Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1280150 | XP_013444912.1 | 96.648 | 179 | 6 | 0 | 1 | 179 | 1 | 179 | 3.70e-124 | 357 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1280150 | sp|Q58FX0|BAP2_ARATH | 35.294 | 204 | 101 | 5 | 1 | 177 | 6 | 205 | 4.51e-34 | 122 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1280150 | A0A072TNG6 | 96.648 | 179 | 6 | 0 | 1 | 179 | 1 | 179 | 1.77e-124 | 357 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001380 | Msa1280150 | 0.834900 | 2.294253e-56 | -8.615850e-47 |
| Msa0012100 | Msa1280150 | 0.818019 | 2.438273e-52 | -8.615850e-47 |
| Msa0030160 | Msa1280150 | 0.812898 | 3.361721e-51 | -8.615850e-47 |
| Msa0035020 | Msa1280150 | 0.808298 | 3.317523e-50 | -8.615850e-47 |
| Msa0061500 | Msa1280150 | 0.829065 | 6.340095e-55 | -8.615850e-47 |
| Msa0064140 | Msa1280150 | 0.814937 | 1.194538e-51 | -8.615850e-47 |
| Msa0078640 | Msa1280150 | 0.823583 | 1.281359e-53 | -8.615850e-47 |
| Msa0081620 | Msa1280150 | 0.815909 | 7.261990e-52 | -8.615850e-47 |
| Msa0092410 | Msa1280150 | 0.841444 | 4.733729e-58 | -8.615850e-47 |
| Msa0097590 | Msa1280150 | 0.801958 | 7.044016e-49 | -8.615850e-47 |
| Msa0097610 | Msa1280150 | 0.809691 | 1.669703e-50 | -8.615850e-47 |
| Msa0103250 | Msa1280150 | 0.812595 | 3.916822e-51 | -8.615850e-47 |
| Msa0111080 | Msa1280150 | 0.800553 | 1.365545e-48 | -8.615850e-47 |
| Msa0112270 | Msa1280150 | 0.810403 | 1.172946e-50 | -8.615850e-47 |
| Msa0119440 | Msa1280150 | 0.862841 | 3.809041e-64 | -8.615850e-47 |
| Msa0603370 | Msa1280150 | 0.815497 | 8.969080e-52 | -8.615850e-47 |
| Msa0613110 | Msa1280150 | 0.808885 | 2.485839e-50 | -8.615850e-47 |
| Msa0613340 | Msa1280150 | 0.829466 | 5.067231e-55 | -8.615850e-47 |
| Msa0614920 | Msa1280150 | 0.860864 | 1.533810e-63 | -8.615850e-47 |
| Msa0624960 | Msa1280150 | 0.807235 | 5.581994e-50 | -8.615850e-47 |
| Msa0638350 | Msa1280150 | 0.831387 | 1.718457e-55 | -8.615850e-47 |
| Msa0638360 | Msa1280150 | 0.840785 | 7.052119e-58 | -8.615850e-47 |
| Msa0641340 | Msa1280150 | 0.820168 | 7.909014e-53 | -8.615850e-47 |
| Msa0644400 | Msa1280150 | 0.821832 | 3.274049e-53 | -8.615850e-47 |
| Msa0672450 | Msa1280150 | 0.823258 | 1.525713e-53 | -8.615850e-47 |
| Msa0674310 | Msa1280150 | 0.800015 | 1.757177e-48 | -8.615850e-47 |
| Msa0678040 | Msa1280150 | 0.819258 | 1.276706e-52 | -8.615850e-47 |
| Msa0689780 | Msa1280150 | 0.823785 | 1.148599e-53 | -8.615850e-47 |
| Msa0695870 | Msa1280150 | 0.804289 | 2.319719e-49 | -8.615850e-47 |
| Msa0696850 | Msa1280150 | 0.807384 | 5.190759e-50 | -8.615850e-47 |
| Msa0705990 | Msa1280150 | 0.811438 | 7.001758e-51 | -8.615850e-47 |
| Msa0708310 | Msa1280150 | 0.840119 | 1.053558e-57 | -8.615850e-47 |
| Msa0711150 | Msa1280150 | 0.838623 | 2.576949e-57 | -8.615850e-47 |
| Msa0715420 | Msa1280150 | 0.808621 | 2.830875e-50 | -8.615850e-47 |
| Msa0721340 | Msa1280150 | 0.811838 | 5.729990e-51 | -8.615850e-47 |
| Msa0735550 | Msa1280150 | 0.801247 | 9.854172e-49 | -8.615850e-47 |
| Msa0742150 | Msa1280150 | 0.807606 | 4.656257e-50 | -8.615850e-47 |
| Msa0743870 | Msa1280150 | 0.802774 | 4.783080e-49 | -8.615850e-47 |
| Msa0748660 | Msa1280150 | 0.835657 | 1.476805e-56 | -8.615850e-47 |
| Msa0764920 | Msa1280150 | 0.807197 | 5.684503e-50 | -8.615850e-47 |
| Msa0779260 | Msa1280150 | 0.806396 | 8.394955e-50 | -8.615850e-47 |
| Msa0810270 | Msa1280150 | 0.820465 | 6.760696e-53 | -8.615850e-47 |
| Msa0813260 | Msa1280150 | 0.847556 | 1.072891e-59 | -8.615850e-47 |
| Msa0823440 | Msa1280150 | 0.808936 | 2.423628e-50 | -8.615850e-47 |
| Msa0825870 | Msa1280150 | 0.801177 | 1.018093e-48 | -8.615850e-47 |
| Msa0831850 | Msa1280150 | 0.807260 | 5.513805e-50 | -8.615850e-47 |
| Msa0125650 | Msa1280150 | 0.815727 | 7.972696e-52 | -8.615850e-47 |
| Msa0136630 | Msa1280150 | 0.825516 | 4.491603e-54 | -8.615850e-47 |
| Msa0137800 | Msa1280150 | 0.832662 | 8.318601e-56 | -8.615850e-47 |
| Msa0138020 | Msa1280150 | 0.817362 | 3.430705e-52 | -8.615850e-47 |
| Msa0138900 | Msa1280150 | 0.806859 | 6.702516e-50 | -8.615850e-47 |
| Msa0152560 | Msa1280150 | 0.840413 | 8.825726e-58 | -8.615850e-47 |
| Msa0155210 | Msa1280150 | 0.803745 | 3.009940e-49 | -8.615850e-47 |
| Msa0160960 | Msa1280150 | 0.828246 | 1.000306e-54 | -8.615850e-47 |
| Msa0162690 | Msa1280150 | 0.851971 | 6.269726e-61 | -8.615850e-47 |
| Msa0178510 | Msa1280150 | 0.807293 | 5.424292e-50 | -8.615850e-47 |
| Msa0187310 | Msa1280150 | 0.823757 | 1.166570e-53 | -8.615850e-47 |
| Msa0187830 | Msa1280150 | 0.857206 | 1.910915e-62 | -8.615850e-47 |
| Msa0189040 | Msa1280150 | 0.813052 | 3.111624e-51 | -8.615850e-47 |
| Msa0189610 | Msa1280150 | 0.813839 | 2.088425e-51 | -8.615850e-47 |
| Msa0201570 | Msa1280150 | 0.860073 | 2.663171e-63 | -8.615850e-47 |
| Msa0217700 | Msa1280150 | 0.804713 | 1.892697e-49 | -8.615850e-47 |
| Msa0220730 | Msa1280150 | 0.802865 | 4.579623e-49 | -8.615850e-47 |
| Msa0232020 | Msa1280150 | 0.803475 | 3.425584e-49 | -8.615850e-47 |
| Msa1225100 | Msa1280150 | 0.897847 | 9.445540e-77 | -8.615850e-47 |
| Msa1238690 | Msa1280150 | 0.890341 | 1.075657e-73 | -8.615850e-47 |
| Msa1246700 | Msa1280150 | 0.858602 | 7.358014e-63 | -8.615850e-47 |
| Msa1259860 | Msa1280150 | 0.831378 | 1.727214e-55 | -8.615850e-47 |
| Msa1260680 | Msa1280150 | 0.812114 | 4.988916e-51 | -8.615850e-47 |
| Msa1262020 | Msa1280150 | 0.805756 | 1.144808e-49 | -8.615850e-47 |
| Msa1270660 | Msa1280150 | 0.823587 | 1.278004e-53 | -8.615850e-47 |
| Msa1276340 | Msa1280150 | 0.807321 | 5.352682e-50 | -8.615850e-47 |
| Msa1279480 | Msa1280150 | 0.808810 | 2.579675e-50 | -8.615850e-47 |
| Msa1280140 | Msa1280150 | 0.805391 | 1.365254e-49 | -8.615850e-47 |
| Msa1280150 | Msa1280170 | 0.870031 | 1.983580e-66 | -8.615850e-47 |
| Msa1280150 | Msa1285200 | 0.837516 | 4.963352e-57 | -8.615850e-47 |
| Msa1280150 | Msa1291830 | 0.816904 | 4.347856e-52 | -8.615850e-47 |
| Msa1280150 | Msa1307180 | 0.806141 | 9.499081e-50 | -8.615850e-47 |
| Msa1280150 | Msa1329870 | 0.896848 | 2.487338e-76 | -8.615850e-47 |
| Msa1280150 | Msa1332050 | 0.831343 | 1.761840e-55 | -8.615850e-47 |
| Msa1280150 | Msa1335230 | 0.808175 | 3.524023e-50 | -8.615850e-47 |
| Msa1280150 | Msa1338400 | 0.831021 | 2.113797e-55 | -8.615850e-47 |
| Msa1280150 | Msa1353890 | 0.827805 | 1.276864e-54 | -8.615850e-47 |
| Msa1280150 | Msa1355890 | 0.835644 | 1.487930e-56 | -8.615850e-47 |
| Msa1280150 | Msa1365270 | 0.859470 | 4.045602e-63 | -8.615850e-47 |
| Msa1280150 | Msa1365610 | 0.837004 | 6.711821e-57 | -8.615850e-47 |
| Msa1280150 | Msa1367530 | 0.803409 | 3.534171e-49 | -8.615850e-47 |
| Msa1280150 | Msa1372150 | 0.801666 | 8.085718e-49 | -8.615850e-47 |
| Msa1280150 | Msa1376450 | 0.862694 | 4.225491e-64 | -8.615850e-47 |
| Msa1280150 | Msa1380220 | 0.839987 | 1.140288e-57 | -8.615850e-47 |
| Msa1280150 | Msa1381480 | 0.804841 | 1.780260e-49 | -8.615850e-47 |
| Msa1280150 | Msa1382790 | 0.823045 | 1.710612e-53 | -8.615850e-47 |
| Msa1280150 | Msa1391550 | 0.875454 | 3.042351e-68 | -8.615850e-47 |
| Msa1280150 | Msa1394310 | 0.801325 | 9.495641e-49 | -8.615850e-47 |
| Msa1280150 | Msa1400930 | 0.802887 | 4.531657e-49 | -8.615850e-47 |
| Msa1280150 | Msa1405220 | 0.890996 | 5.939990e-74 | -8.615850e-47 |
| Msa1280150 | Msa1407190 | 0.808144 | 3.577424e-50 | -8.615850e-47 |
| Msa1280150 | Msa1408050 | 0.840629 | 7.749243e-58 | -8.615850e-47 |
| Msa1280150 | Msa1420270 | 0.829524 | 4.904952e-55 | -8.615850e-47 |
| Msa1280150 | Msa1421900 | 0.803981 | 2.689705e-49 | -8.615850e-47 |
| Msa1280150 | Msa1424630 | 0.842358 | 2.714661e-58 | -8.615850e-47 |
| Msa1280150 | Msa1428780 | 0.806187 | 9.290371e-50 | -8.615850e-47 |
| Msa1280150 | Msa1430130 | 0.804807 | 1.809254e-49 | -8.615850e-47 |
| Msa1280150 | Msa1430550 | 0.820501 | 6.634239e-53 | -8.615850e-47 |
| Msa1280150 | Msa1432130 | 0.821251 | 4.459076e-53 | -8.615850e-47 |
| Msa1280150 | Msa1437730 | 0.805237 | 1.470534e-49 | -8.615850e-47 |
| Msa1280150 | Msa1444260 | 0.816940 | 4.268071e-52 | -8.615850e-47 |
| Msa1280150 | Msa1446330 | 0.834491 | 2.906228e-56 | -8.615850e-47 |
| Msa1280150 | Msa1457160 | 0.857524 | 1.539634e-62 | -8.615850e-47 |
| Msa1280150 | Msa1458340 | 0.842697 | 2.207353e-58 | -8.615850e-47 |
| Msa1280150 | Msa1460750 | 0.804168 | 2.459301e-49 | -8.615850e-47 |
| Msa1280150 | Msa1460800 | 0.811499 | 6.791278e-51 | -8.615850e-47 |
| Msa1280150 | Msa1462360 | 0.811188 | 7.931163e-51 | -8.615850e-47 |
| Msa0364790 | Msa1280150 | 0.824819 | 6.566149e-54 | -8.615850e-47 |
| Msa0369920 | Msa1280150 | 0.828615 | 8.149420e-55 | -8.615850e-47 |
| Msa0371950 | Msa1280150 | 0.833246 | 5.953738e-56 | -8.615850e-47 |
| Msa0377840 | Msa1280150 | 0.820203 | 7.765761e-53 | -8.615850e-47 |
| Msa0380600 | Msa1280150 | 0.816021 | 6.855510e-52 | -8.615850e-47 |
| Msa0382370 | Msa1280150 | 0.830694 | 2.542174e-55 | -8.615850e-47 |
| Msa0382490 | Msa1280150 | 0.829707 | 4.427782e-55 | -8.615850e-47 |
| Msa0389210 | Msa1280150 | 0.817738 | 2.822109e-52 | -8.615850e-47 |
| Msa0390530 | Msa1280150 | 0.804631 | 1.968645e-49 | -8.615850e-47 |
| Msa0394470 | Msa1280150 | 0.821175 | 4.644045e-53 | -8.615850e-47 |
| Msa0398200 | Msa1280150 | 0.807080 | 6.018752e-50 | -8.615850e-47 |
| Msa0408340 | Msa1280150 | 0.810568 | 1.080468e-50 | -8.615850e-47 |
| Msa0410860 | Msa1280150 | 0.814437 | 1.541352e-51 | -8.615850e-47 |
| Msa0417330 | Msa1280150 | 0.819373 | 1.201433e-52 | -8.615850e-47 |
| Msa0418400 | Msa1280150 | 0.819005 | 1.457463e-52 | -8.615850e-47 |
| Msa0422180 | Msa1280150 | 0.815635 | 8.356337e-52 | -8.615850e-47 |
| Msa0426560 | Msa1280150 | 0.833392 | 5.474585e-56 | -8.615850e-47 |
| Msa0430240 | Msa1280150 | 0.816304 | 5.923859e-52 | -8.615850e-47 |
| Msa0432160 | Msa1280150 | 0.839513 | 1.514809e-57 | -8.615850e-47 |
| Msa0432670 | Msa1280150 | 0.841091 | 5.861469e-58 | -8.615850e-47 |
| Msa0437070 | Msa1280150 | 0.803995 | 2.671786e-49 | -8.615850e-47 |
| Msa0472770 | Msa1280150 | 0.831265 | 1.840769e-55 | -8.615850e-47 |
| Msa0473140 | Msa1280150 | 0.818027 | 2.428879e-52 | -8.615850e-47 |
| Msa0476680 | Msa1280150 | 0.839163 | 1.867541e-57 | -8.615850e-47 |
| Msa0481970 | Msa1280150 | 0.814664 | 1.372830e-51 | -8.615850e-47 |
| Msa0482180 | Msa1280150 | 0.817135 | 3.857899e-52 | -8.615850e-47 |
| Msa0980020 | Msa1280150 | 0.802557 | 5.302947e-49 | -8.615850e-47 |
| Msa0999680 | Msa1280150 | 0.807391 | 5.171997e-50 | -8.615850e-47 |
| Msa1001390 | Msa1280150 | 0.802194 | 6.299411e-49 | -8.615850e-47 |
| Msa1007230 | Msa1280150 | 0.810333 | 1.214139e-50 | -8.615850e-47 |
| Msa1011090 | Msa1280150 | 0.806554 | 7.774712e-50 | -8.615850e-47 |
| Msa1026940 | Msa1280150 | 0.809304 | 2.021471e-50 | -8.615850e-47 |
| Msa1034500 | Msa1280150 | 0.800347 | 1.504079e-48 | -8.615850e-47 |
| Msa1039710 | Msa1280150 | -0.802131 | 6.489408e-49 | -8.615850e-47 |
| Msa1042660 | Msa1280150 | 0.802639 | 5.100334e-49 | -8.615850e-47 |
| Msa1043120 | Msa1280150 | 0.835788 | 1.368461e-56 | -8.615850e-47 |
| Msa1063420 | Msa1280150 | 0.830277 | 3.214563e-55 | -8.615850e-47 |
| Msa1064250 | Msa1280150 | 0.824289 | 8.750139e-54 | -8.615850e-47 |
| Msa1076960 | Msa1280150 | 0.806000 | 1.017303e-49 | -8.615850e-47 |
| Msa1089450 | Msa1280150 | 0.816759 | 4.686490e-52 | -8.615850e-47 |
| Msa1100930 | Msa1280150 | 0.834415 | 3.037881e-56 | -8.615850e-47 |
| Msa1104560 | Msa1280150 | 0.803357 | 3.622580e-49 | -8.615850e-47 |
| Msa0240270 | Msa1280150 | 0.847140 | 1.396038e-59 | -8.615850e-47 |
| Msa0244140 | Msa1280150 | 0.832412 | 9.593125e-56 | -8.615850e-47 |
| Msa0244190 | Msa1280150 | 0.847119 | 1.414740e-59 | -8.615850e-47 |
| Msa0259440 | Msa1280150 | 0.815842 | 7.515084e-52 | -8.615850e-47 |
| Msa0259580 | Msa1280150 | 0.813522 | 2.452556e-51 | -8.615850e-47 |
| Msa0267790 | Msa1280150 | 0.812811 | 3.513240e-51 | -8.615850e-47 |
| Msa0269560 | Msa1280150 | 0.828789 | 7.395008e-55 | -8.615850e-47 |
| Msa0271550 | Msa1280150 | 0.817032 | 4.068815e-52 | -8.615850e-47 |
| Msa0276280 | Msa1280150 | 0.823057 | 1.699968e-53 | -8.615850e-47 |
| Msa0282720 | Msa1280150 | 0.846282 | 2.395238e-59 | -8.615850e-47 |
| Msa0291280 | Msa1280150 | 0.807748 | 4.343745e-50 | -8.615850e-47 |
| Msa0296820 | Msa1280150 | 0.816424 | 5.569617e-52 | -8.615850e-47 |
| Msa0305620 | Msa1280150 | 0.830396 | 3.007099e-55 | -8.615850e-47 |
| Msa0308460 | Msa1280150 | 0.800735 | 1.253655e-48 | -8.615850e-47 |
| Msa0311610 | Msa1280150 | 0.817503 | 3.188207e-52 | -8.615850e-47 |
| Msa0314000 | Msa1280150 | 0.800707 | 1.270489e-48 | -8.615850e-47 |
| Msa0317970 | Msa1280150 | 0.828358 | 9.398595e-55 | -8.615850e-47 |
| Msa0319290 | Msa1280150 | 0.831044 | 2.085977e-55 | -8.615850e-47 |
| Msa0322680 | Msa1280150 | 0.816535 | 5.260708e-52 | -8.615850e-47 |
| Msa0333650 | Msa1280150 | 0.805114 | 1.560661e-49 | -8.615850e-47 |
| Msa0347750 | Msa1280150 | 0.849925 | 2.364435e-60 | -8.615850e-47 |
| Msa0357830 | Msa1280150 | 0.809552 | 1.788834e-50 | -8.615850e-47 |
| Msa0357840 | Msa1280150 | 0.803910 | 2.781589e-49 | -8.615850e-47 |
| Msa1111870 | Msa1280150 | 0.808125 | 3.610503e-50 | -8.615850e-47 |
| Msa1123720 | Msa1280150 | 0.802106 | 6.566778e-49 | -8.615850e-47 |
| Msa1143020 | Msa1280150 | 0.817743 | 2.814483e-52 | -8.615850e-47 |
| Msa1158390 | Msa1280150 | 0.802043 | 6.765202e-49 | -8.615850e-47 |
| Msa1162060 | Msa1280150 | 0.807278 | 5.464979e-50 | -8.615850e-47 |
| Msa1162780 | Msa1280150 | 0.800583 | 1.346641e-48 | -8.615850e-47 |
| Msa1177560 | Msa1280150 | 0.828118 | 1.073504e-54 | -8.615850e-47 |
| Msa1177780 | Msa1280150 | 0.817988 | 2.478114e-52 | -8.615850e-47 |
| Msa1182130 | Msa1280150 | 0.806895 | 6.586828e-50 | -8.615850e-47 |
| Msa1184780 | Msa1280150 | 0.817218 | 3.694870e-52 | -8.615850e-47 |
| Msa1184790 | Msa1280150 | 0.821573 | 3.758474e-53 | -8.615850e-47 |
| Msa1210110 | Msa1280150 | 0.802207 | 6.260268e-49 | -8.615850e-47 |
| Msa1221330 | Msa1280150 | 0.836904 | 7.117211e-57 | -8.615850e-47 |
| Msa0485490 | Msa1280150 | 0.815235 | 1.025538e-51 | -8.615850e-47 |
| Msa0500400 | Msa1280150 | 0.809183 | 2.145597e-50 | -8.615850e-47 |
| Msa0509670 | Msa1280150 | 0.810201 | 1.296453e-50 | -8.615850e-47 |
| Msa0517610 | Msa1280150 | 0.830780 | 2.422081e-55 | -8.615850e-47 |
| Msa0518170 | Msa1280150 | 0.814972 | 1.173147e-51 | -8.615850e-47 |
| Msa0521010 | Msa1280150 | 0.839969 | 1.152771e-57 | -8.615850e-47 |
| Msa0521670 | Msa1280150 | 0.836598 | 8.520777e-57 | -8.615850e-47 |
| Msa0524440 | Msa1280150 | 0.809208 | 2.119950e-50 | -8.615850e-47 |
| Msa0526070 | Msa1280150 | -0.808072 | 3.705742e-50 | -8.615850e-47 |
| Msa0534050 | Msa1280150 | 0.805414 | 1.350582e-49 | -8.615850e-47 |
| Msa0574600 | Msa1280150 | 0.832862 | 7.418884e-56 | -8.615850e-47 |
| Msa0574730 | Msa1280150 | 0.802131 | 6.489408e-49 | -8.615850e-47 |
| Msa0581400 | Msa1280150 | 0.807919 | 3.995517e-50 | -8.615850e-47 |
| Msa0599150 | Msa1280150 | 0.835562 | 1.560889e-56 | -8.615850e-47 |
| Msa0844110 | Msa1280150 | 0.801650 | 8.145150e-49 | -8.615850e-47 |
| Msa0853810 | Msa1280150 | 0.827179 | 1.805206e-54 | -8.615850e-47 |
| Msa0857300 | Msa1280150 | 0.801717 | 7.893590e-49 | -8.615850e-47 |
| Msa0863720 | Msa1280150 | 0.806843 | 6.755575e-50 | -8.615850e-47 |
| Msa0887960 | Msa1280150 | 0.800014 | 1.757932e-48 | -8.615850e-47 |
| Msa0894710 | Msa1280150 | 0.818640 | 1.763875e-52 | -8.615850e-47 |
| Msa0898320 | Msa1280150 | 0.856644 | 2.798786e-62 | -8.615850e-47 |
| Msa0902830 | Msa1280150 | 0.826297 | 2.931235e-54 | -8.615850e-47 |
| Msa0903780 | Msa1280150 | 0.805339 | 1.400305e-49 | -8.615850e-47 |
| Msa0919530 | Msa1280150 | 0.800174 | 1.631226e-48 | -8.615850e-47 |
| Msa0921420 | Msa1280150 | 0.829126 | 6.128047e-55 | -8.615850e-47 |
| Msa0939110 | Msa1280150 | 0.818414 | 1.984723e-52 | -8.615850e-47 |
| Msa0943190 | Msa1280150 | 0.815611 | 8.461201e-52 | -8.615850e-47 |
| Msa0960390 | Msa1280150 | 0.821586 | 3.732131e-53 | -8.615850e-47 |
| Msa0960740 | Msa1280150 | 0.807779 | 4.277569e-50 | -8.615850e-47 |
| Msa0965080 | Msa1280150 | 0.807226 | 5.605628e-50 | -8.615850e-47 |
| Msa0965290 | Msa1280150 | 0.806092 | 9.729628e-50 | -8.615850e-47 |
| Msa0968050 | Msa1280150 | 0.824351 | 8.459021e-54 | -8.615850e-47 |
| Msa0973070 | Msa1280150 | 0.809536 | 1.803050e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1280150 | MtrunA17_Chr8g0350211 | 96.648 | 179 | 6 | 0 | 1 | 179 | 1 | 179 | 3.41e-128 | 357 |
| Msa1280150 | MtrunA17_Chr8g0350191 | 90.503 | 179 | 17 | 0 | 1 | 179 | 1 | 179 | 6.73e-109 | 308 |
| Msa1280150 | MtrunA17_Chr8g0350201 | 89.944 | 179 | 18 | 0 | 1 | 179 | 1 | 179 | 2.57e-108 | 306 |
| Msa1280150 | MtrunA17_Chr7g0246561 | 54.396 | 182 | 63 | 5 | 1 | 178 | 1 | 166 | 1.63e-58 | 180 |
| Msa1280150 | MtrunA17_Chr8g0350271 | 38.043 | 184 | 96 | 6 | 2 | 175 | 5 | 180 | 7.21e-29 | 105 |
| Msa1280150 | MtrunA17_Chr8g0350231 | 36.517 | 178 | 97 | 4 | 2 | 169 | 5 | 176 | 2.38e-27 | 101 |
| Msa1280150 | MtrunA17_Chr8g0350221 | 35.870 | 184 | 100 | 6 | 2 | 175 | 5 | 180 | 4.71e-27 | 100 |
| Msa1280150 | MtrunA17_Chr8g0350241 | 36.066 | 183 | 100 | 6 | 2 | 175 | 5 | 179 | 2.64e-25 | 96.3 |
| Msa1280150 | MtrunA17_Chr8g0350291 | 34.973 | 183 | 102 | 6 | 2 | 175 | 5 | 179 | 5.40e-24 | 92.8 |
| Msa1280150 | MtrunA17_Chr3g0109941 | 34.973 | 183 | 102 | 7 | 2 | 175 | 5 | 179 | 7.95e-23 | 89.7 |
| Msa1280150 | MtrunA17_Chr8g0350281 | 32.749 | 171 | 105 | 5 | 2 | 171 | 7 | 168 | 4.65e-21 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1280150 | AT2G45760.1 | 35.294 | 204 | 101 | 5 | 1 | 177 | 6 | 205 | 4.58e-35 | 122 |
| Msa1280150 | AT3G61190.1 | 37.766 | 188 | 97 | 6 | 1 | 179 | 16 | 192 | 1.18e-29 | 108 |
| Msa1280150 | AT3G61190.2 | 37.766 | 188 | 97 | 6 | 1 | 179 | 16 | 192 | 1.18e-29 | 108 |
Find 41 sgRNAs with CRISPR-Local
Find 50 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACAATATCATATGTTTCTT+TGG | 0.263645 | 8_3:-18211339 | None:intergenic |
| ATAATAGAGTTAGGAGAAAT+GGG | 0.321912 | 8_3:+18211155 | Msa1280150:CDS |
| GATAATAGAGTTAGGAGAAA+TGG | 0.337385 | 8_3:+18211154 | Msa1280150:CDS |
| GTGAGTGGAGTTCCGGTAAC+CGG | 0.370119 | 8_3:+18211247 | Msa1280150:CDS |
| GTCGATGGTGAGTGGAGTTC+CGG | 0.410987 | 8_3:+18211240 | Msa1280150:CDS |
| TAACAGGAATTCCAGCTGTT+TGG | 0.411065 | 8_3:+18211308 | Msa1280150:CDS |
| TCATGTAGCGGAGTTGTAAC+AGG | 0.421560 | 8_3:+18211292 | Msa1280150:CDS |
| CACATACCCTCCAAGAAAAT+CGG | 0.422233 | 8_3:-18211092 | None:intergenic |
| AGTTCCGGTAACCGGGGTTC+CGG | 0.425765 | 8_3:+18211255 | Msa1280150:CDS |
| GTCACCGGAACCCCGGTTAC+CGG | 0.431972 | 8_3:-18211259 | None:intergenic |
| TCCGCTACATGAGCTATTAC+CGG | 0.458069 | 8_3:-18211281 | None:intergenic |
| TGTAGGGTAACTTCCGCCTT+CGG | 0.459071 | 8_3:-18210951 | None:intergenic |
| GGTTGTGGGATAATAGAGTT+AGG | 0.466052 | 8_3:+18211146 | Msa1280150:CDS |
| TGGTAGTTTAACCAAACAGC+TGG | 0.466544 | 8_3:-18211319 | None:intergenic |
| CCTCCAAGAAAATCGGAAAC+AGG | 0.468174 | 8_3:-18211085 | None:intergenic |
| CCAACTTCTCGTTCCATGTA+GGG | 0.474471 | 8_3:-18210967 | None:intergenic |
| GCCTTCGGAATCAAGTTTCG+TGG | 0.489360 | 8_3:-18210936 | None:intergenic |
| GGTAGTAGTAGCAATAGTGT+TGG | 0.506913 | 8_3:+18211049 | Msa1280150:CDS |
| GTAACCGGGGTTCCGGTGAC+CGG | 0.511262 | 8_3:+18211262 | Msa1280150:CDS |
| TGAGTGGAGTTCCGGTAACC+GGG | 0.516054 | 8_3:+18211248 | Msa1280150:CDS |
| GGTTGTAAATATTTCAGTAA+AGG | 0.518683 | 8_3:+18211177 | Msa1280150:CDS |
| ATGGAACGAGAAGTTGGTAA+TGG | 0.536894 | 8_3:+18210973 | Msa1280150:CDS |
| AAGGCGGAAGTTACCCTACA+TGG | 0.551053 | 8_3:+18210954 | Msa1280150:CDS |
| TAGTAGCAATAGTGTTGGAA+TGG | 0.552031 | 8_3:+18211054 | Msa1280150:CDS |
| TCCACTCACCATCGACGACA+TGG | 0.556286 | 8_3:-18211233 | None:intergenic |
| GTGATGAACCTTGCATGTAA+TGG | 0.558756 | 8_3:-18211001 | None:intergenic |
| CCCTACATGGAACGAGAAGT+TGG | 0.565961 | 8_3:+18210967 | Msa1280150:CDS |
| ACCAACTTCTCGTTCCATGT+AGG | 0.582262 | 8_3:-18210968 | None:intergenic |
| TCCATGTCGTCGATGGTGAG+TGG | 0.586254 | 8_3:+18211232 | Msa1280150:CDS |
| CATGAGCTATTACCGGTCAC+CGG | 0.597980 | 8_3:-18211274 | None:intergenic |
| GATGTGAAGTACAAAACAAG+AGG | 0.601532 | 8_3:+18211028 | Msa1280150:CDS |
| TTCGTCACGGTTCAATGTGA+CGG | 0.611637 | 8_3:+18210893 | Msa1280150:CDS |
| TGGATGTGCCATTACATGCA+AGG | 0.624126 | 8_3:+18210993 | Msa1280150:CDS |
| ACGAAACTTGATTCCGAAGG+CGG | 0.631770 | 8_3:+18210938 | Msa1280150:CDS |
| TAATAGAGTTAGGAGAAATG+GGG | 0.635926 | 8_3:+18211156 | Msa1280150:CDS |
| ACCACGAAACTTGATTCCGA+AGG | 0.642396 | 8_3:+18210935 | Msa1280150:CDS |
| ATTACCGGTCACCGGAACCC+CGG | 0.657610 | 8_3:-18211266 | None:intergenic |
| ACCGGTAATAGCTCATGTAG+CGG | 0.660755 | 8_3:+18211280 | Msa1280150:CDS |
| GAGTGGAGTTCCGGTAACCG+GGG | 0.677190 | 8_3:+18211249 | Msa1280150:CDS |
| AAAAGGGAACACATTCGTCA+CGG | 0.677311 | 8_3:+18210880 | Msa1280150:CDS |
| TCAATGTGACGGAAGCAATG+AGG | 0.684521 | 8_3:+18210904 | Msa1280150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTGCAATTTTTAAGTTAT+AGG | + | chr8_3:18211125-18211144 | Msa1280150:CDS | 15.0% |
| !! | AGAATAAAAAAGCCATAAAA+GGG | + | chr8_3:18210864-18210883 | Msa1280150:CDS | 20.0% |
| !!! | AATTTTTAAGTTATAGGTTG+TGG | + | chr8_3:18211131-18211150 | Msa1280150:CDS | 20.0% |
| !!! | ATTTTTAAGTTATAGGTTGT+GGG | + | chr8_3:18211132-18211151 | Msa1280150:CDS | 20.0% |
| ! | GAGAATAAAAAAGCCATAAA+AGG | + | chr8_3:18210863-18210882 | Msa1280150:CDS | 25.0% |
| ! | ATAATAGAGTTAGGAGAAAT+GGG | + | chr8_3:18211155-18211174 | Msa1280150:CDS | 25.0% |
| ! | GGTTGTAAATATTTCAGTAA+AGG | + | chr8_3:18211177-18211196 | Msa1280150:CDS | 25.0% |
| GATAATAGAGTTAGGAGAAA+TGG | + | chr8_3:18211154-18211173 | Msa1280150:CDS | 30.0% | |
| TAATAGAGTTAGGAGAAATG+GGG | + | chr8_3:18211156-18211175 | Msa1280150:CDS | 30.0% | |
| GATGTGAAGTACAAAACAAG+AGG | + | chr8_3:18211028-18211047 | Msa1280150:CDS | 35.0% | |
| ! | TAGTAGCAATAGTGTTGGAA+TGG | + | chr8_3:18211054-18211073 | Msa1280150:CDS | 35.0% |
| ! | GACGAATGTGTTCCCTTTTA+TGG | - | chr8_3:18210879-18210898 | None:intergenic | 40.0% |
| AAAAGGGAACACATTCGTCA+CGG | + | chr8_3:18210880-18210899 | Msa1280150:CDS | 40.0% | |
| !! | ATGGAACGAGAAGTTGGTAA+TGG | + | chr8_3:18210973-18210992 | Msa1280150:CDS | 40.0% |
| GTGATGAACCTTGCATGTAA+TGG | - | chr8_3:18211004-18211023 | None:intergenic | 40.0% | |
| GGTAGTAGTAGCAATAGTGT+TGG | + | chr8_3:18211049-18211068 | Msa1280150:CDS | 40.0% | |
| ! | GTACCTGTTTCCGATTTTCT+TGG | + | chr8_3:18211082-18211101 | Msa1280150:CDS | 40.0% |
| ! | CTGTTTCCGATTTTCTTGGA+GGG | + | chr8_3:18211086-18211105 | Msa1280150:CDS | 40.0% |
| CACATACCCTCCAAGAAAAT+CGG | - | chr8_3:18211095-18211114 | None:intergenic | 40.0% | |
| GGTTGTGGGATAATAGAGTT+AGG | + | chr8_3:18211146-18211165 | Msa1280150:CDS | 40.0% | |
| TAACAGGAATTCCAGCTGTT+TGG | + | chr8_3:18211308-18211327 | Msa1280150:CDS | 40.0% | |
| TGGTAGTTTAACCAAACAGC+TGG | - | chr8_3:18211322-18211341 | None:intergenic | 40.0% | |
| TTCGTCACGGTTCAATGTGA+CGG | + | chr8_3:18210893-18210912 | Msa1280150:CDS | 45.0% | |
| ! | TCAATGTGACGGAAGCAATG+AGG | + | chr8_3:18210904-18210923 | Msa1280150:CDS | 45.0% |
| ACCACGAAACTTGATTCCGA+AGG | + | chr8_3:18210935-18210954 | Msa1280150:CDS | 45.0% | |
| ACGAAACTTGATTCCGAAGG+CGG | + | chr8_3:18210938-18210957 | Msa1280150:CDS | 45.0% | |
| CCAACTTCTCGTTCCATGTA+GGG | - | chr8_3:18210970-18210989 | None:intergenic | 45.0% | |
| ACCAACTTCTCGTTCCATGT+AGG | - | chr8_3:18210971-18210990 | None:intergenic | 45.0% | |
| ! | TGGATGTGCCATTACATGCA+AGG | + | chr8_3:18210993-18211012 | Msa1280150:CDS | 45.0% |
| CCTCCAAGAAAATCGGAAAC+AGG | - | chr8_3:18211088-18211107 | None:intergenic | 45.0% | |
| ! | CCTGTTTCCGATTTTCTTGG+AGG | + | chr8_3:18211085-18211104 | Msa1280150:CDS | 45.0% |
| ACCGGTAATAGCTCATGTAG+CGG | + | chr8_3:18211280-18211299 | Msa1280150:CDS | 45.0% | |
| TCCGCTACATGAGCTATTAC+CGG | - | chr8_3:18211284-18211303 | None:intergenic | 45.0% | |
| ! | TCATGTAGCGGAGTTGTAAC+AGG | + | chr8_3:18211292-18211311 | Msa1280150:CDS | 45.0% |
| GCCTTCGGAATCAAGTTTCG+TGG | - | chr8_3:18210939-18210958 | None:intergenic | 50.0% | |
| TGTAGGGTAACTTCCGCCTT+CGG | - | chr8_3:18210954-18210973 | None:intergenic | 50.0% | |
| AAGGCGGAAGTTACCCTACA+TGG | + | chr8_3:18210954-18210973 | Msa1280150:CDS | 50.0% | |
| CCCTACATGGAACGAGAAGT+TGG | + | chr8_3:18210967-18210986 | Msa1280150:CDS | 50.0% | |
| CATGAGCTATTACCGGTCAC+CGG | - | chr8_3:18211277-18211296 | None:intergenic | 50.0% | |
| CTCGAGTTCCATGTCGTCGA+TGG | + | chr8_3:18211225-18211244 | Msa1280150:CDS | 55.0% | |
| TCCATGTCGTCGATGGTGAG+TGG | + | chr8_3:18211232-18211251 | Msa1280150:CDS | 55.0% | |
| TCCACTCACCATCGACGACA+TGG | - | chr8_3:18211236-18211255 | None:intergenic | 55.0% | |
| GTCGATGGTGAGTGGAGTTC+CGG | + | chr8_3:18211240-18211259 | Msa1280150:CDS | 55.0% | |
| GTGAGTGGAGTTCCGGTAAC+CGG | + | chr8_3:18211247-18211266 | Msa1280150:CDS | 55.0% | |
| TGAGTGGAGTTCCGGTAACC+GGG | + | chr8_3:18211248-18211267 | Msa1280150:CDS | 55.0% | |
| GAGTGGAGTTCCGGTAACCG+GGG | + | chr8_3:18211249-18211268 | Msa1280150:CDS | 60.0% | |
| AGTTCCGGTAACCGGGGTTC+CGG | + | chr8_3:18211255-18211274 | Msa1280150:CDS | 60.0% | |
| ATTACCGGTCACCGGAACCC+CGG | - | chr8_3:18211269-18211288 | None:intergenic | 60.0% | |
| GTCACCGGAACCCCGGTTAC+CGG | - | chr8_3:18211262-18211281 | None:intergenic | 65.0% | |
| GTAACCGGGGTTCCGGTGAC+CGG | + | chr8_3:18211262-18211281 | Msa1280150:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 18210815 | 18211354 | 18210815 | ID=Msa1280150;Name=Msa1280150 |
| chr8_3 | mRNA | 18210815 | 18211354 | 18210815 | ID=Msa1280150-mRNA-1;Parent=Msa1280150;Name=Msa1280150-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|-1|0|1|-1|1|1|0|179 |
| chr8_3 | exon | 18210815 | 18211354 | 18210815 | ID=Msa1280150-mRNA-1:exon:6912;Parent=Msa1280150-mRNA-1 |
| chr8_3 | CDS | 18210815 | 18211354 | 18210815 | ID=Msa1280150-mRNA-1:cds;Parent=Msa1280150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
