Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0606080 | XP_003606998.1 | 97.514 | 362 | 9 | 0 | 1 | 362 | 1 | 362 | 0.0 | 744 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0606080 | sp|P43295|RD19B_ARATH | 73.889 | 360 | 91 | 3 | 1 | 358 | 1 | 359 | 0.0 | 562 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0606080 | G7JIL2 | 97.514 | 362 | 9 | 0 | 1 | 362 | 1 | 362 | 0.0 | 744 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000910 | Msa0606080 | 0.832052 | 1.177626e-55 | -8.615850e-47 |
Msa0010910 | Msa0606080 | 0.806259 | 8.974009e-50 | -8.615850e-47 |
Msa0016510 | Msa0606080 | 0.814463 | 1.521342e-51 | -8.615850e-47 |
Msa0024400 | Msa0606080 | 0.801877 | 7.317889e-49 | -8.615850e-47 |
Msa0043850 | Msa0606080 | 0.822057 | 2.904171e-53 | -8.615850e-47 |
Msa0046560 | Msa0606080 | 0.809487 | 1.846616e-50 | -8.615850e-47 |
Msa0047640 | Msa0606080 | 0.803650 | 3.149953e-49 | -8.615850e-47 |
Msa0051740 | Msa0606080 | 0.810390 | 1.180694e-50 | -8.615850e-47 |
Msa0074750 | Msa0606080 | 0.837355 | 5.459837e-57 | -8.615850e-47 |
Msa0076290 | Msa0606080 | 0.828081 | 1.096298e-54 | -8.615850e-47 |
Msa0077370 | Msa0606080 | 0.811496 | 6.800386e-51 | -8.615850e-47 |
Msa0081650 | Msa0606080 | 0.806886 | 6.614339e-50 | -8.615850e-47 |
Msa0081940 | Msa0606080 | 0.801053 | 1.079550e-48 | -8.615850e-47 |
Msa0082420 | Msa0606080 | 0.807851 | 4.131129e-50 | -8.615850e-47 |
Msa0089980 | Msa0606080 | 0.802828 | 4.660350e-49 | -8.615850e-47 |
Msa0090510 | Msa0606080 | 0.845483 | 3.948342e-59 | -8.615850e-47 |
Msa0090550 | Msa0606080 | 0.812788 | 3.555008e-51 | -8.615850e-47 |
Msa0106710 | Msa0606080 | 0.802673 | 5.017947e-49 | -8.615850e-47 |
Msa0117520 | Msa0606080 | 0.819344 | 1.220270e-52 | -8.615850e-47 |
Msa0604290 | Msa0606080 | 0.825301 | 5.050867e-54 | -8.615850e-47 |
Msa0606080 | Msa0608270 | 0.804065 | 2.583592e-49 | -8.615850e-47 |
Msa0606080 | Msa0621600 | 0.809243 | 2.083565e-50 | -8.615850e-47 |
Msa0606080 | Msa0622120 | 0.814638 | 1.391066e-51 | -8.615850e-47 |
Msa0606080 | Msa0622790 | 0.806038 | 9.985875e-50 | -8.615850e-47 |
Msa0606080 | Msa0623990 | 0.821613 | 3.678118e-53 | -8.615850e-47 |
Msa0606080 | Msa0624060 | 0.823853 | 1.107329e-53 | -8.615850e-47 |
Msa0606080 | Msa0640940 | 0.829822 | 4.150376e-55 | -8.615850e-47 |
Msa0606080 | Msa0641130 | 0.805654 | 1.202738e-49 | -8.615850e-47 |
Msa0606080 | Msa0645530 | 0.821271 | 4.411336e-53 | -8.615850e-47 |
Msa0606080 | Msa0647030 | 0.922127 | 1.472577e-88 | -8.615850e-47 |
Msa0606080 | Msa0648830 | 0.808645 | 2.797021e-50 | -8.615850e-47 |
Msa0606080 | Msa0651560 | 0.884763 | 1.452075e-71 | -8.615850e-47 |
Msa0606080 | Msa0652690 | 0.803832 | 2.887501e-49 | -8.615850e-47 |
Msa0606080 | Msa0657120 | 0.823799 | 1.140290e-53 | -8.615850e-47 |
Msa0606080 | Msa0658680 | 0.811056 | 8.474058e-51 | -8.615850e-47 |
Msa0606080 | Msa0673120 | 0.825191 | 5.363231e-54 | -8.615850e-47 |
Msa0606080 | Msa0676130 | 0.817013 | 4.109223e-52 | -8.615850e-47 |
Msa0606080 | Msa0676180 | 0.816433 | 5.543835e-52 | -8.615850e-47 |
Msa0606080 | Msa0679360 | 0.837773 | 4.263789e-57 | -8.615850e-47 |
Msa0606080 | Msa0682680 | 0.807961 | 3.912868e-50 | -8.615850e-47 |
Msa0606080 | Msa0685090 | 0.815338 | 9.730077e-52 | -8.615850e-47 |
Msa0606080 | Msa0697680 | 0.806910 | 6.537725e-50 | -8.615850e-47 |
Msa0606080 | Msa0701100 | 0.819965 | 8.801596e-53 | -8.615850e-47 |
Msa0606080 | Msa0703810 | 0.803488 | 3.403211e-49 | -8.615850e-47 |
Msa0606080 | Msa0705390 | 0.812358 | 4.413195e-51 | -8.615850e-47 |
Msa0606080 | Msa0707010 | 0.827895 | 1.214750e-54 | -8.615850e-47 |
Msa0606080 | Msa0709120 | 0.841656 | 4.162205e-58 | -8.615850e-47 |
Msa0606080 | Msa0727530 | 0.834278 | 3.287810e-56 | -8.615850e-47 |
Msa0606080 | Msa0743530 | 0.823834 | 1.119057e-53 | -8.615850e-47 |
Msa0606080 | Msa0743870 | 0.816342 | 5.810365e-52 | -8.615850e-47 |
Msa0606080 | Msa0746170 | 0.819073 | 1.406426e-52 | -8.615850e-47 |
Msa0606080 | Msa0746210 | 0.810762 | 9.811155e-51 | -8.615850e-47 |
Msa0606080 | Msa0756380 | 0.811759 | 5.960805e-51 | -8.615850e-47 |
Msa0606080 | Msa0772280 | 0.803210 | 3.887059e-49 | -8.615850e-47 |
Msa0606080 | Msa0779510 | 0.819256 | 1.278057e-52 | -8.615850e-47 |
Msa0606080 | Msa0789560 | 0.829056 | 6.370910e-55 | -8.615850e-47 |
Msa0606080 | Msa0813500 | 0.803477 | 3.421519e-49 | -8.615850e-47 |
Msa0606080 | Msa0823540 | 0.805265 | 1.450837e-49 | -8.615850e-47 |
Msa0606080 | Msa0844280 | 0.809337 | 1.988619e-50 | -8.615850e-47 |
Msa0606080 | Msa0865970 | 0.800281 | 1.551582e-48 | -8.615850e-47 |
Msa0606080 | Msa0866070 | 0.808486 | 3.024923e-50 | -8.615850e-47 |
Msa0606080 | Msa0910960 | 0.832072 | 1.164198e-55 | -8.615850e-47 |
Msa0606080 | Msa0933760 | 0.826257 | 2.995415e-54 | -8.615850e-47 |
Msa0606080 | Msa0934140 | 0.803931 | 2.754089e-49 | -8.615850e-47 |
Msa0606080 | Msa0945240 | 0.803923 | 2.765414e-49 | -8.615850e-47 |
Msa0606080 | Msa0985180 | 0.826821 | 2.198627e-54 | -8.615850e-47 |
Msa0606080 | Msa0985220 | 0.807002 | 6.253356e-50 | -8.615850e-47 |
Msa0606080 | Msa0992510 | 0.833035 | 6.718526e-56 | -8.615850e-47 |
Msa0606080 | Msa1002960 | 0.809810 | 1.573868e-50 | -8.615850e-47 |
Msa0606080 | Msa1022030 | 0.855250 | 7.154911e-62 | -8.615850e-47 |
Msa0606080 | Msa1036300 | 0.802123 | 6.514896e-49 | -8.615850e-47 |
Msa0606080 | Msa1037520 | 0.820675 | 6.051289e-53 | -8.615850e-47 |
Msa0606080 | Msa1042660 | 0.813801 | 2.129687e-51 | -8.615850e-47 |
Msa0606080 | Msa1052620 | 0.818038 | 2.414034e-52 | -8.615850e-47 |
Msa0606080 | Msa1070540 | 0.828541 | 8.488935e-55 | -8.615850e-47 |
Msa0606080 | Msa1089960 | 0.807766 | 4.305330e-50 | -8.615850e-47 |
Msa0606080 | Msa1101240 | 0.828236 | 1.005700e-54 | -8.615850e-47 |
Msa0606080 | Msa1109780 | -0.803769 | 2.975774e-49 | -8.615850e-47 |
Msa0606080 | Msa1109810 | 0.810222 | 1.283447e-50 | -8.615850e-47 |
Msa0606080 | Msa1122150 | 0.800942 | 1.137481e-48 | -8.615850e-47 |
Msa0606080 | Msa1127430 | 0.813218 | 2.861194e-51 | -8.615850e-47 |
Msa0606080 | Msa1128270 | 0.815437 | 9.249679e-52 | -8.615850e-47 |
Msa0606080 | Msa1130400 | 0.823691 | 1.208759e-53 | -8.615850e-47 |
Msa0606080 | Msa1132470 | 0.805003 | 1.646756e-49 | -8.615850e-47 |
Msa0606080 | Msa1133590 | 0.824215 | 9.108635e-54 | -8.615850e-47 |
Msa0606080 | Msa1137780 | 0.808718 | 2.699119e-50 | -8.615850e-47 |
Msa0606080 | Msa1140630 | 0.801053 | 1.079358e-48 | -8.615850e-47 |
Msa0606080 | Msa1178580 | 0.832506 | 9.091339e-56 | -8.615850e-47 |
Msa0606080 | Msa1190100 | -0.820757 | 5.792799e-53 | -8.615850e-47 |
Msa0606080 | Msa1205590 | 0.820665 | 6.083631e-53 | -8.615850e-47 |
Msa0606080 | Msa1206650 | 0.813515 | 2.461736e-51 | -8.615850e-47 |
Msa0606080 | Msa1208790 | 0.818082 | 2.360206e-52 | -8.615850e-47 |
Msa0606080 | Msa1209190 | 0.816839 | 4.496994e-52 | -8.615850e-47 |
Msa0606080 | Msa1209670 | 0.806045 | 9.955458e-50 | -8.615850e-47 |
Msa0606080 | Msa1212050 | 0.800607 | 1.331373e-48 | -8.615850e-47 |
Msa0606080 | Msa1212130 | 0.825215 | 5.294127e-54 | -8.615850e-47 |
Msa0606080 | Msa1221330 | 0.800571 | 1.354147e-48 | -8.615850e-47 |
Msa0606080 | Msa1229480 | 0.808485 | 3.026841e-50 | -8.615850e-47 |
Msa0606080 | Msa1233850 | 0.825085 | 5.681035e-54 | -8.615850e-47 |
Msa0606080 | Msa1234620 | 0.845595 | 3.681587e-59 | -8.615850e-47 |
Msa0606080 | Msa1236440 | 0.845235 | 4.608649e-59 | -8.615850e-47 |
Msa0606080 | Msa1254620 | 0.806438 | 8.225455e-50 | -8.615850e-47 |
Msa0606080 | Msa1258980 | 0.810613 | 1.056467e-50 | -8.615850e-47 |
Msa0606080 | Msa1259860 | 0.816694 | 4.845486e-52 | -8.615850e-47 |
Msa0606080 | Msa1271130 | 0.821991 | 3.008453e-53 | -8.615850e-47 |
Msa0606080 | Msa1276150 | 0.829691 | 4.468162e-55 | -8.615850e-47 |
Msa0606080 | Msa1277670 | 0.836356 | 9.818835e-57 | -8.615850e-47 |
Msa0606080 | Msa1297530 | 0.825606 | 4.276074e-54 | -8.615850e-47 |
Msa0606080 | Msa1298100 | 0.843493 | 1.354931e-58 | -8.615850e-47 |
Msa0606080 | Msa1304810 | 0.806109 | 9.647442e-50 | -8.615850e-47 |
Msa0606080 | Msa1304940 | 0.809470 | 1.862836e-50 | -8.615850e-47 |
Msa0606080 | Msa1325410 | -0.817252 | 3.630504e-52 | -8.615850e-47 |
Msa0606080 | Msa1330630 | 0.811372 | 7.234599e-51 | -8.615850e-47 |
Msa0606080 | Msa1336040 | 0.816396 | 5.651006e-52 | -8.615850e-47 |
Msa0606080 | Msa1339320 | 0.865074 | 7.686562e-65 | -8.615850e-47 |
Msa0606080 | Msa1340200 | 0.826199 | 3.093236e-54 | -8.615850e-47 |
Msa0606080 | Msa1366550 | 0.815708 | 8.048082e-52 | -8.615850e-47 |
Msa0606080 | Msa1369920 | -0.848812 | 4.828300e-60 | -8.615850e-47 |
Msa0606080 | Msa1370590 | 0.840673 | 7.548499e-58 | -8.615850e-47 |
Msa0606080 | Msa1372290 | 0.812089 | 5.053197e-51 | -8.615850e-47 |
Msa0606080 | Msa1373850 | 0.838074 | 3.567955e-57 | -8.615850e-47 |
Msa0606080 | Msa1378410 | 0.824626 | 7.289858e-54 | -8.615850e-47 |
Msa0606080 | Msa1382020 | 0.819528 | 1.107564e-52 | -8.615850e-47 |
Msa0606080 | Msa1384100 | 0.843876 | 1.069869e-58 | -8.615850e-47 |
Msa0606080 | Msa1386890 | 0.820787 | 5.702855e-53 | -8.615850e-47 |
Msa0606080 | Msa1391720 | 0.816142 | 6.441912e-52 | -8.615850e-47 |
Msa0606080 | Msa1400930 | 0.835241 | 1.881440e-56 | -8.615850e-47 |
Msa0606080 | Msa1407760 | 0.818170 | 2.254164e-52 | -8.615850e-47 |
Msa0606080 | Msa1411980 | 0.814757 | 1.309141e-51 | -8.615850e-47 |
Msa0606080 | Msa1419840 | 0.820331 | 7.257129e-53 | -8.615850e-47 |
Msa0606080 | Msa1428780 | 0.817940 | 2.541132e-52 | -8.615850e-47 |
Msa0606080 | Msa1433700 | 0.825740 | 3.975470e-54 | -8.615850e-47 |
Msa0606080 | Msa1434040 | 0.821839 | 3.262008e-53 | -8.615850e-47 |
Msa0606080 | Msa1437330 | 0.819402 | 1.183356e-52 | -8.615850e-47 |
Msa0606080 | Msa1437730 | 0.816704 | 4.820530e-52 | -8.615850e-47 |
Msa0606080 | Msa1442790 | 0.828901 | 6.949524e-55 | -8.615850e-47 |
Msa0606080 | Msa1442920 | 0.806486 | 8.036485e-50 | -8.615850e-47 |
Msa0606080 | Msa1444120 | 0.844028 | 9.742208e-59 | -8.615850e-47 |
Msa0606080 | Msa1446080 | 0.821503 | 3.900197e-53 | -8.615850e-47 |
Msa0606080 | Msa1463030 | 0.817172 | 3.784023e-52 | -8.615850e-47 |
Msa0606080 | Msa1464090 | 0.802395 | 5.726089e-49 | -8.615850e-47 |
Msa0124320 | Msa0606080 | 0.826778 | 2.251018e-54 | -8.615850e-47 |
Msa0137980 | Msa0606080 | 0.810909 | 9.116552e-51 | -8.615850e-47 |
Msa0139670 | Msa0606080 | 0.840212 | 9.959802e-58 | -8.615850e-47 |
Msa0160960 | Msa0606080 | 0.830425 | 2.958778e-55 | -8.615850e-47 |
Msa0163510 | Msa0606080 | 0.806150 | 9.460817e-50 | -8.615850e-47 |
Msa0171870 | Msa0606080 | 0.811921 | 5.498037e-51 | -8.615850e-47 |
Msa0173800 | Msa0606080 | 0.808750 | 2.655970e-50 | -8.615850e-47 |
Msa0183910 | Msa0606080 | 0.839913 | 1.192447e-57 | -8.615850e-47 |
Msa0191070 | Msa0606080 | 0.806549 | 7.794362e-50 | -8.615850e-47 |
Msa0191460 | Msa0606080 | 0.835556 | 1.566268e-56 | -8.615850e-47 |
Msa0191560 | Msa0606080 | 0.838901 | 2.183855e-57 | -8.615850e-47 |
Msa0194080 | Msa0606080 | 0.818071 | 2.373234e-52 | -8.615850e-47 |
Msa0194920 | Msa0606080 | 0.821615 | 3.674422e-53 | -8.615850e-47 |
Msa0196670 | Msa0606080 | 0.801846 | 7.425452e-49 | -8.615850e-47 |
Msa0202730 | Msa0606080 | 0.801440 | 8.997325e-49 | -8.615850e-47 |
Msa0204960 | Msa0606080 | 0.805274 | 1.444994e-49 | -8.615850e-47 |
Msa0206330 | Msa0606080 | 0.803129 | 4.039541e-49 | -8.615850e-47 |
Msa0210260 | Msa0606080 | 0.815905 | 7.273465e-52 | -8.615850e-47 |
Msa0215990 | Msa0606080 | 0.807076 | 6.030986e-50 | -8.615850e-47 |
Msa0217670 | Msa0606080 | 0.862024 | 6.792560e-64 | -8.615850e-47 |
Msa0230610 | Msa0606080 | 0.803407 | 3.538635e-49 | -8.615850e-47 |
Msa0233370 | Msa0606080 | 0.816219 | 6.190190e-52 | -8.615850e-47 |
Msa0233560 | Msa0606080 | 0.809917 | 1.493133e-50 | -8.615850e-47 |
Msa0234090 | Msa0606080 | 0.824807 | 6.607361e-54 | -8.615850e-47 |
Msa0235940 | Msa0606080 | 0.813188 | 2.905240e-51 | -8.615850e-47 |
Msa0237300 | Msa0606080 | 0.801383 | 9.239444e-49 | -8.615850e-47 |
Msa0373880 | Msa0606080 | 0.803472 | 3.429756e-49 | -8.615850e-47 |
Msa0376420 | Msa0606080 | 0.815904 | 7.280528e-52 | -8.615850e-47 |
Msa0376600 | Msa0606080 | 0.827056 | 1.931302e-54 | -8.615850e-47 |
Msa0382310 | Msa0606080 | 0.834394 | 3.075076e-56 | -8.615850e-47 |
Msa0382370 | Msa0606080 | 0.852180 | 5.467898e-61 | -8.615850e-47 |
Msa0385500 | Msa0606080 | 0.807376 | 5.208983e-50 | -8.615850e-47 |
Msa0388730 | Msa0606080 | 0.810756 | 9.838890e-51 | -8.615850e-47 |
Msa0390480 | Msa0606080 | 0.806432 | 8.248122e-50 | -8.615850e-47 |
Msa0395980 | Msa0606080 | 0.871363 | 7.235047e-67 | -8.615850e-47 |
Msa0403470 | Msa0606080 | -0.800294 | 1.541995e-48 | -8.615850e-47 |
Msa0403490 | Msa0606080 | 0.814638 | 1.391512e-51 | -8.615850e-47 |
Msa0403770 | Msa0606080 | 0.808332 | 3.262065e-50 | -8.615850e-47 |
Msa0428580 | Msa0606080 | 0.800540 | 1.373821e-48 | -8.615850e-47 |
Msa0431210 | Msa0606080 | 0.843331 | 1.496671e-58 | -8.615850e-47 |
Msa0432160 | Msa0606080 | 0.857937 | 1.160893e-62 | -8.615850e-47 |
Msa0440510 | Msa0606080 | 0.872688 | 2.623874e-67 | -8.615850e-47 |
Msa0476680 | Msa0606080 | 0.851360 | 9.334641e-61 | -8.615850e-47 |
Msa0481970 | Msa0606080 | 0.802254 | 6.122278e-49 | -8.615850e-47 |
Msa0482040 | Msa0606080 | 0.805589 | 1.241243e-49 | -8.615850e-47 |
Msa0244970 | Msa0606080 | 0.843568 | 1.293878e-58 | -8.615850e-47 |
Msa0244980 | Msa0606080 | 0.821686 | 3.537846e-53 | -8.615850e-47 |
Msa0257490 | Msa0606080 | 0.823807 | 1.135143e-53 | -8.615850e-47 |
Msa0271790 | Msa0606080 | 0.812072 | 5.096514e-51 | -8.615850e-47 |
Msa0274720 | Msa0606080 | 0.807920 | 3.993347e-50 | -8.615850e-47 |
Msa0283420 | Msa0606080 | 0.820418 | 6.931620e-53 | -8.615850e-47 |
Msa0288010 | Msa0606080 | -0.836295 | 1.017262e-56 | -8.615850e-47 |
Msa0296790 | Msa0606080 | 0.844944 | 5.522976e-59 | -8.615850e-47 |
Msa0308440 | Msa0606080 | 0.817164 | 3.800095e-52 | -8.615850e-47 |
Msa0310430 | Msa0606080 | 0.813834 | 2.094602e-51 | -8.615850e-47 |
Msa0315520 | Msa0606080 | 0.806911 | 6.535721e-50 | -8.615850e-47 |
Msa0317960 | Msa0606080 | 0.803846 | 2.868415e-49 | -8.615850e-47 |
Msa0321690 | Msa0606080 | 0.832991 | 6.892779e-56 | -8.615850e-47 |
Msa0336450 | Msa0606080 | 0.810248 | 1.266795e-50 | -8.615850e-47 |
Msa0347990 | Msa0606080 | 0.804558 | 2.039494e-49 | -8.615850e-47 |
Msa0362890 | Msa0606080 | 0.860024 | 2.756004e-63 | -8.615850e-47 |
Msa0482940 | Msa0606080 | 0.840159 | 1.028159e-57 | -8.615850e-47 |
Msa0491000 | Msa0606080 | 0.860444 | 2.057434e-63 | -8.615850e-47 |
Msa0516240 | Msa0606080 | 0.813007 | 3.182929e-51 | -8.615850e-47 |
Msa0520270 | Msa0606080 | 0.829945 | 3.874070e-55 | -8.615850e-47 |
Msa0521010 | Msa0606080 | 0.851731 | 7.333160e-61 | -8.615850e-47 |
Msa0526020 | Msa0606080 | 0.815222 | 1.032454e-51 | -8.615850e-47 |
Msa0527540 | Msa0606080 | 0.811550 | 6.618680e-51 | -8.615850e-47 |
Msa0527740 | Msa0606080 | 0.843954 | 1.019550e-58 | -8.615850e-47 |
Msa0529000 | Msa0606080 | 0.801570 | 8.461647e-49 | -8.615850e-47 |
Msa0529670 | Msa0606080 | 0.804840 | 1.780318e-49 | -8.615850e-47 |
Msa0534980 | Msa0606080 | 0.817450 | 3.277927e-52 | -8.615850e-47 |
Msa0542560 | Msa0606080 | 0.826848 | 2.166121e-54 | -8.615850e-47 |
Msa0544170 | Msa0606080 | 0.812223 | 4.722495e-51 | -8.615850e-47 |
Msa0544730 | Msa0606080 | 0.820512 | 6.596353e-53 | -8.615850e-47 |
Msa0545050 | Msa0606080 | 0.806290 | 8.840157e-50 | -8.615850e-47 |
Msa0547160 | Msa0606080 | 0.800611 | 1.329081e-48 | -8.615850e-47 |
Msa0550610 | Msa0606080 | 0.868483 | 6.315243e-66 | -8.615850e-47 |
Msa0560500 | Msa0606080 | 0.803536 | 3.326187e-49 | -8.615850e-47 |
Msa0561240 | Msa0606080 | 0.801013 | 1.099929e-48 | -8.615850e-47 |
Msa0566350 | Msa0606080 | 0.854743 | 1.004616e-61 | -8.615850e-47 |
Msa0566750 | Msa0606080 | 0.849721 | 2.696728e-60 | -8.615850e-47 |
Msa0572750 | Msa0606080 | 0.800589 | 1.342508e-48 | -8.615850e-47 |
Msa0581400 | Msa0606080 | 0.824815 | 6.577250e-54 | -8.615850e-47 |
Msa0600080 | Msa0606080 | 0.808214 | 3.456882e-50 | -8.615850e-47 |
Msa0600450 | Msa0606080 | 0.833982 | 3.898824e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0606080 | MtrunA17_Chr4g0035551 | 97.514 | 362 | 9 | 0 | 1 | 362 | 1 | 362 | 0.0 | 744 |
Msa0606080 | MtrunA17_Chr1g0155781 | 70.652 | 368 | 96 | 6 | 1 | 360 | 1 | 364 | 0.0 | 535 |
Msa0606080 | MtrunA17_Chr4g0036281 | 67.935 | 368 | 76 | 7 | 1 | 363 | 1 | 331 | 7.95e-177 | 494 |
Msa0606080 | MtrunA17_Chr4g0036731 | 68.681 | 364 | 70 | 7 | 3 | 363 | 5 | 327 | 1.19e-176 | 493 |
Msa0606080 | MtrunA17_Chr4g0037291 | 67.956 | 362 | 78 | 6 | 4 | 363 | 47 | 372 | 2.09e-176 | 494 |
Msa0606080 | MtrunA17_Chr1g0199131 | 54.318 | 359 | 153 | 6 | 10 | 360 | 15 | 370 | 2.33e-142 | 409 |
Msa0606080 | MtrunA17_Chr1g0208261 | 42.667 | 300 | 146 | 7 | 50 | 341 | 94 | 375 | 7.04e-68 | 222 |
Msa0606080 | MtrunA17_Chr4g0070441 | 38.356 | 365 | 185 | 11 | 8 | 355 | 6 | 347 | 7.36e-67 | 214 |
Msa0606080 | MtrunA17_Chr4g0041061 | 38.310 | 355 | 178 | 13 | 5 | 348 | 12 | 336 | 2.36e-66 | 213 |
Msa0606080 | MtrunA17_Chr0c27g0493921 | 38.567 | 363 | 183 | 11 | 8 | 353 | 6 | 345 | 4.17e-66 | 213 |
Msa0606080 | MtrunA17_Chr4g0024411 | 40.063 | 317 | 152 | 10 | 54 | 353 | 44 | 339 | 1.63e-65 | 211 |
Msa0606080 | MtrunA17_Chr4g0040881 | 39.634 | 328 | 167 | 12 | 32 | 348 | 29 | 336 | 1.76e-65 | 211 |
Msa0606080 | MtrunA17_Chr4g0041081 | 38.438 | 333 | 174 | 12 | 32 | 353 | 29 | 341 | 3.28e-64 | 207 |
Msa0606080 | MtrunA17_Chr3g0134231 | 36.676 | 349 | 186 | 10 | 5 | 341 | 16 | 341 | 5.06e-64 | 211 |
Msa0606080 | MtrunA17_Chr5g0405751 | 39.252 | 321 | 166 | 11 | 45 | 353 | 37 | 340 | 1.36e-63 | 206 |
Msa0606080 | MtrunA17_Chr4g0053311 | 39.496 | 357 | 154 | 14 | 5 | 341 | 7 | 321 | 1.42e-63 | 206 |
Msa0606080 | MtrunA17_Chr4g0040851 | 34.270 | 356 | 206 | 10 | 5 | 353 | 22 | 356 | 1.13e-62 | 204 |
Msa0606080 | MtrunA17_Chr3g0144281 | 38.291 | 316 | 167 | 10 | 48 | 353 | 47 | 344 | 2.65e-62 | 203 |
Msa0606080 | MtrunA17_Chr4g0041481 | 37.107 | 318 | 175 | 8 | 38 | 348 | 32 | 331 | 4.44e-62 | 202 |
Msa0606080 | MtrunA17_Chr4g0041521 | 37.417 | 302 | 166 | 7 | 54 | 348 | 46 | 331 | 8.91e-62 | 201 |
Msa0606080 | MtrunA17_Chr4g0060251 | 39.228 | 311 | 163 | 9 | 54 | 353 | 46 | 341 | 4.24e-61 | 199 |
Msa0606080 | MtrunA17_Chr3g0142071 | 37.730 | 326 | 160 | 12 | 48 | 353 | 50 | 352 | 7.48e-59 | 197 |
Msa0606080 | MtrunA17_Chr4g0041471 | 35.831 | 307 | 169 | 9 | 54 | 348 | 43 | 333 | 1.16e-57 | 191 |
Msa0606080 | MtrunA17_Chr3g0116551 | 37.458 | 299 | 158 | 8 | 63 | 348 | 54 | 336 | 1.28e-57 | 191 |
Msa0606080 | MtrunA17_Chr2g0315491 | 37.417 | 302 | 168 | 6 | 54 | 348 | 45 | 332 | 1.38e-57 | 190 |
Msa0606080 | MtrunA17_Chr4g0058081 | 38.033 | 305 | 157 | 10 | 58 | 348 | 49 | 335 | 4.44e-56 | 187 |
Msa0606080 | MtrunA17_Chr8g0379151 | 33.962 | 371 | 197 | 14 | 4 | 352 | 24 | 368 | 1.98e-55 | 186 |
Msa0606080 | MtrunA17_Chr2g0325121 | 35.000 | 320 | 180 | 8 | 48 | 359 | 39 | 338 | 1.24e-54 | 182 |
Msa0606080 | MtrunA17_Chr1g0153011 | 37.037 | 351 | 154 | 13 | 9 | 341 | 21 | 322 | 3.15e-54 | 184 |
Msa0606080 | MtrunA17_Chr2g0283901 | 35.826 | 321 | 172 | 11 | 48 | 353 | 51 | 352 | 3.61e-54 | 185 |
Msa0606080 | MtrunA17_Chr2g0283741 | 32.258 | 372 | 196 | 14 | 8 | 350 | 8 | 352 | 5.96e-54 | 182 |
Msa0606080 | MtrunA17_Chr2g0319991 | 36.336 | 333 | 179 | 14 | 41 | 358 | 30 | 344 | 2.32e-52 | 177 |
Msa0606080 | MtrunA17_Chr2g0283671 | 41.629 | 221 | 111 | 5 | 122 | 341 | 5 | 208 | 1.27e-50 | 169 |
Msa0606080 | MtrunA17_Chr7g0248391 | 32.288 | 319 | 179 | 9 | 42 | 348 | 36 | 329 | 2.02e-46 | 161 |
Msa0606080 | MtrunA17_Chr2g0311471 | 32.086 | 374 | 197 | 15 | 4 | 353 | 2 | 342 | 2.26e-46 | 161 |
Msa0606080 | MtrunA17_Chr2g0311381 | 32.051 | 390 | 196 | 17 | 1 | 359 | 1 | 352 | 3.21e-43 | 153 |
Msa0606080 | MtrunA17_Chr7g0248811 | 31.230 | 317 | 186 | 8 | 42 | 348 | 33 | 327 | 6.15e-43 | 152 |
Msa0606080 | MtrunA17_Chr1g0156161 | 40.991 | 222 | 111 | 7 | 129 | 347 | 47 | 251 | 1.17e-40 | 144 |
Msa0606080 | MtrunA17_Chr2g0311391 | 29.095 | 409 | 202 | 16 | 4 | 362 | 2 | 372 | 2.77e-39 | 143 |
Msa0606080 | MtrunA17_Chr8g0379671 | 48.529 | 136 | 54 | 4 | 172 | 306 | 23 | 143 | 2.67e-37 | 132 |
Msa0606080 | MtrunA17_Chr2g0283751 | 30.888 | 259 | 152 | 7 | 6 | 256 | 12 | 251 | 2.60e-34 | 128 |
Msa0606080 | MtrunA17_Chr7g0271031 | 29.861 | 288 | 155 | 14 | 95 | 353 | 110 | 379 | 1.32e-23 | 100 |
Msa0606080 | MtrunA17_Chr7g0271041 | 28.671 | 286 | 161 | 12 | 95 | 353 | 66 | 335 | 1.47e-22 | 97.4 |
Msa0606080 | MtrunA17_Chr1g0156771 | 46.154 | 117 | 50 | 5 | 126 | 239 | 50 | 156 | 1.06e-21 | 90.5 |
Msa0606080 | MtrunA17_Chr2g0311091 | 32.292 | 192 | 102 | 7 | 7 | 181 | 4 | 184 | 7.30e-20 | 86.3 |
Msa0606080 | MtrunA17_Chr2g0283661 | 36.879 | 141 | 79 | 3 | 54 | 184 | 39 | 179 | 2.54e-19 | 86.7 |
Msa0606080 | MtrunA17_Chr2g0283661 | 34.746 | 118 | 69 | 3 | 244 | 360 | 161 | 271 | 9.48e-14 | 70.9 |
Msa0606080 | MtrunA17_Chr7g0248421 | 32.258 | 155 | 91 | 3 | 155 | 307 | 57 | 199 | 8.22e-19 | 84.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0606080 | AT2G21430.1 | 73.889 | 360 | 91 | 3 | 1 | 358 | 1 | 359 | 0.0 | 562 |
Msa0606080 | AT4G39090.1 | 72.404 | 366 | 97 | 3 | 1 | 362 | 1 | 366 | 0.0 | 556 |
Msa0606080 | AT4G16190.1 | 67.914 | 374 | 108 | 5 | 1 | 363 | 1 | 373 | 0.0 | 512 |
Msa0606080 | AT3G54940.2 | 58.726 | 361 | 132 | 7 | 6 | 356 | 9 | 362 | 2.52e-154 | 439 |
Msa0606080 | AT3G54940.3 | 54.182 | 275 | 110 | 6 | 6 | 271 | 9 | 276 | 1.62e-100 | 299 |
Msa0606080 | AT5G60360.1 | 39.640 | 333 | 173 | 9 | 31 | 353 | 39 | 353 | 1.07e-67 | 217 |
Msa0606080 | AT3G45310.1 | 38.764 | 356 | 183 | 11 | 10 | 348 | 11 | 348 | 2.11e-67 | 216 |
Msa0606080 | AT3G19400.1 | 39.879 | 331 | 165 | 11 | 36 | 353 | 36 | 345 | 5.57e-67 | 216 |
Msa0606080 | AT5G60360.3 | 40.061 | 327 | 168 | 9 | 31 | 347 | 39 | 347 | 1.08e-66 | 215 |
Msa0606080 | AT5G60360.2 | 39.877 | 326 | 168 | 9 | 31 | 346 | 39 | 346 | 3.27e-66 | 213 |
Msa0606080 | AT3G45310.2 | 38.418 | 354 | 183 | 11 | 10 | 346 | 11 | 346 | 5.36e-66 | 213 |
Msa0606080 | AT3G19390.1 | 38.227 | 361 | 182 | 12 | 8 | 353 | 8 | 342 | 4.08e-65 | 213 |
Msa0606080 | AT1G47128.1 | 40.541 | 296 | 156 | 5 | 50 | 341 | 54 | 333 | 1.14e-64 | 213 |
Msa0606080 | AT1G09850.1 | 39.198 | 324 | 166 | 11 | 48 | 359 | 32 | 336 | 2.20e-64 | 211 |
Msa0606080 | AT1G20850.1 | 38.801 | 317 | 166 | 8 | 48 | 353 | 51 | 350 | 9.33e-64 | 207 |
Msa0606080 | AT5G45890.1 | 34.986 | 363 | 193 | 10 | 1 | 348 | 3 | 337 | 3.77e-63 | 205 |
Msa0606080 | AT5G43060.1 | 41.844 | 282 | 143 | 7 | 64 | 341 | 70 | 334 | 9.77e-63 | 207 |
Msa0606080 | AT1G29090.1 | 37.466 | 363 | 177 | 14 | 6 | 348 | 14 | 346 | 1.82e-62 | 204 |
Msa0606080 | AT1G06260.1 | 38.154 | 325 | 160 | 13 | 45 | 353 | 40 | 339 | 4.68e-62 | 202 |
Msa0606080 | AT3G43960.1 | 40.956 | 293 | 152 | 7 | 56 | 341 | 49 | 327 | 7.59e-62 | 202 |
Msa0606080 | AT4G36880.1 | 39.446 | 289 | 148 | 6 | 64 | 341 | 69 | 341 | 2.17e-60 | 199 |
Msa0606080 | AT4G35350.1 | 36.709 | 316 | 173 | 8 | 48 | 353 | 51 | 349 | 2.77e-60 | 198 |
Msa0606080 | AT4G23520.1 | 34.711 | 363 | 194 | 14 | 9 | 353 | 9 | 346 | 3.08e-59 | 195 |
Msa0606080 | AT3G48340.1 | 40.000 | 295 | 149 | 8 | 58 | 341 | 47 | 324 | 1.38e-58 | 194 |
Msa0606080 | AT2G27420.1 | 36.593 | 317 | 161 | 11 | 54 | 348 | 41 | 339 | 1.20e-57 | 191 |
Msa0606080 | AT5G50260.1 | 39.423 | 312 | 144 | 11 | 58 | 348 | 47 | 334 | 6.57e-56 | 187 |
Msa0606080 | AT1G29080.1 | 36.943 | 314 | 168 | 9 | 54 | 353 | 45 | 342 | 2.29e-54 | 182 |
Msa0606080 | AT2G34080.1 | 33.058 | 363 | 195 | 13 | 5 | 348 | 3 | 336 | 3.03e-54 | 182 |
Msa0606080 | AT3G48350.1 | 34.857 | 350 | 187 | 11 | 7 | 342 | 3 | 325 | 3.66e-54 | 182 |
Msa0606080 | AT3G49340.1 | 34.505 | 313 | 172 | 11 | 54 | 351 | 41 | 335 | 1.20e-52 | 178 |
Msa0606080 | AT4G11320.2 | 34.431 | 334 | 182 | 9 | 29 | 348 | 41 | 351 | 1.25e-51 | 176 |
Msa0606080 | AT4G11320.1 | 34.431 | 334 | 182 | 9 | 29 | 348 | 41 | 351 | 1.25e-51 | 176 |
Msa0606080 | AT4G11310.1 | 32.312 | 359 | 204 | 10 | 6 | 348 | 9 | 344 | 3.24e-51 | 175 |
Msa0606080 | AT3G19400.2 | 39.431 | 246 | 133 | 6 | 36 | 276 | 36 | 270 | 1.97e-50 | 171 |
Msa0606080 | AT4G35350.2 | 35.622 | 233 | 137 | 4 | 48 | 276 | 51 | 274 | 8.14e-45 | 156 |
Msa0606080 | AT1G29110.1 | 32.476 | 311 | 165 | 9 | 54 | 348 | 44 | 325 | 7.09e-43 | 152 |
Msa0606080 | AT3G48350.2 | 32.787 | 305 | 155 | 10 | 7 | 287 | 3 | 281 | 1.77e-38 | 139 |
Msa0606080 | AT1G02305.1 | 30.556 | 288 | 151 | 15 | 95 | 352 | 69 | 337 | 6.18e-23 | 99.0 |
Msa0606080 | AT4G01610.1 | 29.560 | 318 | 169 | 14 | 61 | 349 | 40 | 331 | 7.25e-23 | 98.6 |
Msa0606080 | AT4G01610.2 | 29.245 | 318 | 170 | 14 | 61 | 349 | 40 | 331 | 9.67e-22 | 95.5 |
Msa0606080 | AT1G02300.1 | 27.597 | 308 | 154 | 17 | 95 | 352 | 66 | 354 | 3.67e-18 | 85.5 |
Find 99 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGCATATATACTGCATTTA+AGG | 0.130654 | 4_2:-52178817 | None:intergenic |
AACCTATTTAAACATAAGTT+TGG | 0.234066 | 4_2:+52177489 | Msa0606080:CDS |
TCGACCACCTGTCGGATTAT+TGG | 0.251997 | 4_2:-52177429 | None:intergenic |
TCCCAAACTTATGTTTAAAT+AGG | 0.268902 | 4_2:-52177491 | None:intergenic |
CCAAGGATGAACATGATTAC+AGG | 0.304516 | 4_2:+52177526 | Msa0606080:CDS |
GGTGAGACTTGGGGAGAAAA+TGG | 0.310928 | 4_2:+52178981 | Msa0606080:CDS |
CTGGAGCCTATTCGCCTATT+AGG | 0.320950 | 4_2:+52178919 | Msa0606080:CDS |
GGAGTTTCGTCAGAGCGTTT+TGG | 0.321592 | 4_2:+52177650 | Msa0606080:CDS |
GGGGCTGCATTTGCATCTTT+CGG | 0.325671 | 4_2:-52177693 | None:intergenic |
TGAATACTGGCAACAATTCA+TGG | 0.349199 | 4_2:-52179146 | None:intergenic |
GAAGAAGACTATCCTTATTC+TGG | 0.363696 | 4_2:+52178562 | Msa0606080:CDS |
AGATTATCTGTCGGAAGAAT+CGG | 0.365413 | 4_2:-52177714 | None:intergenic |
CCACGATCAGTACCAGAATA+AGG | 0.365501 | 4_2:-52178574 | None:intergenic |
ACTAGATCATGGAGTGTTAC+TGG | 0.371273 | 4_2:+52178884 | Msa0606080:CDS |
ACCTATTTAAACATAAGTTT+GGG | 0.393244 | 4_2:+52177490 | Msa0606080:CDS |
AGTCTCTTTGAGCATATGTA+TGG | 0.401014 | 4_2:-52178864 | None:intergenic |
GGCTTCTCCTTCATCCTAAT+AGG | 0.407412 | 4_2:-52178933 | None:intergenic |
TCACAAGAACCCGGTTGCTC+TGG | 0.408096 | 4_2:-52178469 | None:intergenic |
GGAGTGTTACTGGTGGGATA+TGG | 0.410428 | 4_2:+52178894 | Msa0606080:CDS |
CCACATTAAAATATGAATAC+TGG | 0.419218 | 4_2:-52179159 | None:intergenic |
GGATGAAGGAGAAGCCATAT+TGG | 0.423435 | 4_2:+52178940 | Msa0606080:CDS |
TGCTAAGAAGCATCAATTGA+TGG | 0.425569 | 4_2:+52177578 | Msa0606080:CDS |
GATTATCTGTCGGAAGAATC+GGG | 0.426123 | 4_2:-52177713 | None:intergenic |
CTTCATCCTAATAGGCGAAT+AGG | 0.432818 | 4_2:-52178925 | None:intergenic |
TGACAAGATTAGCGGCAATC+TGG | 0.437809 | 4_2:-52178669 | None:intergenic |
CAACCGGGTTCTTGTGATGC+CGG | 0.438520 | 4_2:+52178475 | Msa0606080:CDS |
AACAACAATTTATAGATGTA+TGG | 0.449877 | 4_2:+52179246 | Msa0606080:three_prime_UTR |
ATAGTGTGATCCAGAGCAAC+CGG | 0.450276 | 4_2:+52178459 | Msa0606080:intron |
TCTTGTGATGCCGGGTGCAA+TGG | 0.456716 | 4_2:+52178484 | Msa0606080:CDS |
CCTGTAATCATGTTCATCCT+TGG | 0.456777 | 4_2:-52177526 | None:intergenic |
AAAACTCATGGGGTGAGACT+TGG | 0.466256 | 4_2:+52178970 | Msa0606080:CDS |
GCATCAATTGATGGATCCTT+CGG | 0.466749 | 4_2:+52177587 | Msa0606080:CDS |
TGTTGGAGTTTCAGTACAAC+CGG | 0.469204 | 4_2:+52177912 | Msa0606080:CDS |
ATGGATCCTTCGGCGGTTCA+CGG | 0.470073 | 4_2:+52177597 | Msa0606080:CDS |
AAACTCATGGGGTGAGACTT+GGG | 0.470356 | 4_2:+52178971 | Msa0606080:CDS |
GGTTGCAATTGCGGTAAGTA+AGG | 0.473415 | 4_2:-52177256 | None:intergenic |
ATGGATACTACAAAATATGC+AGG | 0.476628 | 4_2:+52179000 | Msa0606080:CDS |
TCTTCCGACAGATAATCTTC+CGG | 0.486877 | 4_2:+52177719 | Msa0606080:CDS |
TGGAAAATCGCAGAATAGAA+TGG | 0.491231 | 4_2:-52177310 | None:intergenic |
AACCGGGTTCTTGTGATGCC+GGG | 0.494687 | 4_2:+52178476 | Msa0606080:CDS |
ATTGGATCTTCTCCTTCGTC+CGG | 0.505970 | 4_2:-52177411 | None:intergenic |
TCTCTCCAATCAAAATCCTC+CGG | 0.506268 | 4_2:-52177738 | None:intergenic |
TTACTGGTGGGATATGGATC+TGG | 0.507620 | 4_2:+52178900 | Msa0606080:CDS |
TCAATTGATGCTTCTTAGCA+CGG | 0.511562 | 4_2:-52177575 | None:intergenic |
GACGATGAAGAAGTGCGGTT+GGG | 0.513257 | 4_2:+52177450 | Msa0606080:CDS |
TGGGAAGGTTTATTCTTCCA+AGG | 0.519917 | 4_2:+52177509 | Msa0606080:CDS |
GGTGCTCACTTTCTCTCGAC+CGG | 0.523916 | 4_2:+52177945 | Msa0606080:CDS |
ATATATAGAGGTTGCAATTG+CGG | 0.543125 | 4_2:-52177265 | None:intergenic |
CCTTATTCTGGTACTGATCG+TGG | 0.543158 | 4_2:+52178574 | Msa0606080:CDS |
CGACGATGAAGAAGTGCGGT+TGG | 0.543666 | 4_2:+52177449 | Msa0606080:CDS |
CTTTAGCACTTACTAGCAAG+AGG | 0.547021 | 4_2:-52178700 | None:intergenic |
ACCGTTCTTGACAAGATTAG+CGG | 0.547122 | 4_2:-52178677 | None:intergenic |
CTTCATCGTCGACCACCTGT+CGG | 0.547560 | 4_2:-52177437 | None:intergenic |
AGTACAACCGGTGCACTTGA+AGG | 0.552820 | 4_2:+52177924 | Msa0606080:CDS |
AAACTCCCTCGGAGTAAGAT+CGG | 0.553683 | 4_2:-52177634 | None:intergenic |
TTCTTCGCGCATCACCCCAC+CGG | 0.555594 | 4_2:-52178545 | None:intergenic |
CATCAGACCACCATTGCACC+CGG | 0.562811 | 4_2:-52178494 | None:intergenic |
CTATTCGCCTATTAGGATGA+AGG | 0.564118 | 4_2:+52178926 | Msa0606080:CDS |
AGAAGATCCAATAATCCGAC+AGG | 0.566385 | 4_2:+52177422 | Msa0606080:CDS |
TGCTCAAAGAGACTAGATCA+TGG | 0.566764 | 4_2:+52178873 | Msa0606080:CDS |
TGATCCATGACTTGAGGATG+TGG | 0.567353 | 4_2:-52177330 | None:intergenic |
GTCTCTTTGAGCATATGTAT+GGG | 0.587803 | 4_2:-52178863 | None:intergenic |
ATTTAAACATAAGTTTGGGA+AGG | 0.587990 | 4_2:+52177494 | Msa0606080:CDS |
GCCGCTAATCTTGTCAAGAA+CGG | 0.589186 | 4_2:+52178676 | Msa0606080:CDS |
GTGAGCACCTTCAAGTGCAC+CGG | 0.592969 | 4_2:-52177931 | None:intergenic |
AACTCATGGGGTGAGACTTG+GGG | 0.593059 | 4_2:+52178972 | Msa0606080:CDS |
ACTTGTCGATTGTGATCATG+AGG | 0.595475 | 4_2:+52177995 | Msa0606080:CDS |
TGGATACTACAAAATATGCA+GGG | 0.599253 | 4_2:+52179001 | Msa0606080:CDS |
GTATATATGCAAACATACAT+TGG | 0.601664 | 4_2:+52178828 | Msa0606080:CDS |
TGTGATGCCGGGTGCAATGG+TGG | 0.601772 | 4_2:+52178487 | Msa0606080:CDS |
TATATGCGGAGTGGACTCCA+TGG | 0.603926 | 4_2:+52179031 | Msa0606080:CDS |
ACGCTCTGACGAAACTCCCT+CGG | 0.605558 | 4_2:-52177645 | None:intergenic |
ATTCTCCGATCTTACTCCGA+GGG | 0.607597 | 4_2:+52177629 | Msa0606080:CDS |
CACCCGGCATCACAAGAACC+CGG | 0.609271 | 4_2:-52178478 | None:intergenic |
TATATGCAAACATACATTGG+AGG | 0.612222 | 4_2:+52178831 | Msa0606080:CDS |
CGGCGTAGAGAATGCCGAGA+CGG | 0.623788 | 4_2:-52177391 | None:intergenic |
CTACTGAGTAGTAGTATGAA+CGG | 0.624053 | 4_2:-52179069 | None:intergenic |
GGACTCCATGGTTTCTACTG+TGG | 0.626354 | 4_2:+52179043 | Msa0606080:CDS |
TCGCAGAATAGAATGGAAAG+TGG | 0.626877 | 4_2:-52177303 | None:intergenic |
TCCTCCGGAAGATTATCTGT+CGG | 0.627162 | 4_2:-52177723 | None:intergenic |
TCAATTGATGGATCCTTCGG+CGG | 0.633662 | 4_2:+52177590 | Msa0606080:CDS |
GATCATGGAGTGTTACTGGT+GGG | 0.636411 | 4_2:+52178888 | Msa0606080:CDS |
GTAACACCGTGAACCGCCGA+AGG | 0.638844 | 4_2:-52177603 | None:intergenic |
TAGTGTGATCCAGAGCAACC+GGG | 0.639888 | 4_2:+52178460 | Msa0606080:intron |
AGGGCTCGTGTGGATCATGT+TGG | 0.640660 | 4_2:+52177895 | Msa0606080:intron |
GCATTCTCTACGCCGGACGA+AGG | 0.643570 | 4_2:+52177399 | Msa0606080:CDS |
ATCATGAATTAGGGCTCGTG+TGG | 0.646039 | 4_2:+52177885 | Msa0606080:intron |
TCCGACAGATAATCTTCCGG+AGG | 0.646681 | 4_2:+52177722 | Msa0606080:CDS |
GTGCGATGATCCATGACTTG+AGG | 0.654706 | 4_2:-52177336 | None:intergenic |
GGCAGCCACAGTAGAAACCA+TGG | 0.655273 | 4_2:-52179048 | None:intergenic |
CGTCTCGGCATTCTCTACGC+CGG | 0.661935 | 4_2:+52177392 | Msa0606080:CDS |
AGATCATGGAGTGTTACTGG+TGG | 0.667806 | 4_2:+52178887 | Msa0606080:CDS |
ATTATCTGTCGGAAGAATCG+GGG | 0.668335 | 4_2:-52177712 | None:intergenic |
GGATACTACAAAATATGCAG+GGG | 0.670950 | 4_2:+52179002 | Msa0606080:CDS |
AGATCCAATAATCCGACAGG+TGG | 0.675027 | 4_2:+52177425 | Msa0606080:CDS |
TGCAGGGGACGAAATATATG+CGG | 0.679393 | 4_2:+52179017 | Msa0606080:CDS |
GGGACGAAATATATGCGGAG+TGG | 0.687467 | 4_2:+52179022 | Msa0606080:CDS |
AATTCTCCGATCTTACTCCG+AGG | 0.702571 | 4_2:+52177628 | Msa0606080:CDS |
TGGTCGACGATGAAGAAGTG+CGG | 0.727360 | 4_2:+52177445 | Msa0606080:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTATATGTTATCTAAAT+TGG | + | chr4_2:52178412-52178431 | Msa0606080:intron | 10.0% |
!!! | ATATGATTCTATTTTAAAAA+TGG | + | chr4_2:52179298-52179317 | Msa0606080:three_prime_UTR | 10.0% |
!!! | TATGATTCTATTTTAAAAAT+GGG | + | chr4_2:52179299-52179318 | Msa0606080:three_prime_UTR | 10.0% |
!! | TTATTATATGTTATCTAAAT+TGG | + | chr4_2:52178412-52178431 | Msa0606080:intron | 10.0% |
!!! | ATATGATTCTATTTTAAAAA+TGG | + | chr4_2:52179298-52179317 | Msa0606080:three_prime_UTR | 10.0% |
!!! | TATGATTCTATTTTAAAAAT+GGG | + | chr4_2:52179299-52179318 | Msa0606080:three_prime_UTR | 10.0% |
!!! | GAGTTTTATTTTATATATAG+AGG | - | chr4_2:52177280-52177299 | None:intergenic | 15.0% |
!! | GATATACTATTAATTACAAA+GGG | - | chr4_2:52178043-52178062 | None:intergenic | 15.0% |
!! | AGATATACTATTAATTACAA+AGG | - | chr4_2:52178044-52178063 | None:intergenic | 15.0% |
!! | ATCTTTACAGAATTATTTAT+TGG | + | chr4_2:52178346-52178365 | Msa0606080:intron | 15.0% |
!! | TCTTTACAGAATTATTTATT+GGG | + | chr4_2:52178347-52178366 | Msa0606080:intron | 15.0% |
!!! | GAGTTTTATTTTATATATAG+AGG | - | chr4_2:52177280-52177299 | None:intergenic | 15.0% |
!! | GATATACTATTAATTACAAA+GGG | - | chr4_2:52178043-52178062 | None:intergenic | 15.0% |
!! | AGATATACTATTAATTACAA+AGG | - | chr4_2:52178044-52178063 | None:intergenic | 15.0% |
!! | ATCTTTACAGAATTATTTAT+TGG | + | chr4_2:52178346-52178365 | Msa0606080:intron | 15.0% |
!! | TCTTTACAGAATTATTTATT+GGG | + | chr4_2:52178347-52178366 | Msa0606080:intron | 15.0% |
!! | AACCTATTTAAACATAAGTT+TGG | + | chr4_2:52177489-52177508 | Msa0606080:CDS | 20.0% |
!! | ACCTATTTAAACATAAGTTT+GGG | + | chr4_2:52177490-52177509 | Msa0606080:CDS | 20.0% |
!!! | AAAACAAATTTTGATTGTGT+TGG | + | chr4_2:52177855-52177874 | Msa0606080:intron | 20.0% |
!!! | AAACAAATTTTGATTGTGTT+GGG | + | chr4_2:52177856-52177875 | Msa0606080:intron | 20.0% |
!! | ATTAATTACAAAGGGAAAAT+AGG | - | chr4_2:52178035-52178054 | None:intergenic | 20.0% |
!! | AATTAATAGTATATCTGCTA+AGG | + | chr4_2:52178048-52178067 | Msa0606080:intron | 20.0% |
!! | TATCTGATATTAATCTTTCT+AGG | + | chr4_2:52178125-52178144 | Msa0606080:intron | 20.0% |
!! | ATACAATATCTAATAGAGTT+TGG | - | chr4_2:52178181-52178200 | None:intergenic | 20.0% |
!!! | AAATGCTAACTTGTAATATT+TGG | + | chr4_2:52178370-52178389 | Msa0606080:intron | 20.0% |
!!! | AATGCTAACTTGTAATATTT+GGG | + | chr4_2:52178371-52178390 | Msa0606080:intron | 20.0% |
!! | ATATGTTATCTAAATTGGTT+TGG | + | chr4_2:52178417-52178436 | Msa0606080:intron | 20.0% |
!!! | TTTGAGTACATTTTAAAATC+CGG | + | chr4_2:52178526-52178545 | Msa0606080:CDS | 20.0% |
!!! | GAGTTTTTAATTATCCAATA+TGG | - | chr4_2:52178957-52178976 | None:intergenic | 20.0% |
!! | ATTGGATAATTAAAAACTCA+TGG | + | chr4_2:52178958-52178977 | Msa0606080:CDS | 20.0% |
!! | TTGGATAATTAAAAACTCAT+GGG | + | chr4_2:52178959-52178978 | Msa0606080:CDS | 20.0% |
!!! | CTGTTGTTTATTTTATATTG+TGG | + | chr4_2:52179119-52179138 | Msa0606080:three_prime_UTR | 20.0% |
!! | AACAACAATTTATAGATGTA+TGG | + | chr4_2:52179246-52179265 | Msa0606080:three_prime_UTR | 20.0% |
!! | AACCTATTTAAACATAAGTT+TGG | + | chr4_2:52177489-52177508 | Msa0606080:CDS | 20.0% |
!! | ACCTATTTAAACATAAGTTT+GGG | + | chr4_2:52177490-52177509 | Msa0606080:CDS | 20.0% |
!!! | AAAACAAATTTTGATTGTGT+TGG | + | chr4_2:52177855-52177874 | Msa0606080:intron | 20.0% |
!!! | AAACAAATTTTGATTGTGTT+GGG | + | chr4_2:52177856-52177875 | Msa0606080:intron | 20.0% |
!! | ATTAATTACAAAGGGAAAAT+AGG | - | chr4_2:52178035-52178054 | None:intergenic | 20.0% |
!! | AATTAATAGTATATCTGCTA+AGG | + | chr4_2:52178048-52178067 | Msa0606080:intron | 20.0% |
!! | TATCTGATATTAATCTTTCT+AGG | + | chr4_2:52178125-52178144 | Msa0606080:intron | 20.0% |
!! | ATACAATATCTAATAGAGTT+TGG | - | chr4_2:52178181-52178200 | None:intergenic | 20.0% |
!!! | AAATGCTAACTTGTAATATT+TGG | + | chr4_2:52178370-52178389 | Msa0606080:intron | 20.0% |
!!! | AATGCTAACTTGTAATATTT+GGG | + | chr4_2:52178371-52178390 | Msa0606080:intron | 20.0% |
!! | ATATGTTATCTAAATTGGTT+TGG | + | chr4_2:52178417-52178436 | Msa0606080:intron | 20.0% |
!!! | TTTGAGTACATTTTAAAATC+CGG | + | chr4_2:52178526-52178545 | Msa0606080:CDS | 20.0% |
!!! | GAGTTTTTAATTATCCAATA+TGG | - | chr4_2:52178957-52178976 | None:intergenic | 20.0% |
!! | ATTGGATAATTAAAAACTCA+TGG | + | chr4_2:52178958-52178977 | Msa0606080:CDS | 20.0% |
!! | TTGGATAATTAAAAACTCAT+GGG | + | chr4_2:52178959-52178978 | Msa0606080:CDS | 20.0% |
!!! | CTGTTGTTTATTTTATATTG+TGG | + | chr4_2:52179119-52179138 | Msa0606080:three_prime_UTR | 20.0% |
!! | AACAACAATTTATAGATGTA+TGG | + | chr4_2:52179246-52179265 | Msa0606080:three_prime_UTR | 20.0% |
! | TCCCAAACTTATGTTTAAAT+AGG | - | chr4_2:52177494-52177513 | None:intergenic | 25.0% |
! | ATTTAAACATAAGTTTGGGA+AGG | + | chr4_2:52177494-52177513 | Msa0606080:CDS | 25.0% |
! | ACTCTATTAGATATTGTATG+AGG | + | chr4_2:52178182-52178201 | Msa0606080:intron | 25.0% |
!! | AGCAAATTTGAAACATGATT+AGG | + | chr4_2:52178278-52178297 | Msa0606080:intron | 25.0% |
!! | ATGCTAACTTGTAATATTTG+GGG | + | chr4_2:52178372-52178391 | Msa0606080:intron | 25.0% |
!!! | TTATCTAAATTGGTTTGGAT+TGG | + | chr4_2:52178422-52178441 | Msa0606080:intron | 25.0% |
! | TTGCATATATACTGCATTTA+AGG | - | chr4_2:52178820-52178839 | None:intergenic | 25.0% |
! | GTATATATGCAAACATACAT+TGG | + | chr4_2:52178828-52178847 | Msa0606080:CDS | 25.0% |
! | TGGATAATTAAAAACTCATG+GGG | + | chr4_2:52178960-52178979 | Msa0606080:CDS | 25.0% |
! | CCACATTAAAATATGAATAC+TGG | - | chr4_2:52179162-52179181 | None:intergenic | 25.0% |
!!! | CCAGTATTCATATTTTAATG+TGG | + | chr4_2:52179159-52179178 | Msa0606080:three_prime_UTR | 25.0% |
! | ACTAGATTAAGATTGAATTG+AGG | - | chr4_2:52177215-52177234 | None:intergenic | 25.0% |
! | TCCCAAACTTATGTTTAAAT+AGG | - | chr4_2:52177494-52177513 | None:intergenic | 25.0% |
! | ATTTAAACATAAGTTTGGGA+AGG | + | chr4_2:52177494-52177513 | Msa0606080:CDS | 25.0% |
! | ACTCTATTAGATATTGTATG+AGG | + | chr4_2:52178182-52178201 | Msa0606080:intron | 25.0% |
!! | AGCAAATTTGAAACATGATT+AGG | + | chr4_2:52178278-52178297 | Msa0606080:intron | 25.0% |
!! | ATGCTAACTTGTAATATTTG+GGG | + | chr4_2:52178372-52178391 | Msa0606080:intron | 25.0% |
!!! | TTATCTAAATTGGTTTGGAT+TGG | + | chr4_2:52178422-52178441 | Msa0606080:intron | 25.0% |
! | TTGCATATATACTGCATTTA+AGG | - | chr4_2:52178820-52178839 | None:intergenic | 25.0% |
! | GTATATATGCAAACATACAT+TGG | + | chr4_2:52178828-52178847 | Msa0606080:CDS | 25.0% |
! | TGGATAATTAAAAACTCATG+GGG | + | chr4_2:52178960-52178979 | Msa0606080:CDS | 25.0% |
! | CCACATTAAAATATGAATAC+TGG | - | chr4_2:52179162-52179181 | None:intergenic | 25.0% |
!!! | CCAGTATTCATATTTTAATG+TGG | + | chr4_2:52179159-52179178 | Msa0606080:three_prime_UTR | 25.0% |
ATATATAGAGGTTGCAATTG+CGG | - | chr4_2:52177268-52177287 | None:intergenic | 30.0% | |
AGTTACTGCTGTTAAAAATC+AGG | + | chr4_2:52177770-52177789 | Msa0606080:CDS | 30.0% | |
!!! | AGTACATTTTAAAATCCGGT+GGG | + | chr4_2:52178530-52178549 | Msa0606080:CDS | 30.0% |
TATATGCAAACATACATTGG+AGG | + | chr4_2:52178831-52178850 | Msa0606080:CDS | 30.0% | |
ATGGATACTACAAAATATGC+AGG | + | chr4_2:52179000-52179019 | Msa0606080:CDS | 30.0% | |
TGGATACTACAAAATATGCA+GGG | + | chr4_2:52179001-52179020 | Msa0606080:CDS | 30.0% | |
!!! | TTCATATTTTAATGTGGTGC+TGG | + | chr4_2:52179165-52179184 | Msa0606080:three_prime_UTR | 30.0% |
ATATATAGAGGTTGCAATTG+CGG | - | chr4_2:52177268-52177287 | None:intergenic | 30.0% | |
AGTTACTGCTGTTAAAAATC+AGG | + | chr4_2:52177770-52177789 | Msa0606080:CDS | 30.0% | |
!!! | AGTACATTTTAAAATCCGGT+GGG | + | chr4_2:52178530-52178549 | Msa0606080:CDS | 30.0% |
TATATGCAAACATACATTGG+AGG | + | chr4_2:52178831-52178850 | Msa0606080:CDS | 30.0% | |
ATGGATACTACAAAATATGC+AGG | + | chr4_2:52179000-52179019 | Msa0606080:CDS | 30.0% | |
TGGATACTACAAAATATGCA+GGG | + | chr4_2:52179001-52179020 | Msa0606080:CDS | 30.0% | |
!!! | TTCATATTTTAATGTGGTGC+TGG | + | chr4_2:52179165-52179184 | Msa0606080:three_prime_UTR | 30.0% |
TGGAAAATCGCAGAATAGAA+TGG | - | chr4_2:52177313-52177332 | None:intergenic | 35.0% | |
TCAATTGATGCTTCTTAGCA+CGG | - | chr4_2:52177578-52177597 | None:intergenic | 35.0% | |
!! | TGCTAAGAAGCATCAATTGA+TGG | + | chr4_2:52177578-52177597 | Msa0606080:CDS | 35.0% |
AGATTATCTGTCGGAAGAAT+CGG | - | chr4_2:52177717-52177736 | None:intergenic | 35.0% | |
!!! | GATTTTGATTGGAGAGAGAA+AGG | + | chr4_2:52177744-52177763 | Msa0606080:CDS | 35.0% |
TGGGTTTGTGATCATGAATT+AGG | + | chr4_2:52177875-52177894 | Msa0606080:intron | 35.0% | |
GGGTTTGTGATCATGAATTA+GGG | + | chr4_2:52177876-52177895 | Msa0606080:intron | 35.0% | |
ATTGTATGAGGTTCGACTTA+AGG | + | chr4_2:52178194-52178213 | Msa0606080:intron | 35.0% | |
!!! | GAGTACATTTTAAAATCCGG+TGG | + | chr4_2:52178529-52178548 | Msa0606080:CDS | 35.0% |
!!! | GTACATTTTAAAATCCGGTG+GGG | + | chr4_2:52178531-52178550 | Msa0606080:CDS | 35.0% |
GAAGAAGACTATCCTTATTC+TGG | + | chr4_2:52178562-52178581 | Msa0606080:CDS | 35.0% | |
GTCTCTTTGAGCATATGTAT+GGG | - | chr4_2:52178866-52178885 | None:intergenic | 35.0% | |
AGTCTCTTTGAGCATATGTA+TGG | - | chr4_2:52178867-52178886 | None:intergenic | 35.0% | |
GGATACTACAAAATATGCAG+GGG | + | chr4_2:52179002-52179021 | Msa0606080:CDS | 35.0% | |
CTACTGAGTAGTAGTATGAA+CGG | - | chr4_2:52179072-52179091 | None:intergenic | 35.0% | |
TGAATACTGGCAACAATTCA+TGG | - | chr4_2:52179149-52179168 | None:intergenic | 35.0% | |
TGGAAAATCGCAGAATAGAA+TGG | - | chr4_2:52177313-52177332 | None:intergenic | 35.0% | |
TCAATTGATGCTTCTTAGCA+CGG | - | chr4_2:52177578-52177597 | None:intergenic | 35.0% | |
!! | TGCTAAGAAGCATCAATTGA+TGG | + | chr4_2:52177578-52177597 | Msa0606080:CDS | 35.0% |
AGATTATCTGTCGGAAGAAT+CGG | - | chr4_2:52177717-52177736 | None:intergenic | 35.0% | |
!!! | GATTTTGATTGGAGAGAGAA+AGG | + | chr4_2:52177744-52177763 | Msa0606080:CDS | 35.0% |
TGGGTTTGTGATCATGAATT+AGG | + | chr4_2:52177875-52177894 | Msa0606080:intron | 35.0% | |
GGGTTTGTGATCATGAATTA+GGG | + | chr4_2:52177876-52177895 | Msa0606080:intron | 35.0% | |
ATTGTATGAGGTTCGACTTA+AGG | + | chr4_2:52178194-52178213 | Msa0606080:intron | 35.0% | |
!!! | GAGTACATTTTAAAATCCGG+TGG | + | chr4_2:52178529-52178548 | Msa0606080:CDS | 35.0% |
!!! | GTACATTTTAAAATCCGGTG+GGG | + | chr4_2:52178531-52178550 | Msa0606080:CDS | 35.0% |
GAAGAAGACTATCCTTATTC+TGG | + | chr4_2:52178562-52178581 | Msa0606080:CDS | 35.0% | |
GTCTCTTTGAGCATATGTAT+GGG | - | chr4_2:52178866-52178885 | None:intergenic | 35.0% | |
AGTCTCTTTGAGCATATGTA+TGG | - | chr4_2:52178867-52178886 | None:intergenic | 35.0% | |
GGATACTACAAAATATGCAG+GGG | + | chr4_2:52179002-52179021 | Msa0606080:CDS | 35.0% | |
CTACTGAGTAGTAGTATGAA+CGG | - | chr4_2:52179072-52179091 | None:intergenic | 35.0% | |
TGAATACTGGCAACAATTCA+TGG | - | chr4_2:52179149-52179168 | None:intergenic | 35.0% | |
TCGCAGAATAGAATGGAAAG+TGG | - | chr4_2:52177306-52177325 | None:intergenic | 40.0% | |
! | TTTTCCACATCCTCAAGTCA+TGG | + | chr4_2:52177326-52177345 | Msa0606080:exon | 40.0% |
! | TCTTTTCATCTTCTCCGTCT+CGG | + | chr4_2:52177377-52177396 | Msa0606080:CDS | 40.0% |
AGAAGATCCAATAATCCGAC+AGG | + | chr4_2:52177422-52177441 | Msa0606080:CDS | 40.0% | |
TGGGAAGGTTTATTCTTCCA+AGG | + | chr4_2:52177509-52177528 | Msa0606080:CDS | 40.0% | |
CCTGTAATCATGTTCATCCT+TGG | - | chr4_2:52177529-52177548 | None:intergenic | 40.0% | |
CCAAGGATGAACATGATTAC+AGG | + | chr4_2:52177526-52177545 | Msa0606080:CDS | 40.0% | |
! | GCATCAATTGATGGATCCTT+CGG | + | chr4_2:52177587-52177606 | Msa0606080:CDS | 40.0% |
ATTATCTGTCGGAAGAATCG+GGG | - | chr4_2:52177715-52177734 | None:intergenic | 40.0% | |
GATTATCTGTCGGAAGAATC+GGG | - | chr4_2:52177716-52177735 | None:intergenic | 40.0% | |
TCTTCCGACAGATAATCTTC+CGG | + | chr4_2:52177719-52177738 | Msa0606080:CDS | 40.0% | |
!! | ATCTTCCGGAGGATTTTGAT+TGG | + | chr4_2:52177733-52177752 | Msa0606080:CDS | 40.0% |
TCTCTCCAATCAAAATCCTC+CGG | - | chr4_2:52177741-52177760 | None:intergenic | 40.0% | |
TGTTGGAGTTTCAGTACAAC+CGG | + | chr4_2:52177912-52177931 | Msa0606080:CDS | 40.0% | |
! | GCTAAGACTGACAAGTTTTC+CGG | - | chr4_2:52177967-52177986 | None:intergenic | 40.0% |
! | ACTTGTCGATTGTGATCATG+AGG | + | chr4_2:52177995-52178014 | Msa0606080:CDS | 40.0% |
ACCGTTCTTGACAAGATTAG+CGG | - | chr4_2:52178680-52178699 | None:intergenic | 40.0% | |
CTTTAGCACTTACTAGCAAG+AGG | - | chr4_2:52178703-52178722 | None:intergenic | 40.0% | |
TGCTCAAAGAGACTAGATCA+TGG | + | chr4_2:52178873-52178892 | Msa0606080:CDS | 40.0% | |
! | ACTAGATCATGGAGTGTTAC+TGG | + | chr4_2:52178884-52178903 | Msa0606080:CDS | 40.0% |
CTTCATCCTAATAGGCGAAT+AGG | - | chr4_2:52178928-52178947 | None:intergenic | 40.0% | |
CTATTCGCCTATTAGGATGA+AGG | + | chr4_2:52178926-52178945 | Msa0606080:CDS | 40.0% | |
TCGCAGAATAGAATGGAAAG+TGG | - | chr4_2:52177306-52177325 | None:intergenic | 40.0% | |
! | TTTTCCACATCCTCAAGTCA+TGG | + | chr4_2:52177326-52177345 | Msa0606080:exon | 40.0% |
! | TCTTTTCATCTTCTCCGTCT+CGG | + | chr4_2:52177377-52177396 | Msa0606080:CDS | 40.0% |
AGAAGATCCAATAATCCGAC+AGG | + | chr4_2:52177422-52177441 | Msa0606080:CDS | 40.0% | |
TGGGAAGGTTTATTCTTCCA+AGG | + | chr4_2:52177509-52177528 | Msa0606080:CDS | 40.0% | |
CCTGTAATCATGTTCATCCT+TGG | - | chr4_2:52177529-52177548 | None:intergenic | 40.0% | |
CCAAGGATGAACATGATTAC+AGG | + | chr4_2:52177526-52177545 | Msa0606080:CDS | 40.0% | |
! | GCATCAATTGATGGATCCTT+CGG | + | chr4_2:52177587-52177606 | Msa0606080:CDS | 40.0% |
ATTATCTGTCGGAAGAATCG+GGG | - | chr4_2:52177715-52177734 | None:intergenic | 40.0% | |
GATTATCTGTCGGAAGAATC+GGG | - | chr4_2:52177716-52177735 | None:intergenic | 40.0% | |
TCTTCCGACAGATAATCTTC+CGG | + | chr4_2:52177719-52177738 | Msa0606080:CDS | 40.0% | |
!! | ATCTTCCGGAGGATTTTGAT+TGG | + | chr4_2:52177733-52177752 | Msa0606080:CDS | 40.0% |
TCTCTCCAATCAAAATCCTC+CGG | - | chr4_2:52177741-52177760 | None:intergenic | 40.0% | |
TGTTGGAGTTTCAGTACAAC+CGG | + | chr4_2:52177912-52177931 | Msa0606080:CDS | 40.0% | |
! | GCTAAGACTGACAAGTTTTC+CGG | - | chr4_2:52177967-52177986 | None:intergenic | 40.0% |
! | ACTTGTCGATTGTGATCATG+AGG | + | chr4_2:52177995-52178014 | Msa0606080:CDS | 40.0% |
ACCGTTCTTGACAAGATTAG+CGG | - | chr4_2:52178680-52178699 | None:intergenic | 40.0% | |
CTTTAGCACTTACTAGCAAG+AGG | - | chr4_2:52178703-52178722 | None:intergenic | 40.0% | |
TGCTCAAAGAGACTAGATCA+TGG | + | chr4_2:52178873-52178892 | Msa0606080:CDS | 40.0% | |
! | ACTAGATCATGGAGTGTTAC+TGG | + | chr4_2:52178884-52178903 | Msa0606080:CDS | 40.0% |
CTTCATCCTAATAGGCGAAT+AGG | - | chr4_2:52178928-52178947 | None:intergenic | 40.0% | |
CTATTCGCCTATTAGGATGA+AGG | + | chr4_2:52178926-52178945 | Msa0606080:CDS | 40.0% | |
GGTTGCAATTGCGGTAAGTA+AGG | - | chr4_2:52177259-52177278 | None:intergenic | 45.0% | |
TGATCCATGACTTGAGGATG+TGG | - | chr4_2:52177333-52177352 | None:intergenic | 45.0% | |
ATTGGATCTTCTCCTTCGTC+CGG | - | chr4_2:52177414-52177433 | None:intergenic | 45.0% | |
AGATCCAATAATCCGACAGG+TGG | + | chr4_2:52177425-52177444 | Msa0606080:CDS | 45.0% | |
! | TCAATTGATGGATCCTTCGG+CGG | + | chr4_2:52177590-52177609 | Msa0606080:CDS | 45.0% |
AATTCTCCGATCTTACTCCG+AGG | + | chr4_2:52177628-52177647 | Msa0606080:CDS | 45.0% | |
ATTCTCCGATCTTACTCCGA+GGG | + | chr4_2:52177629-52177648 | Msa0606080:CDS | 45.0% | |
AAACTCCCTCGGAGTAAGAT+CGG | - | chr4_2:52177637-52177656 | None:intergenic | 45.0% | |
!! | GAGTTTCGTCAGAGCGTTTT+GGG | + | chr4_2:52177651-52177670 | Msa0606080:CDS | 45.0% |
!!! | AGAGCGTTTTGGGATTGAGA+GGG | + | chr4_2:52177661-52177680 | Msa0606080:CDS | 45.0% |
TCCTCCGGAAGATTATCTGT+CGG | - | chr4_2:52177726-52177745 | None:intergenic | 45.0% | |
ATCATGAATTAGGGCTCGTG+TGG | + | chr4_2:52177885-52177904 | Msa0606080:intron | 45.0% | |
! | GCACATCGATAGTGACTTGT+AGG | + | chr4_2:52178230-52178249 | Msa0606080:intron | 45.0% |
ATAGTGTGATCCAGAGCAAC+CGG | + | chr4_2:52178459-52178478 | Msa0606080:intron | 45.0% | |
CCACGATCAGTACCAGAATA+AGG | - | chr4_2:52178577-52178596 | None:intergenic | 45.0% | |
!! | CCTTATTCTGGTACTGATCG+TGG | + | chr4_2:52178574-52178593 | Msa0606080:CDS | 45.0% |
TGACAAGATTAGCGGCAATC+TGG | - | chr4_2:52178672-52178691 | None:intergenic | 45.0% | |
GCCGCTAATCTTGTCAAGAA+CGG | + | chr4_2:52178676-52178695 | Msa0606080:CDS | 45.0% | |
! | AGATCATGGAGTGTTACTGG+TGG | + | chr4_2:52178887-52178906 | Msa0606080:CDS | 45.0% |
! | GATCATGGAGTGTTACTGGT+GGG | + | chr4_2:52178888-52178907 | Msa0606080:CDS | 45.0% |
TTACTGGTGGGATATGGATC+TGG | + | chr4_2:52178900-52178919 | Msa0606080:CDS | 45.0% | |
GGCTTCTCCTTCATCCTAAT+AGG | - | chr4_2:52178936-52178955 | None:intergenic | 45.0% | |
GGATGAAGGAGAAGCCATAT+TGG | + | chr4_2:52178940-52178959 | Msa0606080:CDS | 45.0% | |
AAAACTCATGGGGTGAGACT+TGG | + | chr4_2:52178970-52178989 | Msa0606080:CDS | 45.0% | |
AAACTCATGGGGTGAGACTT+GGG | + | chr4_2:52178971-52178990 | Msa0606080:CDS | 45.0% | |
TGCAGGGGACGAAATATATG+CGG | + | chr4_2:52179017-52179036 | Msa0606080:CDS | 45.0% | |
GGTTGCAATTGCGGTAAGTA+AGG | - | chr4_2:52177259-52177278 | None:intergenic | 45.0% | |
TGATCCATGACTTGAGGATG+TGG | - | chr4_2:52177333-52177352 | None:intergenic | 45.0% | |
ATTGGATCTTCTCCTTCGTC+CGG | - | chr4_2:52177414-52177433 | None:intergenic | 45.0% | |
AGATCCAATAATCCGACAGG+TGG | + | chr4_2:52177425-52177444 | Msa0606080:CDS | 45.0% | |
! | TCAATTGATGGATCCTTCGG+CGG | + | chr4_2:52177590-52177609 | Msa0606080:CDS | 45.0% |
AATTCTCCGATCTTACTCCG+AGG | + | chr4_2:52177628-52177647 | Msa0606080:CDS | 45.0% | |
ATTCTCCGATCTTACTCCGA+GGG | + | chr4_2:52177629-52177648 | Msa0606080:CDS | 45.0% | |
AAACTCCCTCGGAGTAAGAT+CGG | - | chr4_2:52177637-52177656 | None:intergenic | 45.0% | |
!! | GAGTTTCGTCAGAGCGTTTT+GGG | + | chr4_2:52177651-52177670 | Msa0606080:CDS | 45.0% |
!!! | AGAGCGTTTTGGGATTGAGA+GGG | + | chr4_2:52177661-52177680 | Msa0606080:CDS | 45.0% |
TCCTCCGGAAGATTATCTGT+CGG | - | chr4_2:52177726-52177745 | None:intergenic | 45.0% | |
ATCATGAATTAGGGCTCGTG+TGG | + | chr4_2:52177885-52177904 | Msa0606080:intron | 45.0% | |
! | GCACATCGATAGTGACTTGT+AGG | + | chr4_2:52178230-52178249 | Msa0606080:intron | 45.0% |
ATAGTGTGATCCAGAGCAAC+CGG | + | chr4_2:52178459-52178478 | Msa0606080:intron | 45.0% | |
CCACGATCAGTACCAGAATA+AGG | - | chr4_2:52178577-52178596 | None:intergenic | 45.0% | |
!! | CCTTATTCTGGTACTGATCG+TGG | + | chr4_2:52178574-52178593 | Msa0606080:CDS | 45.0% |
TGACAAGATTAGCGGCAATC+TGG | - | chr4_2:52178672-52178691 | None:intergenic | 45.0% | |
GCCGCTAATCTTGTCAAGAA+CGG | + | chr4_2:52178676-52178695 | Msa0606080:CDS | 45.0% | |
! | AGATCATGGAGTGTTACTGG+TGG | + | chr4_2:52178887-52178906 | Msa0606080:CDS | 45.0% |
! | GATCATGGAGTGTTACTGGT+GGG | + | chr4_2:52178888-52178907 | Msa0606080:CDS | 45.0% |
TTACTGGTGGGATATGGATC+TGG | + | chr4_2:52178900-52178919 | Msa0606080:CDS | 45.0% | |
GGCTTCTCCTTCATCCTAAT+AGG | - | chr4_2:52178936-52178955 | None:intergenic | 45.0% | |
GGATGAAGGAGAAGCCATAT+TGG | + | chr4_2:52178940-52178959 | Msa0606080:CDS | 45.0% | |
AAAACTCATGGGGTGAGACT+TGG | + | chr4_2:52178970-52178989 | Msa0606080:CDS | 45.0% | |
AAACTCATGGGGTGAGACTT+GGG | + | chr4_2:52178971-52178990 | Msa0606080:CDS | 45.0% | |
TGCAGGGGACGAAATATATG+CGG | + | chr4_2:52179017-52179036 | Msa0606080:CDS | 45.0% | |
GTGCGATGATCCATGACTTG+AGG | - | chr4_2:52177339-52177358 | None:intergenic | 50.0% | |
TCGACCACCTGTCGGATTAT+TGG | - | chr4_2:52177432-52177451 | None:intergenic | 50.0% | |
TGGTCGACGATGAAGAAGTG+CGG | + | chr4_2:52177445-52177464 | Msa0606080:CDS | 50.0% | |
! | GACGATGAAGAAGTGCGGTT+GGG | + | chr4_2:52177450-52177469 | Msa0606080:CDS | 50.0% |
!! | GGAGTTTCGTCAGAGCGTTT+TGG | + | chr4_2:52177650-52177669 | Msa0606080:CDS | 50.0% |
!!! | CAGAGCGTTTTGGGATTGAG+AGG | + | chr4_2:52177660-52177679 | Msa0606080:CDS | 50.0% |
!!! | GAGCGTTTTGGGATTGAGAG+GGG | + | chr4_2:52177662-52177681 | Msa0606080:CDS | 50.0% |
!!! | GTTTTGGGATTGAGAGGGGT+GGG | + | chr4_2:52177666-52177685 | Msa0606080:CDS | 50.0% |
!!! | TTTTGGGATTGAGAGGGGTG+GGG | + | chr4_2:52177667-52177686 | Msa0606080:CDS | 50.0% |
GGGGCTGCATTTGCATCTTT+CGG | - | chr4_2:52177696-52177715 | None:intergenic | 50.0% | |
TCCGACAGATAATCTTCCGG+AGG | + | chr4_2:52177722-52177741 | Msa0606080:CDS | 50.0% | |
AGTACAACCGGTGCACTTGA+AGG | + | chr4_2:52177924-52177943 | Msa0606080:CDS | 50.0% | |
TAGTGTGATCCAGAGCAACC+GGG | + | chr4_2:52178460-52178479 | Msa0606080:intron | 50.0% | |
! | GGAGTGTTACTGGTGGGATA+TGG | + | chr4_2:52178894-52178913 | Msa0606080:CDS | 50.0% |
CTGGAGCCTATTCGCCTATT+AGG | + | chr4_2:52178919-52178938 | Msa0606080:CDS | 50.0% | |
AACTCATGGGGTGAGACTTG+GGG | + | chr4_2:52178972-52178991 | Msa0606080:CDS | 50.0% | |
GGTGAGACTTGGGGAGAAAA+TGG | + | chr4_2:52178981-52179000 | Msa0606080:CDS | 50.0% | |
GGGACGAAATATATGCGGAG+TGG | + | chr4_2:52179022-52179041 | Msa0606080:CDS | 50.0% | |
! | TATATGCGGAGTGGACTCCA+TGG | + | chr4_2:52179031-52179050 | Msa0606080:CDS | 50.0% |
GGACTCCATGGTTTCTACTG+TGG | + | chr4_2:52179043-52179062 | Msa0606080:CDS | 50.0% | |
GTGCGATGATCCATGACTTG+AGG | - | chr4_2:52177339-52177358 | None:intergenic | 50.0% | |
TCGACCACCTGTCGGATTAT+TGG | - | chr4_2:52177432-52177451 | None:intergenic | 50.0% | |
TGGTCGACGATGAAGAAGTG+CGG | + | chr4_2:52177445-52177464 | Msa0606080:CDS | 50.0% | |
! | GACGATGAAGAAGTGCGGTT+GGG | + | chr4_2:52177450-52177469 | Msa0606080:CDS | 50.0% |
!! | GGAGTTTCGTCAGAGCGTTT+TGG | + | chr4_2:52177650-52177669 | Msa0606080:CDS | 50.0% |
!!! | CAGAGCGTTTTGGGATTGAG+AGG | + | chr4_2:52177660-52177679 | Msa0606080:CDS | 50.0% |
!!! | GAGCGTTTTGGGATTGAGAG+GGG | + | chr4_2:52177662-52177681 | Msa0606080:CDS | 50.0% |
!!! | GTTTTGGGATTGAGAGGGGT+GGG | + | chr4_2:52177666-52177685 | Msa0606080:CDS | 50.0% |
!!! | TTTTGGGATTGAGAGGGGTG+GGG | + | chr4_2:52177667-52177686 | Msa0606080:CDS | 50.0% |
GGGGCTGCATTTGCATCTTT+CGG | - | chr4_2:52177696-52177715 | None:intergenic | 50.0% | |
TCCGACAGATAATCTTCCGG+AGG | + | chr4_2:52177722-52177741 | Msa0606080:CDS | 50.0% | |
AGTACAACCGGTGCACTTGA+AGG | + | chr4_2:52177924-52177943 | Msa0606080:CDS | 50.0% | |
TAGTGTGATCCAGAGCAACC+GGG | + | chr4_2:52178460-52178479 | Msa0606080:intron | 50.0% | |
! | GGAGTGTTACTGGTGGGATA+TGG | + | chr4_2:52178894-52178913 | Msa0606080:CDS | 50.0% |
CTGGAGCCTATTCGCCTATT+AGG | + | chr4_2:52178919-52178938 | Msa0606080:CDS | 50.0% | |
AACTCATGGGGTGAGACTTG+GGG | + | chr4_2:52178972-52178991 | Msa0606080:CDS | 50.0% | |
GGTGAGACTTGGGGAGAAAA+TGG | + | chr4_2:52178981-52179000 | Msa0606080:CDS | 50.0% | |
GGGACGAAATATATGCGGAG+TGG | + | chr4_2:52179022-52179041 | Msa0606080:CDS | 50.0% | |
! | TATATGCGGAGTGGACTCCA+TGG | + | chr4_2:52179031-52179050 | Msa0606080:CDS | 50.0% |
GGACTCCATGGTTTCTACTG+TGG | + | chr4_2:52179043-52179062 | Msa0606080:CDS | 50.0% | |
CTTCATCGTCGACCACCTGT+CGG | - | chr4_2:52177440-52177459 | None:intergenic | 55.0% | |
! | CGACGATGAAGAAGTGCGGT+TGG | + | chr4_2:52177449-52177468 | Msa0606080:CDS | 55.0% |
ATGGATCCTTCGGCGGTTCA+CGG | + | chr4_2:52177597-52177616 | Msa0606080:CDS | 55.0% | |
ACGCTCTGACGAAACTCCCT+CGG | - | chr4_2:52177648-52177667 | None:intergenic | 55.0% | |
!!! | CGTTTTGGGATTGAGAGGGG+TGG | + | chr4_2:52177665-52177684 | Msa0606080:CDS | 55.0% |
AGGGCTCGTGTGGATCATGT+TGG | + | chr4_2:52177895-52177914 | Msa0606080:intron | 55.0% | |
GTGAGCACCTTCAAGTGCAC+CGG | - | chr4_2:52177934-52177953 | None:intergenic | 55.0% | |
GGTGCTCACTTTCTCTCGAC+CGG | + | chr4_2:52177945-52177964 | Msa0606080:CDS | 55.0% | |
TCACAAGAACCCGGTTGCTC+TGG | - | chr4_2:52178472-52178491 | None:intergenic | 55.0% | |
CAACCGGGTTCTTGTGATGC+CGG | + | chr4_2:52178475-52178494 | Msa0606080:CDS | 55.0% | |
AACCGGGTTCTTGTGATGCC+GGG | + | chr4_2:52178476-52178495 | Msa0606080:CDS | 55.0% | |
TCTTGTGATGCCGGGTGCAA+TGG | + | chr4_2:52178484-52178503 | Msa0606080:CDS | 55.0% | |
CATCAGACCACCATTGCACC+CGG | - | chr4_2:52178497-52178516 | None:intergenic | 55.0% | |
GGCAGCCACAGTAGAAACCA+TGG | - | chr4_2:52179051-52179070 | None:intergenic | 55.0% | |
CTTCATCGTCGACCACCTGT+CGG | - | chr4_2:52177440-52177459 | None:intergenic | 55.0% | |
! | CGACGATGAAGAAGTGCGGT+TGG | + | chr4_2:52177449-52177468 | Msa0606080:CDS | 55.0% |
ATGGATCCTTCGGCGGTTCA+CGG | + | chr4_2:52177597-52177616 | Msa0606080:CDS | 55.0% | |
ACGCTCTGACGAAACTCCCT+CGG | - | chr4_2:52177648-52177667 | None:intergenic | 55.0% | |
!!! | CGTTTTGGGATTGAGAGGGG+TGG | + | chr4_2:52177665-52177684 | Msa0606080:CDS | 55.0% |
AGGGCTCGTGTGGATCATGT+TGG | + | chr4_2:52177895-52177914 | Msa0606080:intron | 55.0% | |
GTGAGCACCTTCAAGTGCAC+CGG | - | chr4_2:52177934-52177953 | None:intergenic | 55.0% | |
GGTGCTCACTTTCTCTCGAC+CGG | + | chr4_2:52177945-52177964 | Msa0606080:CDS | 55.0% | |
TCACAAGAACCCGGTTGCTC+TGG | - | chr4_2:52178472-52178491 | None:intergenic | 55.0% | |
CAACCGGGTTCTTGTGATGC+CGG | + | chr4_2:52178475-52178494 | Msa0606080:CDS | 55.0% | |
AACCGGGTTCTTGTGATGCC+GGG | + | chr4_2:52178476-52178495 | Msa0606080:CDS | 55.0% | |
TCTTGTGATGCCGGGTGCAA+TGG | + | chr4_2:52178484-52178503 | Msa0606080:CDS | 55.0% | |
CATCAGACCACCATTGCACC+CGG | - | chr4_2:52178497-52178516 | None:intergenic | 55.0% | |
GGCAGCCACAGTAGAAACCA+TGG | - | chr4_2:52179051-52179070 | None:intergenic | 55.0% | |
CGGCGTAGAGAATGCCGAGA+CGG | - | chr4_2:52177394-52177413 | None:intergenic | 60.0% | |
CGTCTCGGCATTCTCTACGC+CGG | + | chr4_2:52177392-52177411 | Msa0606080:CDS | 60.0% | |
GCATTCTCTACGCCGGACGA+AGG | + | chr4_2:52177399-52177418 | Msa0606080:CDS | 60.0% | |
GTAACACCGTGAACCGCCGA+AGG | - | chr4_2:52177606-52177625 | None:intergenic | 60.0% | |
CACCCGGCATCACAAGAACC+CGG | - | chr4_2:52178481-52178500 | None:intergenic | 60.0% | |
TGTGATGCCGGGTGCAATGG+TGG | + | chr4_2:52178487-52178506 | Msa0606080:CDS | 60.0% | |
TTCTTCGCGCATCACCCCAC+CGG | - | chr4_2:52178548-52178567 | None:intergenic | 60.0% | |
CGGCGTAGAGAATGCCGAGA+CGG | - | chr4_2:52177394-52177413 | None:intergenic | 60.0% | |
CGTCTCGGCATTCTCTACGC+CGG | + | chr4_2:52177392-52177411 | Msa0606080:CDS | 60.0% | |
GCATTCTCTACGCCGGACGA+AGG | + | chr4_2:52177399-52177418 | Msa0606080:CDS | 60.0% | |
GTAACACCGTGAACCGCCGA+AGG | - | chr4_2:52177606-52177625 | None:intergenic | 60.0% | |
CACCCGGCATCACAAGAACC+CGG | - | chr4_2:52178481-52178500 | None:intergenic | 60.0% | |
TGTGATGCCGGGTGCAATGG+TGG | + | chr4_2:52178487-52178506 | Msa0606080:CDS | 60.0% | |
TTCTTCGCGCATCACCCCAC+CGG | - | chr4_2:52178548-52178567 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 52177213 | 52179323 | 52177213 | ID=Msa0606080;Name=Msa0606080 |
chr4_2 | mRNA | 52177213 | 52179323 | 52177213 | ID=Msa0606080-mRNA-1;Parent=Msa0606080;Name=Msa0606080-mRNA-1;_AED=0.08;_eAED=0.08;_QI=132|1|1|1|1|1|4|232|363 |
chr4_2 | exon | 52177213 | 52177791 | 52177213 | ID=Msa0606080-mRNA-1:exon:12614;Parent=Msa0606080-mRNA-1 |
chr4_2 | exon | 52177897 | 52178016 | 52177897 | ID=Msa0606080-mRNA-1:exon:12615;Parent=Msa0606080-mRNA-1 |
chr4_2 | exon | 52178463 | 52178709 | 52178463 | ID=Msa0606080-mRNA-1:exon:12616;Parent=Msa0606080-mRNA-1 |
chr4_2 | exon | 52178814 | 52179323 | 52178814 | ID=Msa0606080-mRNA-1:exon:12617;Parent=Msa0606080-mRNA-1 |
chr4_2 | five_prime_UTR | 52177213 | 52177344 | 52177213 | ID=Msa0606080-mRNA-1:five_prime_utr;Parent=Msa0606080-mRNA-1 |
chr4_2 | CDS | 52177345 | 52177791 | 52177345 | ID=Msa0606080-mRNA-1:cds;Parent=Msa0606080-mRNA-1 |
chr4_2 | CDS | 52177897 | 52178016 | 52177897 | ID=Msa0606080-mRNA-1:cds;Parent=Msa0606080-mRNA-1 |
chr4_2 | CDS | 52178463 | 52178709 | 52178463 | ID=Msa0606080-mRNA-1:cds;Parent=Msa0606080-mRNA-1 |
chr4_2 | CDS | 52178814 | 52179091 | 52178814 | ID=Msa0606080-mRNA-1:cds;Parent=Msa0606080-mRNA-1 |
chr4_2 | three_prime_UTR | 52179092 | 52179323 | 52179092 | ID=Msa0606080-mRNA-1:three_prime_utr;Parent=Msa0606080-mRNA-1 |
Gene Sequence |
Protein sequence |