AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1344310


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1344310 MtrunA17_Chr1g0207291 97.816 641 5 1 1 641 1 632 0.0 1293
Msa1344310 MtrunA17_Chr5g0393731 84.399 641 85 4 1 641 1 626 0.0 1131
Msa1344310 MtrunA17_Chr8g0334591 64.274 627 210 3 12 636 7 621 0.0 871
Msa1344310 MtrunA17_Chr7g0244951 64.984 614 199 3 25 637 21 619 0.0 869
Msa1344310 MtrunA17_Chr2g0296671 61.600 625 222 5 11 634 6 613 0.0 796
Msa1344310 MtrunA17_Chr3g0133721 88.060 67 8 0 1 67 1 67 1.03e-25 101
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1344310 AT2G14740.2 82.792 616 95 2 26 641 24 628 0.0 1083
Msa1344310 AT2G14740.1 82.792 616 95 2 26 641 24 628 0.0 1083
Msa1344310 AT2G14720.1 82.143 616 99 2 26 641 24 628 0.0 1075
Msa1344310 AT2G14720.2 82.143 616 99 2 26 641 24 628 0.0 1075
Msa1344310 AT3G52850.1 69.614 622 176 4 9 629 3 612 0.0 920
Msa1344310 AT2G30290.2 67.492 606 185 2 23 628 20 613 0.0 902
Msa1344310 AT2G30290.1 67.492 606 185 2 23 628 20 613 0.0 900
Msa1344310 AT4G20110.1 60.806 620 222 6 13 629 10 611 0.0 810
Msa1344310 AT4G20110.2 60.645 620 226 7 13 629 10 614 0.0 805
Msa1344310 AT1G30900.1 59.236 628 236 6 3 630 4 611 0.0 800
Msa1344310 AT2G34940.1 56.190 630 252 8 5 630 2 611 0.0 743

Find 196 sgRNAs with CRISPR-Local

Find 462 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCGAAGTTCTTCTTCTA+TGG 0.133612 tig0006806:-40344 Msa1344310:CDS
TTGTCTACAAATACAGAATT+AGG 0.178416 tig0006806:-34866 Msa1344310:CDS
GGCTTAGTTCTGGCCGCTTC+AGG 0.182959 tig0006806:-34897 Msa1344310:CDS
AGTCTGCTTGGGCTGCATTT+TGG 0.190559 tig0006806:-34932 Msa1344310:CDS
CTGAAATCTTGCTCGGGATC+TGG 0.207921 tig0006806:+38789 None:intergenic
TTCTGAAACCAACCCATTTC+AGG 0.217715 tig0006806:-40407 Msa1344310:five_prime_UTR
GCTCTCATCGAAAAGAATTT+TGG 0.223991 tig0006806:-39119 Msa1344310:CDS
CAGAAGAAGCTCCAGCCTTC+TGG 0.229340 tig0006806:+39243 None:intergenic
TGTAAAGAGTTTGATGAGTC+TGG 0.245741 tig0006806:-40121 Msa1344310:CDS
AGCACCAGGCTTAGATTTAA+AGG 0.247886 tig0006806:+40093 None:intergenic
CATACATGGATTCTGAAATA+AGG 0.266551 tig0006806:-34556 Msa1344310:CDS
AACCATATCTCCACCACTTA+TGG 0.277116 tig0006806:+39079 None:intergenic
CAGAAAATGCATGTCCATTC+CGG 0.281927 tig0006806:+36748 None:intergenic
GTGGGGATCTTCTGTATATC+AGG 0.289133 tig0006806:-35086 Msa1344310:CDS
TTGTTTATCTTACACCTTCC+AGG 0.290685 tig0006806:+36792 None:intergenic
TAATATAGTGGGGTGTAAAC+TGG 0.302686 tig0006806:+38889 None:intergenic
TCCTGTACTAAAAGCAAAAT+AGG 0.304226 tig0006806:+34167 None:intergenic
GATAGATGTCATGTATTATT+CGG 0.308921 tig0006806:-34310 Msa1344310:three_prime_UTR
CATTGTAGTCGGCTTAGTTC+TGG 0.309333 tig0006806:-34907 Msa1344310:CDS
GTTATGAAAGCTATTTGTTC+TGG 0.309679 tig0006806:-38138 Msa1344310:CDS
AACAAAACAAAAGGAAATTA+TGG 0.310587 tig0006806:+40532 None:intergenic
GAGTGTCCTGCAGGGTTTAA+AGG 0.316647 tig0006806:-36576 Msa1344310:CDS
AGAATTCTGAAAAGGGAAAA+AGG 0.316929 tig0006806:+34390 None:intergenic
TACTTGAAAGGACTGAATTT+AGG 0.320321 tig0006806:-34271 Msa1344310:three_prime_UTR
GTATTCTTGCAGCTACATTC+AGG 0.330559 tig0006806:+35135 None:intergenic
TCATACTCCACACGATCATC+TGG 0.339398 tig0006806:+39020 None:intergenic
GCTTAGTTCTGGCCGCTTCA+GGG 0.346264 tig0006806:-34896 Msa1344310:CDS
TGAAATCTTGCTCGGGATCT+GGG 0.377710 tig0006806:+38790 None:intergenic
GGTTGAGTTCCTTTGTTTGT+TGG 0.384114 tig0006806:+40566 None:intergenic
ACGAATTTCGCCATTGATGA+AGG 0.392022 tig0006806:+40286 None:intergenic
CAATACGGTGGTAGCATGGC+TGG 0.398045 tig0006806:-40178 Msa1344310:CDS
AGAAAATGCATGTCCATTCC+GGG 0.415168 tig0006806:+36749 None:intergenic
ATCGTTGACGCCTTCATCAA+TGG 0.415698 tig0006806:-40296 Msa1344310:CDS
GACAACTAGAGTAGGCAATA+TGG 0.417108 tig0006806:+38282 None:intergenic
CACATCTTTCCCGTCATAAC+CGG 0.417877 tig0006806:+38764 None:intergenic
AGAAGAAGCTCCAGCCTTCT+GGG 0.420583 tig0006806:+39244 None:intergenic
TGGTTAACGTAAATCTTGAT+TGG 0.421095 tig0006806:-39061 Msa1344310:CDS
TTACACCCCACTATATTACT+TGG 0.422794 tig0006806:-38884 Msa1344310:CDS
TTCAGAAATTGATTCTGTTA+CGG 0.428967 tig0006806:+40423 None:intergenic
CATGATTTACAACTTCTGAT+TGG 0.429502 tig0006806:+34501 None:intergenic
TCAAATTAGGTGCCCAATGA+AGG 0.430681 tig0006806:-38652 Msa1344310:CDS
ATACATGGATTCTGAAATAA+GGG 0.434533 tig0006806:-34555 Msa1344310:CDS
CAATGCTCAGAATTCTGAAA+AGG 0.435386 tig0006806:+34382 None:intergenic
TGTCTACAAATACAGAATTA+GGG 0.436258 tig0006806:-34865 Msa1344310:intron
TACCCTCATGAACAGGATAA+TGG 0.437177 tig0006806:-36612 Msa1344310:intron
GACAGTACCAAGTAATATAG+TGG 0.441864 tig0006806:+38877 None:intergenic
ACGATCGAGCAAAACAATAG+TGG 0.444164 tig0006806:+40066 None:intergenic
AGCCATAAGTGGTGGAGATA+TGG 0.445018 tig0006806:-39081 Msa1344310:CDS
GATAGTGCGATTGGTAACTT+TGG 0.451575 tig0006806:-40208 Msa1344310:CDS
GTGTGGAATGCCCAGAAGGC+TGG 0.460343 tig0006806:-39254 Msa1344310:CDS
ATTCGAAGTTCTTCTTCTAT+GGG 0.467731 tig0006806:-40343 Msa1344310:CDS
TGCAGGTAAAACTGCCAGTC+GGG 0.471405 tig0006806:-34964 Msa1344310:intron
GTTAGATGCGAGTGTCCTGC+AGG 0.471841 tig0006806:-36585 Msa1344310:CDS
GGGAAGGAGGAAAGTCTGCT+TGG 0.476259 tig0006806:-34944 Msa1344310:CDS
TATGTTCCTTTGATACTATC+CGG 0.476682 tig0006806:+40232 None:intergenic
GCAGATGATCCATCCTCCTC+AGG 0.476864 tig0006806:+39173 None:intergenic
AACTTCTGATTGGCTGTCCA+AGG 0.478629 tig0006806:+34511 None:intergenic
GTATCCAAAGGATAATCAAA+AGG 0.478802 tig0006806:-40146 Msa1344310:CDS
ATAGTGCGATTGGTAACTTT+GGG 0.479211 tig0006806:-40207 Msa1344310:CDS
TCCCACACAACTCCGCCAAC+AGG 0.479567 tig0006806:+34442 None:intergenic
AATGTAGCTGCAAGAATACC+TGG 0.480193 tig0006806:-35131 Msa1344310:CDS
AGTTAAATGCGATATGTTGA+TGG 0.480940 tig0006806:-38967 Msa1344310:CDS
TGTGAATGCCCCTTGGTAGA+TGG 0.482376 tig0006806:-37782 Msa1344310:CDS
TTCGATTTCCTGAAATGGGT+TGG 0.483180 tig0006806:+40399 None:intergenic
TATTCTTGCAGCTACATTCA+GGG 0.483493 tig0006806:+35136 None:intergenic
ATGTGGTTATTGAAAATTTG+AGG 0.485254 tig0006806:-38746 Msa1344310:CDS
GTAAAGAGTTTGATGAGTCT+GGG 0.488702 tig0006806:-40120 Msa1344310:CDS
GGAAGGAGGAAAGTCTGCTT+GGG 0.490069 tig0006806:-34943 Msa1344310:CDS
ATTGATTCTGTTACGGAGAA+GGG 0.490926 tig0006806:+40430 None:intergenic
CTCTAAATCTATTGAGTCCA+CGG 0.497078 tig0006806:+40685 None:intergenic
AATTGATTCTGTTACGGAGA+AGG 0.498413 tig0006806:+40429 None:intergenic
TGAGAAAGGAACAAAACAAA+AGG 0.500339 tig0006806:+40523 None:intergenic
ACCGGTGCTGAAATCTTGCT+CGG 0.501464 tig0006806:+38782 None:intergenic
ACAATAGTGGGAAGAGCACC+AGG 0.501923 tig0006806:+40079 None:intergenic
TTCTGAAATAAGGGCCATCA+TGG 0.502019 tig0006806:-34546 Msa1344310:CDS
TTCATCAATGGCGAAATTCG+TGG 0.503001 tig0006806:-40284 Msa1344310:CDS
CAGCTTGAGGGTCACTTCAC+CGG 0.503515 tig0006806:-40251 Msa1344310:CDS
TATGATTATTCAATATCTGC+AGG 0.504784 tig0006806:-38521 Msa1344310:CDS
ATTTCCTTTAAATCTAAGCC+TGG 0.504811 tig0006806:-40097 Msa1344310:CDS
TATTACTTGGTACTGTCCTC+AGG 0.506859 tig0006806:-38871 Msa1344310:CDS
AATGCTCAGAATTCTGAAAA+GGG 0.506899 tig0006806:+34383 None:intergenic
ATCCTCCTCAGGTGTGTCCA+TGG 0.509434 tig0006806:+39184 None:intergenic
AGCTTCTTCTGTTCTTGTTG+CGG 0.510707 tig0006806:-39231 Msa1344310:CDS
CCCGAGCAAGATTTCAGCAC+CGG 0.512142 tig0006806:-38783 Msa1344310:CDS
TGGAGAACAACGGTGGTTGT+TGG 0.512435 tig0006806:-37953 Msa1344310:CDS
CTTAGTTCTGGCCGCTTCAG+GGG 0.515721 tig0006806:-34895 Msa1344310:CDS
ATTTCAGCACCGGTTATGAC+GGG 0.515820 tig0006806:-38773 Msa1344310:CDS
AGATAAACAATGGAGGTTGT+TGG 0.516909 tig0006806:-36779 Msa1344310:CDS
GGTGGAGACAAATGAATGCT+TGG 0.517791 tig0006806:-37973 Msa1344310:CDS
GGGTTTACAGCTAGTGGACC+TGG 0.520969 tig0006806:-36810 Msa1344310:intron
GCCTGTTGGCGGAGTTGTGT+GGG 0.521933 tig0006806:-34443 Msa1344310:three_prime_UTR
GAGGTTGTTGGCATGAAGCC+CGG 0.523945 tig0006806:-36767 Msa1344310:CDS
GATTTCAGCACCGGTTATGA+CGG 0.525212 tig0006806:-38774 Msa1344310:CDS
TCTGCAGGAAAATTGGAGAA+AGG 0.526045 tig0006806:-38165 Msa1344310:intron
TATCCAAAGGATAATCAAAA+GGG 0.531673 tig0006806:-40145 Msa1344310:CDS
AGCTATAACTGCAGTTGCAG+TGG 0.533286 tig0006806:-35105 Msa1344310:CDS
AATATAGTGGGGTGTAAACT+GGG 0.538132 tig0006806:+38890 None:intergenic
AGACTTTCCTCCTTCCCGAC+TGG 0.538256 tig0006806:+34950 None:intergenic
GAAAGAAGAGCAAGATGCCC+AGG 0.543075 tig0006806:-38432 Msa1344310:intron
CATGGCACAGTATATGCCCT+TGG 0.543318 tig0006806:-34528 Msa1344310:CDS
GGAACATACGATAGTGCGAT+TGG 0.544143 tig0006806:-40217 Msa1344310:CDS
CCACTGCTCAAACAAACAGC+TGG 0.546385 tig0006806:+38096 None:intergenic
ACAGTACCAAGTAATATAGT+GGG 0.548081 tig0006806:+38878 None:intergenic
GCTATAACTGCAGTTGCAGT+GGG 0.548449 tig0006806:-35104 Msa1344310:CDS
GGGCATATACTGTGCCATGA+TGG 0.550471 tig0006806:+34532 None:intergenic
ACCTCAATACGGTGGTAGCA+TGG 0.553317 tig0006806:-40182 Msa1344310:CDS
TAGCAAGTTGTATACTTGAA+AGG 0.553378 tig0006806:-34283 Msa1344310:three_prime_UTR
GGTGGAGAAGAACAGCTTGA+GGG 0.554991 tig0006806:-40263 Msa1344310:CDS
CTTTCTTTACCAACAAACAA+AGG 0.555192 tig0006806:-40575 Msa1344310:five_prime_UTR
AGCTAACATAACTGCATGCA+AGG 0.558133 tig0006806:-37919 Msa1344310:intron
GCCATGCTACCACCGTATTG+AGG 0.559538 tig0006806:+40181 None:intergenic
CGATCGAGCAAAACAATAGT+GGG 0.563565 tig0006806:+40067 None:intergenic
CCGTCACCTTTAAACCCTGC+AGG 0.563950 tig0006806:+36570 None:intergenic
GTTGGTAAAGAAAGTAACAG+AGG 0.564771 tig0006806:+40584 None:intergenic
TATGTTGATGGAATTTGTGA+AGG 0.566441 tig0006806:-38955 Msa1344310:CDS
GAAACATGTCAGCCTGTTGG+CGG 0.567833 tig0006806:-34454 Msa1344310:three_prime_UTR
GTAGATGGTGTGCAGTTCAA+AGG 0.568441 tig0006806:-37767 Msa1344310:CDS
CCGGTGCTGAAATCTTGCTC+GGG 0.568944 tig0006806:+38783 None:intergenic
AGCCTGTTGGCGGAGTTGTG+TGG 0.569403 tig0006806:-34444 Msa1344310:three_prime_UTR
CTCATGAACAGGATAATGGA+GGG 0.573028 tig0006806:-36608 Msa1344310:intron
CACAGACATTGATGAATGCA+AGG 0.576190 tig0006806:-35178 Msa1344310:intron
TCCACACGATCATCTGGGTG+AGG 0.580364 tig0006806:+39026 None:intergenic
GAAATCTTGCTCGGGATCTG+GGG 0.581809 tig0006806:+38791 None:intergenic
TCCACACTCATCATTGCTGT+TGG 0.585345 tig0006806:+38989 None:intergenic
ATGGACACACCTGAGGAGGA+TGG 0.586336 tig0006806:-39182 Msa1344310:CDS
AACTTTGGGATACCTCAATA+CGG 0.590006 tig0006806:-40193 Msa1344310:CDS
GCGGCACAAATATTAGAGAA+AGG 0.590141 tig0006806:-38921 Msa1344310:CDS
AATACGGTGGTAGCATGGCT+GGG 0.590400 tig0006806:-40177 Msa1344310:CDS
ACTTCTGATTGGCTGTCCAA+GGG 0.591399 tig0006806:+34512 None:intergenic
TGTTGGCATGAAGCCCGGAA+TGG 0.592207 tig0006806:-36762 Msa1344310:CDS
CATACTCCACACGATCATCT+GGG 0.593682 tig0006806:+39021 None:intergenic
CGTAAATCTTGATTGGAGAG+AGG 0.593987 tig0006806:-39054 Msa1344310:CDS
CTGGGGCACAGTATCTTCCA+TGG 0.594050 tig0006806:+38808 None:intergenic
GGAAGGTGTAAGATAAACAA+TGG 0.594628 tig0006806:-36789 Msa1344310:CDS
GATGGTTATACGACTTGTGA+AGG 0.594672 tig0006806:-37743 Msa1344310:intron
GGTAAAACTGCCAGTCGGGA+AGG 0.595610 tig0006806:-34960 Msa1344310:CDS
AACCATGGACACACCTGAGG+AGG 0.596696 tig0006806:-39186 Msa1344310:CDS
TGGGAAATGAGACCTGGTTG+TGG 0.599749 tig0006806:-34424 Msa1344310:three_prime_UTR
CCTGCAGGGTTTAAAGGTGA+CGG 0.600064 tig0006806:-36570 Msa1344310:CDS
CTGCAGGTAAAACTGCCAGT+CGG 0.600111 tig0006806:-34965 Msa1344310:intron
GGTGTGCAGTTCAAAGGAGA+TGG 0.604361 tig0006806:-37761 Msa1344310:CDS
ACTCACTTATGCATGCATCA+TGG 0.604511 tig0006806:+35061 None:intergenic
GAACAACGGTGGTTGTTGGA+AGG 0.605351 tig0006806:-37949 Msa1344310:CDS
AACATAGTCCCACCACACCC+AGG 0.607740 tig0006806:+38683 None:intergenic
GTAAAGAAAGTAACAGAGGA+AGG 0.609335 tig0006806:+40588 None:intergenic
ATGTAGCTGCAAGAATACCT+GGG 0.609762 tig0006806:-35130 Msa1344310:CDS
GATGCTGTCATTGAATCACT+TGG 0.610137 tig0006806:-38603 Msa1344310:CDS
AAATTAAAGAAAGCCATAAG+TGG 0.610630 tig0006806:-39092 Msa1344310:CDS
AACTGCACACCATCTACCAA+GGG 0.610753 tig0006806:+37773 None:intergenic
TTAAAGAAAGCCATAAGTGG+TGG 0.611621 tig0006806:-39089 Msa1344310:CDS
ACTGCAGTTATAGCTTCCCC+AGG 0.613660 tig0006806:+35113 None:intergenic
GCGAGTATGTGAATGCCCCT+TGG 0.614068 tig0006806:-37789 Msa1344310:CDS
TGGGGATCTTCTGTATATCA+GGG 0.614878 tig0006806:-35085 Msa1344310:CDS
CCCTCACCCAGATGATCGTG+TGG 0.615906 tig0006806:-39027 Msa1344310:CDS
CGACTGTTGACAACTAGAGT+AGG 0.615928 tig0006806:+38274 None:intergenic
GAACTGCACACCATCTACCA+AGG 0.616672 tig0006806:+37772 None:intergenic
CGGTTATGACGGGAAAGATG+TGG 0.621138 tig0006806:-38763 Msa1344310:CDS
TCTAAATCTATTGAGTCCAC+GGG 0.623500 tig0006806:+40686 None:intergenic
TGGGAACGTTGTGTATCCAA+AGG 0.624009 tig0006806:-40158 Msa1344310:CDS
TAATTCTGTATTTGTAGACA+AGG 0.626747 tig0006806:+34868 None:intergenic
TGGTGGAGAAGAACAGCTTG+AGG 0.627384 tig0006806:-40264 Msa1344310:CDS
ACTTCACCGGATAGTATCAA+AGG 0.627824 tig0006806:-40238 Msa1344310:CDS
GACAAGGTATGCCCCTGAAG+CGG 0.629612 tig0006806:+34884 None:intergenic
AAAACTGCCAGTCGGGAAGG+AGG 0.630243 tig0006806:-34957 Msa1344310:CDS
CCAGCTGTTTGTTTGAGCAG+TGG 0.630846 tig0006806:-38096 Msa1344310:intron
CCTCATGAACAGGATAATGG+AGG 0.632470 tig0006806:-36609 Msa1344310:intron
AGAGAACATAACAATACCAT+CGG 0.633990 tig0006806:-39141 Msa1344310:CDS
TTACAAATCACAATCATGAG+TGG 0.634031 tig0006806:+34190 None:intergenic
GGCATTCACATACTCGCCCA+CGG 0.638497 tig0006806:+37795 None:intergenic
GTACAAGGTATGCCACAACC+AGG 0.644728 tig0006806:+34412 None:intergenic
ACATAGTCCCACCACACCCA+GGG 0.646860 tig0006806:+38684 None:intergenic
GAAGGTGTGGAATGCCCAGA+AGG 0.648445 tig0006806:-39258 Msa1344310:CDS
TTAGATGCGAGTGTCCTGCA+GGG 0.651093 tig0006806:-36584 Msa1344310:CDS
GTCAACAGTCGACAATATCG+AGG 0.651235 tig0006806:-38262 Msa1344310:intron
CCACACGATCATCTGGGTGA+GGG 0.651924 tig0006806:+39027 None:intergenic
TTACAGCTAGTGGACCTGGA+AGG 0.655369 tig0006806:-36806 Msa1344310:intron
TTTCTCAGGATACTTTCCGT+GGG 0.661548 tig0006806:-37811 Msa1344310:intron
TCATGAACAGGATAATGGAG+GGG 0.665637 tig0006806:-36607 Msa1344310:intron
AGGTGTAAGATAAACAATGG+AGG 0.665718 tig0006806:-36786 Msa1344310:CDS
TTACTTAACGTGAATGCCTG+AGG 0.666657 tig0006806:+38855 None:intergenic
ATCGTGTGGAGTATGAGCTG+TGG 0.668780 tig0006806:-39013 Msa1344310:CDS
GCACAAATATTAGAGAAAGG+TGG 0.668896 tig0006806:-38918 Msa1344310:CDS
ATCAATGGCGAAATTCGTGG+TGG 0.674911 tig0006806:-40281 Msa1344310:CDS
AGTGAAACATGTCAGCCTGT+TGG 0.675698 tig0006806:-34457 Msa1344310:three_prime_UTR
AATAACCATGGACACACCTG+AGG 0.685427 tig0006806:-39189 Msa1344310:CDS
ACCAACAGCAATGATGAGTG+TGG 0.691750 tig0006806:-38990 Msa1344310:CDS
AATGAATGCTTGGAGAACAA+CGG 0.697524 tig0006806:-37963 Msa1344310:CDS
CAGTACCAAGTAATATAGTG+GGG 0.700032 tig0006806:+38879 None:intergenic
AAGTCTCAGTGCATTAACCA+TGG 0.700775 tig0006806:-38825 Msa1344310:CDS
GTTGTGTGGGAAATGAGACC+TGG 0.701958 tig0006806:-34430 Msa1344310:three_prime_UTR
TGTAGCTGCAAGAATACCTG+GGG 0.705484 tig0006806:-35129 Msa1344310:CDS
TAGGTTGGGAAGGGATCACG+AGG 0.715187 tig0006806:-38313 Msa1344310:CDS
CTATAACTGCAGTTGCAGTG+GGG 0.736333 tig0006806:-35103 Msa1344310:CDS
ACTGCACACCATCTACCAAG+GGG 0.748266 tig0006806:+37774 None:intergenic
TTTGGGATACCTCAATACGG+TGG 0.761140 tig0006806:-40190 Msa1344310:CDS
GAATGCTTGGAGAACAACGG+TGG 0.785107 tig0006806:-37960 Msa1344310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACAAGTTTTTTTTTTTTTTA+AGG - tig0006806:37416-37435 Msa1344310:intron 10.0%
!!! TATGAAGTTATATATTTTAA+CGG + tig0006806:37561-37580 None:intergenic 10.0%
!!! CTTGTTTTTAATATTTTTTT+TGG - tig0006806:38422-38441 Msa1344310:intron 10.0%
!!! TTTTAAGTCTTTTTATTATA+TGG + tig0006806:39583-39602 None:intergenic 10.0%
!! AATATAAAAGGAAAAAAAGT+GGG + tig0006806:34356-34375 None:intergenic 15.0%
!! TAATATAAAAGGAAAAAAAG+TGG + tig0006806:34357-34376 None:intergenic 15.0%
!! TTGATATTAAAAAGATTGAA+AGG - tig0006806:36331-36350 Msa1344310:intron 15.0%
!! TTACTTGTAATTGAAAAAAA+TGG - tig0006806:37178-37197 Msa1344310:intron 15.0%
!! AGATTTGAAAAATAAAAATG+AGG + tig0006806:37296-37315 None:intergenic 15.0%
!! CAAAAATAAAATGAAACTTT+AGG + tig0006806:37461-37480 None:intergenic 15.0%
!! ATAGTGATTTAAAAATGAAA+TGG + tig0006806:37500-37519 None:intergenic 15.0%
!!! ATAATTTATAAGTTTTCAAC+AGG + tig0006806:37896-37915 None:intergenic 15.0%
!! TATAGTTTCAGTAAAAATAT+AGG - tig0006806:37927-37946 Msa1344310:CDS 15.0%
!! TTTATAGCAAAATTCATTAA+TGG - tig0006806:38550-38569 Msa1344310:intron 15.0%
!! TTATAGCAAAATTCATTAAT+GGG - tig0006806:38551-38570 Msa1344310:intron 15.0%
!! AACAAAACAAAAGGAAATTA+TGG + tig0006806:34298-34317 None:intergenic 20.0%
!!! GCAGCTTTTTTTAATATAAA+AGG + tig0006806:34368-34387 None:intergenic 20.0%
!!! TTTTTTATTCTTCTGCTAAT+GGG + tig0006806:34456-34475 None:intergenic 20.0%
!!! ATTTATGTGTTTTTTTTAGC+TGG - tig0006806:34846-34865 Msa1344310:intron 20.0%
!! AAACAATTATAACAATCAAC+TGG + tig0006806:34903-34922 None:intergenic 20.0%
!!! TTATTTTGCTATAGAAATAG+AGG - tig0006806:35242-35261 Msa1344310:intron 20.0%
!!! TGTTGATAATCAAATACTTA+TGG - tig0006806:35395-35414 Msa1344310:intron 20.0%
!! AATACTTATGGAGTTAAATT+TGG - tig0006806:35407-35426 Msa1344310:intron 20.0%
!! ATACTTATGGAGTTAAATTT+GGG - tig0006806:35408-35427 Msa1344310:intron 20.0%
!! TGAAGAAAAATTAATAACCA+TGG - tig0006806:35626-35645 Msa1344310:intron 20.0%
!!! ATGTTACTGATTTTCAAATT+AGG - tig0006806:36162-36181 Msa1344310:intron 20.0%
!! ATCTTGTACAATCAATTAAA+CGG + tig0006806:36453-36472 None:intergenic 20.0%
!!! TTTAACAAACTAGTTTTTGT+AGG - tig0006806:36495-36514 Msa1344310:intron 20.0%
!!! TTTTCTGATAGATATTGATA+TGG - tig0006806:36604-36623 Msa1344310:intron 20.0%
!! TAAACATGAATATAGAAAAC+TGG + tig0006806:36983-37002 None:intergenic 20.0%
!!! ATATATGTGAATATTTTCTC+AGG - tig0006806:37002-37021 Msa1344310:intron 20.0%
!! TTTGAAAAATAAAAATGAGG+AGG + tig0006806:37293-37312 None:intergenic 20.0%
!!! TTAAGGTTAAATTGCTTTTT+AGG - tig0006806:37433-37452 Msa1344310:intron 20.0%
!! TATAACTTCATAATAAGTTG+AGG - tig0006806:37569-37588 Msa1344310:intron 20.0%
!! AAAAGGTTAAATTACTCTAT+AGG + tig0006806:37955-37974 None:intergenic 20.0%
!! TGAACACACATTATTAAAAA+AGG + tig0006806:37972-37991 None:intergenic 20.0%
!!! CTTAGTATTTGAAATTTTGT+TGG - tig0006806:38148-38167 Msa1344310:CDS 20.0%
!! AAATATTAAAAACAAGATCC+AGG + tig0006806:38418-38437 None:intergenic 20.0%
!! TAAAATATTAGTAGAATCCA+TGG - tig0006806:38511-38530 Msa1344310:CDS 20.0%
!!! TTTTCAATTTGACAAGTTTT+TGG - tig0006806:38812-38831 Msa1344310:CDS 20.0%
!!! TTTCTTTTTTTATTTCCACT+CGG - tig0006806:38998-39017 Msa1344310:CDS 20.0%
!! TTTGTGTTAAAACTTAAAAC+GGG + tig0006806:39045-39064 None:intergenic 20.0%
!! GTTTGTGTTAAAACTTAAAA+CGG + tig0006806:39046-39065 None:intergenic 20.0%
!! AAGTAAAAAAGAAGTAATGT+TGG - tig0006806:39150-39169 Msa1344310:CDS 20.0%
!! AGTAAAAAAGAAGTAATGTT+GGG - tig0006806:39151-39170 Msa1344310:CDS 20.0%
!!! TTTTTGCTTATATTTGTGTT+CGG - tig0006806:39356-39375 Msa1344310:intron 20.0%
!!! CTTTTTTCATATTTCCTTTT+TGG - tig0006806:39835-39854 Msa1344310:intron 20.0%
!! ATCTTGTATAAACATAGAAA+GGG + tig0006806:40057-40076 None:intergenic 20.0%
!! AATCTTGTATAAACATAGAA+AGG + tig0006806:40058-40077 None:intergenic 20.0%
!! CTATGTTTATACAAGATTTA+TGG - tig0006806:40060-40079 Msa1344310:intron 20.0%
!!! TGATTTTTAAACAAAAAAGC+TGG + tig0006806:40114-40133 None:intergenic 20.0%
!! TTTACTTCATAGTATTTGAT+TGG - tig0006806:40211-40230 Msa1344310:CDS 20.0%
!!! GAAATTATGGTTGTTTTTCT+CGG + tig0006806:34285-34304 None:intergenic 25.0%
!! ATTTTTACGATGTTTGAGAA+AGG + tig0006806:34321-34340 None:intergenic 25.0%
!! TTCAGAAATTGATTCTGTTA+CGG + tig0006806:34407-34426 None:intergenic 25.0%
!!! GTTTTTTATTCTTCTGCTAA+TGG + tig0006806:34457-34476 None:intergenic 25.0%
!!! TCTTCTATGGGTTTATTTTT+AGG - tig0006806:34496-34515 Msa1344310:CDS 25.0%
!!! CTTCTATGGGTTTATTTTTA+GGG - tig0006806:34497-34516 Msa1344310:CDS 25.0%
! TATCCAAAGGATAATCAAAA+GGG - tig0006806:34682-34701 Msa1344310:intron 25.0%
!!! ATGATTCTGAAACTTGATTT+TGG - tig0006806:34790-34809 Msa1344310:intron 25.0%
!!! TGATTCTGAAACTTGATTTT+GGG - tig0006806:34791-34810 Msa1344310:intron 25.0%
!! AGGTTTTCAAAGTTTTACTT+AGG - tig0006806:35093-35112 Msa1344310:CDS 25.0%
!! GGTTTTCAAAGTTTTACTTA+GGG - tig0006806:35094-35113 Msa1344310:CDS 25.0%
! TTAAATCAGTGAATTCAAAC+AGG + tig0006806:35120-35139 None:intergenic 25.0%
!!! AATTCACTGATTTAAGCTTA+TGG - tig0006806:35125-35144 Msa1344310:CDS 25.0%
! ATCCATTCAAACAAACTAAA+GGG + tig0006806:35337-35356 None:intergenic 25.0%
! AATCCATTCAAACAAACTAA+AGG + tig0006806:35338-35357 None:intergenic 25.0%
!!! TTTAGTTTGTTTGAATGGAT+TGG - tig0006806:35337-35356 Msa1344310:intron 25.0%
!!! AAGTTTTAAAATGTTCTCTC+TGG - tig0006806:35496-35515 Msa1344310:intron 25.0%
! AAATTAAAGAAAGCCATAAG+TGG - tig0006806:35735-35754 Msa1344310:intron 25.0%
!! GAATTTGTGAAGGATTTTAA+GGG - tig0006806:35882-35901 Msa1344310:intron 25.0%
! ATGTGGTTATTGAAAATTTG+AGG - tig0006806:36081-36100 Msa1344310:intron 25.0%
!!! TGTATTTTTTCTCCTTCATT+GGG + tig0006806:36190-36209 None:intergenic 25.0%
!!! TTGTATTTTTTCTCCTTCAT+TGG + tig0006806:36191-36210 None:intergenic 25.0%
! TATGATTATTCAATATCTGC+AGG - tig0006806:36306-36325 Msa1344310:intron 25.0%
!! CAAAACAGAATTTTCAGAAT+CGG + tig0006806:36376-36395 None:intergenic 25.0%
!! TCTATCAGAAAAGCATATAT+AGG + tig0006806:36596-36615 None:intergenic 25.0%
!! ATTTTACTATCTCTTAGTCA+TGG - tig0006806:36757-36776 Msa1344310:CDS 25.0%
!! TTTTACTATCTCTTAGTCAT+GGG - tig0006806:36758-36777 Msa1344310:CDS 25.0%
! TTTACCAATCAAAAAGAATC+AGG + tig0006806:36820-36839 None:intergenic 25.0%
! TTTGATTGGTAAACCTTATT+TGG - tig0006806:36827-36846 Msa1344310:intron 25.0%
! TTATGCAAATAGAGAAGTAA+GGG + tig0006806:37125-37144 None:intergenic 25.0%
! TTTATGCAAATAGAGAAGTA+AGG + tig0006806:37126-37145 None:intergenic 25.0%
! AAAAATGGCAAAGATTGATT+TGG - tig0006806:37193-37212 Msa1344310:intron 25.0%
!! AAAATGGCAAAGATTGATTT+GGG - tig0006806:37194-37213 Msa1344310:intron 25.0%
!! TGACAATATCTTTTATTCCT+TGG + tig0006806:37261-37280 None:intergenic 25.0%
! TAAAAATGAAATGGAACAGA+AGG + tig0006806:37491-37510 None:intergenic 25.0%
!!! TTGTTTCTATAGGTTATCTT+GGG + tig0006806:37704-37723 None:intergenic 25.0%
!!! ATTGTTTCTATAGGTTATCT+TGG + tig0006806:37705-37724 None:intergenic 25.0%
!!! TCTGCATATATTGTTTCTAT+AGG + tig0006806:37714-37733 None:intergenic 25.0%
! TATAGAAACAATATATGCAG+AGG - tig0006806:37713-37732 Msa1344310:intron 25.0%
!! AAGAACATTTTTGAACATGT+AGG - tig0006806:37867-37886 Msa1344310:intron 25.0%
!!! TTCATTCAACTAGTTTCTTT+TGG - tig0006806:37996-38015 Msa1344310:intron 25.0%
!!! TCATTCAACTAGTTTCTTTT+GGG - tig0006806:37997-38016 Msa1344310:intron 25.0%
! TTGGTCTATTAATCCATAAT+TGG - tig0006806:38167-38186 Msa1344310:intron 25.0%
! TAATATTGTTGTCATGTAAG+TGG - tig0006806:38461-38480 Msa1344310:CDS 25.0%
! AAAAAGAAGTCAATAAACCA+TGG + tig0006806:38531-38550 None:intergenic 25.0%
! AATTCATTAATGGGATTACA+TGG - tig0006806:38560-38579 Msa1344310:intron 25.0%
! ATTCATTAATGGGATTACAT+GGG - tig0006806:38561-38580 Msa1344310:intron 25.0%
!!! TAACGCTATTTTGTTGTAAT+GGG + tig0006806:38596-38615 None:intergenic 25.0%
!!! TTAACGCTATTTTGTTGTAA+TGG + tig0006806:38597-38616 None:intergenic 25.0%
! TGGCATCAAAACATTATTAT+GGG + tig0006806:38714-38733 None:intergenic 25.0%
! ATGGCATCAAAACATTATTA+TGG + tig0006806:38715-38734 None:intergenic 25.0%
! GATGTATATGTTGTATTTGA+TGG + tig0006806:38734-38753 None:intergenic 25.0%
! AAGTTGAATCAAGTCAATAA+AGG + tig0006806:38767-38786 None:intergenic 25.0%
!!! TTTATTGACTTGATTCAACT+TGG - tig0006806:38766-38785 Msa1344310:CDS 25.0%
! AAACCCAAGTTCATAATTTA+TGG - tig0006806:38844-38863 Msa1344310:CDS 25.0%
! TCTCCATAAATTATGAACTT+GGG + tig0006806:38850-38869 None:intergenic 25.0%
! TTCTCCATAAATTATGAACT+TGG + tig0006806:38851-38870 None:intergenic 25.0%
!! AAGAAAAGTTGCTTTCATTT+GGG + tig0006806:38984-39003 None:intergenic 25.0%
!! AAAGAAAAGTTGCTTTCATT+TGG + tig0006806:38985-39004 None:intergenic 25.0%
! AGAATGAAATTTGAACTGAT+GGG + tig0006806:39245-39264 None:intergenic 25.0%
! AGTTCAAATTTCATTCTCAT+GGG - tig0006806:39248-39267 Msa1344310:CDS 25.0%
!!! TGGGAATGTAATTTGTTTTT+TGG - tig0006806:39267-39286 Msa1344310:CDS 25.0%
!! TAACGTACATCATTTTCAAT+GGG - tig0006806:39406-39425 Msa1344310:intron 25.0%
!! TTTTTGCTTATATTTGAGTC+CGG - tig0006806:39514-39533 Msa1344310:intron 25.0%
! TAATTCTGTATTTGTAGACA+AGG + tig0006806:39962-39981 None:intergenic 25.0%
! TTGTCTACAAATACAGAATT+AGG - tig0006806:39961-39980 Msa1344310:intron 25.0%
! TGTCTACAAATACAGAATTA+GGG - tig0006806:39962-39981 Msa1344310:intron 25.0%
! TCTTGTATAAACATAGAAAG+GGG + tig0006806:40056-40075 None:intergenic 25.0%
! TTTAAACAAAAAAGCTGGTA+TGG + tig0006806:40109-40128 None:intergenic 25.0%
!!! ATACATGGATTCTGAAATAA+GGG - tig0006806:40272-40291 Msa1344310:CDS 25.0%
! GATAGATGTCATGTATTATT+CGG - tig0006806:40517-40536 Msa1344310:five_prime_UTR 25.0%
!!! GTCATTTCAGTAGATTTTTT+AGG - tig0006806:40591-40610 Msa1344310:five_prime_UTR 25.0%
CTTTCTTTACCAACAAACAA+AGG - tig0006806:34252-34271 Msa1344310:three_prime_UTR 30.0%
TGAGAAAGGAACAAAACAAA+AGG + tig0006806:34307-34326 None:intergenic 30.0%
! AGAAGAACTTCGAATTTTCA+TGG + tig0006806:34479-34498 None:intergenic 30.0%
AATTCGAAGTTCTTCTTCTA+TGG - tig0006806:34483-34502 Msa1344310:CDS 30.0%
ATTCGAAGTTCTTCTTCTAT+GGG - tig0006806:34484-34503 Msa1344310:CDS 30.0%
TATGTTCCTTTGATACTATC+CGG + tig0006806:34598-34617 None:intergenic 30.0%
GTATCCAAAGGATAATCAAA+AGG - tig0006806:34681-34700 Msa1344310:intron 30.0%
ATTTCCTTTAAATCTAAGCC+TGG - tig0006806:34730-34749 Msa1344310:intron 30.0%
!! TAGTTCTGAGAAATTGATCA+CGG - tig0006806:35440-35459 Msa1344310:intron 30.0%
AGAGAACATAACAATACCAT+CGG - tig0006806:35686-35705 Msa1344310:intron 30.0%
TGGTTAACGTAAATCTTGAT+TGG - tig0006806:35766-35785 Msa1344310:intron 30.0%
AGTTAAATGCGATATGTTGA+TGG - tig0006806:35860-35879 Msa1344310:intron 30.0%
! TATGTTGATGGAATTTGTGA+AGG - tig0006806:35872-35891 Msa1344310:intron 30.0%
! GGAATTTGTGAAGGATTTTA+AGG - tig0006806:35881-35900 Msa1344310:intron 30.0%
ACAGTACCAAGTAATATAGT+GGG + tig0006806:35952-35971 None:intergenic 30.0%
!! ATTGCTTTTGATGTTTTCCT+AGG - tig0006806:36260-36279 Msa1344310:intron 30.0%
!! TTGCTTTTGATGTTTTCCTA+GGG - tig0006806:36261-36280 Msa1344310:intron 30.0%
! TAAAAAGATTGAAAGGTGCA+TGG - tig0006806:36338-36357 Msa1344310:intron 30.0%
! AAAAAGATTGAAAGGTGCAT+GGG - tig0006806:36339-36358 Msa1344310:intron 30.0%
! AAAGTAATAAAGGCATACCT+GGG + tig0006806:36415-36434 None:intergenic 30.0%
! TAAAGTAATAAAGGCATACC+TGG + tig0006806:36416-36435 None:intergenic 30.0%
!!! ACAAACTAGTTTTTGTAGGT+TGG - tig0006806:36499-36518 Msa1344310:intron 30.0%
!!! CAAACTAGTTTTTGTAGGTT+GGG - tig0006806:36500-36519 Msa1344310:intron 30.0%
!!! CTATTCAATTTTGTTTCTGC+AGG - tig0006806:36647-36666 Msa1344310:intron 30.0%
!!! TTTTGTTTCTGCAGGAAAAT+TGG - tig0006806:36655-36674 Msa1344310:intron 30.0%
GTTATGAAAGCTATTTGTTC+TGG - tig0006806:36689-36708 Msa1344310:intron 30.0%
TTTACTATCTCTTAGTCATG+GGG - tig0006806:36759-36778 Msa1344310:CDS 30.0%
! CAAACCTGATTCTTTTTGAT+TGG - tig0006806:36813-36832 Msa1344310:intron 30.0%
! GATTTGGGATGATTCATATT+TGG - tig0006806:37209-37228 Msa1344310:intron 30.0%
ATCTGTTACACTTCACTTAA+TGG - tig0006806:37312-37331 Msa1344310:intron 30.0%
AATAGATCTCTAGTAGTTGA+TGG - tig0006806:37535-37554 Msa1344310:intron 30.0%
GTTCATGAGTATTTATGCAT+AGG + tig0006806:37782-37801 None:intergenic 30.0%
TCTTGCAGTATGTATAACTA+GGG + tig0006806:37851-37870 None:intergenic 30.0%
TTCTTGCAGTATGTATAACT+AGG + tig0006806:37852-37871 None:intergenic 30.0%
TCAGGATTCAATTCCAATTA+TGG + tig0006806:38183-38202 None:intergenic 30.0%
!! ACTTATTTCTTTGCTTTTGC+TGG - tig0006806:38332-38351 Msa1344310:intron 30.0%
TGGATAACCATAATACTTCA+AGG + tig0006806:38364-38383 None:intergenic 30.0%
! AAGATCCAGGATTCTATTTT+GGG + tig0006806:38405-38424 None:intergenic 30.0%
TTCATTAATGGGATTACATG+GGG - tig0006806:38562-38581 Msa1344310:intron 30.0%
TCAAAACATTATTATGGGCT+TGG + tig0006806:38709-38728 None:intergenic 30.0%
!!! TTGGATTAGTTTTTAGCTTG+TGG - tig0006806:38785-38804 Msa1344310:CDS 30.0%
AAAAAAGAAGTAATGTTGGG+TGG - tig0006806:39154-39173 Msa1344310:CDS 30.0%
GAGAATGAAATTTGAACTGA+TGG + tig0006806:39246-39265 None:intergenic 30.0%
CAGTTCAAATTTCATTCTCA+TGG - tig0006806:39247-39266 Msa1344310:CDS 30.0%
! CACTGATTAAGAATCATCAA+TGG + tig0006806:39324-39343 None:intergenic 30.0%
CATTGAAAATGATGTACGTT+AGG + tig0006806:39407-39426 None:intergenic 30.0%
! CTAACGTACATCATTTTCAA+TGG - tig0006806:39405-39424 Msa1344310:intron 30.0%
!! AATTACGCACTGATTAAGAA+TGG + tig0006806:39331-39350 None:intergenic 30.0%
TTATCAAGACACAAGAGTAA+TGG - tig0006806:39542-39561 Msa1344310:intron 30.0%
ATACAGAATTAGGGTAAGTT+TGG - tig0006806:39971-39990 Msa1344310:intron 30.0%
AAAGCTGGTATGGAAATTAA+TGG + tig0006806:40099-40118 None:intergenic 30.0%
TCATTTATTTCATGCTTCTG+TGG - tig0006806:40167-40186 Msa1344310:CDS 30.0%
!! TGTATTTTTGCAGTCATACA+TGG - tig0006806:40257-40276 Msa1344310:CDS 30.0%
!! CATACATGGATTCTGAAATA+AGG - tig0006806:40271-40290 Msa1344310:CDS 30.0%
CATGATTTACAACTTCTGAT+TGG + tig0006806:40329-40348 None:intergenic 30.0%
! AGAATTCTGAAAAGGGAAAA+AGG + tig0006806:40440-40459 None:intergenic 30.0%
! AATGCTCAGAATTCTGAAAA+GGG + tig0006806:40447-40466 None:intergenic 30.0%
TAGCAAGTTGTATACTTGAA+AGG - tig0006806:40544-40563 Msa1344310:five_prime_UTR 30.0%
TACTTGAAAGGACTGAATTT+AGG - tig0006806:40556-40575 Msa1344310:five_prime_UTR 30.0%
TTACAAATCACAATCATGAG+TGG + tig0006806:40640-40659 None:intergenic 30.0%
!! ACCTATTTTGCTTTTAGTAC+AGG - tig0006806:40659-40678 Msa1344310:five_prime_UTR 30.0%
TCCTGTACTAAAAGCAAAAT+AGG + tig0006806:40663-40682 None:intergenic 30.0%
!! TATTTTGCTTTTAGTACAGG+AGG - tig0006806:40662-40681 Msa1344310:five_prime_UTR 30.0%
GTAAAGAAAGTAACAGAGGA+AGG + tig0006806:34242-34261 None:intergenic 35.0%
! GTTGGTAAAGAAAGTAACAG+AGG + tig0006806:34246-34265 None:intergenic 35.0%
! ATTGATTCTGTTACGGAGAA+GGG + tig0006806:34400-34419 None:intergenic 35.0%
! AATTGATTCTGTTACGGAGA+AGG + tig0006806:34401-34420 None:intergenic 35.0%
! GGTTTTCGATTTCCTGAAAT+GGG + tig0006806:34435-34454 None:intergenic 35.0%
! ATAGTGCGATTGGTAACTTT+GGG - tig0006806:34620-34639 Msa1344310:intron 35.0%
!! AACTTTGGGATACCTCAATA+CGG - tig0006806:34634-34653 Msa1344310:intron 35.0%
!! CAACCCTTTTGATTATCCTT+TGG + tig0006806:34688-34707 None:intergenic 35.0%
TGTAAAGAGTTTGATGAGTC+TGG - tig0006806:34706-34725 Msa1344310:intron 35.0%
GTAAAGAGTTTGATGAGTCT+GGG - tig0006806:34707-34726 Msa1344310:intron 35.0%
!! AGTGTTACTGACTTGTTGTT+TGG - tig0006806:34954-34973 Msa1344310:CDS 35.0%
! GCATGCTAGATTTAGTCTTT+AGG - tig0006806:35073-35092 Msa1344310:CDS 35.0%
TTAAGCTTATGGAAAGCTCT+TGG - tig0006806:35136-35155 Msa1344310:CDS 35.0%
CTTATTTCCATAAGCTTTCC+AGG - tig0006806:35181-35200 Msa1344310:intron 35.0%
!!! AGTTTTTTCCATAAGCTACC+TGG + tig0006806:35202-35221 None:intergenic 35.0%
!! GTCCCTTTAGTTTGTTTGAA+TGG - tig0006806:35332-35351 Msa1344310:intron 35.0%
!! AATGGATTGGTTGTTTGAGA+TGG - tig0006806:35350-35369 Msa1344310:intron 35.0%
!! AGTTCTGAGAAATTGATCAC+GGG - tig0006806:35441-35460 Msa1344310:intron 35.0%
!!! AGGTTGCTTTTTTGCTTTGA+AGG - tig0006806:35551-35570 Msa1344310:intron 35.0%
! GCTCTCATCGAAAAGAATTT+TGG - tig0006806:35708-35727 Msa1344310:intron 35.0%
TTAAAGAAAGCCATAAGTGG+TGG - tig0006806:35738-35757 Msa1344310:intron 35.0%
GCACAAATATTAGAGAAAGG+TGG - tig0006806:35909-35928 Msa1344310:intron 35.0%
! AATATAGTGGGGTGTAAACT+GGG + tig0006806:35940-35959 None:intergenic 35.0%
! TAATATAGTGGGGTGTAAAC+TGG + tig0006806:35941-35960 None:intergenic 35.0%
TTACACCCCACTATATTACT+TGG - tig0006806:35943-35962 Msa1344310:intron 35.0%
CAGTACCAAGTAATATAGTG+GGG + tig0006806:35951-35970 None:intergenic 35.0%
GACAGTACCAAGTAATATAG+TGG + tig0006806:35953-35972 None:intergenic 35.0%
AAATGAAACCAAAAAGCCCT+GGG - tig0006806:36127-36146 Msa1344310:intron 35.0%
!! AAGTTGTTTTCAAGAACCCT+AGG + tig0006806:36280-36299 None:intergenic 35.0%
!! TAGTTTTTGTAGGTTGGGAA+GGG - tig0006806:36505-36524 Msa1344310:intron 35.0%
TTACTATCTCTTAGTCATGG+GGG - tig0006806:36760-36779 Msa1344310:CDS 35.0%
AATGAATGCTTGGAGAACAA+CGG - tig0006806:36864-36883 Msa1344310:intron 35.0%
TGTGATCAGTTCTGTGTATT+AGG - tig0006806:37368-37387 Msa1344310:intron 35.0%
GTGATCAGTTCTGTGTATTA+GGG - tig0006806:37369-37388 Msa1344310:intron 35.0%
GGTGTTTGTAAGAGCTTATT+TGG - tig0006806:37611-37630 Msa1344310:intron 35.0%
AGTGTTTGGAAGAGCTTATT+TGG - tig0006806:37666-37685 Msa1344310:intron 35.0%
TTGCAGTATGTATAACTAGG+GGG + tig0006806:37849-37868 None:intergenic 35.0%
CTTGCAGTATGTATAACTAG+GGG + tig0006806:37850-37869 None:intergenic 35.0%
TTGTTTATCTTACACCTTCC+AGG + tig0006806:38038-38057 None:intergenic 35.0%
! GGAAGGTGTAAGATAAACAA+TGG - tig0006806:38038-38057 Msa1344310:intron 35.0%
AGGTGTAAGATAAACAATGG+AGG - tig0006806:38041-38060 Msa1344310:intron 35.0%
AGATAAACAATGGAGGTTGT+TGG - tig0006806:38048-38067 Msa1344310:intron 35.0%
! ACATGCATTTTCTGCTTGTT+CGG - tig0006806:38088-38107 Msa1344310:intron 35.0%
AGGGTATGACAATTTATGTC+AGG + tig0006806:38201-38220 None:intergenic 35.0%
! GAGTGAACCTTGAAGTATTA+TGG - tig0006806:38354-38373 Msa1344310:intron 35.0%
ATACACCCAAAATAGAATCC+TGG - tig0006806:38397-38416 Msa1344310:intron 35.0%
! CAAGATCCAGGATTCTATTT+TGG + tig0006806:38406-38425 None:intergenic 35.0%
TATGCATCAATTTCTCCTCT+TGG + tig0006806:38652-38671 None:intergenic 35.0%
! TACGTTGGTTACTTTGGTTT+CGG - tig0006806:38670-38689 Msa1344310:CDS 35.0%
!! CAAGTCAATAAAGGTACTGT+TGG + tig0006806:38758-38777 None:intergenic 35.0%
!! GGGATTTTGATCTCAAACAT+CGG + tig0006806:39025-39044 None:intergenic 35.0%
GAAATTTGAACTGATGGGAA+GGG + tig0006806:39240-39259 None:intergenic 35.0%
TGAAATTTGAACTGATGGGA+AGG + tig0006806:39241-39260 None:intergenic 35.0%
TTGCTTATATTTGTGTTCGG+AGG - tig0006806:39359-39378 Msa1344310:intron 35.0%
TGCTTATATTTGTGTTCGGA+GGG - tig0006806:39360-39379 Msa1344310:intron 35.0%
TATTCTTGCAGCTACATTCA+GGG + tig0006806:39694-39713 None:intergenic 35.0%
!! TTTCCTTTTTGGTATTCTGC+AGG - tig0006806:39846-39865 Msa1344310:intron 35.0%
TTACCTGCAGAATACCAAAA+AGG + tig0006806:39852-39871 None:intergenic 35.0%
TCATATAACGTCACCAAACT+GGG + tig0006806:40006-40025 None:intergenic 35.0%
! TGAAAAGGGAAAAAGGTACA+AGG + tig0006806:40433-40452 None:intergenic 35.0%
! CAATGCTCAGAATTCTGAAA+AGG + tig0006806:40448-40467 None:intergenic 35.0%
! GGTTGAGTTCCTTTGTTTGT+TGG + tig0006806:34264-34283 None:intergenic 40.0%
!! TTCTGAAACCAACCCATTTC+AGG - tig0006806:34420-34439 Msa1344310:three_prime_UTR 40.0%
TTCGATTTCCTGAAATGGGT+TGG + tig0006806:34431-34450 None:intergenic 40.0%
! GGGTTTTCGATTTCCTGAAA+TGG + tig0006806:34436-34455 None:intergenic 40.0%
ACGAATTTCGCCATTGATGA+AGG + tig0006806:34544-34563 None:intergenic 40.0%
TTCATCAATGGCGAAATTCG+TGG - tig0006806:34543-34562 Msa1344310:CDS 40.0%
ACTTCACCGGATAGTATCAA+AGG - tig0006806:34589-34608 Msa1344310:intron 40.0%
! GATAGTGCGATTGGTAACTT+TGG - tig0006806:34619-34638 Msa1344310:intron 40.0%
AGCACCAGGCTTAGATTTAA+AGG + tig0006806:34737-34756 None:intergenic 40.0%
CGATCGAGCAAAACAATAGT+GGG + tig0006806:34763-34782 None:intergenic 40.0%
ACGATCGAGCAAAACAATAG+TGG + tig0006806:34764-34783 None:intergenic 40.0%
!! ACTATTGTTTTGCTCGATCG+TGG - tig0006806:34763-34782 Msa1344310:intron 40.0%
TAAGCTACCTGGAAAGCTTA+TGG + tig0006806:35191-35210 None:intergenic 40.0%
TAAGCTTTCCAGGTAGCTTA+TGG - tig0006806:35191-35210 Msa1344310:intron 40.0%
! GTTGTTTGAGATGGCTCTTT+AGG - tig0006806:35359-35378 Msa1344310:intron 40.0%
!! GTCTTTTACGTGTTTGTTGC+AGG - tig0006806:35531-35550 Msa1344310:intron 40.0%
!!! GCTTTTTTGCTTTGAAGGTG+TGG - tig0006806:35556-35575 Msa1344310:intron 40.0%
AGCTTCTTCTGTTCTTGTTG+CGG - tig0006806:35596-35615 Msa1344310:intron 40.0%
AACCATATCTCCACCACTTA+TGG + tig0006806:35751-35770 None:intergenic 40.0%
CGTAAATCTTGATTGGAGAG+AGG - tig0006806:35773-35792 Msa1344310:intron 40.0%
!! TGTGAAGGATTTTAAGGGTG+CGG - tig0006806:35887-35906 Msa1344310:intron 40.0%
GCGGCACAAATATTAGAGAA+AGG - tig0006806:35906-35925 Msa1344310:intron 40.0%
TATTACTTGGTACTGTCCTC+AGG - tig0006806:35956-35975 Msa1344310:intron 40.0%
TTACTTAACGTGAATGCCTG+AGG + tig0006806:35975-35994 None:intergenic 40.0%
AAGTCTCAGTGCATTAACCA+TGG - tig0006806:36002-36021 Msa1344310:intron 40.0%
! GAGGCAGTTATGTGTTTTCA+AGG - tig0006806:36100-36119 Msa1344310:intron 40.0%
CAAATGAAACCAAAAAGCCC+TGG - tig0006806:36126-36145 Msa1344310:intron 40.0%
TCAAATTAGGTGCCCAATGA+AGG - tig0006806:36175-36194 Msa1344310:intron 40.0%
GATGCTGTCATTGAATCACT+TGG - tig0006806:36224-36243 Msa1344310:intron 40.0%
! GAATTTTCAGAATCGGCATC+TGG + tig0006806:36369-36388 None:intergenic 40.0%
!! CTAGTTTTTGTAGGTTGGGA+AGG - tig0006806:36504-36523 Msa1344310:intron 40.0%
GACAACTAGAGTAGGCAATA+TGG + tig0006806:36548-36567 None:intergenic 40.0%
TCTGCAGGAAAATTGGAGAA+AGG - tig0006806:36662-36681 Msa1344310:intron 40.0%
! TGGTAAACCTTATTTGGCAG+AGG - tig0006806:36833-36852 Msa1344310:intron 40.0%
! TAAACCTTATTTGGCAGAGG+TGG - tig0006806:36836-36855 Msa1344310:intron 40.0%
AGCTAACATAACTGCATGCA+AGG - tig0006806:36908-36927 Msa1344310:intron 40.0%
! TTTTCTCAGGATACTTTCCG+TGG - tig0006806:37015-37034 Msa1344310:intron 40.0%
TTTCTCAGGATACTTTCCGT+GGG - tig0006806:37016-37035 Msa1344310:intron 40.0%
GATGGTTATACGACTTGTGA+AGG - tig0006806:37084-37103 Msa1344310:intron 40.0%
CATTGATCTGTGTTCTTCCA+AGG - tig0006806:37241-37260 Msa1344310:intron 40.0%
! ACACTTCACTTAATGGACAG+AGG - tig0006806:37319-37338 Msa1344310:intron 40.0%
! CACTTCACTTAATGGACAGA+GGG - tig0006806:37320-37339 Msa1344310:intron 40.0%
! ACTTCACTTAATGGACAGAG+GGG - tig0006806:37321-37340 Msa1344310:intron 40.0%
AGTTCTGTGTATTAGGGAAG+AGG - tig0006806:37375-37394 Msa1344310:intron 40.0%
GTTCTGTGTATTAGGGAAGA+GGG - tig0006806:37376-37395 Msa1344310:intron 40.0%
TTCTGTGTATTAGGGAAGAG+GGG - tig0006806:37377-37396 Msa1344310:intron 40.0%
TGAGGCCTAATTGAAATCTG+AGG - tig0006806:37587-37606 Msa1344310:intron 40.0%
CACCACCTCAGATTTCAATT+AGG + tig0006806:37595-37614 None:intergenic 40.0%
TCCAAACACTTGCAGCAAAA+GGG + tig0006806:37656-37675 None:intergenic 40.0%
TTCCAAACACTTGCAGCAAA+AGG + tig0006806:37657-37676 None:intergenic 40.0%
!!! TCTTTTGGGTTTACAGCTAG+TGG - tig0006806:38011-38030 Msa1344310:intron 40.0%
AGAAAATGCATGTCCATTCC+GGG + tig0006806:38081-38100 None:intergenic 40.0%
CAGAAAATGCATGTCCATTC+CGG + tig0006806:38082-38101 None:intergenic 40.0%
! CGGTTAGTTACCAAGTTTCT+TGG - tig0006806:38108-38127 Msa1344310:CDS 40.0%
ATTGTCATACCCTCATGAAC+AGG - tig0006806:38208-38227 Msa1344310:intron 40.0%
TACCCTCATGAACAGGATAA+TGG - tig0006806:38215-38234 Msa1344310:intron 40.0%
CTCCATTATCCTGTTCATGA+GGG + tig0006806:38220-38239 None:intergenic 40.0%
!! CTCATGAACAGGATAATGGA+GGG - tig0006806:38219-38238 Msa1344310:intron 40.0%
!! TCATGAACAGGATAATGGAG+GGG - tig0006806:38220-38239 Msa1344310:intron 40.0%
! GACGGTGTTAAAAATTGTGC+AGG - tig0006806:38275-38294 Msa1344310:CDS 40.0%
GGTGTATGTACTTAATGCTC+TGG + tig0006806:38384-38403 None:intergenic 40.0%
GGAGAAATTGATGCATACGT+TGG - tig0006806:38655-38674 Msa1344310:CDS 40.0%
! GATGCATACGTTGGTTACTT+TGG - tig0006806:38664-38683 Msa1344310:CDS 40.0%
ATATGAGAGCTTCTAAGTCG+AGG - tig0006806:38874-38893 Msa1344310:CDS 40.0%
!!! ACTGATGGGAAGGGTATTTT+GGG + tig0006806:39231-39250 None:intergenic 40.0%
!!! AACTGATGGGAAGGGTATTT+TGG + tig0006806:39232-39251 None:intergenic 40.0%
TTGCTTATATTTGAGTCCGG+AGG - tig0006806:39517-39536 Msa1344310:intron 40.0%
TGCTTATATTTGAGTCCGGA+GGG - tig0006806:39518-39537 Msa1344310:intron 40.0%
! TTGTGTCTTGATAATCCCTC+CGG + tig0006806:39536-39555 None:intergenic 40.0%
TCTGTGAGGAATAAGCACAA+AGG + tig0006806:39635-39654 None:intergenic 40.0%
TGCATTCATCAATGTCTGTG+AGG + tig0006806:39649-39668 None:intergenic 40.0%
CACAGACATTGATGAATGCA+AGG - tig0006806:39649-39668 Msa1344310:intron 40.0%
GTATTCTTGCAGCTACATTC+AGG + tig0006806:39695-39714 None:intergenic 40.0%
AATGTAGCTGCAAGAATACC+TGG - tig0006806:39696-39715 Msa1344310:intron 40.0%
ATGTAGCTGCAAGAATACCT+GGG - tig0006806:39697-39716 Msa1344310:intron 40.0%
TGGGGATCTTCTGTATATCA+GGG - tig0006806:39742-39761 Msa1344310:intron 40.0%
ACTCACTTATGCATGCATCA+TGG + tig0006806:39769-39788 None:intergenic 40.0%
!! GCATTTTGGGTCATTGTAGT+CGG - tig0006806:39909-39928 Msa1344310:intron 40.0%
GTCATATAACGTCACCAAAC+TGG + tig0006806:40007-40026 None:intergenic 40.0%
!! TTCTGAAATAAGGGCCATCA+TGG - tig0006806:40281-40300 Msa1344310:CDS 40.0%
TAGCTTAGAGAGAGAGAGAG+AGG + tig0006806:34177-34196 None:intergenic 45.0%
ATCGTTGACGCCTTCATCAA+TGG - tig0006806:34531-34550 Msa1344310:CDS 45.0%
ATCAATGGCGAAATTCGTGG+TGG - tig0006806:34546-34565 Msa1344310:CDS 45.0%
GGAACATACGATAGTGCGAT+TGG - tig0006806:34610-34629 Msa1344310:intron 45.0%
! TTTGGGATACCTCAATACGG+TGG - tig0006806:34637-34656 Msa1344310:intron 45.0%
TGGGAACGTTGTGTATCCAA+AGG - tig0006806:34669-34688 Msa1344310:intron 45.0%
!!! ACACCAACGCTGTTTTTGGA+TGG + tig0006806:35314-35333 None:intergenic 45.0%
AATAACCATGGACACACCTG+AGG - tig0006806:35638-35657 Msa1344310:intron 45.0%
! TTCTTTTCGATGAGAGCCGA+TGG + tig0006806:35705-35724 None:intergenic 45.0%
! AGCCATAAGTGGTGGAGATA+TGG - tig0006806:35746-35765 Msa1344310:intron 45.0%
CATACTCCACACGATCATCT+GGG + tig0006806:35809-35828 None:intergenic 45.0%
TCATACTCCACACGATCATC+TGG + tig0006806:35810-35829 None:intergenic 45.0%
ACCAACAGCAATGATGAGTG+TGG - tig0006806:35837-35856 Msa1344310:intron 45.0%
TCCACACTCATCATTGCTGT+TGG + tig0006806:35841-35860 None:intergenic 45.0%
TGAAATCTTGCTCGGGATCT+GGG + tig0006806:36040-36059 None:intergenic 45.0%
!! GATTTCAGCACCGGTTATGA+CGG - tig0006806:36053-36072 Msa1344310:intron 45.0%
!! ATTTCAGCACCGGTTATGAC+GGG - tig0006806:36054-36073 Msa1344310:intron 45.0%
CACATCTTTCCCGTCATAAC+CGG + tig0006806:36066-36085 None:intergenic 45.0%
CGACTGTTGACAACTAGAGT+AGG + tig0006806:36556-36575 None:intergenic 45.0%
GTCAACAGTCGACAATATCG+AGG - tig0006806:36565-36584 Msa1344310:CDS 45.0%
GGTGGAGACAAATGAATGCT+TGG - tig0006806:36854-36873 Msa1344310:intron 45.0%
AACTGCACACCATCTACCAA+GGG + tig0006806:37057-37076 None:intergenic 45.0%
GTAGATGGTGTGCAGTTCAA+AGG - tig0006806:37060-37079 Msa1344310:intron 45.0%
! CTTCACTTAATGGACAGAGG+GGG - tig0006806:37322-37341 Msa1344310:intron 45.0%
GGCCTAATTGAAATCTGAGG+TGG - tig0006806:37590-37609 Msa1344310:intron 45.0%
TCACAGTCGAAGAGTCAATC+AGG + tig0006806:37754-37773 None:intergenic 45.0%
CAGTATGTATAACTAGGGGG+CGG + tig0006806:37846-37865 None:intergenic 45.0%
CCTCCATTATCCTGTTCATG+AGG + tig0006806:38221-38240 None:intergenic 45.0%
! CCTCATGAACAGGATAATGG+AGG - tig0006806:38218-38237 Msa1344310:intron 45.0%
CACTTTGTAGACATGCCGAA+GGG - tig0006806:38618-38637 Msa1344310:CDS 45.0%
! CTCTTGGTGTACTAACCCTT+CGG + tig0006806:38636-38655 None:intergenic 45.0%
AACACAAACCAGCTGAAGCT+TGG - tig0006806:39057-39076 Msa1344310:CDS 45.0%
TGTAGCTGCAAGAATACCTG+GGG - tig0006806:39698-39717 Msa1344310:intron 45.0%
AGCTATAACTGCAGTTGCAG+TGG - tig0006806:39722-39741 Msa1344310:intron 45.0%
GCTATAACTGCAGTTGCAGT+GGG - tig0006806:39723-39742 Msa1344310:intron 45.0%
CTATAACTGCAGTTGCAGTG+GGG - tig0006806:39724-39743 Msa1344310:intron 45.0%
GTGGGGATCTTCTGTATATC+AGG - tig0006806:39741-39760 Msa1344310:intron 45.0%
! CATTGTAGTCGGCTTAGTTC+TGG - tig0006806:39920-39939 Msa1344310:intron 45.0%
TTGGTTGCATTCTCCCAGTT+TGG - tig0006806:39990-40009 Msa1344310:intron 45.0%
! ACTTCTGATTGGCTGTCCAA+GGG + tig0006806:40318-40337 None:intergenic 45.0%
! AACTTCTGATTGGCTGTCCA+AGG + tig0006806:40319-40338 None:intergenic 45.0%
AGTGAAACATGTCAGCCTGT+TGG - tig0006806:40370-40389 Msa1344310:exon 45.0%
!! TAAATAAATTAAAGTAATAA+AGG + tig0006806:36425-36444 None:intergenic 5.0%
!!! ATTACTTTAATTTATTTATT+TGG - tig0006806:36427-36446 Msa1344310:intron 5.0%
TGGTGGAGAAGAACAGCTTG+AGG - tig0006806:34563-34582 Msa1344310:intron 50.0%
GGTGGAGAAGAACAGCTTGA+GGG - tig0006806:34564-34583 Msa1344310:intron 50.0%
ACCTCAATACGGTGGTAGCA+TGG - tig0006806:34645-34664 Msa1344310:intron 50.0%
AATACGGTGGTAGCATGGCT+GGG - tig0006806:34650-34669 Msa1344310:intron 50.0%
!! ACAATAGTGGGAAGAGCACC+AGG + tig0006806:34751-34770 None:intergenic 50.0%
CGTCCATCCAAAAACAGCGT+TGG - tig0006806:35308-35327 Msa1344310:intron 50.0%
!! AGGGACACCAACGCTGTTTT+TGG + tig0006806:35318-35337 None:intergenic 50.0%
AGAAGAAGCTCCAGCCTTCT+GGG + tig0006806:35586-35605 None:intergenic 50.0%
ATCGTGTGGAGTATGAGCTG+TGG - tig0006806:35814-35833 Msa1344310:intron 50.0%
GAAATCTTGCTCGGGATCTG+GGG + tig0006806:36039-36058 None:intergenic 50.0%
CTGAAATCTTGCTCGGGATC+TGG + tig0006806:36041-36060 None:intergenic 50.0%
! ACCGGTGCTGAAATCTTGCT+CGG + tig0006806:36048-36067 None:intergenic 50.0%
! CGGTTATGACGGGAAAGATG+TGG - tig0006806:36064-36083 Msa1344310:intron 50.0%
AAACCAAAAAGCCCTGGGTG+TGG - tig0006806:36132-36151 Msa1344310:intron 50.0%
GAAAGAAGAGCAAGATGCCC+AGG - tig0006806:36395-36414 Msa1344310:intron 50.0%
CCACTGCTCAAACAAACAGC+TGG + tig0006806:36734-36753 None:intergenic 50.0%
CCAGCTGTTTGTTTGAGCAG+TGG - tig0006806:36731-36750 Msa1344310:intron 50.0%
GTCTCCACCTCTGCCAAATA+AGG + tig0006806:36843-36862 None:intergenic 50.0%
GAATGCTTGGAGAACAACGG+TGG - tig0006806:36867-36886 Msa1344310:intron 50.0%
TGGAGAACAACGGTGGTTGT+TGG - tig0006806:36874-36893 Msa1344310:intron 50.0%
GAACAACGGTGGTTGTTGGA+AGG - tig0006806:36878-36897 Msa1344310:intron 50.0%
TGTGAATGCCCCTTGGTAGA+TGG - tig0006806:37045-37064 Msa1344310:intron 50.0%
ACTGCACACCATCTACCAAG+GGG + tig0006806:37056-37075 None:intergenic 50.0%
GAACTGCACACCATCTACCA+AGG + tig0006806:37058-37077 None:intergenic 50.0%
GGTGTGCAGTTCAAAGGAGA+TGG - tig0006806:37066-37085 Msa1344310:intron 50.0%
! TTAATGGACAGAGGGGGTTC+AGG - tig0006806:37328-37347 Msa1344310:intron 50.0%
! TAATGGACAGAGGGGGTTCA+GGG - tig0006806:37329-37348 Msa1344310:intron 50.0%
! GCCCTTTTGCTGCAAGTGTT+TGG - tig0006806:37652-37671 Msa1344310:intron 50.0%
! TTACAGCTAGTGGACCTGGA+AGG - tig0006806:38021-38040 Msa1344310:intron 50.0%
! TGGTGGAGTGCCAAGAAACT+TGG + tig0006806:38121-38140 None:intergenic 50.0%
TTAGATGCGAGTGTCCTGCA+GGG - tig0006806:38243-38262 Msa1344310:intron 50.0%
GAGTGTCCTGCAGGGTTTAA+AGG - tig0006806:38251-38270 Msa1344310:intron 50.0%
CCTGCAGGGTTTAAAGGTGA+CGG - tig0006806:38257-38276 Msa1344310:intron 50.0%
CCTTCGGCATGTCTACAAAG+TGG + tig0006806:38620-38639 None:intergenic 50.0%
CCACTTTGTAGACATGCCGA+AGG - tig0006806:38617-38636 Msa1344310:CDS 50.0%
! CGAAGGGTTAGTACACCAAG+AGG - tig0006806:38634-38653 Msa1344310:CDS 50.0%
ATCTCAAACATCGGACCGAG+TGG + tig0006806:39016-39035 None:intergenic 50.0%
ACTGCAGTTATAGCTTCCCC+AGG + tig0006806:39717-39736 None:intergenic 50.0%
CTGCAGGTAAAACTGCCAGT+CGG - tig0006806:39862-39881 Msa1344310:intron 50.0%
TGCAGGTAAAACTGCCAGTC+GGG - tig0006806:39863-39882 Msa1344310:intron 50.0%
GGAAGGAGGAAAGTCTGCTT+GGG - tig0006806:39884-39903 Msa1344310:intron 50.0%
! AGTCTGCTTGGGCTGCATTT+TGG - tig0006806:39895-39914 Msa1344310:intron 50.0%
! GTCTGCTTGGGCTGCATTTT+GGG - tig0006806:39896-39915 Msa1344310:intron 50.0%
GGGCATATACTGTGCCATGA+TGG + tig0006806:40298-40317 None:intergenic 50.0%
CATGGCACAGTATATGCCCT+TGG - tig0006806:40299-40318 Msa1344310:CDS 50.0%
GAAACATGTCAGCCTGTTGG+CGG - tig0006806:40373-40392 Msa1344310:five_prime_UTR 50.0%
GTTGTGTGGGAAATGAGACC+TGG - tig0006806:40397-40416 Msa1344310:five_prime_UTR 50.0%
TGGGAAATGAGACCTGGTTG+TGG - tig0006806:40403-40422 Msa1344310:five_prime_UTR 50.0%
GTACAAGGTATGCCACAACC+AGG + tig0006806:40418-40437 None:intergenic 50.0%
CAGCTTGAGGGTCACTTCAC+CGG - tig0006806:34576-34595 Msa1344310:intron 55.0%
GCCATGCTACCACCGTATTG+AGG + tig0006806:34649-34668 None:intergenic 55.0%
CAATACGGTGGTAGCATGGC+TGG - tig0006806:34649-34668 Msa1344310:intron 55.0%
! GAAGGTGTGGAATGCCCAGA+AGG - tig0006806:35569-35588 Msa1344310:intron 55.0%
CAGAAGAAGCTCCAGCCTTC+TGG + tig0006806:35587-35606 None:intergenic 55.0%
AACCATGGACACACCTGAGG+AGG - tig0006806:35641-35660 Msa1344310:intron 55.0%
ATCCTCCTCAGGTGTGTCCA+TGG + tig0006806:35646-35665 None:intergenic 55.0%
ATGGACACACCTGAGGAGGA+TGG - tig0006806:35645-35664 Msa1344310:intron 55.0%
GCAGATGATCCATCCTCCTC+AGG + tig0006806:35657-35676 None:intergenic 55.0%
CCACACGATCATCTGGGTGA+GGG + tig0006806:35803-35822 None:intergenic 55.0%
TCCACACGATCATCTGGGTG+AGG + tig0006806:35804-35823 None:intergenic 55.0%
CTGGGGCACAGTATCTTCCA+TGG + tig0006806:36022-36041 None:intergenic 55.0%
! CCGGTGCTGAAATCTTGCTC+GGG + tig0006806:36047-36066 None:intergenic 55.0%
CCCGAGCAAGATTTCAGCAC+CGG - tig0006806:36044-36063 Msa1344310:intron 55.0%
CAAAAAGCCCTGGGTGTGGT+GGG - tig0006806:36136-36155 Msa1344310:intron 55.0%
ACATAGTCCCACCACACCCA+GGG + tig0006806:36146-36165 None:intergenic 55.0%
AACATAGTCCCACCACACCC+AGG + tig0006806:36147-36166 None:intergenic 55.0%
! TAGGTTGGGAAGGGATCACG+AGG - tig0006806:36514-36533 Msa1344310:intron 55.0%
GGCATTCACATACTCGCCCA+CGG + tig0006806:37035-37054 None:intergenic 55.0%
GCGAGTATGTGAATGCCCCT+TGG - tig0006806:37038-37057 Msa1344310:intron 55.0%
! GGGTTTACAGCTAGTGGACC+TGG - tig0006806:38017-38036 Msa1344310:intron 55.0%
GAGGTTGTTGGCATGAAGCC+CGG - tig0006806:38060-38079 Msa1344310:intron 55.0%
TGTTGGCATGAAGCCCGGAA+TGG - tig0006806:38065-38084 Msa1344310:intron 55.0%
GTTAGATGCGAGTGTCCTGC+AGG - tig0006806:38242-38261 Msa1344310:intron 55.0%
CCGTCACCTTTAAACCCTGC+AGG + tig0006806:38260-38279 None:intergenic 55.0%
CTCGCAAACCAAGCTTCAGC+TGG + tig0006806:39068-39087 None:intergenic 55.0%
GGTAAAACTGCCAGTCGGGA+AGG - tig0006806:39867-39886 Msa1344310:intron 55.0%
AAAACTGCCAGTCGGGAAGG+AGG - tig0006806:39870-39889 Msa1344310:intron 55.0%
AGACTTTCCTCCTTCCCGAC+TGG + tig0006806:39880-39899 None:intergenic 55.0%
GGGAAGGAGGAAAGTCTGCT+TGG - tig0006806:39883-39902 Msa1344310:intron 55.0%
!! GCTTAGTTCTGGCCGCTTCA+GGG - tig0006806:39931-39950 Msa1344310:intron 55.0%
!! CTTAGTTCTGGCCGCTTCAG+GGG - tig0006806:39932-39951 Msa1344310:intron 55.0%
GACAAGGTATGCCCCTGAAG+CGG + tig0006806:39946-39965 None:intergenic 55.0%
GTGTGGAATGCCCAGAAGGC+TGG - tig0006806:35573-35592 Msa1344310:intron 60.0%
CCCTCACCCAGATGATCGTG+TGG - tig0006806:35800-35819 Msa1344310:intron 60.0%
! CCACCACACCCAGGGCTTTT+TGG + tig0006806:36138-36157 None:intergenic 60.0%
CCAAAAAGCCCTGGGTGTGG+TGG - tig0006806:36135-36154 Msa1344310:intron 60.0%
!! GGCTTAGTTCTGGCCGCTTC+AGG - tig0006806:39930-39949 Msa1344310:intron 60.0%
AGCCTGTTGGCGGAGTTGTG+TGG - tig0006806:40383-40402 Msa1344310:five_prime_UTR 60.0%
GCCTGTTGGCGGAGTTGTGT+GGG - tig0006806:40384-40403 Msa1344310:five_prime_UTR 60.0%
TCCCACACAACTCCGCCAAC+AGG + tig0006806:40388-40407 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0006806 gene 34143 40706 34143 ID=Msa1344310;Name=Msa1344310
tig0006806 mRNA 34143 40706 34143 ID=Msa1344310-mRNA-1;Parent=Msa1344310;Name=Msa1344310-mRNA-1;_AED=0.07;_eAED=0.07;_QI=335|0.90|0.83|1|0.90|0.83|12|338|641
tig0006806 exon 34143 34579 34143 ID=Msa1344310-mRNA-1:exon:4496;Parent=Msa1344310-mRNA-1
tig0006806 exon 34866 34981 34866 ID=Msa1344310-mRNA-1:exon:4495;Parent=Msa1344310-mRNA-1
tig0006806 exon 35067 35195 35067 ID=Msa1344310-mRNA-1:exon:4494;Parent=Msa1344310-mRNA-1
tig0006806 exon 36553 36619 36553 ID=Msa1344310-mRNA-1:exon:4493;Parent=Msa1344310-mRNA-1
tig0006806 exon 36740 36822 36740 ID=Msa1344310-mRNA-1:exon:4492;Parent=Msa1344310-mRNA-1
tig0006806 exon 37744 37825 37744 ID=Msa1344310-mRNA-1:exon:4491;Parent=Msa1344310-mRNA-1
tig0006806 exon 37920 37996 37920 ID=Msa1344310-mRNA-1:exon:4490;Parent=Msa1344310-mRNA-1
tig0006806 exon 38097 38180 38097 ID=Msa1344310-mRNA-1:exon:4489;Parent=Msa1344310-mRNA-1
tig0006806 exon 38263 38332 38263 ID=Msa1344310-mRNA-1:exon:4488;Parent=Msa1344310-mRNA-1
tig0006806 exon 38433 38544 38433 ID=Msa1344310-mRNA-1:exon:4487;Parent=Msa1344310-mRNA-1
tig0006806 exon 38600 39296 38600 ID=Msa1344310-mRNA-1:exon:4486;Parent=Msa1344310-mRNA-1
tig0006806 exon 40062 40706 40062 ID=Msa1344310-mRNA-1:exon:4485;Parent=Msa1344310-mRNA-1
tig0006806 five_prime_UTR 40372 40706 40372 ID=Msa1344310-mRNA-1:five_prime_utr;Parent=Msa1344310-mRNA-1
tig0006806 CDS 40062 40371 40062 ID=Msa1344310-mRNA-1:cds;Parent=Msa1344310-mRNA-1
tig0006806 CDS 38600 39296 38600 ID=Msa1344310-mRNA-1:cds;Parent=Msa1344310-mRNA-1
tig0006806 CDS 38433 38544 38433 ID=Msa1344310-mRNA-1:cds;Parent=Msa1344310-mRNA-1
tig0006806 CDS 38263 38332 38263 ID=Msa1344310-mRNA-1:cds;Parent=Msa1344310-mRNA-1
tig0006806 CDS 38097 38180 38097 ID=Msa1344310-mRNA-1:cds;Parent=Msa1344310-mRNA-1
tig0006806 CDS 37920 37996 37920 ID=Msa1344310-mRNA-1:cds;Parent=Msa1344310-mRNA-1
tig0006806 CDS 37744 37825 37744 ID=Msa1344310-mRNA-1:cds;Parent=Msa1344310-mRNA-1
tig0006806 CDS 36740 36822 36740 ID=Msa1344310-mRNA-1:cds;Parent=Msa1344310-mRNA-1
tig0006806 CDS 36553 36619 36553 ID=Msa1344310-mRNA-1:cds;Parent=Msa1344310-mRNA-1
tig0006806 CDS 35067 35195 35067 ID=Msa1344310-mRNA-1:cds;Parent=Msa1344310-mRNA-1
tig0006806 CDS 34866 34981 34866 ID=Msa1344310-mRNA-1:cds;Parent=Msa1344310-mRNA-1
tig0006806 CDS 34481 34579 34481 ID=Msa1344310-mRNA-1:cds;Parent=Msa1344310-mRNA-1
tig0006806 three_prime_UTR 34143 34480 34143 ID=Msa1344310-mRNA-1:three_prime_utr;Parent=Msa1344310-mRNA-1
Gene Sequence

>Msa1344310

ATGAAAATTCGAAGTTCTTCTTCTATGGGTTTATTTTTAGGGTTTCTGTTACTATCGTTGACGCCTTCATCAATGGCGAAATTCGTGGTGGAGAAGAACAGCTTGAGGGTCACTTCACCGGATAGTATCAAAGGAACATACGATAGTGCGATTGGTAACTTTGGGATACCTCAATACGGTGGTAGCATGGCTGGGAACGTTGTGTATCCAAAGGATAATCAAAAGGGTTGTAAAGAGTTTGATGAGTCTGGGATTTCCTTTAAATCTAAGCCTGGTGCTCTTCCCACTATTGTTTTGCTCGATCGTGGAAGTTGCTTTTTTGCTTTGAAGGTGTGGAATGCCCAGAAGGCTGGAGCTTCTTCTGTTCTTGTTGCGGATGATATTGAAGAAAAATTAATAACCATGGACACACCTGAGGAGGATGGATCATCTGCAAAATATATAGAGAACATAACAATACCATCGGCTCTCATCGAAAAGAATTTTGGTGAAAAATTAAAGAAAGCCATAAGTGGTGGAGATATGGTTAACGTAAATCTTGATTGGAGAGAGGCTGTCCCTCACCCAGATGATCGTGTGGAGTATGAGCTGTGGACCAACAGCAATGATGAGTGTGGAGTTAAATGCGATATGTTGATGGAATTTGTGAAGGATTTTAAGGGTGCGGCACAAATATTAGAGAAAGGTGGTTATGCCCAGTTTACACCCCACTATATTACTTGGTACTGTCCTCAGGCATTCACGTTAAGTAAGCAGTGCAAGTCTCAGTGCATTAACCATGGAAGATACTGTGCCCCAGATCCCGAGCAAGATTTCAGCACCGGTTATGACGGGAAAGATGTGGTTATTGAAAATTTGAGGCAGTTATGTGTTTTCAAGGTTGCAAATGAAACCAAAAAGCCCTGGGTGTGGTGGGACTATGTTACTGATTTTCAAATTAGGTGCCCAATGAAGGAGAAAAAATACAATAAGAAATGTGCAGATGCTGTCATTGAATCACTTGGCAATTATGATTATTCAATATCTGCAGGTCTTGATATTAAAAAGATTGAAAGGTGCATGGGAGATCCAGATGCCGATTCTGAAAATTCTGTTTTGAAAGAAGAGCAAGATGCCCAGGTTGGGAAGGGATCACGAGGTGACGTTACCATATTGCCTACTCTAGTTGTCAACAGTCGACAATATCGAGGAAAATTGGAGAAAGGTGCTGTTATGAAAGCTATTTGTTCTGGTTTTGAAGAAACTACTGAACCAGCTGTTTGTTTGAGCAGTGAGGTGGAGACAAATGAATGCTTGGAGAACAACGGTGGTTGTTGGAAGGATAAAGCAGCTAACATAACTGCATGCAAGGATACTTTCCGTGGGCGAGTATGTGAATGCCCCTTGGTAGATGGTGTGCAGTTCAAAGGAGATGGTTATACGACTTGTGAAGCTAGTGGACCTGGAAGGTGTAAGATAAACAATGGAGGTTGTTGGCATGAAGCCCGGAATGGACATGCATTTTCTGCTTGTTCGGATAATGGAGGGGTTAGATGCGAGTGTCCTGCAGGGTTTAAAGGTGACGGTGTTAAAAATTGTGCAGACATTGATGAATGCAAGGAGAAGAAAGCTTGTCACTGCCCTGAATGTAGCTGCAAGAATACCTGGGGAAGCTATAACTGCAGTTGCAGTGGGGATCTTCTGTATATCAGGGACCATGATGCATGCATAAGTAAAACTGCCAGTCGGGAAGGAGGAAAGTCTGCTTGGGCTGCATTTTGGGTCATTGTAGTCGGCTTAGTTCTGGCCGCTTCAGGGGCATACCTTGTCTACAAATACAGAATTAGGTCATACATGGATTCTGAAATAAGGGCCATCATGGCACAGTATATGCCCTTGGACAGCCAATCAGAAGTTGTAAATCATGTCAACGATGAAAGAGCATGA

Protein sequence

>Msa1344310

MKIRSSSSMGLFLGFLLLSLTPSSMAKFVVEKNSLRVTSPDSIKGTYDSAIGNFGIPQYGGSMAGNVVYPKDNQKGCKEFDESGISFKSKPGALPTIVLLDRGSCFFALKVWNAQKAGASSVLVADDIEEKLITMDTPEEDGSSAKYIENITIPSALIEKNFGEKLKKAISGGDMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGYAQFTPHYITWYCPQAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVIENLRQLCVFKVANETKKPWVWWDYVTDFQIRCPMKEKKYNKKCADAVIESLGNYDYSISAGLDIKKIERCMGDPDADSENSVLKEEQDAQVGKGSRGDVTILPTLVVNSRQYRGKLEKGAVMKAICSGFEETTEPAVCLSSEVETNECLENNGGCWKDKAANITACKDTFRGRVCECPLVDGVQFKGDGYTTCEASGPGRCKINNGGCWHEARNGHAFSACSDNGGVRCECPAGFKGDGVKNCADIDECKEKKACHCPECSCKNTWGSYNCSCSGDLLYIRDHDACISKTASREGGKSAWAAFWVIVVGLVLAASGAYLVYKYRIRSYMDSEIRAIMAQYMPLDSQSEVVNHVNDERA*