AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0828250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0828250 MtrunA17_Chr2g0329131 99.685 1269 4 0 1 1269 1 1269 0.0 2628
Msa0828250 MtrunA17_Chr3g0100131 86.101 1144 112 5 142 1269 178 1290 0.0 2027
Msa0828250 MtrunA17_Chr1g0156271 47.805 820 386 11 412 1211 405 1202 0.0 775
Msa0828250 MtrunA17_Chr1g0211961 47.101 845 403 11 386 1211 348 1167 0.0 773
Msa0828250 MtrunA17_Chr3g0086391 49.705 678 327 6 522 1197 369 1034 0.0 693
Msa0828250 MtrunA17_Chr1g0194381 43.881 670 349 8 564 1213 50 712 0.0 602
Msa0828250 MtrunA17_Chr3g0099251 41.185 675 342 9 564 1192 48 713 0.0 556
Msa0828250 MtrunA17_Chr4g0044491 43.627 612 322 7 618 1213 78 682 1.98e-180 548
Msa0828250 MtrunA17_Chr2g0283271 41.248 657 357 7 566 1199 48 698 3.82e-178 543
Msa0828250 MtrunA17_Chr7g0259941 40.634 694 345 8 562 1196 39 724 6.28e-176 538
Msa0828250 MtrunA17_Chr8g0359501 40.346 694 347 8 562 1196 39 724 1.53e-174 534
Msa0828250 MtrunA17_Chr8g0377111 43.458 642 322 11 571 1185 4 631 2.32e-173 530
Msa0828250 MtrunA17_Chr5g0432591 55.502 418 177 4 562 974 200 613 8.82e-158 486
Msa0828250 MtrunA17_Chr3g0100151 90.612 245 20 1 836 1080 31 272 7.40e-152 457
Msa0828250 MtrunA17_Chr3g0100171 94.836 213 11 0 875 1087 49 261 1.73e-141 437
Msa0828250 MtrunA17_Chr6g0476001 51.813 386 175 3 522 906 211 586 2.42e-130 412
Msa0828250 MtrunA17_Chr3g0123681 34.164 682 387 15 571 1216 266 921 3.89e-101 355
Msa0828250 MtrunA17_Chr3g0082091 34.493 661 369 17 588 1211 4 637 3.21e-96 338
Msa0828250 MtrunA17_Chr1g0208961 33.333 642 340 16 562 1122 320 954 5.56e-96 335
Msa0828250 MtrunA17_Chr1g0164621 34.586 665 365 18 588 1211 4 639 5.61e-96 337
Msa0828250 MtrunA17_Chr8g0392581 30.663 724 390 20 562 1189 264 971 2.30e-87 309
Msa0828250 MtrunA17_Chr8g0355291 33.077 650 333 14 562 1122 240 876 4.98e-81 290
Msa0828250 MtrunA17_Chr8g0354481 50.000 202 97 1 671 872 1 198 1.86e-61 208
Msa0828250 MtrunA17_Chr4g0010901 40.433 277 132 4 564 807 265 541 1.62e-56 215
Msa0828250 MtrunA17_Chr4g0010901 42.021 188 109 0 817 1004 692 879 1.81e-37 154
Msa0828250 MtrunA17_Chr8g0359451 44.255 235 88 2 576 767 19 253 5.61e-56 196
Msa0828250 MtrunA17_Chr1g0177141 34.845 419 247 10 780 1180 543 953 2.26e-52 201
Msa0828250 MtrunA17_Chr1g0177141 42.056 214 108 3 562 769 259 462 8.59e-42 167
Msa0828250 MtrunA17_Chr5g0432601 39.810 211 121 4 990 1197 1 208 4.45e-49 174
Msa0828250 MtrunA17_Chr6g0475991 36.066 244 122 4 956 1197 1 212 4.41e-47 169
Msa0828250 MtrunA17_Chr0c12g0493631 31.953 338 203 4 780 1096 151 482 1.12e-40 161
Msa0828250 MtrunA17_Chr5g0442401 31.343 335 204 9 773 1092 547 870 3.87e-39 159
Msa0828250 MtrunA17_Chr5g0442401 35.498 231 128 6 553 770 172 394 2.34e-33 140
Msa0828250 MtrunA17_Chr1g0195601 28.444 450 268 11 570 977 29 466 1.03e-38 157
Msa0828250 MtrunA17_Chr4g0067511 42.021 188 109 0 817 1004 341 528 1.74e-37 153
Msa0828250 MtrunA17_Chr4g0067511 35.256 156 74 3 679 807 35 190 3.17e-21 100
Msa0828250 MtrunA17_Chr8g0354471 51.049 143 63 3 522 663 67 203 7.13e-36 135
Msa0828250 MtrunA17_Chr8g0354491 42.105 152 86 2 968 1117 1 152 1.20e-35 132
Msa0828250 MtrunA17_Chr4g0077061 30.449 312 190 8 465 750 487 797 2.38e-32 137
Msa0828250 MtrunA17_Chr4g0077061 33.745 243 140 3 846 1086 957 1180 1.09e-29 128
Msa0828250 MtrunA17_Chr8g0355531 38.710 155 92 2 886 1038 1 154 6.42e-22 94.0
Msa0828250 MtrunA17_Chr4g0067501 53.448 58 27 0 617 674 30 87 2.59e-15 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0828250 AT5G13010.1 76.378 1270 272 12 11 1269 3 1255 0.0 1916
Msa0828250 AT3G26560.1 45.675 867 411 12 375 1211 311 1147 0.0 764
Msa0828250 AT2G35340.1 46.121 696 354 5 517 1197 337 1026 0.0 691
Msa0828250 AT1G32490.2 47.668 686 342 7 522 1197 338 1016 0.0 689
Msa0828250 AT2G35340.2 46.121 696 354 5 517 1197 199 888 0.0 689
Msa0828250 AT1G32490.1 47.668 686 342 7 522 1197 348 1026 0.0 689
Msa0828250 AT4G16680.2 48.035 687 338 7 561 1239 121 796 0.0 671
Msa0828250 AT3G62310.1 43.924 683 351 10 564 1224 54 726 0.0 605
Msa0828250 AT2G47250.1 43.536 673 351 9 564 1214 58 723 0.0 598
Msa0828250 AT4G18465.1 41.604 661 358 8 564 1202 41 695 2.59e-177 541
Msa0828250 AT1G27900.1 40.652 706 368 14 571 1237 4 697 5.86e-172 527
Msa0828250 AT1G26370.1 38.494 704 369 8 551 1197 21 717 1.39e-170 524
Msa0828250 AT1G27900.3 44.444 540 283 6 571 1099 4 537 1.48e-160 491
Msa0828250 AT1G27900.2 44.444 540 283 6 571 1099 4 537 2.39e-160 491
Msa0828250 AT3G62310.3 49.789 474 221 5 564 1024 54 523 1.51e-159 489
Msa0828250 AT3G62310.2 49.683 473 221 5 564 1023 54 522 1.71e-157 484
Msa0828250 AT4G16680.1 54.779 429 182 3 561 985 201 621 2.67e-157 487
Msa0828250 AT5G10370.1 34.573 726 400 19 530 1207 259 957 4.54e-102 358
Msa0828250 AT4G01020.1 34.796 661 363 15 571 1190 303 936 1.19e-97 345
Msa0828250 AT2G01130.2 33.770 610 320 13 564 1097 148 749 2.45e-91 319
Msa0828250 AT2G01130.1 33.770 610 320 13 564 1097 213 814 4.58e-91 319
Msa0828250 AT1G58050.1 29.186 651 351 16 543 1092 569 1210 4.35e-68 253
Msa0828250 AT1G33390.2 31.798 456 243 6 798 1187 627 1080 5.13e-56 214
Msa0828250 AT1G33390.2 39.502 281 136 5 566 812 236 516 6.09e-55 210
Msa0828250 AT1G33390.1 31.798 456 243 6 798 1187 627 1080 5.13e-56 214
Msa0828250 AT1G33390.1 39.502 281 136 5 566 812 236 516 6.09e-55 210
Msa0828250 AT5G14900.1 35.616 292 169 6 933 1210 2 288 1.46e-53 190
Msa0828250 AT2G35920.2 31.429 455 281 13 754 1189 422 864 3.76e-53 203
Msa0828250 AT2G35920.2 42.308 234 122 4 538 764 136 363 2.64e-44 175
Msa0828250 AT2G35920.1 31.839 446 273 13 754 1180 480 913 3.97e-53 203
Msa0828250 AT2G35920.1 42.308 234 122 4 538 764 194 421 2.20e-44 176
Msa0828250 AT2G35920.3 31.839 446 273 13 754 1180 512 945 7.33e-53 202
Msa0828250 AT2G35920.3 42.308 234 122 4 538 764 226 453 2.29e-44 176
Msa0828250 AT5G04895.1 46.114 193 100 1 562 750 251 443 2.45e-45 179
Msa0828250 AT5G04895.1 32.283 381 227 10 761 1122 519 887 1.68e-41 167
Msa0828250 AT1G48650.1 46.305 203 97 3 568 764 296 492 1.89e-44 176
Msa0828250 AT1G48650.1 34.946 372 212 12 779 1136 578 933 7.99e-43 171
Msa0828250 AT1G48650.2 46.305 203 97 3 568 764 296 492 2.16e-44 176
Msa0828250 AT1G48650.2 34.946 372 212 12 779 1136 578 933 8.09e-43 171
Msa0828250 AT1G58060.1 29.209 493 270 15 760 1182 894 1377 2.46e-44 176
Msa0828250 AT1G58060.1 38.431 255 126 7 513 750 567 807 1.70e-35 148
Msa0828250 AT2G30800.1 33.333 330 200 6 780 1097 552 873 1.27e-40 164
Msa0828250 AT2G30800.1 35.616 219 127 4 543 754 165 376 1.73e-37 154
Msa0828250 AT2G30800.2 33.333 330 200 6 780 1097 209 530 1.56e-40 163
Msa0828250 AT1G06670.2 34.535 333 196 9 758 1077 554 877 3.61e-40 163
Msa0828250 AT1G06670.2 32.090 268 156 5 502 754 150 406 1.03e-35 149
Msa0828250 AT1G06670.1 34.535 333 196 9 758 1077 554 877 3.64e-40 163
Msa0828250 AT1G06670.1 32.090 268 156 5 502 754 150 406 1.05e-35 149
Msa0828250 AT2G47680.1 30.049 406 235 11 571 940 26 418 8.53e-38 154

Find 357 sgRNAs with CRISPR-Local

Find 679 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTCGTTAAAATTGGAATT+TGG 0.090654 5_4:-613715 None:intergenic
TCAGTCAAATCTTCTGTTTC+TGG 0.108054 5_4:+608426 Msa0828250:CDS
AAGGTTTCTGCTTCACCTTC+TGG 0.184399 5_4:+607755 Msa0828250:intron
TTCCGATTACTCGTTAAAAT+TGG 0.218280 5_4:-613722 None:intergenic
CTGAAATATTTGTAAACTTA+TGG 0.223788 5_4:+613669 Msa0828250:three_prime_UTR
ATAAGTCTCGCCAACGCTTT+TGG 0.228112 5_4:+610163 Msa0828250:CDS
ATCGAAGTGGTTATCTCTTT+TGG 0.246931 5_4:-606191 None:intergenic
TTCACCTTTATTACGGTATT+TGG 0.263908 5_4:-611336 None:intergenic
TTTACTCGACTTTGATTTCA+TGG 0.264172 5_4:+612695 Msa0828250:CDS
CATTTCCTGTCAATATATTA+TGG 0.267336 5_4:+612088 Msa0828250:CDS
AGCCGGAAGCTGAGAATATA+TGG 0.271709 5_4:-612310 None:intergenic
TCAGCAGCAGCGCGACTAAC+AGG 0.277141 5_4:-612510 None:intergenic
ATTTGTACTTGAATTTGTTT+TGG 0.290248 5_4:+613835 Msa0828250:three_prime_UTR
CTTTCTTCAATATTCCAAAA+AGG 0.292224 5_4:-611869 None:intergenic
CCTAGAAGTTACCAGTCTTT+TGG 0.294341 5_4:-608903 None:intergenic
GACTGAACTTGGCTGGAAAA+TGG 0.295681 5_4:+612797 Msa0828250:CDS
CTCTCCTCTGCTCGGTCCTT+TGG 0.303595 5_4:-612939 None:intergenic
GTGGTTGTAGTTGGGGAAAC+TGG 0.304711 5_4:+610980 Msa0828250:CDS
ACTCGTTAAAATTGGAATTT+GGG 0.309494 5_4:-613714 None:intergenic
ATCAGGTTGTGGTTGTAGTT+GGG 0.315445 5_4:+610972 Msa0828250:CDS
CTGTGCTTAATGACCTTTCA+TGG 0.317207 5_4:-611842 None:intergenic
TCCCATATATTCTCAGCTTC+CGG 0.318688 5_4:+612308 Msa0828250:CDS
TGGGAAGAATCAAAAGTTTC+GGG 0.321094 5_4:-612290 None:intergenic
AGAGCGTCCATACCCATTCT+AGG 0.323484 5_4:-612477 None:intergenic
TTTCTAACTACATCTGTATC+AGG 0.327264 5_4:-613170 None:intergenic
CAGCAGCAGATTTCCATTCC+AGG 0.327574 5_4:+613584 Msa0828250:CDS
GGAGTGAGAGGAGGCATTCT+AGG 0.334669 5_4:+607798 Msa0828250:CDS
GACTGGCCAACATTTCATTT+AGG 0.338938 5_4:-612602 None:intergenic
AGGTTAGTTCTTTGAATCTC+TGG 0.340415 5_4:-612630 None:intergenic
AGTTTGAATAGATGGCAATT+TGG 0.343274 5_4:-613919 None:intergenic
ATCAGGAAAGCACGTGGTTA+AGG 0.345748 5_4:-613153 None:intergenic
GGTGGTGGACTCTATGTTCC+TGG 0.347404 5_4:+605445 Msa0828250:CDS
ATTTATAAGTTGCTAAGTTT+AGG 0.347646 5_4:-613983 None:intergenic
ATATTACAAGTTTGAATAGA+TGG 0.350980 5_4:-613927 None:intergenic
GACAACAAACCTGTGTCAAT+TGG 0.352546 5_4:-611018 None:intergenic
TACCCTTGCCATTGCAAAAC+GGG 0.357929 5_4:+606136 Msa0828250:CDS
TCAAAACTTGGCGATATCTT+AGG 0.358688 5_4:+610198 Msa0828250:CDS
ATGGGAAGAATCAAAAGTTT+CGG 0.363031 5_4:-612291 None:intergenic
AGAGTTAAATGATCGGATTC+TGG 0.369550 5_4:-612990 None:intergenic
ACTCCGATTTAGACAAATAT+AGG 0.381184 5_4:+611703 Msa0828250:CDS
TGGACCAAATACCGTAATAA+AGG 0.385271 5_4:+611332 Msa0828250:CDS
CTGAGATCAGGTGCTGTTAG+AGG 0.387539 5_4:+609832 Msa0828250:CDS
AGTGCGAGAAGAGTTATTAC+AGG 0.387845 5_4:+610490 Msa0828250:CDS
AGCTGCGACACGCCTTGGTT+GGG 0.390524 5_4:-611223 None:intergenic
CCAGTTGAAGATTATGTTGA+AGG 0.390538 5_4:+612120 Msa0828250:CDS
TATGAAGATGGCTATACTAT+TGG 0.391138 5_4:+611183 Msa0828250:CDS
GATGACATGGCATCCCATTC+CGG 0.392492 5_4:-613259 None:intergenic
GCTGGTCGAGCTGGTCGAAC+TGG 0.396990 5_4:+612540 Msa0828250:CDS
TGTTGAACCCTAGAGATAGA+AGG 0.398376 5_4:-605090 None:intergenic
AACGGCCATGGAGGAGGAAA+TGG 0.398391 5_4:+613487 Msa0828250:CDS
GTTCTTTGAATCTCTGGAAC+AGG 0.402053 5_4:-612624 None:intergenic
AATCAGGTTGTGGTTGTAGT+TGG 0.407992 5_4:+610971 Msa0828250:CDS
ATACCTATATTTGTCTAAAT+CGG 0.409739 5_4:-611706 None:intergenic
GAAACAGAAACGAGAGAAAA+CGG 0.412041 5_4:+613469 Msa0828250:CDS
ACCGGAGAGAAAATCTCGTT+TGG 0.412360 5_4:+605492 Msa0828250:CDS
CCTGTTCCAATACGTGCTTC+TGG 0.413064 5_4:+608399 Msa0828250:CDS
CAATTCTATGTACCAGTTGT+GGG 0.415218 5_4:+612743 Msa0828250:CDS
TATGTACCAGTTGTGGGTGT+TGG 0.415508 5_4:+612749 Msa0828250:CDS
ATGACATGGCATCCCATTCC+GGG 0.417059 5_4:-613258 None:intergenic
GGACCATGGCCGATGGGAAT+GGG 0.417670 5_4:+608080 Msa0828250:CDS
TCGTGATAAACCACATAATC+AGG 0.418416 5_4:-613320 None:intergenic
TAGCTGCGACACGCCTTGGT+TGG 0.418462 5_4:-611224 None:intergenic
TCACCATCCCCAATGTTTGT+TGG 0.420600 5_4:+608153 Msa0828250:CDS
ACAATTTCTTGCTTTGAGAA+AGG 0.421311 5_4:-609765 None:intergenic
GTCCAAGCTCAGCCATCCAC+TGG 0.421334 5_4:-613394 None:intergenic
CATAATAGGCTCTGCCTGCT+TGG 0.422406 5_4:-610052 None:intergenic
GAAGTTGTTCACCTTTATTA+CGG 0.425532 5_4:-611343 None:intergenic
CAATTTCTTGCTTTGAGAAA+GGG 0.426047 5_4:-609764 None:intergenic
CACAATTCAGCAAGACTAAA+GGG 0.427814 5_4:+613215 Msa0828250:CDS
CAGCTTGAAATCACGGCGTT+GGG 0.431853 5_4:-611898 None:intergenic
GAACTTGCAGGCTCAAAACT+TGG 0.434385 5_4:+610186 Msa0828250:CDS
AACAACTCTGCCGTCAAGAA+AGG 0.436041 5_4:-610025 None:intergenic
TTCACCCATCAAAAGCATCT+TGG 0.436821 5_4:-612847 None:intergenic
GTGAGGCGCCAACAAACATT+GGG 0.437106 5_4:-608161 None:intergenic
CAGCAAGACTAAAGGGTGTC+GGG 0.437366 5_4:+613222 Msa0828250:CDS
CCCCAGTGGATGGCTGAGCT+TGG 0.438475 5_4:+613392 Msa0828250:CDS
TAGATAATTCACCTTCTCCT+TGG 0.440155 5_4:+608358 Msa0828250:intron
TATACTATTGGCGGTATAGT+AGG 0.444241 5_4:+611195 Msa0828250:CDS
CCAGAAGCACGTATTGGAAC+AGG 0.445989 5_4:-608399 None:intergenic
CACCCCAGTAGTGCTCTCTA+TGG 0.446378 5_4:+613284 Msa0828250:CDS
GCTGCTGCTGACCAGCGTGC+TGG 0.446462 5_4:+612522 Msa0828250:CDS
CATCTCCTCGCTAACTCTCT+TGG 0.447380 5_4:-611256 None:intergenic
AACATCCTTCTTCTCTATTG+TGG 0.448062 5_4:+605109 Msa0828250:five_prime_UTR
CGAGCTGGTCGAACTGGCCC+TGG 0.449901 5_4:+612546 Msa0828250:CDS
TCCAAGCTCAGCCATCCACT+GGG 0.450606 5_4:-613393 None:intergenic
TACAGCTGATAATGCTCAAT+GGG 0.451219 5_4:+609795 Msa0828250:CDS
GGCGCGGTGGATAATGAAAC+AGG 0.451322 5_4:-605047 None:intergenic
GATCGGCAGCTGCTGAGATC+AGG 0.452442 5_4:+609820 Msa0828250:CDS
TGTTTCTATGTCGGACCTCC+CGG 0.453154 5_4:-607841 None:intergenic
ACAACAAACCTGTGTCAATT+GGG 0.454396 5_4:-611017 None:intergenic
CTACTCCCTTGCTGAAAGAA+TGG 0.454600 5_4:+612236 Msa0828250:CDS
TCCGGCTACTTCCTGCTCCT+AGG 0.455014 5_4:+613784 Msa0828250:three_prime_UTR
GAGGAGATGGACACAGAGTT+GGG 0.456183 5_4:+611270 Msa0828250:CDS
TCAGGAAAGCACGTGGTTAA+GGG 0.456921 5_4:-613152 None:intergenic
TATCTGCAGGCAGATCTGAC+TGG 0.457108 5_4:+608058 Msa0828250:intron
TCAAAGTGATGGGGCATTCA+AGG 0.457886 5_4:+606166 Msa0828250:CDS
GTAGTTGGGGAAACTGGTTC+AGG 0.458547 5_4:+610986 Msa0828250:CDS
GGGACCATGGCCGATGGGAA+TGG 0.458757 5_4:+608079 Msa0828250:CDS
GAAGGTGTACAACCCTAGAA+TGG 0.459520 5_4:+612464 Msa0828250:CDS
GGAAATCTGCTGCTGACTCT+TGG 0.459825 5_4:-613576 None:intergenic
CCTTCAACATAATCTTCAAC+TGG 0.460140 5_4:-612120 None:intergenic
GCAGGTGATTCGAGAAAATC+AGG 0.462168 5_4:+610955 Msa0828250:intron
AGATAATTCACCTTCTCCTT+GGG 0.462285 5_4:+608359 Msa0828250:intron
ATGTACCAGTTGTGGGTGTT+GGG 0.463425 5_4:+612750 Msa0828250:CDS
CTCATAGCTGCGACACGCCT+TGG 0.464834 5_4:-611228 None:intergenic
GCAACCTCCCTTCTATCTCT+AGG 0.464996 5_4:+605082 Msa0828250:five_prime_UTR
AGTTAGAGAGAGAAAATAAA+CGG 0.466140 5_4:+613534 Msa0828250:CDS
ATCTTTGCTTGCAAGTCAGC+CGG 0.466412 5_4:-612327 None:intergenic
CGAGGAGATGGACACAGAGT+TGG 0.466666 5_4:+611269 Msa0828250:CDS
TCAATTCTATGTACCAGTTG+TGG 0.466804 5_4:+612742 Msa0828250:CDS
CTAGAGACACCGTCCCTTCG+TGG 0.467961 5_4:-608111 None:intergenic
AGAAAATAAACGGAAGGAGA+AGG 0.468868 5_4:+613544 Msa0828250:CDS
TATTCGAACTCTGCTTCTCA+TGG 0.468897 5_4:-610143 None:intergenic
ATAGCGAGCTGCGACTGCTT+TGG 0.469800 5_4:-605020 None:intergenic
ACAAAGCCTCCCTTTCTTGA+CGG 0.470785 5_4:+610015 Msa0828250:CDS
GACCAGCGTGCTGGTCGAGC+TGG 0.470902 5_4:+612531 Msa0828250:CDS
TTACTCCATAATATATTGAC+AGG 0.471177 5_4:-612093 None:intergenic
TGAAGGTATGATAGAGAGGA+AGG 0.471895 5_4:+608800 Msa0828250:intron
CAGTAGTGCTCTCTATGGCA+TGG 0.475345 5_4:+613289 Msa0828250:CDS
GGAGAAACTAATCGTGCATC+AGG 0.476125 5_4:-608183 None:intergenic
TCTTGAGAATATCAAGCAGC+TGG 0.476588 5_4:-613118 None:intergenic
GGGTTGCACTCCTGATTATG+TGG 0.477387 5_4:+613310 Msa0828250:CDS
CAGCATCACTCTCCTCTGCT+CGG 0.477584 5_4:-612947 None:intergenic
GCATGTTAAAGGTCTAAGAA+AGG 0.481224 5_4:+613079 Msa0828250:CDS
GGCCGAGTTGGCCAAAAGAC+TGG 0.484516 5_4:+608892 Msa0828250:CDS
CCACAATTCAGCAAGACTAA+AGG 0.484623 5_4:+613214 Msa0828250:CDS
GATATGACAGGGATGATCAT+AGG 0.485230 5_4:+607777 Msa0828250:CDS
GGGCGCCCAACACCCACAAC+TGG 0.486013 5_4:-612755 None:intergenic
TCAGCTTGAAATCACGGCGT+TGG 0.487643 5_4:-611899 None:intergenic
TATTCACAGGTCCGAAGAGA+TGG 0.488187 5_4:+609730 Msa0828250:intron
GGAGTCTGATACATCACTAC+TGG 0.488773 5_4:+613436 Msa0828250:CDS
TGATGTCTCAGCAATATTAG+TGG 0.489043 5_4:-612391 None:intergenic
CCGGAGAGAAAATCTCGTTT+GGG 0.489104 5_4:+605493 Msa0828250:CDS
ACATCTTAGTCCCATCTCTT+CGG 0.490668 5_4:-609741 None:intergenic
CAACCTCCCTTCTATCTCTA+GGG 0.490796 5_4:+605083 Msa0828250:five_prime_UTR
ACCTGCACGTGATGTTTCAC+TGG 0.492086 5_4:-606321 None:intergenic
GAAACAGATATGAAGGTTCA+AGG 0.492435 5_4:+607939 Msa0828250:CDS
TGATTCAAGGAGTGACAGCC+GGG 0.493181 5_4:+607823 Msa0828250:CDS
TGTGCTTAATGACCTTTCAT+GGG 0.493916 5_4:-611841 None:intergenic
GGCAGATCTGACTGGGACCA+TGG 0.498478 5_4:+608066 Msa0828250:intron
CCTTTAGTCTTGCTGAATTG+TGG 0.499965 5_4:-613214 None:intergenic
TTGAATCTCTGGAACAGGAC+TGG 0.500110 5_4:-612619 None:intergenic
TGTATCAGCATGGTGATCTT+CGG 0.501456 5_4:-606748 None:intergenic
GGCACATTGCATGTACTCCT+TGG 0.501847 5_4:-613357 None:intergenic
CCGGCTACTTCCTGCTCCTA+GGG 0.502542 5_4:+613785 Msa0828250:three_prime_UTR
CTGTTTCAGGGTTATTGTGA+TGG 0.504129 5_4:+611812 Msa0828250:intron
AGAGAAAACGGCCATGGAGG+AGG 0.504464 5_4:+613481 Msa0828250:CDS
TTCTCGCAAAGGATCTGCTC+TGG 0.504996 5_4:+610110 Msa0828250:CDS
TGCTTACCTAAATGAAATGT+TGG 0.505038 5_4:+612596 Msa0828250:CDS
ATCTGCAGGCAGATCTGACT+GGG 0.506501 5_4:+608059 Msa0828250:intron
GAGTATGTTAACACCCGGAA+TGG 0.506647 5_4:+613245 Msa0828250:CDS
CTTCACCTTCTGGATATGAC+AGG 0.506893 5_4:+607765 Msa0828250:CDS
GAAGAGCCAGAAGCACGTAT+TGG 0.507750 5_4:-608405 None:intergenic
CAAGAGAGTTAGCGAGGAGA+TGG 0.508023 5_4:+611257 Msa0828250:CDS
GAACCGTTCGACTGAGCGTA+GGG 0.512239 5_4:+606776 Msa0828250:CDS
TGTTGAAGGTGCAGTAAAGC+AGG 0.512816 5_4:+612134 Msa0828250:CDS
CTTGGCCAGTCATGAAGATA+AGG 0.513002 5_4:-612194 None:intergenic
ACAACTCTGCCGTCAAGAAA+GGG 0.514009 5_4:-610024 None:intergenic
CATGCCATAGAGAGCACTAC+TGG 0.515495 5_4:-613288 None:intergenic
GGAAATGGAGAATTTAAAGA+AGG 0.516513 5_4:+613502 Msa0828250:CDS
AGTAGTGCTCTCTATGGCAT+GGG 0.517604 5_4:+613290 Msa0828250:CDS
TCAGGTTGTGGTTGTAGTTG+GGG 0.518299 5_4:+610973 Msa0828250:CDS
GAAAATGGTTGAGTTTCCAC+TGG 0.518935 5_4:+612812 Msa0828250:CDS
GGTGAGGCGCCAACAAACAT+TGG 0.518952 5_4:-608162 None:intergenic
ATTCTCCATTTCCTCCTCCA+TGG 0.519332 5_4:-613492 None:intergenic
AACAGATGGTACTGAAAGCA+TGG 0.522201 5_4:-612907 None:intergenic
TTGGGCGCCCTTAACAATGT+GGG 0.523033 5_4:+612768 Msa0828250:CDS
TCTGATGTTGTTGAGGAAAG+TGG 0.523225 5_4:+606251 Msa0828250:CDS
TAACAGTATCTATATGAAGA+TGG 0.523406 5_4:+611171 Msa0828250:intron
AGTATGTTAACACCCGGAAT+GGG 0.523996 5_4:+613246 Msa0828250:CDS
TTGTAAACTTATGGAGGAGA+GGG 0.524196 5_4:+613678 Msa0828250:three_prime_UTR
TCGTACCACAATAGAGAAGA+AGG 0.524243 5_4:-605114 None:intergenic
ATTAAAGCCATGTCAGATGT+TGG 0.525228 5_4:-610087 None:intergenic
AGAATATTATCCTGCGGAGG+TGG 0.525395 5_4:-612720 None:intergenic
AGAAAGCGAAACAGATATGA+AGG 0.525408 5_4:+607932 Msa0828250:CDS
CTTCCCATTCCCATCGGCCA+TGG 0.525697 5_4:-608083 None:intergenic
TACAATCGATAGCATGTACC+AGG 0.526227 5_4:-612564 None:intergenic
ATACCCTTGCCATTGCAAAA+CGG 0.526324 5_4:+606135 Msa0828250:CDS
TTTGTCATAGACACAGGCTA+TGG 0.526585 5_4:+612435 Msa0828250:CDS
CCCTAGGAGCAGGAAGTAGC+CGG 0.527299 5_4:-613785 None:intergenic
ATTATGAAGGTATGATAGAG+AGG 0.527346 5_4:+608796 Msa0828250:intron
ATGATTCAAGGAGTGACAGC+CGG 0.527409 5_4:+607822 Msa0828250:CDS
TGAAAGCATGCGTCAAGAGA+TGG 0.527593 5_4:+608654 Msa0828250:CDS
CCAGAAAAGTCTACCGGTGG+TGG 0.529130 5_4:+605430 Msa0828250:CDS
GAGTGAGAGGAGGCATTCTA+GGG 0.531493 5_4:+607799 Msa0828250:CDS
CAGGAAGGGATTCACGTAGT+AGG 0.532759 5_4:+607888 Msa0828250:CDS
AGCGGTAGAGCCCCAGTGGA+TGG 0.533007 5_4:+613382 Msa0828250:CDS
ATAGAAACAATTATGACAGT+AGG 0.533273 5_4:+607855 Msa0828250:CDS
GTTGAGGAAAGTGGGCAGGC+AGG 0.533945 5_4:+606260 Msa0828250:CDS
GAAGATGGCTATACTATTGG+CGG 0.534167 5_4:+611186 Msa0828250:CDS
AATAGCAGATAAATCTGACT+TGG 0.534804 5_4:+608606 Msa0828250:CDS
CTGCTCCATTCTTTCAGCAA+GGG 0.535439 5_4:-612241 None:intergenic
TTACAGCTGATAATGCTCAA+TGG 0.535650 5_4:+609794 Msa0828250:CDS
TGTCATAATTGTTTCTATGT+CGG 0.535891 5_4:-607850 None:intergenic
CAGAGTTGTTTATACCAAGC+AGG 0.536995 5_4:+610038 Msa0828250:CDS
GTTGGGCGCCCTTAACAATG+TGG 0.537780 5_4:+612767 Msa0828250:CDS
GGGGAGAGTCTCAAAGTGAT+GGG 0.538995 5_4:+606156 Msa0828250:CDS
AAGGTGTACAACCCTAGAAT+GGG 0.539629 5_4:+612465 Msa0828250:CDS
CGGGGAGAGTCTCAAAGTGA+TGG 0.540637 5_4:+606155 Msa0828250:CDS
TGATGCAGACACTGCTGTTG+TGG 0.540862 5_4:+610337 Msa0828250:CDS
GAAGGTTCAAGGAGAACGCC+TGG 0.540880 5_4:+607950 Msa0828250:CDS
GGAGGTTGCTGATAGAGATC+CGG 0.542611 5_4:-605068 None:intergenic
AAAAGTATGAATTATTGAGT+TGG 0.543204 5_4:+613743 Msa0828250:three_prime_UTR
GTACAACCCTAGAATGGGTA+TGG 0.544901 5_4:+612470 Msa0828250:CDS
AGAGAGAGAAAATAAACGGA+AGG 0.545920 5_4:+613538 Msa0828250:CDS
TTTCAGTTGCATCACCGCCA+TGG 0.546863 5_4:+605256 Msa0828250:exon
TGCTGAAAGAATGGAGCAGA+TGG 0.548740 5_4:+612245 Msa0828250:CDS
TAAACCACTCGATCCTTCCC+AGG 0.549553 5_4:-605463 None:intergenic
AGAAAACTCAGATACATATG+AGG 0.551682 5_4:+608485 Msa0828250:CDS
CTGACTGGGACCATGGCCGA+TGG 0.552717 5_4:+608073 Msa0828250:CDS
GGGGATTGACTGAACTTGGC+TGG 0.555446 5_4:+612790 Msa0828250:CDS
ATTCACAGGTCCGAAGAGAT+GGG 0.556356 5_4:+609731 Msa0828250:intron
ACTGCTGTTGTGGGTGAAGA+TGG 0.556433 5_4:+610347 Msa0828250:CDS
ATAATGCTCAATGGGAAGAT+CGG 0.556602 5_4:+609803 Msa0828250:CDS
GAGATTCAAAGAACTAACCT+TGG 0.556963 5_4:+612633 Msa0828250:CDS
GGCATTCTAGGGATGATTCA+AGG 0.557334 5_4:+607810 Msa0828250:CDS
GATGCAGACACTGCTGTTGT+GGG 0.558748 5_4:+610338 Msa0828250:CDS
AACACGATTACAGAGGTGAT+TGG 0.558769 5_4:+613039 Msa0828250:CDS
CAGCAGCAGCGCGACTAACA+GGG 0.560600 5_4:-612509 None:intergenic
ATGGCTTTAATTTCTCGCAA+AGG 0.561077 5_4:+610099 Msa0828250:CDS
GATTCGAGAAAATCAGGTTG+TGG 0.562212 5_4:+610961 Msa0828250:CDS
AGGTCTAAGAAAGGCTAGAG+AGG 0.563322 5_4:+613088 Msa0828250:CDS
CACAGGCTATGGTAAAATGA+AGG 0.563925 5_4:+612446 Msa0828250:CDS
GACAGTAGGGAGTCTTACTC+AGG 0.564012 5_4:+607869 Msa0828250:CDS
ATCTTCTTTGTCATAGACAC+AGG 0.564758 5_4:+612429 Msa0828250:CDS
TAAACTTATGGAGGAGAGGG+AGG 0.564969 5_4:+613681 Msa0828250:three_prime_UTR
GACATCCTTATCTTCATGAC+TGG 0.566339 5_4:+612189 Msa0828250:CDS
GATCACCATGCTGATACATA+CGG 0.566562 5_4:+606753 Msa0828250:CDS
ACATTGCATGTACTCCTTGG+TGG 0.566562 5_4:-613354 None:intergenic
TATACAATGTCTATCAGCAA+TGG 0.567080 5_4:+613012 Msa0828250:CDS
TCAGCAAGACTAAAGGGTGT+CGG 0.567989 5_4:+613221 Msa0828250:CDS
TGGGCGCCCTTAACAATGTG+GGG 0.568093 5_4:+612769 Msa0828250:CDS
GTGTGAGTGACCCTAGGAGC+AGG 0.568798 5_4:-613795 None:intergenic
ACAGAGTTGGGAGATAAAGT+TGG 0.569496 5_4:+611282 Msa0828250:CDS
CTGTTTCTGGATATAATCGA+AGG 0.571217 5_4:+608439 Msa0828250:CDS
GAGCGTCCATACCCATTCTA+GGG 0.572526 5_4:-612476 None:intergenic
GCACGTATTGGAACAGGAGA+CGG 0.573263 5_4:-608393 None:intergenic
GACTGGCCAAGACGAGATTG+AGG 0.573305 5_4:+612206 Msa0828250:CDS
TGACAATCAGCTTGAAATCA+CGG 0.574163 5_4:-611905 None:intergenic
GAAACATGGTCCCAAGGAGA+AGG 0.574516 5_4:-608369 None:intergenic
CTGCAAGTTCCCAAAAGCGT+TGG 0.574712 5_4:-610173 None:intergenic
ACTAAATTACATACCATGCT+CGG 0.575391 5_4:-608690 None:intergenic
AAGCTGCCTCAATCTCGTCT+TGG 0.577038 5_4:-612212 None:intergenic
GTGGTGGACTCTATGTTCCT+GGG 0.578333 5_4:+605446 Msa0828250:CDS
ATGCCATAGAGAGCACTACT+GGG 0.578929 5_4:-613287 None:intergenic
GAAACGAGAGAAAACGGCCA+TGG 0.579103 5_4:+613475 Msa0828250:CDS
TTGACAGGAAATGTTCTCCC+AGG 0.579205 5_4:-612078 None:intergenic
TGGACTCTATGTTCCTGGGA+AGG 0.579819 5_4:+605450 Msa0828250:CDS
GCCGGAAGCTGAGAATATAT+GGG 0.579975 5_4:-612309 None:intergenic
AACCCCTACGCTCAGTCGAA+CGG 0.580835 5_4:-606779 None:intergenic
ATTCACGTAACAAGCCCTCC+AGG 0.580955 5_4:+612165 Msa0828250:CDS
TAGAAACAATTATGACAGTA+GGG 0.583220 5_4:+607856 Msa0828250:CDS
AAAAGCATCTTGGCGAGTGG+AGG 0.584055 5_4:-612837 None:intergenic
ACAAACATTGGGGATGGTGA+AGG 0.584333 5_4:-608150 None:intergenic
GTTGAACCCTAGAGATAGAA+GGG 0.584648 5_4:-605089 None:intergenic
TTTCATGGATCCACCTCCGC+AGG 0.586109 5_4:+612710 Msa0828250:CDS
ACCAGTGAAACATCACGTGC+AGG 0.588847 5_4:+606320 Msa0828250:CDS
AATATGATGCAGACCGAGCA+TGG 0.591105 5_4:+608677 Msa0828250:CDS
TCTGCTCCATTCTTTCAGCA+AGG 0.593352 5_4:-612242 None:intergenic
AAATATTTGTAAACTTATGG+AGG 0.595456 5_4:+613672 Msa0828250:three_prime_UTR
TCGAGTGGTTTACGTGGCAC+CGG 0.596287 5_4:+605474 Msa0828250:CDS
CTGATGTTGTTGAGGAAAGT+GGG 0.596653 5_4:+606252 Msa0828250:CDS
ATCACCATGCTGATACATAC+GGG 0.596993 5_4:+606754 Msa0828250:CDS
ATATTTCAGAAAGCTGAAGA+TGG 0.597112 5_4:+612348 Msa0828250:CDS
GGGATGATCATAGGAGTGAG+AGG 0.597585 5_4:+607786 Msa0828250:CDS
CTACTGGGGTGAAGATGACA+TGG 0.599007 5_4:-613272 None:intergenic
ATCAAAAGCATCTTGGCGAG+TGG 0.601557 5_4:-612840 None:intergenic
TTTGTAAACTTATGGAGGAG+AGG 0.602042 5_4:+613677 Msa0828250:three_prime_UTR
TGACTGGGACCATGGCCGAT+GGG 0.603318 5_4:+608074 Msa0828250:CDS
GACGGAGAAACATGGTCCCA+AGG 0.604985 5_4:-608375 None:intergenic
ATTGTATAGAGTTAAATGAT+CGG 0.605596 5_4:-612997 None:intergenic
AAGGTCATTCTTCTTGTGCA+CGG 0.605865 5_4:+609895 Msa0828250:CDS
GCGCCAACAAACATTGGGGA+TGG 0.608642 5_4:-608156 None:intergenic
AAACAAGACTACAATGACGT+TGG 0.608854 5_4:+605405 Msa0828250:CDS
CTTGAGAATATCAAGCAGCT+GGG 0.608925 5_4:-613117 None:intergenic
AATAACATACAGGATGAATG+AGG 0.609061 5_4:-608216 None:intergenic
AACTAATCGTGCATCAGGTG+AGG 0.609339 5_4:-608178 None:intergenic
TGTTGCCAAGAGAGTTAGCG+AGG 0.609561 5_4:+611251 Msa0828250:CDS
GTTAGAAAGAAGAAATGCAT+CGG 0.610022 5_4:+613893 Msa0828250:three_prime_UTR
TCAGACTGAATTTGATGATG+AGG 0.611050 5_4:+609864 Msa0828250:CDS
ATAGCAGATAAATCTGACTT+GGG 0.613815 5_4:+608607 Msa0828250:CDS
GGGCGCCCTTAACAATGTGG+GGG 0.615956 5_4:+612770 Msa0828250:CDS
GAGTATCTTCCCATTCCCAT+CGG 0.616783 5_4:-608089 None:intergenic
TTTGGCCTAAAGAAAACAGA+TGG 0.617145 5_4:-612921 None:intergenic
AAAGTTAGGGTGTCTTGAGG+AGG 0.617681 5_4:+612869 Msa0828250:CDS
CCACAGCGGTAGAGCCCCAG+TGG 0.619672 5_4:+613378 Msa0828250:CDS
TGATGATGAGGATGAACGCA+AGG 0.621341 5_4:+609876 Msa0828250:CDS
AAATTCGTGTGAGTGACCCT+AGG 0.622323 5_4:-613801 None:intergenic
TGCAGCAGCTGCAATCGAAG+TGG 0.623954 5_4:-606204 None:intergenic
CTGATAGAGATCCGGCGCGG+TGG 0.624254 5_4:-605060 None:intergenic
GGCGCCCTTAACAATGTGGG+GGG 0.624568 5_4:+612771 Msa0828250:CDS
TAGGGAGTCTTACTCAGGAA+GGG 0.624659 5_4:+607874 Msa0828250:CDS
AAGAACTAACCTTGGCAATG+TGG 0.625171 5_4:+612641 Msa0828250:CDS
GGAACCGTTCGACTGAGCGT+AGG 0.625394 5_4:+606775 Msa0828250:CDS
TGTTGTTGAGGAAAGTGGGC+AGG 0.627342 5_4:+606256 Msa0828250:CDS
AAAAGATCCAACATCTGACA+TGG 0.630574 5_4:+610080 Msa0828250:CDS
TTGGCGAGTGGAGGATCCAG+TGG 0.630783 5_4:-612828 None:intergenic
TGTTTCATTATCCACCGCGC+CGG 0.631925 5_4:+605049 Msa0828250:five_prime_UTR
CGGTGGATAATGAAACAGGA+TGG 0.632157 5_4:-605043 None:intergenic
GCAACAAGACCACATTGCCA+AGG 0.633003 5_4:-612650 None:intergenic
TGAAAAGTTAGGGTGTCTTG+AGG 0.639286 5_4:+612866 Msa0828250:CDS
TCGGGGAGTATGTTAACACC+CGG 0.640540 5_4:+613240 Msa0828250:CDS
AGATAAGGATGTCACCTGGA+GGG 0.640777 5_4:-612179 None:intergenic
GTAGGGAGTCTTACTCAGGA+AGG 0.640822 5_4:+607873 Msa0828250:CDS
TTGGAACCAGAAAAGTCTAC+CGG 0.641047 5_4:+605424 Msa0828250:CDS
AGCAAGACTAAAGGGTGTCG+GGG 0.641660 5_4:+613223 Msa0828250:CDS
GAACAGGAGACGGAGAAACA+TGG 0.644244 5_4:-608383 None:intergenic
CCACTGGGGCTCTACCGCTG+TGG 0.644668 5_4:-613378 None:intergenic
ACCCTTGCCATTGCAAAACG+GGG 0.647396 5_4:+606137 Msa0828250:CDS
ACGAGAGAAAACGGCCATGG+AGG 0.648070 5_4:+613478 Msa0828250:CDS
TGATGGATGAAGCCCATGAA+AGG 0.650949 5_4:+611829 Msa0828250:CDS
TTCACCTTCTGGATATGACA+GGG 0.652301 5_4:+607766 Msa0828250:CDS
TGAGTCCTCTGATGTTGTTG+AGG 0.653134 5_4:+606244 Msa0828250:CDS
TAGTAGGTTGCACCCAACCA+AGG 0.654075 5_4:+611211 Msa0828250:CDS
GAGACATCACTGACCGTGGA+TGG 0.654470 5_4:+612405 Msa0828250:CDS
GAAGATACTCCACGAAGGGA+CGG 0.654497 5_4:+608102 Msa0828250:CDS
ATAGTGATGACTAACCTCCA+TGG 0.654711 5_4:-605273 None:intergenic
ATGGGAAGATACTCCACGAA+GGG 0.655110 5_4:+608098 Msa0828250:CDS
ACTTTCCTCAACAACATCAG+AGG 0.656050 5_4:-606249 None:intergenic
ATGAAGATAAGGATGTCACC+TGG 0.656342 5_4:-612183 None:intergenic
TGTTCCTGGGAAGGATCGAG+TGG 0.657402 5_4:+605459 Msa0828250:CDS
TTGAGAATATTATCCTGCGG+AGG 0.660187 5_4:-612723 None:intergenic
GATGAATGAGGAGTATGCCA+CGG 0.660383 5_4:-608204 None:intergenic
ACTCTGCCGTCAAGAAAGGG+AGG 0.660824 5_4:-610021 None:intergenic
CCAAGCTCAGCCATCCACTG+GGG 0.663464 5_4:-613392 None:intergenic
GACAAAGAAGATACCATCCA+CGG 0.665886 5_4:-612418 None:intergenic
TAGGCCAAAGGACCGAGCAG+AGG 0.666139 5_4:+612935 Msa0828250:CDS
TGGTGCACGCAAATGTATTG+TGG 0.670393 5_4:+612368 Msa0828250:CDS
TCATCCCTGTCATATCCAGA+AGG 0.671423 5_4:-607770 None:intergenic
AGGTGCTGTTAGAGGTACAG+AGG 0.677598 5_4:+609840 Msa0828250:CDS
GGGAGAGTCTCAAAGTGATG+GGG 0.678225 5_4:+606157 Msa0828250:CDS
GACCAGCTCGACCAGCACGC+TGG 0.678763 5_4:-612533 None:intergenic
GGTTCCCGTATGTATCAGCA+TGG 0.680356 5_4:-606758 None:intergenic
TGCTGAGACATCACTGACCG+TGG 0.682377 5_4:+612401 Msa0828250:CDS
GAAGGATCGAGTGGTTTACG+TGG 0.684126 5_4:+605468 Msa0828250:CDS
ATATATTACATAACAGCACA+AGG 0.684326 5_4:-613860 None:intergenic
TTTACAGTACATGACTGATG+GGG 0.684385 5_4:+611656 Msa0828250:intron
AGGAACATAGAGTCCACCAC+CGG 0.687678 5_4:-605443 None:intergenic
AAGATAAGGATGTCACCTGG+AGG 0.693509 5_4:-612180 None:intergenic
ATCTGTATCAGGAAAGCACG+TGG 0.694418 5_4:-613159 None:intergenic
GAACCAGAAAAGTCTACCGG+TGG 0.696177 5_4:+605427 Msa0828250:CDS
ATGATCATAGGAGTGAGAGG+AGG 0.696178 5_4:+607789 Msa0828250:CDS
AACCGTTCGACTGAGCGTAG+GGG 0.696590 5_4:+606777 Msa0828250:CDS
TGCCATAGAGAGCACTACTG+GGG 0.698776 5_4:-613286 None:intergenic
CAGTTGCATCACCGCCATGG+AGG 0.699224 5_4:+605259 Msa0828250:exon
CGAGTTAATTCTAACCACCA+AGG 0.705824 5_4:+613340 Msa0828250:CDS
TGAGGCGCCAACAAACATTG+GGG 0.713503 5_4:-608160 None:intergenic
GAATTGAGAATATTATCCTG+CGG 0.717287 5_4:-612726 None:intergenic
ATGCACGATTAGTTTCTCCG+TGG 0.725700 5_4:+608187 Msa0828250:CDS
TTCAAGGAGTGACAGCCGGG+AGG 0.730682 5_4:+607826 Msa0828250:CDS
TGGAAACAACACGATTACAG+AGG 0.731564 5_4:+613032 Msa0828250:CDS
AATGGGAAGATACTCCACGA+AGG 0.737464 5_4:+608097 Msa0828250:CDS
ACAATCGATAGCATGTACCA+GGG 0.750737 5_4:-612563 None:intergenic
GAACCCTAGAGATAGAAGGG+AGG 0.759400 5_4:-605086 None:intergenic
GTACATGCAATGTGCCACAG+CGG 0.769611 5_4:+613364 Msa0828250:CDS
GTGATGACTAACCTCCATGG+CGG 0.770058 5_4:-605270 None:intergenic
TTGCTGATAGAGATCCGGCG+CGG 0.810191 5_4:-605063 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTTTT+TGG + chr5_4:607326-607345 Msa0828250:intron 0.0%
!!! TATAGTTTTTTTTTTTTTGA+AGG - chr5_4:604968-604987 None:intergenic 10.0%
!! AAATATCAAAATTAGAAATA+TGG - chr5_4:607727-607746 None:intergenic 10.0%
!! TAAGATTATTATTATTATGA+AGG + chr5_4:608783-608802 Msa0828250:intron 10.0%
!!! TTTTGATATTTCAATTTTGA+AGG + chr5_4:607736-607755 Msa0828250:intron 15.0%
!! AGAAAAACAAATATGATATT+TGG - chr5_4:608249-608268 None:intergenic 15.0%
!!! TGGTTTATGTTTTTAATAAA+TGG + chr5_4:609366-609385 Msa0828250:intron 15.0%
!!! ATTTTGATTTTATATAAGGT+TGG - chr5_4:611500-611519 None:intergenic 15.0%
!! ATTGTTTGTCAATAGAAAAA+TGG + chr5_4:605358-605377 Msa0828250:intron 20.0%
!! AGATATTGTGATTAATTAGT+TGG + chr5_4:605887-605906 Msa0828250:intron 20.0%
!!! TTGCAATGTTTTACTTATAT+TGG + chr5_4:606002-606021 Msa0828250:intron 20.0%
!!! TTATTGTTTGTTTTAACGAA+TGG + chr5_4:606098-606117 Msa0828250:intron 20.0%
!! AAATTAGACTAACATGTATA+AGG + chr5_4:606533-606552 Msa0828250:intron 20.0%
!! AATTAGACTAACATGTATAA+GGG + chr5_4:606534-606553 Msa0828250:intron 20.0%
!!! ATACAACTTTTAGACTTTTA+AGG + chr5_4:607066-607085 Msa0828250:intron 20.0%
!!! CAATACAATATTTCTGTATT+TGG + chr5_4:607107-607126 Msa0828250:intron 20.0%
!! TAAATTGGAAGATAAAGAAA+AGG + chr5_4:607255-607274 Msa0828250:intron 20.0%
!! AAATTGGAAGATAAAGAAAA+GGG + chr5_4:607256-607275 Msa0828250:intron 20.0%
!!! TCTTATATGTTTTGAAGAAT+AGG + chr5_4:607353-607372 Msa0828250:intron 20.0%
!! CAAATATGATATTTGGAAAT+GGG - chr5_4:608242-608261 None:intergenic 20.0%
!! ACAAATATGATATTTGGAAA+TGG - chr5_4:608243-608262 None:intergenic 20.0%
!!! CATTAATAATTTTATTCCTC+AGG + chr5_4:608579-608598 Msa0828250:intron 20.0%
!! TGATAAAAAAATGACAAATG+CGG - chr5_4:610740-610759 None:intergenic 20.0%
!! TTTATTTATTTATGATGTGC+AGG + chr5_4:610937-610956 Msa0828250:intron 20.0%
!!! AACAACTTCATTTATCTTTT+TGG + chr5_4:611357-611376 Msa0828250:intron 20.0%
!! TTATCTTTATAGTATTCATG+AGG + chr5_4:611573-611592 Msa0828250:intron 20.0%
!!! AATTTTGATCTAAACTTTAG+TGG + chr5_4:611627-611646 Msa0828250:intron 20.0%
!! ATACCTATATTTGTCTAAAT+CGG - chr5_4:611709-611728 None:intergenic 20.0%
!!! TTAGTTTAGTTCAATCTAAT+TGG + chr5_4:612023-612042 Msa0828250:intron 20.0%
!!! TAGTTTAGTTCAATCTAATT+GGG + chr5_4:612024-612043 Msa0828250:intron 20.0%
!! ATTGTATAGAGTTAAATGAT+CGG - chr5_4:613000-613019 None:intergenic 20.0%
!!! ATTTACAAACCAAACTTTTT+TGG - chr5_4:613641-613660 None:intergenic 20.0%
!! CTGAAATATTTGTAAACTTA+TGG + chr5_4:613669-613688 Msa0828250:three_prime_UTR 20.0%
!! AAATATTTGTAAACTTATGG+AGG + chr5_4:613672-613691 Msa0828250:three_prime_UTR 20.0%
!!! AAAAGTATGAATTATTGAGT+TGG + chr5_4:613743-613762 Msa0828250:three_prime_UTR 20.0%
!!! ATTTGTACTTGAATTTGTTT+TGG + chr5_4:613835-613854 Msa0828250:three_prime_UTR 20.0%
!! ATATTACAAGTTTGAATAGA+TGG - chr5_4:613930-613949 None:intergenic 20.0%
!! ATTTATAAGTTGCTAAGTTT+AGG - chr5_4:613986-614005 None:intergenic 20.0%
!! TGGTTCTCAATTTTTGAATT+AGG + chr5_4:605145-605164 Msa0828250:intron 25.0%
!! GGTTCTCAATTTTTGAATTA+GGG + chr5_4:605146-605165 Msa0828250:intron 25.0%
! AGTGATATGATATATGATTG+AGG + chr5_4:605912-605931 Msa0828250:intron 25.0%
!!! GTTTTAACGAATGGTTTAAT+AGG + chr5_4:606107-606126 Msa0828250:intron 25.0%
!!! TGAATTTTAAGTCCACAATA+TGG - chr5_4:606481-606500 None:intergenic 25.0%
! TAAAATTCAAATCCTACTGA+TGG + chr5_4:606492-606511 Msa0828250:intron 25.0%
! AAAATTCAAATCCTACTGAT+GGG + chr5_4:606493-606512 Msa0828250:intron 25.0%
! AATGGAATTATGGAGTTAAA+GGG - chr5_4:606829-606848 None:intergenic 25.0%
! AAATGGAATTATGGAGTTAA+AGG - chr5_4:606830-606849 None:intergenic 25.0%
!!! ATTGTTTTTTCTAGAACAGA+AGG - chr5_4:606858-606877 None:intergenic 25.0%
! TGTTAATTGAATCAAAGTGT+TGG + chr5_4:607196-607215 Msa0828250:intron 25.0%
! CACTGTAAGCAAAATTAAAT+TGG + chr5_4:607240-607259 Msa0828250:intron 25.0%
!!! GAATTTTAACCAATCAAAGA+GGG - chr5_4:607537-607556 None:intergenic 25.0%
!!! TGAATTTTAACCAATCAAAG+AGG - chr5_4:607536-607555 None:intergenic 25.0%
!! TTGATTGGTTAAAATTCACA+TGG + chr5_4:607466-607485 Msa0828250:intron 25.0%
!! TGATTGGTTAAAATTCACAT+GGG + chr5_4:607467-607486 Msa0828250:intron 25.0%
!! TGATTGGTTAAAATTCACAT+GGG - chr5_4:607467-607486 None:intergenic 25.0%
!! TTGATTGGTTAAAATTCACA+TGG - chr5_4:607466-607485 None:intergenic 25.0%
!!! AGCAATATTTTTATGCTTTG+AGG - chr5_4:607590-607609 None:intergenic 25.0%
! ATTTATTCATTACACAGACT+AGG - chr5_4:607616-607635 None:intergenic 25.0%
! TTGACATTTCAATTTATTCC+TGG + chr5_4:607655-607674 Msa0828250:intron 25.0%
!!! TGTCATAATTGTTTCTATGT+CGG - chr5_4:607853-607872 None:intergenic 25.0%
! ATAGAAACAATTATGACAGT+AGG + chr5_4:607855-607874 Msa0828250:CDS 25.0%
! TAGAAACAATTATGACAGTA+GGG + chr5_4:607856-607875 Msa0828250:CDS 25.0%
! AACAATTACAATTACATACC+AGG - chr5_4:607971-607990 None:intergenic 25.0%
! GATACATACATGAGATATTA+TGG - chr5_4:608042-608061 None:intergenic 25.0%
! ACAAAAAACCTACATATGTT+AGG - chr5_4:608521-608540 None:intergenic 25.0%
!! TAATAATTTTATTCCTCAGG+AGG + chr5_4:608582-608601 Msa0828250:intron 25.0%
! CTACTTAAAACTATAATAGC+AGG - chr5_4:609004-609023 None:intergenic 25.0%
!!! CTGCTATTATAGTTTTAAGT+AGG + chr5_4:609002-609021 Msa0828250:intron 25.0%
! TCGAATAAAGTTGTTACATA+TGG + chr5_4:609032-609051 Msa0828250:intron 25.0%
! TGGAAGTTATAGATAATCAT+TGG + chr5_4:609052-609071 Msa0828250:intron 25.0%
! TTTAATATTGAACAGTGAAC+AGG + chr5_4:609096-609115 Msa0828250:intron 25.0%
! ACATCAACAAATTAATTGTC+TGG - chr5_4:609393-609412 None:intergenic 25.0%
! TTATAGCAGTATTTGCAATA+TGG + chr5_4:609549-609568 Msa0828250:intron 25.0%
!!! ATTTTGTTATCTCTATTCAC+AGG + chr5_4:609717-609736 Msa0828250:intron 25.0%
!! CAAGTTAATGTAGTTTGTAT+TGG + chr5_4:609943-609962 Msa0828250:intron 25.0%
!!! AGATGGTGAAATTGATTTTA+AGG + chr5_4:610364-610383 Msa0828250:CDS 25.0%
!! TTTTCAAATCACATGAAGAA+GGG + chr5_4:610398-610417 Msa0828250:CDS 25.0%
! TATCTGTGGCAATTATTTAT+TGG + chr5_4:610530-610549 Msa0828250:intron 25.0%
! TTATCTATCTGAATTATCTG+TGG + chr5_4:610631-610650 Msa0828250:intron 25.0%
! TTATGTTATCCAATCAAGAA+AGG + chr5_4:611065-611084 Msa0828250:intron 25.0%
!!! CACATGTTTTTGTTAGAAAT+AGG + chr5_4:611107-611126 Msa0828250:intron 25.0%
! AGGTAACTATGTTTATCAAA+TGG + chr5_4:611127-611146 Msa0828250:intron 25.0%
! ATCAAATGGAATTTGACATA+TGG + chr5_4:611141-611160 Msa0828250:intron 25.0%
! TCAAATGGAATTTGACATAT+GGG + chr5_4:611142-611161 Msa0828250:intron 25.0%
! TAACAGTATCTATATGAAGA+TGG + chr5_4:611171-611190 Msa0828250:intron 25.0%
!! AGTATATCAGTGATATGTTT+TGG + chr5_4:611393-611412 Msa0828250:intron 25.0%
!!! GATTTTATATAAGGTTGGTT+TGG - chr5_4:611495-611514 None:intergenic 25.0%
! CTTTCTTCAATATTCCAAAA+AGG - chr5_4:611872-611891 None:intergenic 25.0%
!! CAGAAATTTTCACATTTCTT+TGG + chr5_4:611948-611967 Msa0828250:CDS 25.0%
!! AATTTTCACATTTCTTTGGA+AGG + chr5_4:611952-611971 Msa0828250:CDS 25.0%
! ATAAGAAAGAATGTTAGATG+AGG - chr5_4:611989-612008 None:intergenic 25.0%
!! AGTTTAGTTCAATCTAATTG+GGG + chr5_4:612025-612044 Msa0828250:intron 25.0%
!! TTCCAATTTTTCATATTCCT+GGG + chr5_4:612061-612080 Msa0828250:CDS 25.0%
! CATTTCCTGTCAATATATTA+TGG + chr5_4:612088-612107 Msa0828250:CDS 25.0%
! TTACTCCATAATATATTGAC+AGG - chr5_4:612096-612115 None:intergenic 25.0%
! AGTTAGAGAGAGAAAATAAA+CGG + chr5_4:613534-613553 Msa0828250:CDS 25.0%
! ACTCGTTAAAATTGGAATTT+GGG - chr5_4:613717-613736 None:intergenic 25.0%
! TACTCGTTAAAATTGGAATT+TGG - chr5_4:613718-613737 None:intergenic 25.0%
!!! TTCCAATTTTAACGAGTAAT+CGG + chr5_4:613720-613739 Msa0828250:three_prime_UTR 25.0%
! ATATATTACATAACAGCACA+AGG - chr5_4:613863-613882 None:intergenic 25.0%
CTAAGAAGAAGATAGCATAA+TGG - chr5_4:605316-605335 None:intergenic 30.0%
AAACTAAGATTAGGTGGTTT+GGG + chr5_4:605748-605767 Msa0828250:intron 30.0%
! GACTTGTAGATTTTGTAGTA+AGG + chr5_4:605784-605803 Msa0828250:intron 30.0%
! GTTTCTCCTATAGTTTTTCT+AGG - chr5_4:605858-605877 None:intergenic 30.0%
TGATATATGATTGAGGATTG+TGG + chr5_4:605919-605938 Msa0828250:intron 30.0%
ATGTATAAGGGTAACTGTAA+AGG + chr5_4:606546-606565 Msa0828250:intron 30.0%
TCATCATTTCAGACAGATTA+AGG - chr5_4:606592-606611 None:intergenic 30.0%
! TTTGTGTGTGTGTTGAATTT+TGG + chr5_4:606649-606668 Msa0828250:intron 30.0%
! TGAGTCATGTGTTATTCAAA+TGG + chr5_4:606973-606992 Msa0828250:intron 30.0%
! GAGTCATGTGTTATTCAAAT+GGG + chr5_4:606974-606993 Msa0828250:intron 30.0%
! TTTCTTATGTCGCTTAGTTA+CGG - chr5_4:607135-607154 None:intergenic 30.0%
AAAAGTAACAGACTGATCTA+GGG - chr5_4:607299-607318 None:intergenic 30.0%
TAAAAGTAACAGACTGATCT+AGG - chr5_4:607300-607319 None:intergenic 30.0%
!!! ATCAGTCTGTTACTTTTAAG+TGG + chr5_4:607302-607321 Msa0828250:intron 30.0%
! AAGAATAGGAAGTATACATC+TGG + chr5_4:607367-607386 Msa0828250:intron 30.0%
! AGAATAGGAAGTATACATCT+GGG + chr5_4:607368-607387 Msa0828250:intron 30.0%
TTTATCAAGTAAAAACTGCC+AGG - chr5_4:607676-607695 None:intergenic 30.0%
!! TTAATCCAAGTATTGAAGAC+AGG + chr5_4:608011-608030 Msa0828250:intron 30.0%
ATATTCCTGTCTTCAATACT+TGG - chr5_4:608019-608038 None:intergenic 30.0%
AATAACATACAGGATGAATG+AGG - chr5_4:608219-608238 None:intergenic 30.0%
TCATCATCAGAGTCAAATAT+AGG - chr5_4:608298-608317 None:intergenic 30.0%
!! ATCTGAGTTTTCTGAAGAAA+AGG - chr5_4:608478-608497 None:intergenic 30.0%
AGAAAACTCAGATACATATG+AGG + chr5_4:608485-608504 Msa0828250:CDS 30.0%
! ATTTTGCACCTAACATATGT+AGG + chr5_4:608510-608529 Msa0828250:intron 30.0%
AATAGCAGATAAATCTGACT+TGG + chr5_4:608606-608625 Msa0828250:CDS 30.0%
ATAGCAGATAAATCTGACTT+GGG + chr5_4:608607-608626 Msa0828250:CDS 30.0%
ACTAAATTACATACCATGCT+CGG - chr5_4:608693-608712 None:intergenic 30.0%
TCTTCAGTATTTGATACATG+TGG + chr5_4:608738-608757 Msa0828250:intron 30.0%
! ATTATGAAGGTATGATAGAG+AGG + chr5_4:608796-608815 Msa0828250:intron 30.0%
AAAACTATAATAGCAGGAAG+AGG - chr5_4:608998-609017 None:intergenic 30.0%
!! ATAGATAATCATTGGCCTTA+AGG + chr5_4:609060-609079 Msa0828250:intron 30.0%
CTATATTTGACATGATAGCA+TGG + chr5_4:609121-609140 Msa0828250:intron 30.0%
ATCAATCAGAAGGAACATAA+TGG - chr5_4:609224-609243 None:intergenic 30.0%
TGTTCCTTCTGATTGATATT+TGG + chr5_4:609227-609246 Msa0828250:intron 30.0%
TAAGGATATGGACAAATCAT+AGG - chr5_4:609261-609280 None:intergenic 30.0%
! TTTTCTGTATCCAATTCCAA+TGG + chr5_4:609416-609435 Msa0828250:intron 30.0%
!!! TCAACTCGTGTTCTTTTTTA+TGG + chr5_4:609440-609459 Msa0828250:intron 30.0%
AGCAACAATAAGAAACTATG+TGG - chr5_4:609587-609606 None:intergenic 30.0%
!!! GCACATTATTTTAAGCAAGT+TGG + chr5_4:609659-609678 Msa0828250:intron 30.0%
!! CAATTTCTTGCTTTGAGAAA+GGG - chr5_4:609767-609786 None:intergenic 30.0%
!! ACAATTTCTTGCTTTGAGAA+AGG - chr5_4:609768-609787 None:intergenic 30.0%
!! CTACATTAACTTGTCAAAGT+TGG - chr5_4:609936-609955 None:intergenic 30.0%
! GGATCTTTTATTGGCATAAT+AGG - chr5_4:610069-610088 None:intergenic 30.0%
! TCAGATGTTGGATCTTTTAT+TGG - chr5_4:610078-610097 None:intergenic 30.0%
TGCTTACTCTCTTCATAATT+TGG + chr5_4:610270-610289 Msa0828250:intron 30.0%
!! TGGTGAAATTGATTTTAAGG+AGG + chr5_4:610367-610386 Msa0828250:CDS 30.0%
! GTTTTCAAATCACATGAAGA+AGG + chr5_4:610397-610416 Msa0828250:CDS 30.0%
! GTTTTTCTCTGTTTTATCTG+TGG + chr5_4:610516-610535 Msa0828250:intron 30.0%
TATCACACTCAGTTTAAATC+TGG + chr5_4:610563-610582 Msa0828250:intron 30.0%
AAAAAAATGACAAATGCGGT+CGG - chr5_4:610736-610755 None:intergenic 30.0%
ATAACTAACAGGGTGAAATA+AGG - chr5_4:610790-610809 None:intergenic 30.0%
ATTCCAATGCATAACTAACA+GGG - chr5_4:610800-610819 None:intergenic 30.0%
TATTCCAATGCATAACTAAC+AGG - chr5_4:610801-610820 None:intergenic 30.0%
!!! GTTTTTTCTCCTTTCTTGAT+TGG - chr5_4:611077-611096 None:intergenic 30.0%
CAAATGGAATTTGACATATG+GGG + chr5_4:611143-611162 Msa0828250:intron 30.0%
TATGAAGATGGCTATACTAT+TGG + chr5_4:611183-611202 Msa0828250:CDS 30.0%
TTCACCTTTATTACGGTATT+TGG - chr5_4:611339-611358 None:intergenic 30.0%
GAAGTTGTTCACCTTTATTA+CGG - chr5_4:611346-611365 None:intergenic 30.0%
!! ATATCAGTGATATGTTTTGG+TGG + chr5_4:611396-611415 Msa0828250:intron 30.0%
!! TTTATATAAGGTTGGTTTGG+TGG - chr5_4:611492-611511 None:intergenic 30.0%
TCTTTATAGTATTCATGAGG+TGG + chr5_4:611576-611595 Msa0828250:intron 30.0%
CTTTATAGTATTCATGAGGT+GGG + chr5_4:611577-611596 Msa0828250:intron 30.0%
! ATTTTACAGTACATGACTGA+TGG + chr5_4:611654-611673 Msa0828250:intron 30.0%
! TTTTACAGTACATGACTGAT+GGG + chr5_4:611655-611674 Msa0828250:intron 30.0%
ACTCCGATTTAGACAAATAT+AGG + chr5_4:611703-611722 Msa0828250:CDS 30.0%
AAACAAACAACAATGAGACA+TGG - chr5_4:611755-611774 None:intergenic 30.0%
AAACAATGTTACCAATCATC+TGG + chr5_4:611782-611801 Msa0828250:intron 30.0%
! GTTCCAATTTTTCATATTCC+TGG + chr5_4:612060-612079 Msa0828250:CDS 30.0%
ATGGGAAGAATCAAAAGTTT+CGG - chr5_4:612294-612313 None:intergenic 30.0%
ATATTTCAGAAAGCTGAAGA+TGG + chr5_4:612348-612367 Msa0828250:CDS 30.0%
TGCTTACCTAAATGAAATGT+TGG + chr5_4:612596-612615 Msa0828250:CDS 30.0%
! TTTACTCGACTTTGATTTCA+TGG + chr5_4:612695-612714 Msa0828250:CDS 30.0%
GAATTGAGAATATTATCCTG+CGG - chr5_4:612729-612748 None:intergenic 30.0%
!! TTTTGATGGGTGAAAAGTTA+GGG + chr5_4:612856-612875 Msa0828250:CDS 30.0%
TATACAATGTCTATCAGCAA+TGG + chr5_4:613012-613031 Msa0828250:CDS 30.0%
!!! GACCATTTTTTGCATGTTAA+AGG + chr5_4:613068-613087 Msa0828250:CDS 30.0%
GACCTTTAACATGCAAAAAA+TGG - chr5_4:613073-613092 None:intergenic 30.0%
TTTCTAACTACATCTGTATC+AGG - chr5_4:613173-613192 None:intergenic 30.0%
GGAAATGGAGAATTTAAAGA+AGG + chr5_4:613502-613521 Msa0828250:CDS 30.0%
TTCCATTCCAGGTTTAAAAA+AGG + chr5_4:613595-613614 Msa0828250:CDS 30.0%
TCCATTCCAGGTTTAAAAAA+GGG + chr5_4:613596-613615 Msa0828250:CDS 30.0%
TTCTTGAGACCAAAAAAGTT+TGG + chr5_4:613629-613648 Msa0828250:CDS 30.0%
TTCCGATTACTCGTTAAAAT+TGG - chr5_4:613725-613744 None:intergenic 30.0%
! TGTTGAAGATGAATTTTCTC+CGG + chr5_4:613766-613785 Msa0828250:three_prime_UTR 30.0%
GTTAGAAAGAAGAAATGCAT+CGG + chr5_4:613893-613912 Msa0828250:three_prime_UTR 30.0%
AGTTTGAATAGATGGCAATT+TGG - chr5_4:613922-613941 None:intergenic 30.0%
AACATCCTTCTTCTCTATTG+TGG + chr5_4:605109-605128 Msa0828250:five_prime_UTR 35.0%
! ATTGTGGTACGATTTCGTTT+TGG + chr5_4:605125-605144 Msa0828250:intron 35.0%
AAACAAGACTACAATGACGT+TGG + chr5_4:605405-605424 Msa0828250:CDS 35.0%
CTACGCTAAAAAAACTGTGT+CGG - chr5_4:605619-605638 None:intergenic 35.0%
! CAAAGATGATGATGTTGCAT+TGG + chr5_4:605639-605658 Msa0828250:intron 35.0%
ATGACAATGTTAGAGAGAGT+TGG + chr5_4:605696-605715 Msa0828250:intron 35.0%
TGACAATGTTAGAGAGAGTT+GGG + chr5_4:605697-605716 Msa0828250:intron 35.0%
! TTAGTTTCCACCATCTTTTC+TGG - chr5_4:605735-605754 None:intergenic 35.0%
!! AGATGGTGGAAACTAAGATT+AGG + chr5_4:605739-605758 Msa0828250:intron 35.0%
GAAACTAAGATTAGGTGGTT+TGG + chr5_4:605747-605766 Msa0828250:intron 35.0%
AGTAAGGAGAGTAGATTAGA+TGG + chr5_4:605800-605819 Msa0828250:intron 35.0%
AGTCAATTCACTATAGAGAC+AGG + chr5_4:605828-605847 Msa0828250:intron 35.0%
GGTAGACCTAGAAAAACTAT+AGG + chr5_4:605849-605868 Msa0828250:intron 35.0%
CTAATCCAACTAAGTAGGTT+CGG - chr5_4:605964-605983 None:intergenic 35.0%
! ATCGAAGTGGTTATCTCTTT+TGG - chr5_4:606194-606213 None:intergenic 35.0%
GCTCGTAACATATTTGCAAA+AGG - chr5_4:606372-606391 None:intergenic 35.0%
GCAAATATGTTACGAGCATT+TGG + chr5_4:606375-606394 Msa0828250:intron 35.0%
AGAGTACATTTCAACCTTGT+TGG + chr5_4:606451-606470 Msa0828250:intron 35.0%
!!! TTTTTCTAGAACAGAAGGCA+CGG - chr5_4:606853-606872 None:intergenic 35.0%
! TGCCAGCATGAAGTAAATTT+TGG + chr5_4:606950-606969 Msa0828250:intron 35.0%
CACCAAAATTTACTTCATGC+TGG - chr5_4:606955-606974 None:intergenic 35.0%
TTCATTAACTAGTGCCCTAT+GGG - chr5_4:607018-607037 None:intergenic 35.0%
ATTCATTAACTAGTGCCCTA+TGG - chr5_4:607019-607038 None:intergenic 35.0%
!! TTGAATCAAAGTGTTGGACT+TGG + chr5_4:607202-607221 Msa0828250:intron 35.0%
ATGTGGGTCCCATATAAATT+TGG - chr5_4:607498-607517 None:intergenic 35.0%
TATATGGGACCCACATAATT+TGG + chr5_4:607502-607521 Msa0828250:intron 35.0%
TTCAACACACACTCTTTGAT+TGG - chr5_4:607549-607568 None:intergenic 35.0%
AGAAAGCGAAACAGATATGA+AGG + chr5_4:607932-607951 Msa0828250:CDS 35.0%
GAAACAGATATGAAGGTTCA+AGG + chr5_4:607939-607958 Msa0828250:CDS 35.0%
TATCTCATGTATGTATCTGC+AGG + chr5_4:608045-608064 Msa0828250:intron 35.0%
TGGAAATGGGAATAACATAC+AGG - chr5_4:608229-608248 None:intergenic 35.0%
TAGATAATTCACCTTCTCCT+TGG + chr5_4:608358-608377 Msa0828250:intron 35.0%
AGATAATTCACCTTCTCCTT+GGG + chr5_4:608359-608378 Msa0828250:intron 35.0%
TCAGTCAAATCTTCTGTTTC+TGG + chr5_4:608426-608445 Msa0828250:CDS 35.0%
!! CTGTTTCTGGATATAATCGA+AGG + chr5_4:608439-608458 Msa0828250:CDS 35.0%
!!! GATAGCTCTTCACTTTTTCT+TGG + chr5_4:608842-608861 Msa0828250:CDS 35.0%
!!! TTCACTTTTTCTTGGAGATG+AGG + chr5_4:608850-608869 Msa0828250:CDS 35.0%
GGCTTCATTTCAGAAAAAAG+AGG + chr5_4:608871-608890 Msa0828250:CDS 35.0%
AATCAAGCACATACAAGTGA+AGG - chr5_4:608958-608977 None:intergenic 35.0%
AAATATACCAGCTCTCCTTA+AGG - chr5_4:609078-609097 None:intergenic 35.0%
TGGTCCAAATATCAATCAGA+AGG - chr5_4:609234-609253 None:intergenic 35.0%
ATGGACAAATCATAGGTAAC+TGG - chr5_4:609254-609273 None:intergenic 35.0%
!! GTCCATATCCTTAGTTTTTG+TGG + chr5_4:609268-609287 Msa0828250:intron 35.0%
CACCACAAAAACTAAGGATA+TGG - chr5_4:609273-609292 None:intergenic 35.0%
!! CATATCCTTAGTTTTTGTGG+TGG + chr5_4:609271-609290 Msa0828250:intron 35.0%
!!! CGTGTTCTTTTTTATGGAGT+TGG + chr5_4:609446-609465 Msa0828250:intron 35.0%
TAACTCAACCCTACAAATGT+GGG - chr5_4:609486-609505 None:intergenic 35.0%
TCAAAGCATGTCTTAGAACT+GGG - chr5_4:609517-609536 None:intergenic 35.0%
! GTACAAAGTGTTCAGTGTAT+TGG + chr5_4:609635-609654 Msa0828250:intron 35.0%
! TTACAGCTGATAATGCTCAA+TGG + chr5_4:609794-609813 Msa0828250:CDS 35.0%
! TACAGCTGATAATGCTCAAT+GGG + chr5_4:609795-609814 Msa0828250:CDS 35.0%
ATAATGCTCAATGGGAAGAT+CGG + chr5_4:609803-609822 Msa0828250:CDS 35.0%
!! TCAGACTGAATTTGATGATG+AGG + chr5_4:609864-609883 Msa0828250:CDS 35.0%
CTTTGTATCTGTGATCAACA+TGG - chr5_4:610001-610020 None:intergenic 35.0%
AAAAGATCCAACATCTGACA+TGG + chr5_4:610080-610099 Msa0828250:CDS 35.0%
ATTAAAGCCATGTCAGATGT+TGG - chr5_4:610090-610109 None:intergenic 35.0%
!! ATGGCTTTAATTTCTCGCAA+AGG + chr5_4:610099-610118 Msa0828250:CDS 35.0%
TCAAAACTTGGCGATATCTT+AGG + chr5_4:610198-610217 Msa0828250:CDS 35.0%
TCTTCTCGCACTGAAAAAAT+AGG - chr5_4:610482-610501 None:intergenic 35.0%
TCTATCTGAATTATCTGTGG+AGG + chr5_4:610634-610653 Msa0828250:intron 35.0%
TGAAATAAGGAAAAGGGACT+TGG - chr5_4:610777-610796 None:intergenic 35.0%
ACAGGGTGAAATAAGGAAAA+GGG - chr5_4:610783-610802 None:intergenic 35.0%
AACAGGGTGAAATAAGGAAA+AGG - chr5_4:610784-610803 None:intergenic 35.0%
! ACATTTTTATCTGCCTGTGT+TGG + chr5_4:610831-610850 Msa0828250:intron 35.0%
ATGAAATGAGAAACCAACAC+AGG - chr5_4:610847-610866 None:intergenic 35.0%
AAAAACAACCCAATTGACAC+AGG + chr5_4:611009-611028 Msa0828250:CDS 35.0%
ACAACAAACCTGTGTCAATT+GGG - chr5_4:611020-611039 None:intergenic 35.0%
TATACTATTGGCGGTATAGT+AGG + chr5_4:611195-611214 Msa0828250:CDS 35.0%
TGGACCAAATACCGTAATAA+AGG + chr5_4:611332-611351 Msa0828250:CDS 35.0%
TTTACAGTACATGACTGATG+GGG + chr5_4:611656-611675 Msa0828250:intron 35.0%
ACAGTTTCAAACCAGATGAT+TGG - chr5_4:611796-611815 None:intergenic 35.0%
! ATCTGGTTTGAAACTGTTTC+AGG + chr5_4:611799-611818 Msa0828250:intron 35.0%
! TCTGGTTTGAAACTGTTTCA+GGG + chr5_4:611800-611819 Msa0828250:intron 35.0%
TGTGCTTAATGACCTTTCAT+GGG - chr5_4:611844-611863 None:intergenic 35.0%
! TTAAGCACAGATGTCCTTTT+TGG + chr5_4:611855-611874 Msa0828250:CDS 35.0%
TGACAATCAGCTTGAAATCA+CGG - chr5_4:611908-611927 None:intergenic 35.0%
TGAAAAATTGGAACACTGCA+AGG - chr5_4:612054-612073 None:intergenic 35.0%
CTCCCAGGAATATGAAAAAT+TGG - chr5_4:612066-612085 None:intergenic 35.0%
CCTTCAACATAATCTTCAAC+TGG - chr5_4:612123-612142 None:intergenic 35.0%
CCAGTTGAAGATTATGTTGA+AGG + chr5_4:612120-612139 Msa0828250:CDS 35.0%
TGGGAAGAATCAAAAGTTTC+GGG - chr5_4:612293-612312 None:intergenic 35.0%
TGATGTCTCAGCAATATTAG+TGG - chr5_4:612394-612413 None:intergenic 35.0%
ATCTTCTTTGTCATAGACAC+AGG + chr5_4:612429-612448 Msa0828250:CDS 35.0%
! AGGTTAGTTCTTTGAATCTC+TGG - chr5_4:612633-612652 None:intergenic 35.0%
GAGATTCAAAGAACTAACCT+TGG + chr5_4:612633-612652 Msa0828250:CDS 35.0%
TCAATTCTATGTACCAGTTG+TGG + chr5_4:612742-612761 Msa0828250:CDS 35.0%
CAATTCTATGTACCAGTTGT+GGG + chr5_4:612743-612762 Msa0828250:CDS 35.0%
!! CTTTTGATGGGTGAAAAGTT+AGG + chr5_4:612855-612874 Msa0828250:CDS 35.0%
! CAGTACCATCTGTTTTCTTT+AGG + chr5_4:612916-612935 Msa0828250:CDS 35.0%
TTTGGCCTAAAGAAAACAGA+TGG - chr5_4:612924-612943 None:intergenic 35.0%
! ATCTGTTTTCTTTAGGCCAA+AGG + chr5_4:612923-612942 Msa0828250:CDS 35.0%
AGAGTTAAATGATCGGATTC+TGG - chr5_4:612993-613012 None:intergenic 35.0%
GCATGTTAAAGGTCTAAGAA+AGG + chr5_4:613079-613098 Msa0828250:CDS 35.0%
CACAATTCAGCAAGACTAAA+GGG + chr5_4:613215-613234 Msa0828250:CDS 35.0%
TCGTGATAAACCACATAATC+AGG - chr5_4:613323-613342 None:intergenic 35.0%
TCCTTCACAGAGAAAAACAT+GGG - chr5_4:613419-613438 None:intergenic 35.0%
GAAACAGAAACGAGAGAAAA+CGG + chr5_4:613469-613488 Msa0828250:CDS 35.0%
AGAGAGAGAAAATAAACGGA+AGG + chr5_4:613538-613557 Msa0828250:CDS 35.0%
AGAAAATAAACGGAAGGAGA+AGG + chr5_4:613544-613563 Msa0828250:CDS 35.0%
!!! ACCCTTTTTTAAACCTGGAA+TGG - chr5_4:613600-613619 None:intergenic 35.0%
!!! GAAGAACCCTTTTTTAAACC+TGG - chr5_4:613605-613624 None:intergenic 35.0%
!!! CTTTTTTGGTCTCAAGAATG+TGG - chr5_4:613627-613646 None:intergenic 35.0%
TTTGTAAACTTATGGAGGAG+AGG + chr5_4:613677-613696 Msa0828250:three_prime_UTR 35.0%
TTGTAAACTTATGGAGGAGA+GGG + chr5_4:613678-613697 Msa0828250:three_prime_UTR 35.0%
GTTGAACCCTAGAGATAGAA+GGG - chr5_4:605092-605111 None:intergenic 40.0%
TGTTGAACCCTAGAGATAGA+AGG - chr5_4:605093-605112 None:intergenic 40.0%
TCGTACCACAATAGAGAAGA+AGG - chr5_4:605117-605136 None:intergenic 40.0%
ATAGTGATGACTAACCTCCA+TGG - chr5_4:605276-605295 None:intergenic 40.0%
TTGGAACCAGAAAAGTCTAC+CGG + chr5_4:605424-605443 Msa0828250:CDS 40.0%
TGTGTCTCATACAACATAGC+TGG - chr5_4:605578-605597 None:intergenic 40.0%
TGTTGTATGAGACACAGTGT+TGG + chr5_4:605582-605601 Msa0828250:intron 40.0%
GTTGTATGAGACACAGTGTT+GGG + chr5_4:605583-605602 Msa0828250:intron 40.0%
GGATGTGTAGTAAGACTAGA+CGG + chr5_4:605660-605679 Msa0828250:intron 40.0%
GATGTGTAGTAAGACTAGAC+GGG + chr5_4:605661-605680 Msa0828250:intron 40.0%
GACAATGTTAGAGAGAGTTG+GGG + chr5_4:605698-605717 Msa0828250:intron 40.0%
!! TCCACCATCTTTTCTGGTAT+AGG - chr5_4:605729-605748 None:intergenic 40.0%
TGGTGGAAACTAAGATTAGG+TGG + chr5_4:605742-605761 Msa0828250:intron 40.0%
AAGGAGAGTAGATTAGATGG+AGG + chr5_4:605803-605822 Msa0828250:intron 40.0%
AGGAGAGTAGATTAGATGGA+GGG + chr5_4:605804-605823 Msa0828250:intron 40.0%
CGAACCTACTTAGTTGGATT+AGG + chr5_4:605962-605981 Msa0828250:intron 40.0%
CAAGCCTAATCCAACTAAGT+AGG - chr5_4:605969-605988 None:intergenic 40.0%
! CTACTTAGTTGGATTAGGCT+TGG + chr5_4:605967-605986 Msa0828250:intron 40.0%
ATACCCTTGCCATTGCAAAA+CGG + chr5_4:606135-606154 Msa0828250:CDS 40.0%
ACTTTCCTCAACAACATCAG+AGG - chr5_4:606252-606271 None:intergenic 40.0%
TCTGATGTTGTTGAGGAAAG+TGG + chr5_4:606251-606270 Msa0828250:CDS 40.0%
CTGATGTTGTTGAGGAAAGT+GGG + chr5_4:606252-606271 Msa0828250:CDS 40.0%
CACAATATGGACATCCAACA+AGG - chr5_4:606468-606487 None:intergenic 40.0%
CTTGTTGGATGTCCATATTG+TGG + chr5_4:606466-606485 Msa0828250:intron 40.0%
ATTAACTCATGCCCATCAGT+AGG - chr5_4:606507-606526 None:intergenic 40.0%
TGTATCAGCATGGTGATCTT+CGG - chr5_4:606751-606770 None:intergenic 40.0%
GATCACCATGCTGATACATA+CGG + chr5_4:606753-606772 Msa0828250:CDS 40.0%
ATCACCATGCTGATACATAC+GGG + chr5_4:606754-606773 Msa0828250:CDS 40.0%
AAGGCACGGAAATGGAATTA+TGG - chr5_4:606839-606858 None:intergenic 40.0%
CAACATAGAGCAGACATGTT+GGG - chr5_4:607170-607189 None:intergenic 40.0%
ACAACATAGAGCAGACATGT+TGG - chr5_4:607171-607190 None:intergenic 40.0%
!! GGAAGTATACATCTGGGTTT+TGG + chr5_4:607374-607393 Msa0828250:intron 40.0%
TTCAACACACCCTCTTTGAT+TGG + chr5_4:607451-607470 Msa0828250:intron 40.0%
TGGGACCCACCAAATTTATA+TGG + chr5_4:607486-607505 Msa0828250:intron 40.0%
GGGACCCACCAAATTTATAT+GGG + chr5_4:607487-607506 Msa0828250:intron 40.0%
GGGTCCCATATAAATTTGGT+GGG - chr5_4:607494-607513 None:intergenic 40.0%
TGGGTCCCATATAAATTTGG+TGG - chr5_4:607495-607514 None:intergenic 40.0%
TTCACCTTCTGGATATGACA+GGG + chr5_4:607766-607785 Msa0828250:CDS 40.0%
GATATGACAGGGATGATCAT+AGG + chr5_4:607777-607796 Msa0828250:CDS 40.0%
!! TTATCTGCTATTTCCTCCTG+AGG - chr5_4:608598-608617 None:intergenic 40.0%
! TGAAGGTATGATAGAGAGGA+AGG + chr5_4:608800-608819 Msa0828250:intron 40.0%
! CCTAGAAGTTACCAGTCTTT+TGG - chr5_4:608906-608925 None:intergenic 40.0%
CCAAAAGACTGGTAACTTCT+AGG + chr5_4:608903-608922 Msa0828250:intron 40.0%
GCTTACCACCACAAAAACTA+AGG - chr5_4:609279-609298 None:intergenic 40.0%
TAACATGTAGCCTACCAACA+TGG + chr5_4:609314-609333 Msa0828250:intron 40.0%
AACATGTAGCCTACCAACAT+GGG + chr5_4:609315-609334 Msa0828250:intron 40.0%
GAGTGATTGGCATTTGAATC+TGG + chr5_4:609346-609365 Msa0828250:intron 40.0%
! ATGGAGTTGGTCTGTGATTT+AGG + chr5_4:609459-609478 Msa0828250:intron 40.0%
! TGGAGTTGGTCTGTGATTTA+GGG + chr5_4:609460-609479 Msa0828250:intron 40.0%
! ATTTAGGGCCCACATTTGTA+GGG + chr5_4:609475-609494 Msa0828250:intron 40.0%
CTAACTCAACCCTACAAATG+TGG - chr5_4:609487-609506 None:intergenic 40.0%
CACATTTGTAGGGTTGAGTT+AGG + chr5_4:609485-609504 Msa0828250:intron 40.0%
CATGTCTTAGAACTGGGATT+GGG - chr5_4:609511-609530 None:intergenic 40.0%
GTCAAAGCATGTCTTAGAAC+TGG - chr5_4:609518-609537 None:intergenic 40.0%
ACATCTTAGTCCCATCTCTT+CGG - chr5_4:609744-609763 None:intergenic 40.0%
AAGGTCATTCTTCTTGTGCA+CGG + chr5_4:609895-609914 Msa0828250:CDS 40.0%
CAGAGTTGTTTATACCAAGC+AGG + chr5_4:610038-610057 Msa0828250:CDS 40.0%
TATTCGAACTCTGCTTCTCA+TGG - chr5_4:610146-610165 None:intergenic 40.0%
CGTTGAAAAAACAGCAGAAC+AGG + chr5_4:610221-610240 Msa0828250:CDS 40.0%
CAAAAACTCTTGCTGAGCAA+AGG + chr5_4:610447-610466 Msa0828250:CDS 40.0%
AGTGCGAGAAGAGTTATTAC+AGG + chr5_4:610490-610509 Msa0828250:CDS 40.0%
CGAGAAGAGTTATTACAGGT+TGG + chr5_4:610494-610513 Msa0828250:intron 40.0%
ATCTGAATTATCTGTGGAGG+AGG + chr5_4:610637-610656 Msa0828250:intron 40.0%
AATTATCTGTGGAGGAGGAA+TGG + chr5_4:610642-610661 Msa0828250:intron 40.0%
ATTATCTGTGGAGGAGGAAT+GGG + chr5_4:610643-610662 Msa0828250:intron 40.0%
TTTCCCAGTGATCAAGTACT+AGG + chr5_4:610699-610718 Msa0828250:intron 40.0%
CAACCTAGTACTTGATCACT+GGG - chr5_4:610705-610724 None:intergenic 40.0%
ACAACCTAGTACTTGATCAC+TGG - chr5_4:610706-610725 None:intergenic 40.0%
TCACCCTGTTAGTTATGCAT+TGG + chr5_4:610794-610813 Msa0828250:intron 40.0%
! GATTCGAGAAAATCAGGTTG+TGG + chr5_4:610961-610980 Msa0828250:CDS 40.0%
! AATCAGGTTGTGGTTGTAGT+TGG + chr5_4:610971-610990 Msa0828250:CDS 40.0%
! ATCAGGTTGTGGTTGTAGTT+GGG + chr5_4:610972-610991 Msa0828250:CDS 40.0%
GACAACAAACCTGTGTCAAT+TGG - chr5_4:611021-611040 None:intergenic 40.0%
GAAGATGGCTATACTATTGG+CGG + chr5_4:611186-611205 Msa0828250:CDS 40.0%
ACAGAGTTGGGAGATAAAGT+TGG + chr5_4:611282-611301 Msa0828250:CDS 40.0%
! TGGCTATGCTATACGTTTTG+AGG + chr5_4:611302-611321 Msa0828250:CDS 40.0%
!!! ATACGTTTTGAGGATGTGAC+TGG + chr5_4:611312-611331 Msa0828250:CDS 40.0%
AGTTAAGAAGCGGAGTGATA+AGG - chr5_4:611440-611459 None:intergenic 40.0%
GGGCATGCATTGTAATTATG+TGG + chr5_4:611597-611616 Msa0828250:intron 40.0%
CAAACAACAATGAGACATGG+AGG - chr5_4:611752-611771 None:intergenic 40.0%
CTGTTTCAGGGTTATTGTGA+TGG + chr5_4:611812-611831 Msa0828250:intron 40.0%
CTGTGCTTAATGACCTTTCA+TGG - chr5_4:611845-611864 None:intergenic 40.0%
ATGAAGATAAGGATGTCACC+TGG - chr5_4:612186-612205 None:intergenic 40.0%
GACATCCTTATCTTCATGAC+TGG + chr5_4:612189-612208 Msa0828250:CDS 40.0%
TCCCATATATTCTCAGCTTC+CGG + chr5_4:612308-612327 Msa0828250:CDS 40.0%
GACAAAGAAGATACCATCCA+CGG - chr5_4:612421-612440 None:intergenic 40.0%
TTTGTCATAGACACAGGCTA+TGG + chr5_4:612435-612454 Msa0828250:CDS 40.0%
CACAGGCTATGGTAAAATGA+AGG + chr5_4:612446-612465 Msa0828250:CDS 40.0%
AAGGTGTACAACCCTAGAAT+GGG + chr5_4:612465-612484 Msa0828250:CDS 40.0%
ACAATCGATAGCATGTACCA+GGG - chr5_4:612566-612585 None:intergenic 40.0%
TACAATCGATAGCATGTACC+AGG - chr5_4:612567-612586 None:intergenic 40.0%
! GACTGGCCAACATTTCATTT+AGG - chr5_4:612605-612624 None:intergenic 40.0%
!! GTTCTTTGAATCTCTGGAAC+AGG - chr5_4:612627-612646 None:intergenic 40.0%
AAGAACTAACCTTGGCAATG+TGG + chr5_4:612641-612660 Msa0828250:CDS 40.0%
TTGAGAATATTATCCTGCGG+AGG - chr5_4:612726-612745 None:intergenic 40.0%
GAAAATGGTTGAGTTTCCAC+TGG + chr5_4:612812-612831 Msa0828250:CDS 40.0%
!! TTCACCCATCAAAAGCATCT+TGG - chr5_4:612850-612869 None:intergenic 40.0%
! TGAAAAGTTAGGGTGTCTTG+AGG + chr5_4:612866-612885 Msa0828250:CDS 40.0%
! AACAGATGGTACTGAAAGCA+TGG - chr5_4:612910-612929 None:intergenic 40.0%
TGGAAACAACACGATTACAG+AGG + chr5_4:613032-613051 Msa0828250:CDS 40.0%
AACACGATTACAGAGGTGAT+TGG + chr5_4:613039-613058 Msa0828250:CDS 40.0%
CTTGAGAATATCAAGCAGCT+GGG - chr5_4:613120-613139 None:intergenic 40.0%
TCTTGAGAATATCAAGCAGC+TGG - chr5_4:613121-613140 None:intergenic 40.0%
!! CCTTTAGTCTTGCTGAATTG+TGG - chr5_4:613217-613236 None:intergenic 40.0%
CCACAATTCAGCAAGACTAA+AGG + chr5_4:613214-613233 Msa0828250:CDS 40.0%
AGTATGTTAACACCCGGAAT+GGG + chr5_4:613246-613265 Msa0828250:CDS 40.0%
CGAGTTAATTCTAACCACCA+AGG + chr5_4:613340-613359 Msa0828250:CDS 40.0%
! ACCCATGTTTTTCTCTGTGA+AGG + chr5_4:613415-613434 Msa0828250:CDS 40.0%
CTCCTTCACAGAGAAAAACA+TGG - chr5_4:613420-613439 None:intergenic 40.0%
AACGGAAGGAGAAGGAAAAA+AGG + chr5_4:613552-613571 Msa0828250:CDS 40.0%
ACGGAAGGAGAAGGAAAAAA+GGG + chr5_4:613553-613572 Msa0828250:CDS 40.0%
CGGTGGATAATGAAACAGGA+TGG - chr5_4:605046-605065 None:intergenic 45.0%
CAACCTCCCTTCTATCTCTA+GGG + chr5_4:605083-605102 Msa0828250:five_prime_UTR 45.0%
ACCGGAGAGAAAATCTCGTT+TGG + chr5_4:605492-605511 Msa0828250:CDS 45.0%
! CCCAAACGAGATTTTCTCTC+CGG - chr5_4:605496-605515 None:intergenic 45.0%
CCGGAGAGAAAATCTCGTTT+GGG + chr5_4:605493-605512 Msa0828250:CDS 45.0%
! CATACAACATAGCTGGTCTC+TGG - chr5_4:605571-605590 None:intergenic 45.0%
GTAGTAAGACTAGACGGGAT+AGG + chr5_4:605666-605685 Msa0828250:intron 45.0%
AGCGCCTATACCAGAAAAGA+TGG + chr5_4:605722-605741 Msa0828250:intron 45.0%
GCCTATACCAGAAAAGATGG+TGG + chr5_4:605725-605744 Msa0828250:intron 45.0%
ACTAAGTAGGTTCGGCTACA+TGG - chr5_4:605956-605975 None:intergenic 45.0%
TGTAGCCGAACCTACTTAGT+TGG + chr5_4:605956-605975 Msa0828250:intron 45.0%
TACCCTTGCCATTGCAAAAC+GGG + chr5_4:606136-606155 Msa0828250:CDS 45.0%
! TCAAAGTGATGGGGCATTCA+AGG + chr5_4:606166-606185 Msa0828250:CDS 45.0%
TGAGTCCTCTGATGTTGTTG+AGG + chr5_4:606244-606263 Msa0828250:CDS 45.0%
! TAGAACAGAAGGCACGGAAA+TGG - chr5_4:606847-606866 None:intergenic 45.0%
TCTTGCTAGCATATGCCCAT+AGG + chr5_4:607000-607019 Msa0828250:intron 45.0%
CTTGCTAGCATATGCCCATA+GGG + chr5_4:607001-607020 Msa0828250:intron 45.0%
ATGGGACCCACATAATTTGG+TGG + chr5_4:607505-607524 Msa0828250:intron 45.0%
TGGGACCCACATAATTTGGT+GGG + chr5_4:607506-607525 Msa0828250:intron 45.0%
TGGGTCCCACCAAATTATGT+GGG - chr5_4:607514-607533 None:intergenic 45.0%
ATGGGTCCCACCAAATTATG+TGG - chr5_4:607515-607534 None:intergenic 45.0%
AAGGTTTCTGCTTCACCTTC+TGG + chr5_4:607755-607774 Msa0828250:intron 45.0%
CTTCACCTTCTGGATATGAC+AGG + chr5_4:607765-607784 Msa0828250:CDS 45.0%
TCATCCCTGTCATATCCAGA+AGG - chr5_4:607773-607792 None:intergenic 45.0%
ATGATCATAGGAGTGAGAGG+AGG + chr5_4:607789-607808 Msa0828250:CDS 45.0%
! GGCATTCTAGGGATGATTCA+AGG + chr5_4:607810-607829 Msa0828250:CDS 45.0%
ATGATTCAAGGAGTGACAGC+CGG + chr5_4:607822-607841 Msa0828250:CDS 45.0%
TAGGGAGTCTTACTCAGGAA+GGG + chr5_4:607874-607893 Msa0828250:CDS 45.0%
GAGTATCTTCCCATTCCCAT+CGG - chr5_4:608092-608111 None:intergenic 45.0%
AATGGGAAGATACTCCACGA+AGG + chr5_4:608097-608116 Msa0828250:CDS 45.0%
ATGGGAAGATACTCCACGAA+GGG + chr5_4:608098-608117 Msa0828250:CDS 45.0%
ACAAACATTGGGGATGGTGA+AGG - chr5_4:608153-608172 None:intergenic 45.0%
TCACCATCCCCAATGTTTGT+TGG + chr5_4:608153-608172 Msa0828250:CDS 45.0%
AACTAATCGTGCATCAGGTG+AGG - chr5_4:608181-608200 None:intergenic 45.0%
GGAGAAACTAATCGTGCATC+AGG - chr5_4:608186-608205 None:intergenic 45.0%
!! ATGCACGATTAGTTTCTCCG+TGG + chr5_4:608187-608206 Msa0828250:CDS 45.0%
! GATGAATGAGGAGTATGCCA+CGG - chr5_4:608207-608226 None:intergenic 45.0%
! TGAAAGCATGCGTCAAGAGA+TGG + chr5_4:608654-608673 Msa0828250:CDS 45.0%
AATATGATGCAGACCGAGCA+TGG + chr5_4:608677-608696 Msa0828250:CDS 45.0%
TCAGAAAAAAGAGGCCGAGT+TGG + chr5_4:608880-608899 Msa0828250:CDS 45.0%
! TACCAGTCTTTTGGCCAACT+CGG - chr5_4:608897-608916 None:intergenic 45.0%
!! ATGGGTGGCTTTTGAGTGAT+TGG + chr5_4:609333-609352 Msa0828250:intron 45.0%
! ACGAGTTGAGCCATTGGAAT+TGG - chr5_4:609429-609448 None:intergenic 45.0%
! AAGAACACGAGTTGAGCCAT+TGG - chr5_4:609435-609454 None:intergenic 45.0%
! GATTTAGGGCCCACATTTGT+AGG + chr5_4:609474-609493 Msa0828250:intron 45.0%
GCATGTCTTAGAACTGGGAT+TGG - chr5_4:609512-609531 None:intergenic 45.0%
TATTCACAGGTCCGAAGAGA+TGG + chr5_4:609730-609749 Msa0828250:intron 45.0%
ATTCACAGGTCCGAAGAGAT+GGG + chr5_4:609731-609750 Msa0828250:intron 45.0%
! TGATGATGAGGATGAACGCA+AGG + chr5_4:609876-609895 Msa0828250:CDS 45.0%
ACAAAGCCTCCCTTTCTTGA+CGG + chr5_4:610015-610034 Msa0828250:CDS 45.0%
ACAACTCTGCCGTCAAGAAA+GGG - chr5_4:610027-610046 None:intergenic 45.0%
AACAACTCTGCCGTCAAGAA+AGG - chr5_4:610028-610047 None:intergenic 45.0%
! ATAAGTCTCGCCAACGCTTT+TGG + chr5_4:610163-610182 Msa0828250:CDS 45.0%
! TAAGTCTCGCCAACGCTTTT+GGG + chr5_4:610164-610183 Msa0828250:CDS 45.0%
GAACTTGCAGGCTCAAAACT+TGG + chr5_4:610186-610205 Msa0828250:CDS 45.0%
CAGCAGAACAGGTATTCTTC+TGG + chr5_4:610232-610251 Msa0828250:intron 45.0%
GCAGGTGATTCGAGAAAATC+AGG + chr5_4:610955-610974 Msa0828250:intron 45.0%
! TCAGGTTGTGGTTGTAGTTG+GGG + chr5_4:610973-610992 Msa0828250:CDS 45.0%
TAAGAAGCGGAGTGATAAGG+AGG - chr5_4:611437-611456 None:intergenic 45.0%
GAAGTGAGGGAGTTAAGAAG+CGG - chr5_4:611450-611469 None:intergenic 45.0%
AACAATGAGACATGGAGGCT+GGG - chr5_4:611747-611766 None:intergenic 45.0%
! TGATGGATGAAGCCCATGAA+AGG + chr5_4:611829-611848 Msa0828250:CDS 45.0%
TTGACAGGAAATGTTCTCCC+AGG - chr5_4:612081-612100 None:intergenic 45.0%
! TGTTGAAGGTGCAGTAAAGC+AGG + chr5_4:612134-612153 Msa0828250:CDS 45.0%
AGATAAGGATGTCACCTGGA+GGG - chr5_4:612182-612201 None:intergenic 45.0%
AAGATAAGGATGTCACCTGG+AGG - chr5_4:612183-612202 None:intergenic 45.0%
CTTGGCCAGTCATGAAGATA+AGG - chr5_4:612197-612216 None:intergenic 45.0%
CTACTCCCTTGCTGAAAGAA+TGG + chr5_4:612236-612255 Msa0828250:CDS 45.0%
CTGCTCCATTCTTTCAGCAA+GGG - chr5_4:612244-612263 None:intergenic 45.0%
TCTGCTCCATTCTTTCAGCA+AGG - chr5_4:612245-612264 None:intergenic 45.0%
TGCTGAAAGAATGGAGCAGA+TGG + chr5_4:612245-612264 Msa0828250:CDS 45.0%
GCCGGAAGCTGAGAATATAT+GGG - chr5_4:612312-612331 None:intergenic 45.0%
AGCCGGAAGCTGAGAATATA+TGG - chr5_4:612313-612332 None:intergenic 45.0%
ATCTTTGCTTGCAAGTCAGC+CGG - chr5_4:612330-612349 None:intergenic 45.0%
TGGTGCACGCAAATGTATTG+TGG + chr5_4:612368-612387 Msa0828250:CDS 45.0%
! GAAGGTGTACAACCCTAGAA+TGG + chr5_4:612464-612483 Msa0828250:CDS 45.0%
GTACAACCCTAGAATGGGTA+TGG + chr5_4:612470-612489 Msa0828250:CDS 45.0%
!! TTGAATCTCTGGAACAGGAC+TGG - chr5_4:612622-612641 None:intergenic 45.0%
AGAATATTATCCTGCGGAGG+TGG - chr5_4:612723-612742 None:intergenic 45.0%
TATGTACCAGTTGTGGGTGT+TGG + chr5_4:612749-612768 Msa0828250:CDS 45.0%
ATGTACCAGTTGTGGGTGTT+GGG + chr5_4:612750-612769 Msa0828250:CDS 45.0%
CAATCCCCCCACATTGTTAA+GGG - chr5_4:612778-612797 None:intergenic 45.0%
TCAATCCCCCCACATTGTTA+AGG - chr5_4:612779-612798 None:intergenic 45.0%
GACTGAACTTGGCTGGAAAA+TGG + chr5_4:612797-612816 Msa0828250:CDS 45.0%
!! ATCAAAAGCATCTTGGCGAG+TGG - chr5_4:612843-612862 None:intergenic 45.0%
! ACTCGCCAAGATGCTTTTGA+TGG + chr5_4:612842-612861 Msa0828250:CDS 45.0%
! CTCGCCAAGATGCTTTTGAT+GGG + chr5_4:612843-612862 Msa0828250:CDS 45.0%
! AAAGTTAGGGTGTCTTGAGG+AGG + chr5_4:612869-612888 Msa0828250:CDS 45.0%
AGGTCTAAGAAAGGCTAGAG+AGG + chr5_4:613088-613107 Msa0828250:CDS 45.0%
! TCAGGAAAGCACGTGGTTAA+GGG - chr5_4:613155-613174 None:intergenic 45.0%
! ATCAGGAAAGCACGTGGTTA+AGG - chr5_4:613156-613175 None:intergenic 45.0%
! ATCTGTATCAGGAAAGCACG+TGG - chr5_4:613162-613181 None:intergenic 45.0%
! TCAGCAAGACTAAAGGGTGT+CGG + chr5_4:613221-613240 Msa0828250:CDS 45.0%
GAGTATGTTAACACCCGGAA+TGG + chr5_4:613245-613264 Msa0828250:CDS 45.0%
!! ATGCCATAGAGAGCACTACT+GGG - chr5_4:613290-613309 None:intergenic 45.0%
AGTAGTGCTCTCTATGGCAT+GGG + chr5_4:613290-613309 Msa0828250:CDS 45.0%
ACATTGCATGTACTCCTTGG+TGG - chr5_4:613357-613376 None:intergenic 45.0%
GGAGTCTGATACATCACTAC+TGG + chr5_4:613436-613455 Msa0828250:CDS 45.0%
ATTCTCCATTTCCTCCTCCA+TGG - chr5_4:613495-613514 None:intergenic 45.0%
TAAACTTATGGAGGAGAGGG+AGG + chr5_4:613681-613700 Msa0828250:three_prime_UTR 45.0%
GAGGAGAGGGAGGTTAAAAA+AGG + chr5_4:613691-613710 Msa0828250:three_prime_UTR 45.0%
AAATTCGTGTGAGTGACCCT+AGG - chr5_4:613804-613823 None:intergenic 45.0%
!!! GTTAATTTTTTTTTTTTTTA+AGG + chr5_4:604926-604945 Msa0828250:five_prime_UTR 5.0%
!!! ATTAATTTTGATTTTATATA+AGG - chr5_4:611504-611523 None:intergenic 5.0%
TGTTTCATTATCCACCGCGC+CGG + chr5_4:605049-605068 Msa0828250:five_prime_UTR 50.0%
GGAGGTTGCTGATAGAGATC+CGG - chr5_4:605071-605090 None:intergenic 50.0%
GCAACCTCCCTTCTATCTCT+AGG + chr5_4:605082-605101 Msa0828250:five_prime_UTR 50.0%
GAACCCTAGAGATAGAAGGG+AGG - chr5_4:605089-605108 None:intergenic 50.0%
TTTCAGTTGCATCACCGCCA+TGG + chr5_4:605256-605275 Msa0828250:exon 50.0%
GTGATGACTAACCTCCATGG+CGG - chr5_4:605273-605292 None:intergenic 50.0%
GAACCAGAAAAGTCTACCGG+TGG + chr5_4:605427-605446 Msa0828250:CDS 50.0%
AGGAACATAGAGTCCACCAC+CGG - chr5_4:605446-605465 None:intergenic 50.0%
!! GTGGTGGACTCTATGTTCCT+GGG + chr5_4:605446-605465 Msa0828250:CDS 50.0%
TGGACTCTATGTTCCTGGGA+AGG + chr5_4:605450-605469 Msa0828250:CDS 50.0%
TAAACCACTCGATCCTTCCC+AGG - chr5_4:605466-605485 None:intergenic 50.0%
GAAGGATCGAGTGGTTTACG+TGG + chr5_4:605468-605487 Msa0828250:CDS 50.0%
ACCCTTGCCATTGCAAAACG+GGG + chr5_4:606137-606156 Msa0828250:CDS 50.0%
! TCCCCGTTTTGCAATGGCAA+GGG - chr5_4:606141-606160 None:intergenic 50.0%
! AGACTCTCCCCGTTTTGCAA+TGG - chr5_4:606147-606166 None:intergenic 50.0%
GGGGAGAGTCTCAAAGTGAT+GGG + chr5_4:606156-606175 Msa0828250:CDS 50.0%
GGGAGAGTCTCAAAGTGATG+GGG + chr5_4:606157-606176 Msa0828250:CDS 50.0%
TGTTGTTGAGGAAAGTGGGC+AGG + chr5_4:606256-606275 Msa0828250:CDS 50.0%
ACCAGTGAAACATCACGTGC+AGG + chr5_4:606320-606339 Msa0828250:CDS 50.0%
ACCTGCACGTGATGTTTCAC+TGG - chr5_4:606324-606343 None:intergenic 50.0%
GGTTCCCGTATGTATCAGCA+TGG - chr5_4:606761-606780 None:intergenic 50.0%
AGACATGTTGGGAGAGTGGT+GGG - chr5_4:607159-607178 None:intergenic 50.0%
GGGATGATCATAGGAGTGAG+AGG + chr5_4:607786-607805 Msa0828250:CDS 50.0%
!! GAGTGAGAGGAGGCATTCTA+GGG + chr5_4:607799-607818 Msa0828250:CDS 50.0%
TGATTCAAGGAGTGACAGCC+GGG + chr5_4:607823-607842 Msa0828250:CDS 50.0%
! TGTTTCTATGTCGGACCTCC+CGG - chr5_4:607844-607863 None:intergenic 50.0%
GACAGTAGGGAGTCTTACTC+AGG + chr5_4:607869-607888 Msa0828250:CDS 50.0%
GTAGGGAGTCTTACTCAGGA+AGG + chr5_4:607873-607892 Msa0828250:CDS 50.0%
CAGGAAGGGATTCACGTAGT+AGG + chr5_4:607888-607907 Msa0828250:CDS 50.0%
TATCTGCAGGCAGATCTGAC+TGG + chr5_4:608058-608077 Msa0828250:intron 50.0%
ATCTGCAGGCAGATCTGACT+GGG + chr5_4:608059-608078 Msa0828250:intron 50.0%
GAAGATACTCCACGAAGGGA+CGG + chr5_4:608102-608121 Msa0828250:CDS 50.0%
! TGAGGCGCCAACAAACATTG+GGG - chr5_4:608163-608182 None:intergenic 50.0%
! GTGAGGCGCCAACAAACATT+GGG - chr5_4:608164-608183 None:intergenic 50.0%
GAAACATGGTCCCAAGGAGA+AGG - chr5_4:608372-608391 None:intergenic 50.0%
GAACAGGAGACGGAGAAACA+TGG - chr5_4:608386-608405 None:intergenic 50.0%
GCACGTATTGGAACAGGAGA+CGG - chr5_4:608396-608415 None:intergenic 50.0%
! CCAGAAGCACGTATTGGAAC+AGG - chr5_4:608402-608421 None:intergenic 50.0%
CCTGTTCCAATACGTGCTTC+TGG + chr5_4:608399-608418 Msa0828250:CDS 50.0%
! GAAGAGCCAGAAGCACGTAT+TGG - chr5_4:608408-608427 None:intergenic 50.0%
TGTGCTTGATTGTCCGCGTT+TGG + chr5_4:608967-608986 Msa0828250:intron 50.0%
!! TCATTGGCCTTAAGGAGAGC+TGG + chr5_4:609068-609087 Msa0828250:intron 50.0%
ATGTAGCCTACCAACATGGG+TGG + chr5_4:609318-609337 Msa0828250:intron 50.0%
CAAAAGCCACCCATGTTGGT+AGG - chr5_4:609327-609346 None:intergenic 50.0%
CACTCAAAAGCCACCCATGT+TGG - chr5_4:609331-609350 None:intergenic 50.0%
!! CTGAGATCAGGTGCTGTTAG+AGG + chr5_4:609832-609851 Msa0828250:CDS 50.0%
!! AGGTGCTGTTAGAGGTACAG+AGG + chr5_4:609840-609859 Msa0828250:CDS 50.0%
CATAATAGGCTCTGCCTGCT+TGG - chr5_4:610055-610074 None:intergenic 50.0%
TTCTCGCAAAGGATCTGCTC+TGG + chr5_4:610110-610129 Msa0828250:CDS 50.0%
! CTGCAAGTTCCCAAAAGCGT+TGG - chr5_4:610176-610195 None:intergenic 50.0%
!! CAACGCTTTTGGGAACTTGC+AGG + chr5_4:610174-610193 Msa0828250:CDS 50.0%
CAGCAGTGTCTGCATCAATC+TGG - chr5_4:610334-610353 None:intergenic 50.0%
TGATGCAGACACTGCTGTTG+TGG + chr5_4:610337-610356 Msa0828250:CDS 50.0%
GATGCAGACACTGCTGTTGT+GGG + chr5_4:610338-610357 Msa0828250:CDS 50.0%
ACTGCTGTTGTGGGTGAAGA+TGG + chr5_4:610347-610366 Msa0828250:CDS 50.0%
GTGGTTGTAGTTGGGGAAAC+TGG + chr5_4:610980-610999 Msa0828250:CDS 50.0%
! GTAGTTGGGGAAACTGGTTC+AGG + chr5_4:610986-611005 Msa0828250:CDS 50.0%
TAGTAGGTTGCACCCAACCA+AGG + chr5_4:611211-611230 Msa0828250:CDS 50.0%
TGTTGCCAAGAGAGTTAGCG+AGG + chr5_4:611251-611270 Msa0828250:CDS 50.0%
CATCTCCTCGCTAACTCTCT+TGG - chr5_4:611259-611278 None:intergenic 50.0%
CAAGAGAGTTAGCGAGGAGA+TGG + chr5_4:611257-611276 Msa0828250:CDS 50.0%
GAGGAGATGGACACAGAGTT+GGG + chr5_4:611270-611289 Msa0828250:CDS 50.0%
CGGAGTGATAAGGAGGTTGA+AGG - chr5_4:611430-611449 None:intergenic 50.0%
TGAGGAGGTGGTTGAAGTGA+GGG - chr5_4:611463-611482 None:intergenic 50.0%
!! TTGGTTTGGTGGTCTGAGTG+AGG - chr5_4:611481-611500 None:intergenic 50.0%
CAACAATGAGACATGGAGGC+TGG - chr5_4:611748-611767 None:intergenic 50.0%
CAGCTTGAAATCACGGCGTT+GGG - chr5_4:611901-611920 None:intergenic 50.0%
TCAGCTTGAAATCACGGCGT+TGG - chr5_4:611902-611921 None:intergenic 50.0%
ATTCACGTAACAAGCCCTCC+AGG + chr5_4:612165-612184 Msa0828250:CDS 50.0%
AAGCTGCCTCAATCTCGTCT+TGG - chr5_4:612215-612234 None:intergenic 50.0%
GAGCGTCCATACCCATTCTA+GGG - chr5_4:612479-612498 None:intergenic 50.0%
! AGAGCGTCCATACCCATTCT+AGG - chr5_4:612480-612499 None:intergenic 50.0%
GCAACAAGACCACATTGCCA+AGG - chr5_4:612653-612672 None:intergenic 50.0%
TTGGGCGCCCTTAACAATGT+GGG + chr5_4:612768-612787 Msa0828250:CDS 50.0%
!! AAAAGCATCTTGGCGAGTGG+AGG - chr5_4:612840-612859 None:intergenic 50.0%
!! CAGCAAGACTAAAGGGTGTC+GGG + chr5_4:613222-613241 Msa0828250:CDS 50.0%
!! AGCAAGACTAAAGGGTGTCG+GGG + chr5_4:613223-613242 Msa0828250:CDS 50.0%
! TCGGGGAGTATGTTAACACC+CGG + chr5_4:613240-613259 Msa0828250:CDS 50.0%
ATGACATGGCATCCCATTCC+GGG - chr5_4:613261-613280 None:intergenic 50.0%
GATGACATGGCATCCCATTC+CGG - chr5_4:613262-613281 None:intergenic 50.0%
CTACTGGGGTGAAGATGACA+TGG - chr5_4:613275-613294 None:intergenic 50.0%
!! TGCCATAGAGAGCACTACTG+GGG - chr5_4:613289-613308 None:intergenic 50.0%
!! CATGCCATAGAGAGCACTAC+TGG - chr5_4:613291-613310 None:intergenic 50.0%
CAGTAGTGCTCTCTATGGCA+TGG + chr5_4:613289-613308 Msa0828250:CDS 50.0%
GGGTTGCACTCCTGATTATG+TGG + chr5_4:613310-613329 Msa0828250:CDS 50.0%
GGCACATTGCATGTACTCCT+TGG - chr5_4:613360-613379 None:intergenic 50.0%
GTACATGCAATGTGCCACAG+CGG + chr5_4:613364-613383 Msa0828250:CDS 50.0%
GAAACGAGAGAAAACGGCCA+TGG + chr5_4:613475-613494 Msa0828250:CDS 50.0%
!! GGAAATCTGCTGCTGACTCT+TGG - chr5_4:613579-613598 None:intergenic 50.0%
CAGCAGCAGATTTCCATTCC+AGG + chr5_4:613584-613603 Msa0828250:CDS 50.0%
ATAGCGAGCTGCGACTGCTT+TGG - chr5_4:605023-605042 None:intergenic 55.0%
GGCGCGGTGGATAATGAAAC+AGG - chr5_4:605050-605069 None:intergenic 55.0%
TTGCTGATAGAGATCCGGCG+CGG - chr5_4:605066-605085 None:intergenic 55.0%
! CCACCACCGGTAGACTTTTC+TGG - chr5_4:605433-605452 None:intergenic 55.0%
CCAGAAAAGTCTACCGGTGG+TGG + chr5_4:605430-605449 Msa0828250:CDS 55.0%
!! GGTGGTGGACTCTATGTTCC+TGG + chr5_4:605445-605464 Msa0828250:CDS 55.0%
TGTTCCTGGGAAGGATCGAG+TGG + chr5_4:605459-605478 Msa0828250:CDS 55.0%
TCGAGTGGTTTACGTGGCAC+CGG + chr5_4:605474-605493 Msa0828250:CDS 55.0%
! CTCCCCGTTTTGCAATGGCA+AGG - chr5_4:606142-606161 None:intergenic 55.0%
CGGGGAGAGTCTCAAAGTGA+TGG + chr5_4:606155-606174 Msa0828250:CDS 55.0%
TGCAGCAGCTGCAATCGAAG+TGG - chr5_4:606207-606226 None:intergenic 55.0%
GAACCGTTCGACTGAGCGTA+GGG + chr5_4:606776-606795 Msa0828250:CDS 55.0%
AACCGTTCGACTGAGCGTAG+GGG + chr5_4:606777-606796 Msa0828250:CDS 55.0%
AACCCCTACGCTCAGTCGAA+CGG - chr5_4:606782-606801 None:intergenic 55.0%
CAGACATGTTGGGAGAGTGG+TGG - chr5_4:607160-607179 None:intergenic 55.0%
GAGCAGACATGTTGGGAGAG+TGG - chr5_4:607163-607182 None:intergenic 55.0%
!! GGAGTGAGAGGAGGCATTCT+AGG + chr5_4:607798-607817 Msa0828250:CDS 55.0%
GAAGGTTCAAGGAGAACGCC+TGG + chr5_4:607950-607969 Msa0828250:CDS 55.0%
GCGCCAACAAACATTGGGGA+TGG - chr5_4:608159-608178 None:intergenic 55.0%
! GGTGAGGCGCCAACAAACAT+TGG - chr5_4:608165-608184 None:intergenic 55.0%
GACGGAGAAACATGGTCCCA+AGG - chr5_4:608378-608397 None:intergenic 55.0%
!! GGAAGAGGAAGCACCAAACG+CGG - chr5_4:608983-609002 None:intergenic 55.0%
ACTCTGCCGTCAAGAAAGGG+AGG - chr5_4:610024-610043 None:intergenic 55.0%
TCTGTGGAGGAGGAATGGGT+TGG + chr5_4:610647-610666 Msa0828250:intron 55.0%
! CTGTGGAGGAGGAATGGGTT+GGG + chr5_4:610648-610667 Msa0828250:intron 55.0%
CGAGGAGATGGACACAGAGT+TGG + chr5_4:611269-611288 Msa0828250:CDS 55.0%
GTGAGGAGGTGGTTGAAGTG+AGG - chr5_4:611464-611483 None:intergenic 55.0%
! GTTTGGTGGTCTGAGTGAGG+AGG - chr5_4:611478-611497 None:intergenic 55.0%
! GACATGGAGGCTGGGAGTTT+TGG - chr5_4:611739-611758 None:intergenic 55.0%
! GACTGGCCAAGACGAGATTG+AGG + chr5_4:612206-612225 Msa0828250:CDS 55.0%
TGCTGAGACATCACTGACCG+TGG + chr5_4:612401-612420 Msa0828250:CDS 55.0%
GAGACATCACTGACCGTGGA+TGG + chr5_4:612405-612424 Msa0828250:CDS 55.0%
TTTCATGGATCCACCTCCGC+AGG + chr5_4:612710-612729 Msa0828250:CDS 55.0%
GTTGGGCGCCCTTAACAATG+TGG + chr5_4:612767-612786 Msa0828250:CDS 55.0%
TGGGCGCCCTTAACAATGTG+GGG + chr5_4:612769-612788 Msa0828250:CDS 55.0%
GTGGGGGGATTGACTGAACT+TGG + chr5_4:612786-612805 Msa0828250:CDS 55.0%
GGGGATTGACTGAACTTGGC+TGG + chr5_4:612790-612809 Msa0828250:CDS 55.0%
CAGCATCACTCTCCTCTGCT+CGG - chr5_4:612950-612969 None:intergenic 55.0%
CACCCCAGTAGTGCTCTCTA+TGG + chr5_4:613284-613303 Msa0828250:CDS 55.0%
TCCAAGCTCAGCCATCCACT+GGG - chr5_4:613396-613415 None:intergenic 55.0%
ACGAGAGAAAACGGCCATGG+AGG + chr5_4:613478-613497 Msa0828250:CDS 55.0%
AGAGAAAACGGCCATGGAGG+AGG + chr5_4:613481-613500 Msa0828250:CDS 55.0%
AACGGCCATGGAGGAGGAAA+TGG + chr5_4:613487-613506 Msa0828250:CDS 55.0%
CAGTTGCATCACCGCCATGG+AGG + chr5_4:605259-605278 Msa0828250:exon 60.0%
GTTGAGGAAAGTGGGCAGGC+AGG + chr5_4:606260-606279 Msa0828250:CDS 60.0%
GGAACCGTTCGACTGAGCGT+AGG + chr5_4:606775-606794 Msa0828250:CDS 60.0%
TTCAAGGAGTGACAGCCGGG+AGG + chr5_4:607826-607845 Msa0828250:CDS 60.0%
GGCAGATCTGACTGGGACCA+TGG + chr5_4:608066-608085 Msa0828250:intron 60.0%
TGACTGGGACCATGGCCGAT+GGG + chr5_4:608074-608093 Msa0828250:CDS 60.0%
GGACCATGGCCGATGGGAAT+GGG + chr5_4:608080-608099 Msa0828250:CDS 60.0%
CTTCCCATTCCCATCGGCCA+TGG - chr5_4:608086-608105 None:intergenic 60.0%
CTAGAGACACCGTCCCTTCG+TGG - chr5_4:608114-608133 None:intergenic 60.0%
! GGCCGAGTTGGCCAAAAGAC+TGG + chr5_4:608892-608911 Msa0828250:CDS 60.0%
GATCGGCAGCTGCTGAGATC+AGG + chr5_4:609820-609839 Msa0828250:CDS 60.0%
AGCTGCGACACGCCTTGGTT+GGG - chr5_4:611226-611245 None:intergenic 60.0%
TAGCTGCGACACGCCTTGGT+TGG - chr5_4:611227-611246 None:intergenic 60.0%
CTCATAGCTGCGACACGCCT+TGG - chr5_4:611231-611250 None:intergenic 60.0%
TGGTGGTCTGAGTGAGGAGG+TGG - chr5_4:611475-611494 None:intergenic 60.0%
CAGCAGCAGCGCGACTAACA+GGG - chr5_4:612512-612531 None:intergenic 60.0%
TCAGCAGCAGCGCGACTAAC+AGG - chr5_4:612513-612532 None:intergenic 60.0%
GGGCGCCCTTAACAATGTGG+GGG + chr5_4:612770-612789 Msa0828250:CDS 60.0%
GGCGCCCTTAACAATGTGGG+GGG + chr5_4:612771-612790 Msa0828250:CDS 60.0%
TTGGCGAGTGGAGGATCCAG+TGG - chr5_4:612831-612850 None:intergenic 60.0%
TAGGCCAAAGGACCGAGCAG+AGG + chr5_4:612935-612954 Msa0828250:CDS 60.0%
CTCTCCTCTGCTCGGTCCTT+TGG - chr5_4:612942-612961 None:intergenic 60.0%
CCAAGCTCAGCCATCCACTG+GGG - chr5_4:613395-613414 None:intergenic 60.0%
GTCCAAGCTCAGCCATCCAC+TGG - chr5_4:613397-613416 None:intergenic 60.0%
TCCGGCTACTTCCTGCTCCT+AGG + chr5_4:613784-613803 Msa0828250:three_prime_UTR 60.0%
CCCTAGGAGCAGGAAGTAGC+CGG - chr5_4:613788-613807 None:intergenic 60.0%
CCGGCTACTTCCTGCTCCTA+GGG + chr5_4:613785-613804 Msa0828250:three_prime_UTR 60.0%
GTGTGAGTGACCCTAGGAGC+AGG - chr5_4:613798-613817 None:intergenic 60.0%
CTGATAGAGATCCGGCGCGG+TGG - chr5_4:605063-605082 None:intergenic 65.0%
CTGACTGGGACCATGGCCGA+TGG + chr5_4:608073-608092 Msa0828250:CDS 65.0%
GGGACCATGGCCGATGGGAA+TGG + chr5_4:608079-608098 Msa0828250:CDS 65.0%
GCTGGTCGAGCTGGTCGAAC+TGG + chr5_4:612540-612559 Msa0828250:CDS 65.0%
AGCGGTAGAGCCCCAGTGGA+TGG + chr5_4:613382-613401 Msa0828250:CDS 65.0%
CCCCAGTGGATGGCTGAGCT+TGG + chr5_4:613392-613411 Msa0828250:CDS 65.0%
GCTGCTGCTGACCAGCGTGC+TGG + chr5_4:612522-612541 Msa0828250:CDS 70.0%
! GACCAGCGTGCTGGTCGAGC+TGG + chr5_4:612531-612550 Msa0828250:CDS 70.0%
GACCAGCTCGACCAGCACGC+TGG - chr5_4:612536-612555 None:intergenic 70.0%
CGAGCTGGTCGAACTGGCCC+TGG + chr5_4:612546-612565 Msa0828250:CDS 70.0%
GGGCGCCCAACACCCACAAC+TGG - chr5_4:612758-612777 None:intergenic 70.0%
CCACTGGGGCTCTACCGCTG+TGG - chr5_4:613381-613400 None:intergenic 70.0%
CCACAGCGGTAGAGCCCCAG+TGG + chr5_4:613378-613397 Msa0828250:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 604910 614032 604910 ID=Msa0828250;Name=Msa0828250
chr5_4 mRNA 604910 614032 604910 ID=Msa0828250-mRNA-1;Parent=Msa0828250;Name=Msa0828250-mRNA-1;_AED=0.05;_eAED=0.05;_QI=255|1|1|1|0.94|0.88|18|374|1269
chr5_4 exon 604910 605130 604910 ID=Msa0828250-mRNA-1:exon:88;Parent=Msa0828250-mRNA-1
chr5_4 exon 605241 605280 605241 ID=Msa0828250-mRNA-1:exon:89;Parent=Msa0828250-mRNA-1
chr5_4 exon 605373 605514 605373 ID=Msa0828250-mRNA-1:exon:90;Parent=Msa0828250-mRNA-1
chr5_4 exon 606129 606341 606129 ID=Msa0828250-mRNA-1:exon:91;Parent=Msa0828250-mRNA-1
chr5_4 exon 606736 606806 606736 ID=Msa0828250-mRNA-1:exon:92;Parent=Msa0828250-mRNA-1
chr5_4 exon 607758 607971 607758 ID=Msa0828250-mRNA-1:exon:93;Parent=Msa0828250-mRNA-1
chr5_4 exon 608067 608228 608067 ID=Msa0828250-mRNA-1:exon:94;Parent=Msa0828250-mRNA-1
chr5_4 exon 608361 608506 608361 ID=Msa0828250-mRNA-1:exon:95;Parent=Msa0828250-mRNA-1
chr5_4 exon 608601 608698 608601 ID=Msa0828250-mRNA-1:exon:96;Parent=Msa0828250-mRNA-1
chr5_4 exon 608805 608913 608805 ID=Msa0828250-mRNA-1:exon:97;Parent=Msa0828250-mRNA-1
chr5_4 exon 609739 609916 609739 ID=Msa0828250-mRNA-1:exon:98;Parent=Msa0828250-mRNA-1
chr5_4 exon 610013 610242 610013 ID=Msa0828250-mRNA-1:exon:99;Parent=Msa0828250-mRNA-1
chr5_4 exon 610335 610511 610335 ID=Msa0828250-mRNA-1:exon:100;Parent=Msa0828250-mRNA-1
chr5_4 exon 610959 611030 610959 ID=Msa0828250-mRNA-1:exon:101;Parent=Msa0828250-mRNA-1
chr5_4 exon 611177 611353 611177 ID=Msa0828250-mRNA-1:exon:102;Parent=Msa0828250-mRNA-1
chr5_4 exon 611663 611724 611663 ID=Msa0828250-mRNA-1:exon:103;Parent=Msa0828250-mRNA-1
chr5_4 exon 611821 611973 611821 ID=Msa0828250-mRNA-1:exon:104;Parent=Msa0828250-mRNA-1
chr5_4 exon 612059 614032 612059 ID=Msa0828250-mRNA-1:exon:105;Parent=Msa0828250-mRNA-1
chr5_4 five_prime_UTR 604910 605130 604910 ID=Msa0828250-mRNA-1:five_prime_utr;Parent=Msa0828250-mRNA-1
chr5_4 five_prime_UTR 605241 605274 605241 ID=Msa0828250-mRNA-1:five_prime_utr;Parent=Msa0828250-mRNA-1
chr5_4 CDS 605275 605280 605275 ID=Msa0828250-mRNA-1:cds;Parent=Msa0828250-mRNA-1
chr5_4 CDS 605373 605514 605373 ID=Msa0828250-mRNA-1:cds;Parent=Msa0828250-mRNA-1
chr5_4 CDS 606129 606341 606129 ID=Msa0828250-mRNA-1:cds;Parent=Msa0828250-mRNA-1
chr5_4 CDS 606736 606806 606736 ID=Msa0828250-mRNA-1:cds;Parent=Msa0828250-mRNA-1
chr5_4 CDS 607758 607971 607758 ID=Msa0828250-mRNA-1:cds;Parent=Msa0828250-mRNA-1
chr5_4 CDS 608067 608228 608067 ID=Msa0828250-mRNA-1:cds;Parent=Msa0828250-mRNA-1
chr5_4 CDS 608361 608506 608361 ID=Msa0828250-mRNA-1:cds;Parent=Msa0828250-mRNA-1
chr5_4 CDS 608601 608698 608601 ID=Msa0828250-mRNA-1:cds;Parent=Msa0828250-mRNA-1
chr5_4 CDS 608805 608913 608805 ID=Msa0828250-mRNA-1:cds;Parent=Msa0828250-mRNA-1
chr5_4 CDS 609739 609916 609739 ID=Msa0828250-mRNA-1:cds;Parent=Msa0828250-mRNA-1
chr5_4 CDS 610013 610242 610013 ID=Msa0828250-mRNA-1:cds;Parent=Msa0828250-mRNA-1
chr5_4 CDS 610335 610511 610335 ID=Msa0828250-mRNA-1:cds;Parent=Msa0828250-mRNA-1
chr5_4 CDS 610959 611030 610959 ID=Msa0828250-mRNA-1:cds;Parent=Msa0828250-mRNA-1
chr5_4 CDS 611177 611353 611177 ID=Msa0828250-mRNA-1:cds;Parent=Msa0828250-mRNA-1
chr5_4 CDS 611663 611724 611663 ID=Msa0828250-mRNA-1:cds;Parent=Msa0828250-mRNA-1
chr5_4 CDS 611821 611973 611821 ID=Msa0828250-mRNA-1:cds;Parent=Msa0828250-mRNA-1
chr5_4 CDS 612059 613658 612059 ID=Msa0828250-mRNA-1:cds;Parent=Msa0828250-mRNA-1
chr5_4 three_prime_UTR 613659 614032 613659 ID=Msa0828250-mRNA-1:three_prime_utr;Parent=Msa0828250-mRNA-1
Gene Sequence

>Msa0828250

ATGGAGAAAAATGGTGCTAATGCTGAAATTGTTGACATAAACAAGACTACAATGACGTTGGAACCAGAAAAGTCTACCGGTGGTGGACTCTATGTTCCTGGGAAGGATCGAGTGGTTTACGTGGCACCGGAGAGAAAATCTCGTTTGGGACTTGATACCCTTGCCATTGCAAAACGGGGAGAGTCTCAAAGTGATGGGGCATTCAAGGTGCCAAAAGAGATAACCACTTCGATTGCAGCTGCTGCAGAAGATGAAGATAAGTCTGAGTCCTCTGATGTTGTTGAGGAAAGTGGGCAGGCAGGTACACGCAGACATGCTCATAGAAGATATCGTGAGACAACCAGTGAAACATCACGTGCAGAAAGTTCTCTGACCGAAGATCACCATGCTGATACATACGGGAACCGTTCGACTGAGCGTAGGGGTTCAGATGTTTCTGCTTCACCTTCTGGATATGACAGGGATGATCATAGGAGTGAGAGGAGGCATTCTAGGGATGATTCAAGGAGTGACAGCCGGGAGGTCCGACATAGAAACAATTATGACAGTAGGGAGTCTTACTCAGGAAGGGATTCACGTAGTAGGTATTATGATCATGAATATGATAGAAAGCGAAACAGATATGAAGGTTCAAGGAGAACGCCTGGCAGATCTGACTGGGACCATGGCCGATGGGAATGGGAAGATACTCCACGAAGGGACGGTGTCTCTAGTTCTAGACGTCATCAACCTTCACCATCCCCAATGTTTGTTGGCGCCTCACCTGATGCACGATTAGTTTCTCCGTGGCATACTCCTCATTCATCCTATAATTCACCTTCTCCTTGGGACCATGTTTCTCCGTCTCCTGTTCCAATACGTGCTTCTGGCTCTTCAGTCAAATCTTCTGTTTCTGGATATAATCGAAGGTCGCATAAACTCGCCTTTTCTTCAGAAAACTCAGATACATATGAGGAGGAAATAGCAGATAAATCTGACTTGGGTGAAGAACACAAGTATGAGATTACTGAAAGCATGCGTCAAGAGATGGAATATGATGCAGACCGAGCATGGTATGATAGAGAGGAAGGCAGCGCATTGTTTGATTCTGATAGCTCTTCACTTTTTCTTGGAGATGAGGCTTCATTTCAGAAAAAAGAGGCCGAGTTGGCCAAAAGACTGGTCCGAAGAGATGGGACTAAGATGTCCCTTTCTCAAAGCAAGAAATTGTCTCAGCTTACAGCTGATAATGCTCAATGGGAAGATCGGCAGCTGCTGAGATCAGGTGCTGTTAGAGGTACAGAGGTTCAGACTGAATTTGATGATGAGGATGAACGCAAGGTCATTCTTCTTGTGCACGATACAAAGCCTCCCTTTCTTGACGGCAGAGTTGTTTATACCAAGCAGGCAGAGCCTATTATGCCAATAAAAGATCCAACATCTGACATGGCTTTAATTTCTCGCAAAGGATCTGCTCTGGTAAGAGAAATCCATGAGAAGCAGAGTTCGAATAAGTCTCGCCAACGCTTTTGGGAACTTGCAGGCTCAAAACTTGGCGATATCTTAGGCGTTGAAAAAACAGCAGAACAGATTGATGCAGACACTGCTGTTGTGGGTGAAGATGGTGAAATTGATTTTAAGGAGGAAGCTAAGTTTTCAAATCACATGAAGAAGGGAGAAGCTGTAAGTGACTTCGCTATGTCAAAAACTCTTGCTGAGCAAAGGCAATATCTGCCTATTTTTTCAGTGCGAGAAGAGTTATTACAGGTGATTCGAGAAAATCAGGTTGTGGTTGTAGTTGGGGAAACTGGTTCAGGAAAAACAACCCAATTGACACAGTATCTATATGAAGATGGCTATACTATTGGCGGTATAGTAGGTTGCACCCAACCAAGGCGTGTCGCAGCTATGAGTGTTGCCAAGAGAGTTAGCGAGGAGATGGACACAGAGTTGGGAGATAAAGTTGGCTATGCTATACGTTTTGAGGATGTGACTGGACCAAATACCGTAATAAAGTACATGACTGATGGGGTACTTCTACGTGAAACACTTAAAGACTCCGATTTAGACAAATATAGGGTTATTGTGATGGATGAAGCCCATGAAAGGTCATTAAGCACAGATGTCCTTTTTGGAATATTGAAGAAAGTTGTAGCCCAACGCCGTGATTTCAAGCTGATTGTCACATCAGCAACTCTGAATGCACAGAAATTTTCACATTTCTTTGGAAGTGTTCCAATTTTTCATATTCCTGGGAGAACATTTCCTGTCAATATATTATGGAGTAAAACTCCAGTTGAAGATTATGTTGAAGGTGCAGTAAAGCAGGCTATGACTATTCACGTAACAAGCCCTCCAGGTGACATCCTTATCTTCATGACTGGCCAAGACGAGATTGAGGCAGCTTGCTACTCCCTTGCTGAAAGAATGGAGCAGATGGTTTCGTCTTCAAATAAAGAAGTCCCGAAACTTTTGATTCTTCCCATATATTCTCAGCTTCCGGCTGACTTGCAAGCAAAGATATTTCAGAAAGCTGAAGATGGTGCACGCAAATGTATTGTGGCCACTAATATTGCTGAGACATCACTGACCGTGGATGGTATCTTCTTTGTCATAGACACAGGCTATGGTAAAATGAAGGTGTACAACCCTAGAATGGGTATGGACGCTCTTCAAGTCTTCCCTGTTAGTCGCGCTGCTGCTGACCAGCGTGCTGGTCGAGCTGGTCGAACTGGCCCTGGTACATGCTATCGATTGTATACAGAGAGTGCTTACCTAAATGAAATGTTGGCCAGTCCTGTTCCAGAGATTCAAAGAACTAACCTTGGCAATGTGGTCTTGTTGCTGAAATCTCTTAAAGTTGAAAATTTACTCGACTTTGATTTCATGGATCCACCTCCGCAGGATAATATTCTCAATTCTATGTACCAGTTGTGGGTGTTGGGCGCCCTTAACAATGTGGGGGGATTGACTGAACTTGGCTGGAAAATGGTTGAGTTTCCACTGGATCCTCCACTCGCCAAGATGCTTTTGATGGGTGAAAAGTTAGGGTGTCTTGAGGAGGTTCTGACAATAGTTTCCATGCTTTCAGTACCATCTGTTTTCTTTAGGCCAAAGGACCGAGCAGAGGAGAGTGATGCTGCACGTGAAAGATTTTTTGTGCCAGAATCCGATCATTTAACTCTATACAATGTCTATCAGCAATGGAAACAACACGATTACAGAGGTGATTGGTGCAATGACCATTTTTTGCATGTTAAAGGTCTAAGAAAGGCTAGAGAGGTTAGATCCCAGCTGCTTGATATTCTCAAGACACTAAAAATTCCCTTAACCACGTGCTTTCCTGATACAGATGTAGTTAGAAAAGCAATCTGTTCTGCGTACTTCCACAATTCAGCAAGACTAAAGGGTGTCGGGGAGTATGTTAACACCCGGAATGGGATGCCATGTCATCTTCACCCCAGTAGTGCTCTCTATGGCATGGGTTGCACTCCTGATTATGTGGTTTATCACGAGTTAATTCTAACCACCAAGGAGTACATGCAATGTGCCACAGCGGTAGAGCCCCAGTGGATGGCTGAGCTTGGACCCATGTTTTTCTCTGTGAAGGAGTCTGATACATCACTACTGGAGCATAAAAAGAAACAGAAACGAGAGAAAACGGCCATGGAGGAGGAAATGGAGAATTTAAAGAAGGAGCAAGCAGAGTTAGAGAGAGAAAATAAACGGAAGGAGAAGGAAAAAAGGGCCAAGAGTCAGCAGCAGATTTCCATTCCAGGTTTAAAAAAGGGTTCTTCCACATTCTTGAGACCAAAAAAGTTTGGTTTGTAA
Protein sequence

>Msa0828250

MEKNGANAEIVDINKTTMTLEPEKSTGGGLYVPGKDRVVYVAPERKSRLGLDTLAIAKRGESQSDGAFKVPKEITTSIAAAAEDEDKSESSDVVEESGQAGTRRHAHRRYRETTSETSRAESSLTEDHHADTYGNRSTERRGSDVSASPSGYDRDDHRSERRHSRDDSRSDSREVRHRNNYDSRESYSGRDSRSRYYDHEYDRKRNRYEGSRRTPGRSDWDHGRWEWEDTPRRDGVSSSRRHQPSPSPMFVGASPDARLVSPWHTPHSSYNSPSPWDHVSPSPVPIRASGSSVKSSVSGYNRRSHKLAFSSENSDTYEEEIADKSDLGEEHKYEITESMRQEMEYDADRAWYDREEGSALFDSDSSSLFLGDEASFQKKEAELAKRLVRRDGTKMSLSQSKKLSQLTADNAQWEDRQLLRSGAVRGTEVQTEFDDEDERKVILLVHDTKPPFLDGRVVYTKQAEPIMPIKDPTSDMALISRKGSALVREIHEKQSSNKSRQRFWELAGSKLGDILGVEKTAEQIDADTAVVGEDGEIDFKEEAKFSNHMKKGEAVSDFAMSKTLAEQRQYLPIFSVREELLQVIRENQVVVVVGETGSGKTTQLTQYLYEDGYTIGGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVAQRRDFKLIVTSATLNAQKFSHFFGSVPIFHIPGRTFPVNILWSKTPVEDYVEGAVKQAMTIHVTSPPGDILIFMTGQDEIEAACYSLAERMEQMVSSSNKEVPKLLILPIYSQLPADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIFFVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLASPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPPQDNILNSMYQLWVLGALNNVGGLTELGWKMVEFPLDPPLAKMLLMGEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFFVPESDHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPLTTCFPDTDVVRKAICSAYFHNSARLKGVGEYVNTRNGMPCHLHPSSALYGMGCTPDYVVYHELILTTKEYMQCATAVEPQWMAELGPMFFSVKESDTSLLEHKKKQKREKTAMEEEMENLKKEQAELERENKRKEKEKRAKSQQQISIPGLKKGSSTFLRPKKFGL*