AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1037510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1037510 MtrunA17_Chr7g0276201 99.165 479 4 0 1 479 1 479 0.0 973
Msa1037510 MtrunA17_Chr4g0026301 53.611 360 160 4 85 443 91 444 2.70e-140 412
Msa1037510 MtrunA17_Chr7g0266451 50.248 404 182 7 86 479 83 477 1.10e-131 389
Msa1037510 MtrunA17_Chr7g0217261 50.970 361 170 4 84 443 329 683 8.44e-125 379
Msa1037510 MtrunA17_Chr8g0372111 32.653 245 160 4 105 345 419 662 9.18e-38 147
Msa1037510 MtrunA17_Chr8g0335981 28.571 266 173 7 76 337 198 450 3.36e-32 130
Msa1037510 MtrunA17_Chr7g0250221 24.468 282 185 10 72 337 162 431 1.35e-18 89.0
Msa1037510 MtrunA17_Chr4g0068631 32.237 152 83 3 104 240 88 234 6.78e-17 83.6
Msa1037510 MtrunA17_Chr1g0153181 26.434 401 217 17 93 458 109 466 3.80e-16 81.3
Msa1037510 MtrunA17_Chr1g0153181 23.048 269 188 5 104 361 32 292 4.51e-15 77.8
Msa1037510 MtrunA17_Chr6g0465751 23.810 273 184 7 104 364 25 285 6.06e-15 77.4
Msa1037510 MtrunA17_Chr6g0466501 23.443 273 185 7 104 364 25 285 7.92e-15 77.0
Msa1037510 MtrunA17_Chr6g0466501 21.550 413 274 10 93 479 102 490 7.16e-11 64.7
Msa1037510 MtrunA17_Chr4g0044541 25.676 370 219 15 106 449 124 463 1.15e-14 76.6
Msa1037510 MtrunA17_Chr4g0044541 23.704 270 185 7 104 361 34 294 1.65e-14 76.3
Msa1037510 MtrunA17_Chr3g0133651 21.408 341 225 8 106 422 95 416 1.26e-14 75.9
Msa1037510 MtrunA17_Chr0c09g0493511 23.367 398 255 12 93 464 20 393 2.86e-14 75.1
Msa1037510 MtrunA17_Chr3g0134141 23.404 235 161 5 104 327 24 250 3.32e-14 75.1
Msa1037510 MtrunA17_Chr2g0328791 20.792 303 186 7 106 362 17 311 3.47e-14 74.3
Msa1037510 MtrunA17_Chr1g0153871 21.752 331 223 8 106 412 99 417 3.87e-14 74.3
Msa1037510 MtrunA17_Chr6g0449481 29.384 211 126 8 68 267 14 212 4.00e-14 73.9
Msa1037510 MtrunA17_Chr3g0120721 31.724 145 89 5 105 241 19 161 2.32e-13 71.2
Msa1037510 MtrunA17_Chr4g0074711 22.157 343 210 10 106 416 76 393 9.34e-13 69.7
Msa1037510 MtrunA17_Chr7g0219021 34.483 87 57 0 99 185 35 121 1.05e-12 68.2
Msa1037510 MtrunA17_Chr1g0201151 23.247 271 194 5 100 361 26 291 1.77e-12 69.7
Msa1037510 MtrunA17_Chr2g0288251 21.374 262 172 9 128 362 84 338 2.00e-12 68.9
Msa1037510 MtrunA17_Chr1g0168601 32.432 148 85 3 133 269 91 234 8.38e-12 65.1
Msa1037510 MtrunA17_Chr5g0447761 27.632 152 84 5 105 234 7 154 8.44e-12 67.0
Msa1037510 MtrunA17_Chr1g0201001 35.526 76 49 0 106 181 31 106 1.29e-11 67.0
Msa1037510 MtrunA17_Chr7g0268551 26.316 171 112 5 105 265 17 183 1.91e-11 65.9
Msa1037510 MtrunA17_Chr6g0465691 21.550 413 274 10 93 479 20 408 3.52e-11 65.5
Msa1037510 MtrunA17_Chr7g0263001 44.118 68 38 0 105 172 36 103 3.99e-11 60.8
Msa1037510 MtrunA17_Chr7g0265341 25.818 275 174 9 106 356 160 428 5.15e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1037510 AT4G00830.2 68.434 415 115 7 75 479 87 495 0.0 578
Msa1037510 AT4G00830.1 68.434 415 115 7 75 479 87 495 0.0 578
Msa1037510 AT4G00830.6 68.434 415 115 7 75 479 87 495 0.0 578
Msa1037510 AT4G00830.3 66.988 415 113 8 75 479 87 487 0.0 559
Msa1037510 AT4G00830.5 66.988 415 113 8 75 479 87 487 0.0 559
Msa1037510 AT4G00830.4 66.827 416 120 9 75 479 87 495 0.0 557
Msa1037510 AT3G52660.3 44.045 445 216 8 3 442 13 429 3.15e-118 355
Msa1037510 AT3G52660.1 44.045 445 216 8 3 442 13 429 3.15e-118 355
Msa1037510 AT3G52660.2 44.045 445 216 8 3 442 13 429 3.15e-118 355
Msa1037510 AT5G28390.1 38.889 198 62 6 247 442 1 141 7.23e-33 123
Msa1037510 AT2G44710.4 26.715 277 197 6 73 345 98 372 9.70e-28 117
Msa1037510 AT2G44710.2 26.715 277 197 6 73 345 183 457 1.23e-27 117
Msa1037510 AT2G44710.1 26.715 277 197 6 73 345 183 457 1.23e-27 117
Msa1037510 AT1G71770.1 27.719 285 170 8 106 362 148 424 1.59e-17 85.9
Msa1037510 AT1G71770.1 20.879 273 192 6 104 364 59 319 7.41e-13 71.2
Msa1037510 AT1G71770.2 27.719 285 170 8 106 362 148 424 1.59e-17 85.9
Msa1037510 AT1G71770.2 20.879 273 192 6 104 364 59 319 7.41e-13 71.2
Msa1037510 AT2G23350.1 26.410 390 225 17 106 458 136 500 4.55e-17 84.7
Msa1037510 AT2G23350.1 23.221 267 192 4 104 362 46 307 1.33e-14 77.0
Msa1037510 AT1G22760.1 27.778 288 166 10 106 362 138 414 1.24e-16 83.2
Msa1037510 AT1G49760.1 23.970 267 190 4 104 362 45 306 1.28e-16 83.2
Msa1037510 AT1G49760.1 26.075 372 214 15 106 449 135 473 8.20e-15 77.4
Msa1037510 AT1G49760.2 23.970 267 190 4 104 362 45 306 1.28e-16 83.2
Msa1037510 AT1G49760.2 26.075 372 214 15 106 449 135 473 8.20e-15 77.4
Msa1037510 AT4G34110.1 24.723 271 183 7 104 362 36 297 2.15e-16 82.4
Msa1037510 AT4G34110.1 27.907 387 202 18 106 458 126 469 1.63e-15 79.7
Msa1037510 AT5G19350.1 23.127 307 181 8 99 356 8 308 3.79e-15 77.8
Msa1037510 AT5G19350.2 22.112 303 185 7 99 356 8 304 6.91e-15 77.0
Msa1037510 AT2G36660.1 25.806 279 179 6 106 362 114 386 1.55e-14 76.6
Msa1037510 AT4G16280.3 31.973 147 86 4 105 240 121 264 5.55e-14 74.7
Msa1037510 AT4G16280.2 32.117 137 81 3 105 230 121 256 7.08e-14 74.7
Msa1037510 AT5G08695.1 27.273 253 164 7 106 340 229 479 7.68e-14 74.3
Msa1037510 AT4G16280.4 32.353 136 80 3 105 229 46 180 7.75e-14 74.3
Msa1037510 AT5G54900.1 21.767 317 193 10 105 384 61 359 1.04e-13 73.2
Msa1037510 AT3G13224.2 28.571 147 93 3 105 241 20 164 2.39e-13 71.6
Msa1037510 AT5G40490.1 28.655 171 110 5 105 267 43 209 2.86e-13 72.0
Msa1037510 AT2G33410.1 24.026 154 91 2 105 234 7 158 4.76e-13 71.2
Msa1037510 AT1G71800.1 33.051 118 67 2 106 223 11 116 5.00e-13 71.2
Msa1037510 AT3G13224.3 28.571 147 93 3 105 241 11 155 7.78e-13 70.1
Msa1037510 AT4G19610.1 24.710 259 157 8 106 337 296 543 1.96e-12 70.1
Msa1037510 AT1G60000.1 25.381 197 129 5 85 267 64 256 2.60e-12 67.4
Msa1037510 AT3G13224.1 29.252 147 92 4 105 241 20 164 2.65e-12 67.0
Msa1037510 AT3G16380.1 23.256 258 181 4 106 352 23 274 9.09e-12 67.8
Msa1037510 AT4G13850.4 39.726 73 44 0 104 176 35 107 4.93e-11 60.8
Msa1037510 AT3G23830.2 33.750 80 53 0 104 183 35 114 7.90e-11 60.5
Msa1037510 AT3G23830.1 33.750 80 53 0 104 183 35 114 7.90e-11 60.5
Msa1037510 AT4G13850.3 39.726 73 44 0 104 176 35 107 8.90e-11 60.5

Find 185 sgRNAs with CRISPR-Local

Find 456 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTTCTCTGGAAATCTTTA+TGG 0.146801 7_1:-74184938 Msa1037510:CDS
ATCACATGGTTGTGTCTTCT+TGG 0.191780 7_1:-74184429 Msa1037510:three_prime_UTR
AGTAGAAAATTGTGTTAATT+TGG 0.197651 7_1:-74184196 Msa1037510:three_prime_UTR
CATGGGTCTGAAGTCTTTAT+TGG 0.210631 7_1:-74188749 Msa1037510:CDS
GCTTCAGGGAAACGTGATTT+TGG 0.232910 7_1:-74185407 Msa1037510:CDS
TATACATAACAAGGAATTTA+AGG 0.244355 7_1:-74188459 Msa1037510:intron
ATTTACCTCCTACCACTAAT+AGG 0.263695 7_1:+74184464 None:intergenic
TCCCTTCTTCTCATCAGTTC+AGG 0.274729 7_1:+74184349 None:intergenic
GACTGGTCAGGTGAGGTCTT+TGG 0.291173 7_1:+74187950 None:intergenic
CCGGTCATTTCTACGGGGTC+GGG 0.302448 7_1:+74184557 None:intergenic
GGCTCTGTAGGGGCTGGATA+TGG 0.316133 7_1:-74184917 Msa1037510:CDS
CTCAGGTATTTGACATAAAC+AGG 0.324627 7_1:+74189081 None:intergenic
ACTGGTCAGGTGAGGTCTTT+GGG 0.328446 7_1:+74187951 None:intergenic
CCTCGATGAGGAAAATTATA+TGG 0.332236 7_1:-74189017 Msa1037510:CDS
CTCTTTCTCTCTCTCTTCAA+AGG 0.341629 7_1:-74190047 Msa1037510:five_prime_UTR
ATGCCACCTGGCAAAGCTTC+AGG 0.345103 7_1:-74185422 Msa1037510:CDS
CCAGGCGGGCGTGGAGGAGG+TGG 0.345717 7_1:-74184525 Msa1037510:CDS
GGTGGTGTAGGGGTCCTTGA+GGG 0.352000 7_1:-74184408 Msa1037510:three_prime_UTR
TGTGTCTTCTTGGTGGTGTA+GGG 0.368817 7_1:-74184419 Msa1037510:three_prime_UTR
TGGTGTAGGGGTCCTTGAGG+GGG 0.372286 7_1:-74184406 Msa1037510:three_prime_UTR
TTGTGTCTTCTTGGTGGTGT+AGG 0.376655 7_1:-74184420 Msa1037510:three_prime_UTR
GAAAATGTTAAGGTAGGATT+AGG 0.377395 7_1:-74184309 Msa1037510:three_prime_UTR
ATCGAACAGCCAATGATATA+TGG 0.379324 7_1:-74184767 Msa1037510:intron
CCCGGTCATTTCTACGGGGT+CGG 0.380279 7_1:+74184556 None:intergenic
CATTTCCCCGGTCATTTCTA+CGG 0.383712 7_1:+74184550 None:intergenic
TGAAAGCATTGATCTCATAA+AGG 0.384681 7_1:-74188200 Msa1037510:intron
GGTCCAGGCGGGCGTGGAGG+AGG 0.385930 7_1:-74184528 Msa1037510:CDS
CTTCTTTCCCGTCCTCCTCA+TGG 0.386056 7_1:-74188767 Msa1037510:CDS
TGGTGGTGTAGGGGTCCTTG+AGG 0.387491 7_1:-74184409 Msa1037510:three_prime_UTR
ATACATGTGACGACGATGTC+AGG 0.391860 7_1:-74188712 Msa1037510:CDS
CGTTTCCCTGAAGCTTTGCC+AGG 0.391885 7_1:+74185416 None:intergenic
CCAGTCTGCTGCTGCTTCAC+AGG 0.392392 7_1:-74187933 Msa1037510:intron
TCTTTATTGGCGGACTTCCT+CGG 0.402355 7_1:-74188736 Msa1037510:CDS
CCTGGTTATGGTAACTTCTC+TGG 0.403154 7_1:-74184950 Msa1037510:CDS
CCAGGATGTGGAAGATGGTT+AGG 0.404372 7_1:+74184968 None:intergenic
GGAAATGGTCCAGGCGGGCG+TGG 0.407432 7_1:-74184534 Msa1037510:CDS
TTTCTACGGGGTCGGGGACC+TGG 0.410876 7_1:+74184564 None:intergenic
CATCTTCCACATCCTGGTTA+TGG 0.411894 7_1:-74184962 Msa1037510:CDS
TGCTGCTGCTGCTTATCAAC+AGG 0.412652 7_1:-74184888 Msa1037510:intron
GGAAATCTTTATGGCTCTGT+AGG 0.414546 7_1:-74184929 Msa1037510:CDS
CCACCTCCTCCACGCCCGCC+TGG 0.417952 7_1:+74184525 None:intergenic
TTCTTTCCCGTCCTCCTCAT+GGG 0.418722 7_1:-74188766 Msa1037510:CDS
CGTAGAAATGACCGGGGAAA+TGG 0.418861 7_1:-74184549 Msa1037510:CDS
GGTGTAGGGGTCCTTGAGGG+GGG 0.421376 7_1:-74184405 Msa1037510:three_prime_UTR
ACCAAACACAGGTTATTCAT+TGG 0.421589 7_1:-74188289 Msa1037510:CDS
CATGGACAGAGGATGAGTTT+AGG 0.422354 7_1:-74188252 Msa1037510:CDS
CTTTATTGGCGGACTTCCTC+GGG 0.429131 7_1:-74188735 Msa1037510:CDS
TTAATCAAAGACAGGGAGAC+TGG 0.429314 7_1:-74188548 Msa1037510:CDS
ATCTGCATTCCTGCTGGCAT+TGG 0.429710 7_1:+74184737 None:intergenic
GGCGGGCGTGGAGGAGGTGG+TGG 0.432818 7_1:-74184522 Msa1037510:CDS
CATCAGTTCAGGATTGAGAA+AGG 0.438101 7_1:+74184360 None:intergenic
GGAGGTTATGCGTACAATCC+TGG 0.438826 7_1:-74184998 Msa1037510:CDS
CAGTCAACAGCCTGGTGTAC+AGG 0.439586 7_1:-74184589 Msa1037510:CDS
ATTTCCCCGGTCATTTCTAC+GGG 0.439635 7_1:+74184551 None:intergenic
AATGGTCCAGGCGGGCGTGG+AGG 0.440125 7_1:-74184531 Msa1037510:CDS
CTTGTTATGTATATCATCAA+TGG 0.440341 7_1:+74188469 None:intergenic
GTGGTGTAGGGGTCCTTGAG+GGG 0.442584 7_1:-74184407 Msa1037510:three_prime_UTR
ATCCTGAACTGATGAGAAGA+AGG 0.444453 7_1:-74184351 Msa1037510:three_prime_UTR
TTTACCTCCTACCACTAATA+GGG 0.450615 7_1:+74184465 None:intergenic
TCTTTCTCTCTCTCTTCAAA+GGG 0.451006 7_1:-74190046 Msa1037510:five_prime_UTR
TCCTCTTCATCAATGAGAGC+TGG 0.454460 7_1:+74188809 None:intergenic
ACCAATGAATAACCTGTGTT+TGG 0.455471 7_1:+74188288 None:intergenic
TGTTCAGTAGTAACATTCTC+AGG 0.458986 7_1:+74185491 None:intergenic
GAAGATATCGACCCTATTAG+TGG 0.463195 7_1:-74184476 Msa1037510:exon
AGATTTGCTTGTGTTGTGTT+CGG 0.464946 7_1:+74189983 None:intergenic
GCCGTTGAGGGTGTTGGTCC+CGG 0.465967 7_1:-74188226 Msa1037510:CDS
GCCCGCCTGGACCATTTCCC+CGG 0.468739 7_1:+74184538 None:intergenic
ACATAGCCAATTCGACCATC+TGG 0.472814 7_1:+74184698 None:intergenic
TGCCACCTGGCAAAGCTTCA+GGG 0.476094 7_1:-74185421 Msa1037510:CDS
GAAATCTTTATGGCTCTGTA+GGG 0.476396 7_1:-74184928 Msa1037510:CDS
AGATTAAATTAATCAAAGAC+AGG 0.481330 7_1:-74188556 Msa1037510:CDS
GAGATCAATGCTTTCAACTC+CGG 0.481985 7_1:+74188207 None:intergenic
CGACCATCTGGTAAAACCAT+TGG 0.482813 7_1:+74184710 None:intergenic
GGAGGTGGTGGTAATGATGA+TGG 0.484593 7_1:-74184510 Msa1037510:CDS
TCTGCACCTTCTGACATGAT+TGG 0.485195 7_1:+74189058 None:intergenic
AGGAGCTATTTCGTCGTCAT+GGG 0.490593 7_1:-74185463 Msa1037510:CDS
AGTTGTTATTGCGAAGCCTC+AGG 0.490927 7_1:-74185038 Msa1037510:CDS
AAAATGTGAAGAAAATGTTA+AGG 0.492398 7_1:-74184319 Msa1037510:three_prime_UTR
GAAGCAGCAGCAGACTGGTC+AGG 0.493493 7_1:+74187938 None:intergenic
CTTTATGGCTCTGTAGGGGC+TGG 0.493827 7_1:-74184923 Msa1037510:CDS
AAGGAGCTATTTCGTCGTCA+TGG 0.495504 7_1:-74185464 Msa1037510:CDS
CGGTCATTTCTACGGGGTCG+GGG 0.495783 7_1:+74184558 None:intergenic
CAATAACAACTTCAAGAGCT+TGG 0.499467 7_1:+74185050 None:intergenic
AGGAAAGCCGTTGAGGGTGT+TGG 0.501756 7_1:-74188232 Msa1037510:CDS
GGAAAATTATATGGAAGAGA+TGG 0.503412 7_1:-74189008 Msa1037510:CDS
AACAAAGGAGGTGGCACAGA+AGG 0.503949 7_1:-74188492 Msa1037510:CDS
AAGCAAGGGTTATGCTTTCG+TGG 0.504463 7_1:-74188522 Msa1037510:CDS
GAGGAGACAGCAGCAGAGGC+TGG 0.509710 7_1:-74188896 Msa1037510:CDS
TGTTACTACTGAACAACTAA+AGG 0.511831 7_1:-74185483 Msa1037510:CDS
GGGTCTGAAGTCTTTATTGG+CGG 0.513723 7_1:-74188746 Msa1037510:CDS
ACCAGCTCTCATTGATGAAG+AGG 0.515995 7_1:-74188810 Msa1037510:CDS
CAGGGAATTGTGTGAGCCCA+TGG 0.518448 7_1:-74188693 Msa1037510:CDS
CCTTCTGACATGATTGGCTC+AGG 0.518642 7_1:+74189064 None:intergenic
GGAACCATCTGCATTCCTGC+TGG 0.518900 7_1:+74184731 None:intergenic
TGTGAAGAAAATGTTAAGGT+AGG 0.519298 7_1:-74184315 Msa1037510:three_prime_UTR
AGATCAATGCTTTCAACTCC+GGG 0.521590 7_1:+74188208 None:intergenic
GGACCCCTACCATATATCAT+TGG 0.523074 7_1:+74184758 None:intergenic
TCTGACCAAAACACAAAATG+AGG 0.523169 7_1:+74190103 None:intergenic
CAGCCTGGTGTACAGGTGCC+AGG 0.525138 7_1:-74184582 Msa1037510:CDS
TTCAGACCCATGAGGAGGAC+GGG 0.525429 7_1:+74188760 None:intergenic
CCAGAGAAGTTACCATAACC+AGG 0.530505 7_1:+74184950 None:intergenic
ACAAAAGTGGTCATGCCACC+TGG 0.531745 7_1:-74185434 Msa1037510:CDS
AGCAAGGGTTATGCTTTCGT+GGG 0.535584 7_1:-74188521 Msa1037510:CDS
ACATGGTTGTGTCTTCTTGG+TGG 0.535839 7_1:-74184426 Msa1037510:three_prime_UTR
CATAACCAGGATGTGGAAGA+TGG 0.536285 7_1:+74184963 None:intergenic
CCCGACCCCGTAGAAATGAC+CGG 0.536467 7_1:-74184557 Msa1037510:CDS
CAGGGAGACTGGAGAAAGCA+AGG 0.536934 7_1:-74188537 Msa1037510:CDS
CCTGTGAAGCAGCAGCAGAC+TGG 0.538416 7_1:+74187933 None:intergenic
AATAGAAATATCACTGGTCC+TGG 0.539313 7_1:+74184285 None:intergenic
CCTAACCATCTTCCACATCC+TGG 0.539820 7_1:-74184968 Msa1037510:CDS
GTGTCTTCTTGGTGGTGTAG+GGG 0.541281 7_1:-74184418 Msa1037510:three_prime_UTR
CCGACCCCGTAGAAATGACC+GGG 0.542279 7_1:-74184556 Msa1037510:CDS
GCTCATCTTCTTCAGCGCCA+TGG 0.544023 7_1:+74188837 None:intergenic
GACCTCAACAATATCACCCA+TGG 0.547750 7_1:+74188676 None:intergenic
TGTTGAAGAACACGAATATG+AGG 0.551736 7_1:-74188915 Msa1037510:CDS
ATAGATGACGATGGAGTGGA+TGG 0.552315 7_1:-74188965 Msa1037510:CDS
GAGTTTAGGAAAGCCGTTGA+GGG 0.552705 7_1:-74188238 Msa1037510:CDS
TTGTACGCATAACCTCCATC+AGG 0.553819 7_1:+74185004 None:intergenic
AATGACCGGGGAAATGGTCC+AGG 0.555766 7_1:-74184543 Msa1037510:CDS
ACCGGGGAAATGGTCCAGGC+GGG 0.557494 7_1:-74184539 Msa1037510:CDS
AAGTTACCATAACCAGGATG+TGG 0.557504 7_1:+74184956 None:intergenic
ACGGAGAAATATGAAATTGA+CGG 0.559927 7_1:-74185335 Msa1037510:intron
GGTAGGGGTCCAATGCCAGC+AGG 0.561717 7_1:-74184746 Msa1037510:CDS
GGACCTGGCACCTGTACACC+AGG 0.562206 7_1:+74184579 None:intergenic
ATGTTCTGCAGTCAACAGCC+TGG 0.562438 7_1:-74184597 Msa1037510:intron
CATTGATGATATACATAACA+AGG 0.565385 7_1:-74188468 Msa1037510:CDS
AAATGATCGGTGAAGATGCA+AGG 0.567751 7_1:-74190162 None:intergenic
ATGCAAGGGTGCAAGTGAGA+AGG 0.569372 7_1:-74190147 Msa1037510:five_prime_UTR
ACAGCCAATGATATATGGTA+GGG 0.572896 7_1:-74184762 Msa1037510:intron
GATGTGGAAGATGGTTAGGA+TGG 0.573494 7_1:+74184972 None:intergenic
AGGAATGCAGATGGTTCCAA+TGG 0.574457 7_1:-74184726 Msa1037510:CDS
CTTCAGACCCATGAGGAGGA+CGG 0.579525 7_1:+74188759 None:intergenic
AGCAGCAGACTGGTCAGGTG+AGG 0.583616 7_1:+74187943 None:intergenic
TAACTTAATAGAAATATCAC+TGG 0.588772 7_1:+74184279 None:intergenic
AGATGGTTAGGATGGAGTCC+AGG 0.592860 7_1:+74184980 None:intergenic
GTATCACACCGACTGTCACA+TGG 0.596946 7_1:-74187979 Msa1037510:CDS
TCCTGAACTGATGAGAAGAA+GGG 0.597276 7_1:-74184350 Msa1037510:three_prime_UTR
GGGTTATAAAACAAAGGAGG+TGG 0.597805 7_1:-74188501 Msa1037510:CDS
TCCGGGACCAACACCCTCAA+CGG 0.598148 7_1:+74188225 None:intergenic
TTCCCTGAAGCTTTGCCAGG+TGG 0.598628 7_1:+74185419 None:intergenic
CAAAATCAAAGCAGAAATCG+TGG 0.602168 7_1:-74188085 Msa1037510:CDS
TTTCGTGGGTTATAAAACAA+AGG 0.603686 7_1:-74188507 Msa1037510:CDS
AGTGTGGGTTTCAAGCTAGA+TGG 0.603926 7_1:-74188001 Msa1037510:CDS
GGGTCAGCCCATGTGACAGT+CGG 0.604999 7_1:+74187971 None:intergenic
ACCTCAACAATATCACCCAT+GGG 0.606317 7_1:+74188677 None:intergenic
CGACAAAAGATGTCAAGTGT+GGG 0.606384 7_1:-74188016 Msa1037510:CDS
AACAGCCAATGATATATGGT+AGG 0.606566 7_1:-74184763 Msa1037510:intron
TACATGTGACGACGATGTCA+GGG 0.615488 7_1:-74188711 Msa1037510:CDS
AAATCTTTATGGCTCTGTAG+GGG 0.616942 7_1:-74184927 Msa1037510:CDS
ACGACAAAAGATGTCAAGTG+TGG 0.618953 7_1:-74188017 Msa1037510:CDS
ATATCGACCCTATTAGTGGT+AGG 0.620077 7_1:-74184472 Msa1037510:exon
TCATGGGGAAGTAACAAAAG+TGG 0.622137 7_1:-74185447 Msa1037510:CDS
ACAGATAGATGACGATGGAG+TGG 0.623025 7_1:-74188969 Msa1037510:CDS
GTTTCATTCATTATGCTGAG+AGG 0.624418 7_1:-74185385 Msa1037510:CDS
AGGGAGACTGGAGAAAGCAA+GGG 0.624475 7_1:-74188536 Msa1037510:CDS
CGTGGGTTATAAAACAAAGG+AGG 0.624765 7_1:-74188504 Msa1037510:CDS
CCTGAGCCAATCATGTCAGA+AGG 0.625578 7_1:-74189064 Msa1037510:exon
ATATGAGGAGACAGCAGCAG+AGG 0.629414 7_1:-74188900 Msa1037510:CDS
GATTAAATTAATCAAAGACA+GGG 0.629935 7_1:-74188555 Msa1037510:CDS
TCGACCCTATTAGTGGTAGG+AGG 0.638674 7_1:-74184469 Msa1037510:exon
GATGACGATGGAGTGGATGG+AGG 0.642481 7_1:-74188962 Msa1037510:CDS
TGAGTTTAGGAAAGCCGTTG+AGG 0.642754 7_1:-74188239 Msa1037510:CDS
ATTGAAAGCTGTAAAAGAGA+CGG 0.643889 7_1:-74185354 Msa1037510:CDS
CAGCCAATGATATATGGTAG+GGG 0.646366 7_1:-74184761 Msa1037510:CDS
AATGCCAGCAGGAATGCAGA+TGG 0.647935 7_1:-74184735 Msa1037510:CDS
GCCCATGGGTGATATTGTTG+AGG 0.648762 7_1:-74188678 Msa1037510:intron
GACCGGGGAAATGGTCCAGG+CGG 0.648958 7_1:-74184540 Msa1037510:CDS
AAAATCAAAGCAGAAATCGT+GGG 0.650895 7_1:-74188084 Msa1037510:CDS
AGAGATGGACGATGATGTTG+AGG 0.652385 7_1:-74188993 Msa1037510:CDS
AATGATCGGTGAAGATGCAA+GGG 0.653096 7_1:-74190161 None:intergenic
GGCGAAGATGAAAATGCTGA+AGG 0.655624 7_1:-74188941 Msa1037510:CDS
AGGGAATTGTGTGAGCCCAT+GGG 0.660365 7_1:-74188692 Msa1037510:CDS
ATGCATTGTGGCTCATCACA+TGG 0.661262 7_1:-74184443 Msa1037510:three_prime_UTR
CTGACCAAAACACAAAATGA+GGG 0.661882 7_1:+74190104 None:intergenic
GGAGCTATTTCGTCGTCATG+GGG 0.670970 7_1:-74185462 Msa1037510:CDS
GGTAGGAGGTAAATGCATTG+TGG 0.675843 7_1:-74184455 Msa1037510:three_prime_UTR
TGCTGTCTGAAACCAAACAC+AGG 0.677613 7_1:-74188300 Msa1037510:CDS
TATCACACCGACTGTCACAT+GGG 0.679483 7_1:-74187978 Msa1037510:CDS
TCGTCGTCACATGTATCCCG+AGG 0.686914 7_1:+74188719 None:intergenic
GTTAAGGTAGGATTAGGACC+AGG 0.694530 7_1:-74184303 Msa1037510:three_prime_UTR
AAGACTTCAGACCCATGAGG+AGG 0.707032 7_1:+74188755 None:intergenic
TGAGCGTGTTGACCTCGATG+AGG 0.709115 7_1:-74189029 Msa1037510:CDS
GAGGAACAGATAGATGACGA+TGG 0.727620 7_1:-74188974 Msa1037510:CDS
TTTCCCCGGTCATTTCTACG+GGG 0.740148 7_1:+74184552 None:intergenic
ATAAAGACTTCAGACCCATG+AGG 0.754876 7_1:+74188752 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAT+TGG + chr7_1:74187001-74187020 None:intergenic 0.0%
!! AAAACATATATATACATATA+TGG + chr7_1:74185052-74185071 None:intergenic 10.0%
!!! TTATATCAATAATCTTATTT+TGG - chr7_1:74185801-74185820 Msa1037510:intron 10.0%
!! TTAAACAATTTAATATAAAC+TGG + chr7_1:74186033-74186052 None:intergenic 10.0%
!! TTTATTTATTAGTACAAAAA+GGG + chr7_1:74186803-74186822 None:intergenic 10.0%
!! ATTTATTTATTAGTACAAAA+AGG + chr7_1:74186804-74186823 None:intergenic 10.0%
!! GTACTAATAAATAAATAAAT+AGG - chr7_1:74186808-74186827 Msa1037510:intron 10.0%
!! AATATTAAAATTATTGTCAA+GGG + chr7_1:74187726-74187745 None:intergenic 10.0%
!! AATATTAAAATTATTGTCAA+GGG + chr7_1:74187726-74187745 None:intergenic 10.0%
!! GTATTATATCAAATAAAATA+AGG + chr7_1:74189548-74189567 None:intergenic 10.0%
!! AAAGTTATTCAATAAGATTT+AGG + chr7_1:74184849-74184868 None:intergenic 15.0%
!!! AACAATCTTTTCTTATATTT+TGG - chr7_1:74184925-74184944 Msa1037510:CDS 15.0%
!! CATATAATCATCAAATTTAT+GGG - chr7_1:74186673-74186692 Msa1037510:intron 15.0%
!!! CTCATTTTATATTTATGTAT+GGG - chr7_1:74187047-74187066 Msa1037510:intron 15.0%
!!! ATGATATAATTTTGTTTCTT+TGG - chr7_1:74187564-74187583 Msa1037510:intron 15.0%
!! GAATATTAAAATTATTGTCA+AGG + chr7_1:74187727-74187746 None:intergenic 15.0%
!! GAATATTAAAATTATTGTCA+AGG + chr7_1:74187727-74187746 None:intergenic 15.0%
!! AAATATAATAATCAATGAGA+AGG + chr7_1:74188190-74188209 None:intergenic 15.0%
!!! TTTTTGTTTTTGTTATTTTC+AGG - chr7_1:74188643-74188662 Msa1037510:intron 15.0%
!!! TTCATTGTTTTTACTAAATA+TGG - chr7_1:74189087-74189106 Msa1037510:five_prime_UTR 15.0%
!!! TTTGATTTGATTTGATTTGA+TGG + chr7_1:74184336-74184355 None:intergenic 20.0%
!! ATTGAATAACTTTATGTATC+TGG - chr7_1:74184856-74184875 Msa1037510:intron 20.0%
!!! TAAGAAAAGATTGTTTTTGT+AGG + chr7_1:74184920-74184939 None:intergenic 20.0%
!! AGATTAAATTAATCAAAGAC+AGG - chr7_1:74185627-74185646 Msa1037510:intron 20.0%
!! GATTAAATTAATCAAAGACA+GGG - chr7_1:74185628-74185647 Msa1037510:intron 20.0%
!! TATACATAACAAGGAATTTA+AGG - chr7_1:74185724-74185743 Msa1037510:intron 20.0%
!! CTTATTCATGATAATTACAT+TGG - chr7_1:74185770-74185789 Msa1037510:intron 20.0%
!!! TTTTGGTGATTACTTTTAAT+CGG - chr7_1:74185818-74185837 Msa1037510:intron 20.0%
!!! TTAACATTTTTCATGATATC+AGG - chr7_1:74185842-74185861 Msa1037510:intron 20.0%
!!! TAACATTTTTCATGATATCA+GGG - chr7_1:74185843-74185862 Msa1037510:intron 20.0%
!! AACAATTTAATATAAACTGG+TGG + chr7_1:74186030-74186049 None:intergenic 20.0%
!! GATATTTATTATTGTGACTT+AGG - chr7_1:74186519-74186538 Msa1037510:intron 20.0%
!! AATATGTAGATAAAAATCAG+AGG + chr7_1:74186552-74186571 None:intergenic 20.0%
!! GCATATAATCATCAAATTTA+TGG - chr7_1:74186672-74186691 Msa1037510:intron 20.0%
!! AATAAATAAATAGGGAATTC+TGG - chr7_1:74186817-74186836 Msa1037510:intron 20.0%
!! GATAATCTAACATTAGAAAA+AGG - chr7_1:74186858-74186877 Msa1037510:intron 20.0%
!! CCATACATAAATATAAAATG+AGG + chr7_1:74187049-74187068 None:intergenic 20.0%
!!! CCTCATTTTATATTTATGTA+TGG - chr7_1:74187046-74187065 Msa1037510:intron 20.0%
!!! ATATAATTTTGTTTCTTTGG+TGG - chr7_1:74187567-74187586 Msa1037510:intron 20.0%
!!! TCTCCTTTTTTTATTTTTTG+AGG - chr7_1:74187678-74187697 Msa1037510:intron 20.0%
!!! CTCCTTTTTTTATTTTTTGA+GGG - chr7_1:74187679-74187698 Msa1037510:intron 20.0%
!! TTCCCTCAAAAAATAAAAAA+AGG + chr7_1:74187684-74187703 None:intergenic 20.0%
!! GAAATTAGAAATATTATTGG+TGG + chr7_1:74187749-74187768 None:intergenic 20.0%
!! TGGGAAATTAGAAATATTAT+TGG + chr7_1:74187752-74187771 None:intergenic 20.0%
!! GAAATTAGAAATATTATTGG+TGG + chr7_1:74187749-74187768 None:intergenic 20.0%
!! GTGGAAATTAGAAATATTAT+TGG + chr7_1:74188004-74188023 None:intergenic 20.0%
!! ATTTAATATTGACAATCTGA+AGG + chr7_1:74188123-74188142 None:intergenic 20.0%
!! ACTAGTAAATTGCAATAATT+GGG - chr7_1:74188451-74188470 Msa1037510:intron 20.0%
!!! TTCGTATTTTACATGTTTTT+GGG - chr7_1:74188573-74188592 Msa1037510:intron 20.0%
!! AGTGATGAAAAATAACAATA+TGG - chr7_1:74188978-74188997 Msa1037510:CDS 20.0%
!! AAAATGTGAAGAAAATGTTA+AGG - chr7_1:74189864-74189883 Msa1037510:intron 20.0%
!! TAACTTAATAGAAATATCAC+TGG + chr7_1:74189907-74189926 None:intergenic 20.0%
!!! AAATTAACACAATTTTCTAC+TGG + chr7_1:74189988-74190007 None:intergenic 20.0%
!! AGTAGAAAATTGTGTTAATT+TGG - chr7_1:74189987-74190006 Msa1037510:five_prime_UTR 20.0%
! CGAAGAAATGAGATAAAAAA+GGG + chr7_1:74184387-74184406 None:intergenic 25.0%
!!! CCTTTTTTATCTCATTTCTT+CGG - chr7_1:74184385-74184404 Msa1037510:three_prime_UTR 25.0%
!!! CTTTTTTATCTCATTTCTTC+GGG - chr7_1:74184386-74184405 Msa1037510:three_prime_UTR 25.0%
!!! TTTTTTATCTCATTTCTTCG+GGG - chr7_1:74184387-74184406 Msa1037510:three_prime_UTR 25.0%
! ATAGTTAGACTTAGAAGAAT+TGG + chr7_1:74184444-74184463 None:intergenic 25.0%
! CCAAAAAAGATAGAAGAAAT+TGG + chr7_1:74184516-74184535 None:intergenic 25.0%
!!! CCAATTTCTTCTATCTTTTT+TGG - chr7_1:74184513-74184532 Msa1037510:CDS 25.0%
!!! TTCTTCTATCTTTTTTGGTA+TGG - chr7_1:74184518-74184537 Msa1037510:CDS 25.0%
!! TTTTATAGATTTCCATCACA+TGG - chr7_1:74184593-74184612 Msa1037510:intron 25.0%
! AGAAAGGTTCATTTAAACAA+CGG + chr7_1:74184625-74184644 None:intergenic 25.0%
!!! TAGTTAGGGTATTTCATTTT+AGG - chr7_1:74184651-74184670 Msa1037510:intron 25.0%
!!! AGTTAGGGTATTTCATTTTA+GGG - chr7_1:74184652-74184671 Msa1037510:intron 25.0%
!!! TCATTTTAGGGTTTTACTTA+TGG - chr7_1:74184664-74184683 Msa1037510:intron 25.0%
!! AGTTAGCGAATTTTAAACAA+CGG + chr7_1:74184722-74184741 None:intergenic 25.0%
! AAAGGTTGAGAAATAGATAA+CGG + chr7_1:74184764-74184783 None:intergenic 25.0%
! CAAAATATAGTGAAATTACC+CGG + chr7_1:74184813-74184832 None:intergenic 25.0%
!!! TCTTTTCTTATATTTTGGAC+CGG - chr7_1:74184930-74184949 Msa1037510:CDS 25.0%
! GAATCTGTATTGTTAAATAG+CGG + chr7_1:74185030-74185049 None:intergenic 25.0%
!! CTTGTTATGTATATCATCAA+TGG + chr7_1:74185717-74185736 None:intergenic 25.0%
!! CATTGATGATATACATAACA+AGG - chr7_1:74185715-74185734 Msa1037510:intron 25.0%
!! TGAATAAGATTTTCAGAAAG+CGG + chr7_1:74185758-74185777 None:intergenic 25.0%
! CTATAACAGACAAAAATGTT+TGG + chr7_1:74186072-74186091 None:intergenic 25.0%
!! CAAACATTTTTGTCTGTTAT+AGG - chr7_1:74186070-74186089 Msa1037510:intron 25.0%
! ATGTTTGATTGAGCATTTAT+AGG - chr7_1:74186350-74186369 Msa1037510:intron 25.0%
!!! TATGGGTTTTAGATATAAGA+TGG - chr7_1:74186690-74186709 Msa1037510:intron 25.0%
!! TTTTCCATAAAAATGATGAG+AGG - chr7_1:74187307-74187326 Msa1037510:intron 25.0%
! TTTCCATAAAAATGATGAGA+GGG - chr7_1:74187308-74187327 Msa1037510:intron 25.0%
! CAAAAATCGTAAATCAGATT+CGG + chr7_1:74187342-74187361 None:intergenic 25.0%
! ATAGAAAAATTGAGAATCGT+GGG + chr7_1:74187615-74187634 None:intergenic 25.0%
! AATAGAAAAATTGAGAATCG+TGG + chr7_1:74187616-74187635 None:intergenic 25.0%
! AATTATTGTCAAGGGAATAA+AGG + chr7_1:74187718-74187737 None:intergenic 25.0%
! TATAGAAAAATTGTGAATCG+CGG + chr7_1:74187803-74187822 None:intergenic 25.0%
! ACCTTAAACTAGGAATAATT+GGG + chr7_1:74187899-74187918 None:intergenic 25.0%
! AACCTTAAACTAGGAATAAT+TGG + chr7_1:74187900-74187919 None:intergenic 25.0%
! AAATGAAAGAACCTTAAACT+AGG + chr7_1:74187909-74187928 None:intergenic 25.0%
! AATTATTGTCAAGGGAATAA+AGG + chr7_1:74187718-74187737 None:intergenic 25.0%
! ATCATTAAGTCAAAAGTGAA+TGG + chr7_1:74188060-74188079 None:intergenic 25.0%
! AAAATTCATTGAACAGGTAA+AGG + chr7_1:74188374-74188393 None:intergenic 25.0%
! GAAACTAAAATTCATTGAAC+AGG + chr7_1:74188380-74188399 None:intergenic 25.0%
! GACTAGTAAATTGCAATAAT+TGG - chr7_1:74188450-74188469 Msa1037510:intron 25.0%
! CATAGAATGTGAATTTAATG+AGG - chr7_1:74188548-74188567 Msa1037510:CDS 25.0%
!! GTTCGTATTTTACATGTTTT+TGG - chr7_1:74188572-74188591 Msa1037510:intron 25.0%
!!! TCGTATTTTACATGTTTTTG+GGG - chr7_1:74188574-74188593 Msa1037510:intron 25.0%
!!! TTATTTTTCATCACTCAAAC+AGG + chr7_1:74188973-74188992 None:intergenic 25.0%
! AACAATGAATATATTCGAAG+AGG + chr7_1:74189076-74189095 None:intergenic 25.0%
!! GTGTTTTTGTGAATTGAGAA+GGG + chr7_1:74184231-74184250 None:intergenic 30.0%
!! AGTGTTTTTGTGAATTGAGA+AGG + chr7_1:74184232-74184251 None:intergenic 30.0%
TTCTCAATTCACAAAAACAC+TGG - chr7_1:74184231-74184250 Msa1037510:three_prime_UTR 30.0%
CCGAAGAAATGAGATAAAAA+AGG + chr7_1:74184388-74184407 None:intergenic 30.0%
! TTTTTATCTCATTTCTTCGG+GGG - chr7_1:74184388-74184407 Msa1037510:three_prime_UTR 30.0%
! CTGAAAAGTGTGAATGAATA+CGG + chr7_1:74184567-74184586 None:intergenic 30.0%
GAAAGGTTCATTTAAACAAC+GGG + chr7_1:74184624-74184643 None:intergenic 30.0%
! AACCTTTCTTCTAGTTAGTT+AGG - chr7_1:74184636-74184655 Msa1037510:intron 30.0%
! ACCTTTCTTCTAGTTAGTTA+GGG - chr7_1:74184637-74184656 Msa1037510:intron 30.0%
!! TTTAGGGTTTTACTTATGGA+TGG - chr7_1:74184668-74184687 Msa1037510:intron 30.0%
! GTTAGCGAATTTTAAACAAC+GGG + chr7_1:74184721-74184740 None:intergenic 30.0%
GGAAAATTATATGGAAGAGA+TGG - chr7_1:74185175-74185194 Msa1037510:intron 30.0%
! AAACTTTTCATTTCAGCGTA+GGG - chr7_1:74185560-74185579 Msa1037510:intron 30.0%
GTTGGGATTATTAACAAGTT+TGG - chr7_1:74185588-74185607 Msa1037510:intron 30.0%
! TTTCGTGGGTTATAAAACAA+AGG - chr7_1:74185676-74185695 Msa1037510:intron 30.0%
! TTGGTAACATTCCAAAAACA+TGG - chr7_1:74185913-74185932 Msa1037510:intron 30.0%
!! TGAAAGCATTGATCTCATAA+AGG - chr7_1:74185983-74186002 Msa1037510:intron 30.0%
CATTGATCTCATAAAGGTTT+GGG - chr7_1:74185989-74186008 Msa1037510:intron 30.0%
!! GATTTCTGCTTTGATTTTGA+GGG + chr7_1:74186097-74186116 None:intergenic 30.0%
AAAATCAAAGCAGAAATCGT+GGG - chr7_1:74186099-74186118 Msa1037510:intron 30.0%
TCAAACATTTGATGCAATGT+AGG + chr7_1:74186338-74186357 None:intergenic 30.0%
GAAAAAAGAAGAAAAAGAGC+AGG + chr7_1:74186395-74186414 None:intergenic 30.0%
TTGCAAATACCAATCAGTTT+AGG + chr7_1:74186434-74186453 None:intergenic 30.0%
AAATATCTCAAGCAGAAAAC+AGG + chr7_1:74186506-74186525 None:intergenic 30.0%
AGTCGTCAATTTGAGTAAAT+CGG - chr7_1:74186574-74186593 Msa1037510:intron 30.0%
ATTTGAGTAAATCGGAGATA+AGG - chr7_1:74186582-74186601 Msa1037510:intron 30.0%
! TAATGGATGAAAACTTGAAG+TGG - chr7_1:74186930-74186949 Msa1037510:intron 30.0%
AATGGATGAAAACTTGAAGT+GGG - chr7_1:74186931-74186950 Msa1037510:intron 30.0%
! CGAATCTGATTTACGATTTT+TGG - chr7_1:74187340-74187359 Msa1037510:intron 30.0%
AAGGAGAAAGAAATCTGATT+AGG + chr7_1:74187665-74187684 None:intergenic 30.0%
AACACGGATCGTAATATTAT+TGG + chr7_1:74187775-74187794 None:intergenic 30.0%
ATAGAAAAATTGTGAATCGC+GGG + chr7_1:74187802-74187821 None:intergenic 30.0%
AAGGAGAAAGAAATCTGATT+AGG + chr7_1:74187665-74187684 None:intergenic 30.0%
AATGAATTGACATTAGCACA+TGG + chr7_1:74188099-74188118 None:intergenic 30.0%
AGAACAGGCAAAAAACAAAA+GGG + chr7_1:74188167-74188186 None:intergenic 30.0%
TATTTCCTTGTTAACTGATG+CGG - chr7_1:74188205-74188224 Msa1037510:CDS 30.0%
ATGCTTTCAAATTTCAGCAT+GGG + chr7_1:74188528-74188547 None:intergenic 30.0%
TGTTACTACTGAACAACTAA+AGG - chr7_1:74188700-74188719 Msa1037510:CDS 30.0%
ATTGAAAGCTGTAAAAGAGA+CGG - chr7_1:74188829-74188848 Msa1037510:CDS 30.0%
ACGGAGAAATATGAAATTGA+CGG - chr7_1:74188848-74188867 Msa1037510:CDS 30.0%
AAAAAACAGACAAACTTGCA+GGG + chr7_1:74188912-74188931 None:intergenic 30.0%
!!! TCTGTTTTTTCTTTCTTCGA+CGG - chr7_1:74188922-74188941 Msa1037510:CDS 30.0%
! TTTTTATGTCTTTGAACTGC+AGG - chr7_1:74189110-74189129 Msa1037510:intron 30.0%
! AACTTCTCTGGAAATCTTTA+TGG - chr7_1:74189245-74189264 Msa1037510:intron 30.0%
TCTAATATGTTTGCATCTTG+TGG - chr7_1:74189380-74189399 Msa1037510:intron 30.0%
CTAATATGTTTGCATCTTGT+GGG - chr7_1:74189381-74189400 Msa1037510:intron 30.0%
!! CATGAGTTTTAACAACTTAC+AGG + chr7_1:74189511-74189530 None:intergenic 30.0%
GTTGTTAAAACTCATGTACA+TGG - chr7_1:74189515-74189534 Msa1037510:intron 30.0%
TGTGAAGAAAATGTTAAGGT+AGG - chr7_1:74189868-74189887 Msa1037510:intron 30.0%
GAAAATGTTAAGGTAGGATT+AGG - chr7_1:74189874-74189893 Msa1037510:intron 30.0%
CATTACAAGCAGAAAAAGTT+GGG + chr7_1:74189944-74189963 None:intergenic 30.0%
AAAAATGAGCGACAAAAACA+TGG + chr7_1:74190027-74190046 None:intergenic 30.0%
CTGACCAAAACACAAAATGA+GGG + chr7_1:74184082-74184101 None:intergenic 35.0%
TCTGACCAAAACACAAAATG+AGG + chr7_1:74184083-74184102 None:intergenic 35.0%
TCTTTCTCTCTCTCTTCAAA+GGG - chr7_1:74184137-74184156 Msa1037510:three_prime_UTR 35.0%
! AGATTTGCTTGTGTTGTGTT+CGG + chr7_1:74184203-74184222 None:intergenic 35.0%
TCTTTCACTATCAACTCCTT+TGG - chr7_1:74184416-74184435 Msa1037510:three_prime_UTR 35.0%
CTTAGAAGAATTGGATCCAA+AGG + chr7_1:74184435-74184454 None:intergenic 35.0%
! AAAAGTGTGAATGAATACGG+AGG + chr7_1:74184564-74184583 None:intergenic 35.0%
ACCCTAACTAACTAGAAGAA+AGG + chr7_1:74184641-74184660 None:intergenic 35.0%
TAAACAACGGGCAATTGATA+GGG + chr7_1:74184709-74184728 None:intergenic 35.0%
TTAAACAACGGGCAATTGAT+AGG + chr7_1:74184710-74184729 None:intergenic 35.0%
! TTGAGAAATAGATAACGGTG+GGG + chr7_1:74184759-74184778 None:intergenic 35.0%
! GTTGAGAAATAGATAACGGT+GGG + chr7_1:74184760-74184779 None:intergenic 35.0%
TATAGTGAAATTACCCGGTA+TGG + chr7_1:74184808-74184827 None:intergenic 35.0%
CAATAAGATTTAGGAGCAGA+GGG + chr7_1:74184840-74184859 None:intergenic 35.0%
TCAATAAGATTTAGGAGCAG+AGG + chr7_1:74184841-74184860 None:intergenic 35.0%
!! TTTCTTATATTTTGGACCGG+AGG - chr7_1:74184933-74184952 Msa1037510:CDS 35.0%
!! TTCTTATATTTTGGACCGGA+GGG - chr7_1:74184934-74184953 Msa1037510:CDS 35.0%
!! TTGTTAAATAGCGGATACAG+CGG + chr7_1:74185021-74185040 None:intergenic 35.0%
CTCAGGTATTTGACATAAAC+AGG + chr7_1:74185105-74185124 None:intergenic 35.0%
! CCATATAATTTTCCTCATCG+AGG + chr7_1:74185169-74185188 None:intergenic 35.0%
CCTCGATGAGGAAAATTATA+TGG - chr7_1:74185166-74185185 Msa1037510:intron 35.0%
TGTTGAAGAACACGAATATG+AGG - chr7_1:74185268-74185287 Msa1037510:intron 35.0%
!!! TTTTTTCTCCTTCGGGAAAT+TGG + chr7_1:74185322-74185341 None:intergenic 35.0%
!!! ATGGTCACTTTTTTCTCCTT+CGG + chr7_1:74185330-74185349 None:intergenic 35.0%
! GAAACTTTTCATTTCAGCGT+AGG - chr7_1:74185559-74185578 Msa1037510:intron 35.0%
GATATCAGGGAAAAACTTTG+AGG - chr7_1:74185856-74185875 Msa1037510:intron 35.0%
ACCAAACACAGGTTATTCAT+TGG - chr7_1:74185894-74185913 Msa1037510:intron 35.0%
ACCAATGAATAACCTGTGTT+TGG + chr7_1:74185898-74185917 None:intergenic 35.0%
! GCATTGATCTCATAAAGGTT+TGG - chr7_1:74185988-74186007 Msa1037510:intron 35.0%
!! CGATTTCTGCTTTGATTTTG+AGG + chr7_1:74186098-74186117 None:intergenic 35.0%
CAAAATCAAAGCAGAAATCG+TGG - chr7_1:74186098-74186117 Msa1037510:intron 35.0%
! TGTGATTTTCTGGATGAATG+TGG - chr7_1:74186275-74186294 Msa1037510:intron 35.0%
GAAGAAAAAGAGCAGGAAAA+GGG + chr7_1:74186388-74186407 None:intergenic 35.0%
AGAAGAAAAAGAGCAGGAAA+AGG + chr7_1:74186389-74186408 None:intergenic 35.0%
GTAGATAAAAATCAGAGGCA+TGG + chr7_1:74186547-74186566 None:intergenic 35.0%
TTGTGATATGCCTTCACATA+GGG + chr7_1:74186617-74186636 None:intergenic 35.0%
GCATATCACAAGTTTATGTG+AGG - chr7_1:74186626-74186645 Msa1037510:intron 35.0%
!!! GACCTTTTGAAGTATGACTA+TGG - chr7_1:74186728-74186747 Msa1037510:intron 35.0%
CACCATAGTCATACTTCAAA+AGG + chr7_1:74186733-74186752 None:intergenic 35.0%
TTACAATAACCTGTCGATGT+AGG - chr7_1:74186899-74186918 Msa1037510:intron 35.0%
!!! TTGTTTTGAACCTTTTGACC+TGG - chr7_1:74187168-74187187 Msa1037510:intron 35.0%
AAAAAAACGAGAGCCACATT+CGG + chr7_1:74187291-74187310 None:intergenic 35.0%
!! CTTCCCTCTCATCATTTTTA+TGG + chr7_1:74187314-74187333 None:intergenic 35.0%
CGGATCGTAATATTATTGGT+GGG + chr7_1:74187771-74187790 None:intergenic 35.0%
ACGGATCGTAATATTATTGG+TGG + chr7_1:74187772-74187791 None:intergenic 35.0%
TTTCTATACCCAAGATCCTT+AGG - chr7_1:74187815-74187834 Msa1037510:intron 35.0%
AGATTTCACCTAAGGATCTT+GGG + chr7_1:74187826-74187845 None:intergenic 35.0%
ATGAGGGAAAAAATAGAGCA+TGG + chr7_1:74187861-74187880 None:intergenic 35.0%
TAAACTAGGAATAATTGGGC+AGG + chr7_1:74187895-74187914 None:intergenic 35.0%
GCCCAATTATTCCTAGTTTA+AGG - chr7_1:74187895-74187914 Msa1037510:intron 35.0%
GAGAACAGGCAAAAAACAAA+AGG + chr7_1:74188168-74188187 None:intergenic 35.0%
TAATCAATGAGAAGGAGAAC+AGG + chr7_1:74188182-74188201 None:intergenic 35.0%
ATGCTAGAATCTATCACATG+CGG - chr7_1:74188313-74188332 Msa1037510:CDS 35.0%
CAGATAAAATTGCGAGACAA+GGG + chr7_1:74188412-74188431 None:intergenic 35.0%
GATGCTTTCAAATTTCAGCA+TGG + chr7_1:74188529-74188548 None:intergenic 35.0%
TGTTCAGTAGTAACATTCTC+AGG + chr7_1:74188695-74188714 None:intergenic 35.0%
GTTTCATTCATTATGCTGAG+AGG - chr7_1:74188798-74188817 Msa1037510:CDS 35.0%
AAAAACAGACAAACTTGCAG+GGG + chr7_1:74188911-74188930 None:intergenic 35.0%
GAAAAAACAGACAAACTTGC+AGG + chr7_1:74188913-74188932 None:intergenic 35.0%
CAATAACAACTTCAAGAGCT+TGG + chr7_1:74189136-74189155 None:intergenic 35.0%
! GAAATCTTTATGGCTCTGTA+GGG - chr7_1:74189255-74189274 Msa1037510:intron 35.0%
! AAATCTTTATGGCTCTGTAG+GGG - chr7_1:74189256-74189275 Msa1037510:intron 35.0%
ACAACAGATATTTGCAAGTG+TGG - chr7_1:74189331-74189350 Msa1037510:intron 35.0%
ATCGAACAGCCAATGATATA+TGG - chr7_1:74189416-74189435 Msa1037510:intron 35.0%
AACAGCCAATGATATATGGT+AGG - chr7_1:74189420-74189439 Msa1037510:intron 35.0%
ACAGCCAATGATATATGGTA+GGG - chr7_1:74189421-74189440 Msa1037510:intron 35.0%
TTTACCTCCTACCACTAATA+GGG + chr7_1:74189721-74189740 None:intergenic 35.0%
ATTTACCTCCTACCACTAAT+AGG + chr7_1:74189722-74189741 None:intergenic 35.0%
AATAGAAATATCACTGGTCC+TGG + chr7_1:74189901-74189920 None:intergenic 35.0%
GCATTACAAGCAGAAAAAGT+TGG + chr7_1:74189945-74189964 None:intergenic 35.0%
! CTTTTTCTGCTTGTAATGCT+TGG - chr7_1:74189946-74189965 Msa1037510:intron 35.0%
ATGCGACAACAAAAAGTCAA+GGG + chr7_1:74190067-74190086 None:intergenic 35.0%
! CACACCCTCATTTTGTGTTT+TGG - chr7_1:74184075-74184094 Msa1037510:three_prime_UTR 40.0%
CTCTTTCTCTCTCTCTTCAA+AGG - chr7_1:74184136-74184155 Msa1037510:three_prime_UTR 40.0%
! GGGTTTTACTTATGGATGGA+TGG - chr7_1:74184672-74184691 Msa1037510:intron 40.0%
! GGTTGAGAAATAGATAACGG+TGG + chr7_1:74184761-74184780 None:intergenic 40.0%
ATTACCCGGTATGGAATACT+AGG + chr7_1:74184799-74184818 None:intergenic 40.0%
TGATTAATGTGTGATCCTGC+AGG - chr7_1:74185073-74185092 Msa1037510:intron 40.0%
ATAAACAGGTAAACACCTGC+AGG + chr7_1:74185091-74185110 None:intergenic 40.0%
CAAAAAGACCAATTTCCCGA+AGG - chr7_1:74185311-74185330 Msa1037510:intron 40.0%
!!! TGGTCACTTTTTTCTCCTTC+GGG + chr7_1:74185329-74185348 None:intergenic 40.0%
GAAGGAGAAAAAAGTGACCA+TGG - chr7_1:74185329-74185348 Msa1037510:intron 40.0%
ATAAAGACTTCAGACCCATG+AGG + chr7_1:74185434-74185453 None:intergenic 40.0%
! CATGGGTCTGAAGTCTTTAT+TGG - chr7_1:74185434-74185453 Msa1037510:CDS 40.0%
ACCTCAACAATATCACCCAT+GGG + chr7_1:74185509-74185528 None:intergenic 40.0%
TTAATCAAAGACAGGGAGAC+TGG - chr7_1:74185635-74185654 Msa1037510:intron 40.0%
! CGTGGGTTATAAAACAAAGG+AGG - chr7_1:74185679-74185698 Msa1037510:intron 40.0%
GGGTTATAAAACAAAGGAGG+TGG - chr7_1:74185682-74185701 Msa1037510:intron 40.0%
CATTCCAAAAACATGGACAG+AGG - chr7_1:74185920-74185939 Msa1037510:intron 40.0%
! TCATCCTCTGTCCATGTTTT+TGG + chr7_1:74185927-74185946 None:intergenic 40.0%
AGATCAATGCTTTCAACTCC+GGG + chr7_1:74185978-74185997 None:intergenic 40.0%
GAGATCAATGCTTTCAACTC+CGG + chr7_1:74185979-74185998 None:intergenic 40.0%
ACGACAAAAGATGTCAAGTG+TGG - chr7_1:74186166-74186185 Msa1037510:intron 40.0%
CGACAAAAGATGTCAAGTGT+GGG - chr7_1:74186167-74186186 Msa1037510:intron 40.0%
! TTCACAGGTGTGTGATTTTC+TGG - chr7_1:74186265-74186284 Msa1037510:intron 40.0%
! AATCAGTTTAGGTTCCACAG+GGG + chr7_1:74186423-74186442 None:intergenic 40.0%
! CAATCAGTTTAGGTTCCACA+GGG + chr7_1:74186424-74186443 None:intergenic 40.0%
GTTGCTTATTCCCTATGTGA+AGG - chr7_1:74186604-74186623 Msa1037510:intron 40.0%
CTTGTGATATGCCTTCACAT+AGG + chr7_1:74186618-74186637 None:intergenic 40.0%
TGAGGAATCATAGTGTTCTG+CGG - chr7_1:74186644-74186663 Msa1037510:intron 40.0%
CATCTCTCATACGTCGTTTA+GGG + chr7_1:74187245-74187264 None:intergenic 40.0%
TCATCTCTCATACGTCGTTT+AGG + chr7_1:74187246-74187265 None:intergenic 40.0%
GAGATTTCACCTAAGGATCT+TGG + chr7_1:74187827-74187846 None:intergenic 40.0%
CAAACTCGAGATTTCACCTA+AGG + chr7_1:74187834-74187853 None:intergenic 40.0%
AAAGTAACTTTGCAGCAGAG+TGG + chr7_1:74188023-74188042 None:intergenic 40.0%
GTCAAAAGTGAATGGAAGAG+AGG + chr7_1:74188052-74188071 None:intergenic 40.0%
CAAAACCGCATCAGTTAACA+AGG + chr7_1:74188213-74188232 None:intergenic 40.0%
! CTTGTTAACTGATGCGGTTT+TGG - chr7_1:74188211-74188230 Msa1037510:CDS 40.0%
GCAGATAAAATTGCGAGACA+AGG + chr7_1:74188413-74188432 None:intergenic 40.0%
TCATGGGGAAGTAACAAAAG+TGG - chr7_1:74188736-74188755 Msa1037510:CDS 40.0%
!!! GTTTTTTCTTTCTTCGACGG+AGG - chr7_1:74188925-74188944 Msa1037510:CDS 40.0%
!! AAGAGTGTCACTGGTCTTAT+TGG - chr7_1:74189039-74189058 Msa1037510:CDS 40.0%
!!! TCAGGTTTTTTTTCAGCCTG+AGG + chr7_1:74189164-74189183 None:intergenic 40.0%
CAGGCTGAAAAAAAACCTGA+TGG - chr7_1:74189164-74189183 Msa1037510:intron 40.0%
GCTGAAAAAAAACCTGATGG+AGG - chr7_1:74189167-74189186 Msa1037510:intron 40.0%
AAGTTACCATAACCAGGATG+TGG + chr7_1:74189230-74189249 None:intergenic 40.0%
! GGAAATCTTTATGGCTCTGT+AGG - chr7_1:74189254-74189273 Msa1037510:intron 40.0%
CAGCCAATGATATATGGTAG+GGG - chr7_1:74189422-74189441 Msa1037510:intron 40.0%
!! GTTCCAATGGTTTTACCAGA+TGG - chr7_1:74189470-74189489 Msa1037510:intron 40.0%
! GTTTTACCAGATGGTCGAAT+TGG - chr7_1:74189479-74189498 Msa1037510:intron 40.0%
GAAGATATCGACCCTATTAG+TGG - chr7_1:74189707-74189726 Msa1037510:intron 40.0%
ATATCGACCCTATTAGTGGT+AGG - chr7_1:74189711-74189730 Msa1037510:intron 40.0%
ATCACATGGTTGTGTCTTCT+TGG - chr7_1:74189754-74189773 Msa1037510:intron 40.0%
CATCAGTTCAGGATTGAGAA+AGG + chr7_1:74189826-74189845 None:intergenic 40.0%
ATCCTGAACTGATGAGAAGA+AGG - chr7_1:74189832-74189851 Msa1037510:intron 40.0%
TCCTGAACTGATGAGAAGAA+GGG - chr7_1:74189833-74189852 Msa1037510:intron 40.0%
CATGCGACAACAAAAAGTCA+AGG + chr7_1:74190068-74190087 None:intergenic 40.0%
TAGATTTCCATCACATGGCC+TGG - chr7_1:74184598-74184617 Msa1037510:intron 45.0%
GTTCATTTAAACAACGGGCC+AGG + chr7_1:74184619-74184638 None:intergenic 45.0%
! AAATAGATAACGGTGGGGTG+GGG + chr7_1:74184754-74184773 None:intergenic 45.0%
! GAAATAGATAACGGTGGGGT+GGG + chr7_1:74184755-74184774 None:intergenic 45.0%
! AGAAATAGATAACGGTGGGG+TGG + chr7_1:74184756-74184775 None:intergenic 45.0%
AGCTGCCTAGTATTCCATAC+CGG - chr7_1:74184791-74184810 Msa1037510:intron 45.0%
ACGCAATTTAATGCTCCCTC+CGG + chr7_1:74184952-74184971 None:intergenic 45.0%
TCTGCACCTTCTGACATGAT+TGG + chr7_1:74185128-74185147 None:intergenic 45.0%
AGAGATGGACGATGATGTTG+AGG - chr7_1:74185190-74185209 Msa1037510:intron 45.0%
GAGGAACAGATAGATGACGA+TGG - chr7_1:74185209-74185228 Msa1037510:intron 45.0%
ACAGATAGATGACGATGGAG+TGG - chr7_1:74185214-74185233 Msa1037510:intron 45.0%
ATAGATGACGATGGAGTGGA+TGG - chr7_1:74185218-74185237 Msa1037510:intron 45.0%
GGCGAAGATGAAAATGCTGA+AGG - chr7_1:74185242-74185261 Msa1037510:intron 45.0%
ACCAGCTCTCATTGATGAAG+AGG - chr7_1:74185373-74185392 Msa1037510:CDS 45.0%
TCCTCTTCATCAATGAGAGC+TGG + chr7_1:74185377-74185396 None:intergenic 45.0%
! GGGTCTGAAGTCTTTATTGG+CGG - chr7_1:74185437-74185456 Msa1037510:CDS 45.0%
!! TCTTTATTGGCGGACTTCCT+CGG - chr7_1:74185447-74185466 Msa1037510:CDS 45.0%
ATACATGTGACGACGATGTC+AGG - chr7_1:74185471-74185490 Msa1037510:CDS 45.0%
TACATGTGACGACGATGTCA+GGG - chr7_1:74185472-74185491 Msa1037510:CDS 45.0%
GACCTCAACAATATCACCCA+TGG + chr7_1:74185510-74185529 None:intergenic 45.0%
TTTCAGCGTAGGGAACAAGT+TGG - chr7_1:74185570-74185589 Msa1037510:intron 45.0%
TTCAGCGTAGGGAACAAGTT+GGG - chr7_1:74185571-74185590 Msa1037510:intron 45.0%
AAGCAAGGGTTATGCTTTCG+TGG - chr7_1:74185661-74185680 Msa1037510:intron 45.0%
AGCAAGGGTTATGCTTTCGT+GGG - chr7_1:74185662-74185681 Msa1037510:intron 45.0%
! TGCTGTCTGAAACCAAACAC+AGG - chr7_1:74185883-74185902 Msa1037510:intron 45.0%
CATGGACAGAGGATGAGTTT+AGG - chr7_1:74185931-74185950 Msa1037510:intron 45.0%
TGAGTTTAGGAAAGCCGTTG+AGG - chr7_1:74185944-74185963 Msa1037510:intron 45.0%
GAGTTTAGGAAAGCCGTTGA+GGG - chr7_1:74185945-74185964 Msa1037510:intron 45.0%
AGTGTGGGTTTCAAGCTAGA+TGG - chr7_1:74186182-74186201 Msa1037510:intron 45.0%
! TATCACACCGACTGTCACAT+GGG - chr7_1:74186205-74186224 Msa1037510:intron 45.0%
!!! TCTTTTTTCATGACCCCCTG+TGG - chr7_1:74186406-74186425 Msa1037510:intron 45.0%
! ATCAGTTTAGGTTCCACAGG+GGG + chr7_1:74186422-74186441 None:intergenic 45.0%
! CCAATCAGTTTAGGTTCCAC+AGG + chr7_1:74186425-74186444 None:intergenic 45.0%
CCTGTGGAACCTAAACTGAT+TGG - chr7_1:74186422-74186441 Msa1037510:intron 45.0%
TATGTATGGGCTCTCTATCC+TGG - chr7_1:74187060-74187079 Msa1037510:intron 45.0%
AACGACGTATGAGAGATGAG+TGG - chr7_1:74187247-74187266 Msa1037510:intron 45.0%
!! TTTGTGCTGATTGCCGAATG+TGG - chr7_1:74187275-74187294 Msa1037510:intron 45.0%
AGGAATAATTGGGCAGGAGA+GGG + chr7_1:74187889-74187908 None:intergenic 45.0%
TAGGAATAATTGGGCAGGAG+AGG + chr7_1:74187890-74187909 None:intergenic 45.0%
CATGCAGCACAAAGAAGACT+TGG + chr7_1:74188296-74188315 None:intergenic 45.0%
TACTAGTCGACAAACATCGC+AGG + chr7_1:74188438-74188457 None:intergenic 45.0%
! TTGGGACTTTTGCAGAATGC+TGG - chr7_1:74188469-74188488 Msa1037510:CDS 45.0%
! AAGGAGCTATTTCGTCGTCA+TGG - chr7_1:74188719-74188738 Msa1037510:CDS 45.0%
! AGGAGCTATTTCGTCGTCAT+GGG - chr7_1:74188720-74188739 Msa1037510:CDS 45.0%
! GCTTCAGGGAAACGTGATTT+TGG - chr7_1:74188776-74188795 Msa1037510:CDS 45.0%
! AGTTGTTATTGCGAAGCCTC+AGG - chr7_1:74189145-74189164 Msa1037510:intron 45.0%
TTGTACGCATAACCTCCATC+AGG + chr7_1:74189182-74189201 None:intergenic 45.0%
GATGTGGAAGATGGTTAGGA+TGG + chr7_1:74189214-74189233 None:intergenic 45.0%
CATAACCAGGATGTGGAAGA+TGG + chr7_1:74189223-74189242 None:intergenic 45.0%
CATCTTCCACATCCTGGTTA+TGG - chr7_1:74189221-74189240 Msa1037510:intron 45.0%
CCAGAGAAGTTACCATAACC+AGG + chr7_1:74189236-74189255 None:intergenic 45.0%
CCTGGTTATGGTAACTTCTC+TGG - chr7_1:74189233-74189252 Msa1037510:intron 45.0%
GGACCCCTACCATATATCAT+TGG + chr7_1:74189428-74189447 None:intergenic 45.0%
AGGAATGCAGATGGTTCCAA+TGG - chr7_1:74189457-74189476 Msa1037510:intron 45.0%
CGACCATCTGGTAAAACCAT+TGG + chr7_1:74189476-74189495 None:intergenic 45.0%
ACATAGCCAATTCGACCATC+TGG + chr7_1:74189488-74189507 None:intergenic 45.0%
ATTTCCCCGGTCATTTCTAC+GGG + chr7_1:74189635-74189654 None:intergenic 45.0%
CATTTCCCCGGTCATTTCTA+CGG + chr7_1:74189636-74189655 None:intergenic 45.0%
GGTAGGAGGTAAATGCATTG+TGG - chr7_1:74189728-74189747 Msa1037510:intron 45.0%
ATGCATTGTGGCTCATCACA+TGG - chr7_1:74189740-74189759 Msa1037510:intron 45.0%
ACATGGTTGTGTCTTCTTGG+TGG - chr7_1:74189757-74189776 Msa1037510:intron 45.0%
!! TTGTGTCTTCTTGGTGGTGT+AGG - chr7_1:74189763-74189782 Msa1037510:intron 45.0%
!! TGTGTCTTCTTGGTGGTGTA+GGG - chr7_1:74189764-74189783 Msa1037510:intron 45.0%
TCCCTTCTTCTCATCAGTTC+AGG + chr7_1:74189837-74189856 None:intergenic 45.0%
GTTAAGGTAGGATTAGGACC+AGG - chr7_1:74189880-74189899 Msa1037510:intron 45.0%
!! TACTAATAAATAAATAAATA+GGG - chr7_1:74186809-74186828 Msa1037510:intron 5.0%
!!! ATTAAATTTAAGATTTATTA+AGG + chr7_1:74187425-74187444 None:intergenic 5.0%
! ATGCAAGGGTGCAAGTGAGA+AGG - chr7_1:74184036-74184055 Msa1037510:three_prime_UTR 50.0%
ACTAGGCAGCTGCATTGCAA+AGG + chr7_1:74184782-74184801 None:intergenic 50.0%
GCTGCCTAGTATTCCATACC+GGG - chr7_1:74184792-74184811 Msa1037510:intron 50.0%
GCGCTGTTGCATAGCAGAAT+TGG + chr7_1:74184999-74185018 None:intergenic 50.0%
! CCTTCTGACATGATTGGCTC+AGG + chr7_1:74185122-74185141 None:intergenic 50.0%
CCTGAGCCAATCATGTCAGA+AGG - chr7_1:74185119-74185138 Msa1037510:intron 50.0%
ATATGAGGAGACAGCAGCAG+AGG - chr7_1:74185283-74185302 Msa1037510:intron 50.0%
TTCTTTCCCGTCCTCCTCAT+GGG - chr7_1:74185417-74185436 Msa1037510:CDS 50.0%
AAGACTTCAGACCCATGAGG+AGG + chr7_1:74185431-74185450 None:intergenic 50.0%
!! CTTTATTGGCGGACTTCCTC+GGG - chr7_1:74185448-74185467 Msa1037510:CDS 50.0%
AGGGAATTGTGTGAGCCCAT+GGG - chr7_1:74185491-74185510 Msa1037510:CDS 50.0%
GCCCATGGGTGATATTGTTG+AGG - chr7_1:74185505-74185524 Msa1037510:CDS 50.0%
AGGGAGACTGGAGAAAGCAA+GGG - chr7_1:74185647-74185666 Msa1037510:intron 50.0%
AACAAAGGAGGTGGCACAGA+AGG - chr7_1:74185691-74185710 Msa1037510:intron 50.0%
! GTATCACACCGACTGTCACA+TGG - chr7_1:74186204-74186223 Msa1037510:intron 50.0%
ACTGGTCAGGTGAGGTCTTT+GGG + chr7_1:74186235-74186254 None:intergenic 50.0%
ACCTGTCGATGTAGGTTCGT+CGG - chr7_1:74186907-74186926 Msa1037510:intron 50.0%
CGATGTAGGTTCGTCGGTAA+TGG - chr7_1:74186913-74186932 Msa1037510:intron 50.0%
AGCACACATGTGCGAAAACC+AGG + chr7_1:74187081-74187100 None:intergenic 50.0%
!! GCAAGAGAAGAGCTCTGGAA+CGG + chr7_1:74187146-74187165 None:intergenic 50.0%
CAAACGCAAGAGAAGAGCTC+TGG + chr7_1:74187151-74187170 None:intergenic 50.0%
! GAACCTTTTGACCTGGTCTC+TGG - chr7_1:74187175-74187194 Msa1037510:intron 50.0%
TTGCCAGAGACCAGGTCAAA+AGG + chr7_1:74187181-74187200 None:intergenic 50.0%
GGAAATGTTTGCCAGAGACC+AGG + chr7_1:74187189-74187208 None:intergenic 50.0%
GAGAATCGTGGGACGTAACA+CGG + chr7_1:74187604-74187623 None:intergenic 50.0%
GGAATAATTGGGCAGGAGAG+GGG + chr7_1:74187888-74187907 None:intergenic 50.0%
TAGTCGACAAACATCGCAGG+AGG + chr7_1:74188435-74188454 None:intergenic 50.0%
! GGAGCTATTTCGTCGTCATG+GGG - chr7_1:74188721-74188740 Msa1037510:CDS 50.0%
ACAAAAGTGGTCATGCCACC+TGG - chr7_1:74188749-74188768 Msa1037510:CDS 50.0%
GGAGGTTATGCGTACAATCC+TGG - chr7_1:74189185-74189204 Msa1037510:intron 50.0%
AGATGGTTAGGATGGAGTCC+AGG + chr7_1:74189206-74189225 None:intergenic 50.0%
CCAGGATGTGGAAGATGGTT+AGG + chr7_1:74189218-74189237 None:intergenic 50.0%
CCTAACCATCTTCCACATCC+TGG - chr7_1:74189215-74189234 Msa1037510:intron 50.0%
! TGCTGCTGCTGCTTATCAAC+AGG - chr7_1:74189295-74189314 Msa1037510:intron 50.0%
ATCTGCATTCCTGCTGGCAT+TGG + chr7_1:74189449-74189468 None:intergenic 50.0%
AATGCCAGCAGGAATGCAGA+TGG - chr7_1:74189448-74189467 Msa1037510:intron 50.0%
ATGTTCTGCAGTCAACAGCC+TGG - chr7_1:74189586-74189605 Msa1037510:intron 50.0%
TTTCCCCGGTCATTTCTACG+GGG + chr7_1:74189634-74189653 None:intergenic 50.0%
CGTAGAAATGACCGGGGAAA+TGG - chr7_1:74189634-74189653 Msa1037510:intron 50.0%
! GGAGGTGGTGGTAATGATGA+TGG - chr7_1:74189673-74189692 Msa1037510:intron 50.0%
TCGACCCTATTAGTGGTAGG+AGG - chr7_1:74189714-74189733 Msa1037510:intron 50.0%
!! GTGTCTTCTTGGTGGTGTAG+GGG - chr7_1:74189765-74189784 Msa1037510:intron 50.0%
! TGAGCGTGTTGACCTCGATG+AGG - chr7_1:74185154-74185173 Msa1037510:intron 55.0%
GATGACGATGGAGTGGATGG+AGG - chr7_1:74185221-74185240 Msa1037510:intron 55.0%
GCTCATCTTCTTCAGCGCCA+TGG + chr7_1:74185349-74185368 None:intergenic 55.0%
CTTCTTTCCCGTCCTCCTCA+TGG - chr7_1:74185416-74185435 Msa1037510:CDS 55.0%
TTCAGACCCATGAGGAGGAC+GGG + chr7_1:74185426-74185445 None:intergenic 55.0%
CTTCAGACCCATGAGGAGGA+CGG + chr7_1:74185427-74185446 None:intergenic 55.0%
TCGTCGTCACATGTATCCCG+AGG + chr7_1:74185467-74185486 None:intergenic 55.0%
CAGGGAATTGTGTGAGCCCA+TGG - chr7_1:74185490-74185509 Msa1037510:CDS 55.0%
CAGGGAGACTGGAGAAAGCA+AGG - chr7_1:74185646-74185665 Msa1037510:intron 55.0%
! AGGAAAGCCGTTGAGGGTGT+TGG - chr7_1:74185951-74185970 Msa1037510:intron 55.0%
! GACTGGTCAGGTGAGGTCTT+TGG + chr7_1:74186236-74186255 None:intergenic 55.0%
ACCGACGAACCTACATCGAC+AGG + chr7_1:74186911-74186930 None:intergenic 55.0%
!! AAGAGCTCTGGAACGGCTGA+GGG + chr7_1:74187139-74187158 None:intergenic 55.0%
!! AAAGCGGATCGGTTTGGGCA+AGG + chr7_1:74187210-74187229 None:intergenic 55.0%
! GCTGCAAAGCGGATCGGTTT+GGG + chr7_1:74187215-74187234 None:intergenic 55.0%
TTCTGCGCTGCAAAGCGGAT+CGG + chr7_1:74187221-74187240 None:intergenic 55.0%
AGGGTTTCTGCGCTGCAAAG+CGG + chr7_1:74187226-74187245 None:intergenic 55.0%
GTGAATCGCGGGACGTAACA+CGG + chr7_1:74187791-74187810 None:intergenic 55.0%
GCAGGAGAGGGGAGAAATGA+GGG + chr7_1:74187877-74187896 None:intergenic 55.0%
ATGCCACCTGGCAAAGCTTC+AGG - chr7_1:74188761-74188780 Msa1037510:CDS 55.0%
TGCCACCTGGCAAAGCTTCA+GGG - chr7_1:74188762-74188781 Msa1037510:CDS 55.0%
TTCCCTGAAGCTTTGCCAGG+TGG + chr7_1:74188767-74188786 None:intergenic 55.0%
CGTTTCCCTGAAGCTTTGCC+AGG + chr7_1:74188770-74188789 None:intergenic 55.0%
! CTTTATGGCTCTGTAGGGGC+TGG - chr7_1:74189260-74189279 Msa1037510:intron 55.0%
GGAACCATCTGCATTCCTGC+TGG + chr7_1:74189455-74189474 None:intergenic 55.0%
CAGTCAACAGCCTGGTGTAC+AGG - chr7_1:74189594-74189613 Msa1037510:intron 55.0%
AATGACCGGGGAAATGGTCC+AGG - chr7_1:74189640-74189659 Msa1037510:intron 55.0%
ATGCATCAGATCCCCCCTCA+AGG + chr7_1:74189792-74189811 None:intergenic 55.0%
! AGATAACGGTGGGGTGGGGT+GGG + chr7_1:74184750-74184769 None:intergenic 60.0%
! TAGATAACGGTGGGGTGGGG+TGG + chr7_1:74184751-74184770 None:intergenic 60.0%
TCCGGGACCAACACCCTCAA+CGG + chr7_1:74185961-74185980 None:intergenic 60.0%
GGGTCAGCCCATGTGACAGT+CGG + chr7_1:74186215-74186234 None:intergenic 60.0%
! AGCAGCAGACTGGTCAGGTG+AGG + chr7_1:74186243-74186262 None:intergenic 60.0%
! GAAGCAGCAGCAGACTGGTC+AGG + chr7_1:74186248-74186267 None:intergenic 60.0%
CCTGTGAAGCAGCAGCAGAC+TGG + chr7_1:74186253-74186272 None:intergenic 60.0%
! CCAGTCTGCTGCTGCTTCAC+AGG - chr7_1:74186250-74186269 Msa1037510:intron 60.0%
!! GAAGAGCTCTGGAACGGCTG+AGG + chr7_1:74187140-74187159 None:intergenic 60.0%
CGCTGCAAAGCGGATCGGTT+TGG + chr7_1:74187216-74187235 None:intergenic 60.0%
GGCAGGAGAGGGGAGAAATG+AGG + chr7_1:74187878-74187897 None:intergenic 60.0%
GGCTCTGTAGGGGCTGGATA+TGG - chr7_1:74189266-74189285 Msa1037510:intron 60.0%
CGGTCATTTCTACGGGGTCG+GGG + chr7_1:74189628-74189647 None:intergenic 60.0%
CCGGTCATTTCTACGGGGTC+GGG + chr7_1:74189629-74189648 None:intergenic 60.0%
CCCGACCCCGTAGAAATGAC+CGG - chr7_1:74189626-74189645 Msa1037510:intron 60.0%
CCCGGTCATTTCTACGGGGT+CGG + chr7_1:74189630-74189649 None:intergenic 60.0%
CCGACCCCGTAGAAATGACC+GGG - chr7_1:74189627-74189646 Msa1037510:intron 60.0%
CGACCCCGTAGAAATGACCG+GGG - chr7_1:74189628-74189647 Msa1037510:intron 60.0%
! TGGTGGTGTAGGGGTCCTTG+AGG - chr7_1:74189774-74189793 Msa1037510:intron 60.0%
GGTGGTGTAGGGGTCCTTGA+GGG - chr7_1:74189775-74189794 Msa1037510:intron 60.0%
GTGGTGTAGGGGTCCTTGAG+GGG - chr7_1:74189776-74189795 Msa1037510:intron 60.0%
TGGTGTAGGGGTCCTTGAGG+GGG - chr7_1:74189777-74189796 Msa1037510:intron 60.0%
CAACGGGCCAGGCCATGTGA+TGG + chr7_1:74184608-74184627 None:intergenic 65.0%
GAGGAGACAGCAGCAGAGGC+TGG - chr7_1:74185287-74185306 Msa1037510:intron 65.0%
!! GCCGTTGAGGGTGTTGGTCC+CGG - chr7_1:74185957-74185976 Msa1037510:intron 65.0%
GGTAGGGGTCCAATGCCAGC+AGG - chr7_1:74189437-74189456 Msa1037510:intron 65.0%
CAGCCTGGTGTACAGGTGCC+AGG - chr7_1:74189601-74189620 Msa1037510:intron 65.0%
GGACCTGGCACCTGTACACC+AGG + chr7_1:74189607-74189626 None:intergenic 65.0%
TTTCTACGGGGTCGGGGACC+TGG + chr7_1:74189622-74189641 None:intergenic 65.0%
GACCGGGGAAATGGTCCAGG+CGG - chr7_1:74189643-74189662 Msa1037510:intron 65.0%
ACCGGGGAAATGGTCCAGGC+GGG - chr7_1:74189644-74189663 Msa1037510:intron 65.0%
GGTGTAGGGGTCCTTGAGGG+GGG - chr7_1:74189778-74189797 Msa1037510:intron 65.0%
AACGGTGGGGTGGGGTGGGT+GGG + chr7_1:74184746-74184765 None:intergenic 70.0%
TAACGGTGGGGTGGGGTGGG+TGG + chr7_1:74184747-74184766 None:intergenic 70.0%
GCCCGCCTGGACCATTTCCC+CGG + chr7_1:74189648-74189667 None:intergenic 70.0%
GGAAATGGTCCAGGCGGGCG+TGG - chr7_1:74189649-74189668 Msa1037510:intron 70.0%
AATGGTCCAGGCGGGCGTGG+AGG - chr7_1:74189652-74189671 Msa1037510:intron 70.0%
! GGTCCAGGCGGGCGTGGAGG+AGG - chr7_1:74189655-74189674 Msa1037510:intron 80.0%
! CCACCTCCTCCACGCCCGCC+TGG + chr7_1:74189661-74189680 None:intergenic 80.0%
! CCAGGCGGGCGTGGAGGAGG+TGG - chr7_1:74189658-74189677 Msa1037510:intron 80.0%
! GGCGGGCGTGGAGGAGGTGG+TGG - chr7_1:74189661-74189680 Msa1037510:intron 80.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 74184032 74190173 74184032 ID=Msa1037510;Name=Msa1037510
chr7_1 mRNA 74184032 74190173 74184032 ID=Msa1037510-mRNA-1;Parent=Msa1037510;Name=Msa1037510-mRNA-1;_AED=0.09;_eAED=0.09;_QI=257|1|1|1|1|1|9|447|479
chr7_1 exon 74184032 74184608 74184032 ID=Msa1037510-mRNA-1:exon:18631;Parent=Msa1037510-mRNA-1
chr7_1 exon 74184695 74184780 74184695 ID=Msa1037510-mRNA-1:exon:18630;Parent=Msa1037510-mRNA-1
chr7_1 exon 74184889 74185073 74184889 ID=Msa1037510-mRNA-1:exon:18629;Parent=Msa1037510-mRNA-1
chr7_1 exon 74185336 74185540 74185336 ID=Msa1037510-mRNA-1:exon:18628;Parent=Msa1037510-mRNA-1
chr7_1 exon 74187934 74188113 74187934 ID=Msa1037510-mRNA-1:exon:18627;Parent=Msa1037510-mRNA-1
chr7_1 exon 74188201 74188341 74188201 ID=Msa1037510-mRNA-1:exon:18626;Parent=Msa1037510-mRNA-1
chr7_1 exon 74188460 74188576 74188460 ID=Msa1037510-mRNA-1:exon:18625;Parent=Msa1037510-mRNA-1
chr7_1 exon 74188679 74189110 74188679 ID=Msa1037510-mRNA-1:exon:18624;Parent=Msa1037510-mRNA-1
chr7_1 exon 74189953 74190173 74189953 ID=Msa1037510-mRNA-1:exon:18623;Parent=Msa1037510-mRNA-1
chr7_1 five_prime_UTR 74189953 74190173 74189953 ID=Msa1037510-mRNA-1:five_prime_utr;Parent=Msa1037510-mRNA-1
chr7_1 five_prime_UTR 74189075 74189110 74189075 ID=Msa1037510-mRNA-1:five_prime_utr;Parent=Msa1037510-mRNA-1
chr7_1 CDS 74188679 74189074 74188679 ID=Msa1037510-mRNA-1:cds;Parent=Msa1037510-mRNA-1
chr7_1 CDS 74188460 74188576 74188460 ID=Msa1037510-mRNA-1:cds;Parent=Msa1037510-mRNA-1
chr7_1 CDS 74188201 74188341 74188201 ID=Msa1037510-mRNA-1:cds;Parent=Msa1037510-mRNA-1
chr7_1 CDS 74187934 74188113 74187934 ID=Msa1037510-mRNA-1:cds;Parent=Msa1037510-mRNA-1
chr7_1 CDS 74185336 74185540 74185336 ID=Msa1037510-mRNA-1:cds;Parent=Msa1037510-mRNA-1
chr7_1 CDS 74184889 74185073 74184889 ID=Msa1037510-mRNA-1:cds;Parent=Msa1037510-mRNA-1
chr7_1 CDS 74184695 74184780 74184695 ID=Msa1037510-mRNA-1:cds;Parent=Msa1037510-mRNA-1
chr7_1 CDS 74184479 74184608 74184479 ID=Msa1037510-mRNA-1:cds;Parent=Msa1037510-mRNA-1
chr7_1 three_prime_UTR 74184032 74184478 74184032 ID=Msa1037510-mRNA-1:three_prime_utr;Parent=Msa1037510-mRNA-1
Gene Sequence

>Msa1037510

ATGTCAGAAGGTGCAGAGATCGATGAGCGTGTTGACCTCGATGAGGAAAATTATATGGAAGAGATGGACGATGATGTTGAGGAACAGATAGATGACGATGGAGTGGATGGAGGCGAAGATGAAAATGCTGAAGGTAGTGTTGAAGAACACGAATATGAGGAGACAGCAGCAGAGGCTGGTCAAAAAGACCAATTTCCCGAAGGAGAAAAAAGTGACCATGGCGCTGAAGAAGATGAGCATAAACCAGCTCTCATTGATGAAGAGGAGAGAGAGAAGCATGATGAACTTCTTTCCCGTCCTCCTCATGGGTCTGAAGTCTTTATTGGCGGACTTCCTCGGGATACATGTGACGACGATGTCAGGGAATTGTGTGAGCCCATGGGTGATATTGTTGAGATTAAATTAATCAAAGACAGGGAGACTGGAGAAAGCAAGGGTTATGCTTTCGTGGGTTATAAAACAAAGGAGGTGGCACAGAAGGCCATTGATGATATACATAACAAGGAATTTAAGGGAAAAACTTTGAGGTGTTTGCTGTCTGAAACCAAACACAGGTTATTCATTGGTAACATTCCAAAAACATGGACAGAGGATGAGTTTAGGAAAGCCGTTGAGGGTGTTGGTCCCGGAGTTGAAAGCATTGATCTCATAAAGGACCCTCAAAATCAAAGCAGAAATCGTGGGTTTGCTTTTGTTTTGTATTACAACAACGCATGTGCTGATTATTCACGACAAAAGATGTCAAGTGTGGGTTTCAAGCTAGATGGTATCACACCGACTGTCACATGGGCTGACCCAAAGACCTCACCTGACCAGTCTGCTGCTGCTTCACAGGTTAAAGCTCTATATGTGAAAAACATACCTGAGAATGTTACTACTGAACAACTAAAGGAGCTATTTCGTCGTCATGGGGAAGTAACAAAAGTGGTCATGCCACCTGGCAAAGCTTCAGGGAAACGTGATTTTGGTTTCATTCATTATGCTGAGAGGTCAAGTGCATTGAAAGCTGTAAAAGAGACGGAGAAATATGAAATTGACGGCCAAGCTCTTGAAGTTGTTATTGCGAAGCCTCAGGCTGAAAAAAAACCTGATGGAGGTTATGCGTACAATCCTGGACTCCATCCTAACCATCTTCCACATCCTGGTTATGGTAACTTCTCTGGAAATCTTTATGGCTCTGTAGGGGCTGGATATGGTGTTGCTGCTGCTGCTGCTTATCAACAGCCAATGATATATGGTAGGGGTCCAATGCCAGCAGGAATGCAGATGGTTCCAATGGTTTTACCAGATGGTCGAATTGGCTATGTCCTTCAACAGCCTGGTGTACAGGTGCCAGGTCCCCGACCCCGTAGAAATGACCGGGGAAATGGTCCAGGCGGGCGTGGAGGAGGTGGTGGTAATGATGATGGAAATCGTAATAGAAGATATCGACCCTATTAG
Protein sequence

>Msa1037510

MSEGAEIDERVDLDEENYMEEMDDDVEEQIDDDGVDGGEDENAEGSVEEHEYEETAAEAGQKDQFPEGEKSDHGAEEDEHKPALIDEEEREKHDELLSRPPHGSEVFIGGLPRDTCDDDVRELCEPMGDIVEIKLIKDRETGESKGYAFVGYKTKEVAQKAIDDIHNKEFKGKTLRCLLSETKHRLFIGNIPKTWTEDEFRKAVEGVGPGVESIDLIKDPQNQSRNRGFAFVLYYNNACADYSRQKMSSVGFKLDGITPTVTWADPKTSPDQSAAASQVKALYVKNIPENVTTEQLKELFRRHGEVTKVVMPPGKASGKRDFGFIHYAERSSALKAVKETEKYEIDGQALEVVIAKPQAEKKPDGGYAYNPGLHPNHLPHPGYGNFSGNLYGSVGAGYGVAAAAAYQQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQVPGPRPRRNDRGNGPGGRGGGGGNDDGNRNRRYRPY*