFASSVLVSGMRGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSENDLGKNRAVASVSKLQELNNAVLVLSLTTKLTKEQLSNFQAVVFTEVSLEKAVEFNDYCHSHQPPIAFIKTEVRGLFGSVFCDFGPEFTVVDVDGEEPHTGIIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMKELNDGKPRKIKNARAYSFTLEEDTTNYGAYEKGGIVTQAKQPQVLNFKPLREALNDPGEFLLSDFSKFDRPPLLHLAFQALDKFISEIGRFPVAGSEEDAHKFISIANNINGNLGDGRLEDVNPKLLQQFAFGARAVLNPMAAMFGGIVGQEVVKACSGKFHPLFQFFYFDSVESLPTEPLHPNDLKPINSRYDAQISVFGQKLQKKFEDAKVFVVGSGALGCEFLKNLALMGVSCGGQGKLTVTDDDVIEKSNLSRQFLFRDWNIGQAKSTVAATAAESINSQLNIEALQNRVSSETENVFHDTFWENLSVVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLSNPSEYTNAMKNAGDAQARDNLERVLECLDKEKCEAFEDCITWARLKFEDYFANRVKQLAYTFPEDAATSTGAPFWSAPKRFPRPLQFSSSDPSHLQFLMAASILRAETFGIPTPDWVKNPMKLAEVIDRMIVPDFQPKKDAKIVTDEKATSLSTASVDDAVVIDDLIVKLERLRSNLPPGFRMKPIQFEKDDDTNYHMDVIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLEFYKALDGGHKLEDYRNTFANLALPLFSMAEPVPAKVIKHQDLSWTVWDRWIIKDNPTLRELLDWLKEKGLNAYSISCGSCLLFNSMFPRHKERMDKKVVDLARDIAKMEIPSYRRHIDVVVACEDKDDNDIDIPQVSIYFR*