Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0888320 | KAF9664218.1 | 30.526 | 380 | 151 | 11 | 162 | 468 | 485 | 824 | 4.51e-28 | 130 |
| Msa0888320 | KAF9664218.1 | 33.657 | 309 | 120 | 9 | 47 | 341 | 138 | 375 | 2.45e-25 | 122 |
| Msa0888320 | KAF9664218.1 | 34.024 | 338 | 129 | 10 | 34 | 298 | 463 | 779 | 3.96e-29 | 133 |
| Msa0888320 | KAF9664218.1 | 34.252 | 254 | 74 | 6 | 23 | 239 | 178 | 375 | 9.75e-17 | 95.9 |
| Msa0888320 | KAF9664218.1 | 35.252 | 417 | 150 | 13 | 31 | 400 | 3 | 346 | 7.83e-52 | 199 |
| Msa0888320 | KAF9664218.1 | 37.755 | 196 | 69 | 7 | 257 | 415 | 25 | 204 | 1.57e-19 | 104 |
| Msa0888320 | KAF9664218.1 | 38.571 | 210 | 89 | 5 | 27 | 196 | 570 | 779 | 8.14e-26 | 123 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0888320 | sp|O03982|HIP39_ARATH | 53.623 | 69 | 27 | 2 | 31 | 94 | 3 | 71 | 2.00e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0888320 | A0A6N2NAF2 | 33.710 | 531 | 184 | 17 | 28 | 459 | 126 | 587 | 1.14e-58 | 216 |
| Msa0888320 | A0A6N2NAF2 | 34.910 | 444 | 141 | 13 | 28 | 400 | 360 | 726 | 1.79e-48 | 188 |
| Msa0888320 | A0A6N2NAF2 | 35.043 | 468 | 154 | 14 | 28 | 398 | 245 | 659 | 5.87e-54 | 203 |
| Msa0888320 | A0A6N2NAF2 | 36.306 | 471 | 156 | 16 | 31 | 400 | 3 | 430 | 3.00e-63 | 229 |
| Msa0888320 | A0A6N2NAF2 | 36.859 | 312 | 100 | 8 | 27 | 298 | 472 | 726 | 1.16e-37 | 157 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004860 | Msa0888320 | 0.805195 | 1.501088e-49 | -8.615850e-47 |
| Msa0004920 | Msa0888320 | 0.826358 | 2.834113e-54 | -8.615850e-47 |
| Msa0051770 | Msa0888320 | 0.820547 | 6.475665e-53 | -8.615850e-47 |
| Msa0110970 | Msa0888320 | 0.811420 | 7.062928e-51 | -8.615850e-47 |
| Msa0623700 | Msa0888320 | 0.801861 | 7.371861e-49 | -8.615850e-47 |
| Msa0643220 | Msa0888320 | 0.801890 | 7.273940e-49 | -8.615850e-47 |
| Msa0682900 | Msa0888320 | 0.813723 | 2.215852e-51 | -8.615850e-47 |
| Msa0708520 | Msa0888320 | 0.811735 | 6.033611e-51 | -8.615850e-47 |
| Msa0709500 | Msa0888320 | 0.801272 | 9.738127e-49 | -8.615850e-47 |
| Msa0724830 | Msa0888320 | 0.810475 | 1.131515e-50 | -8.615850e-47 |
| Msa0754720 | Msa0888320 | -0.800807 | 1.211971e-48 | -8.615850e-47 |
| Msa0760380 | Msa0888320 | 0.827576 | 1.449704e-54 | -8.615850e-47 |
| Msa0787750 | Msa0888320 | 0.824668 | 7.124922e-54 | -8.615850e-47 |
| Msa0790850 | Msa0888320 | 0.803235 | 3.839510e-49 | -8.615850e-47 |
| Msa0124340 | Msa0888320 | 0.835747 | 1.401201e-56 | -8.615850e-47 |
| Msa0172350 | Msa0888320 | 0.803797 | 2.936869e-49 | -8.615850e-47 |
| Msa0185480 | Msa0888320 | 0.804390 | 2.210340e-49 | -8.615850e-47 |
| Msa0372660 | Msa0888320 | 0.812901 | 3.356796e-51 | -8.615850e-47 |
| Msa0372670 | Msa0888320 | 0.809448 | 1.882444e-50 | -8.615850e-47 |
| Msa0393680 | Msa0888320 | 0.805417 | 1.348321e-49 | -8.615850e-47 |
| Msa0402330 | Msa0888320 | 0.802949 | 4.399939e-49 | -8.615850e-47 |
| Msa0423040 | Msa0888320 | 0.801485 | 8.807985e-49 | -8.615850e-47 |
| Msa0423360 | Msa0888320 | -0.801782 | 7.655048e-49 | -8.615850e-47 |
| Msa0242680 | Msa0888320 | 0.806600 | 7.602332e-50 | -8.615850e-47 |
| Msa0267760 | Msa0888320 | 0.804680 | 1.922858e-49 | -8.615850e-47 |
| Msa0298120 | Msa0888320 | 0.803010 | 4.274632e-49 | -8.615850e-47 |
| Msa0311860 | Msa0888320 | 0.800304 | 1.534603e-48 | -8.615850e-47 |
| Msa0359560 | Msa0888320 | 0.800070 | 1.712384e-48 | -8.615850e-47 |
| Msa0547360 | Msa0888320 | 0.817203 | 3.724287e-52 | -8.615850e-47 |
| Msa0863870 | Msa0888320 | 0.817811 | 2.716969e-52 | -8.615850e-47 |
| Msa0888320 | Msa0914650 | 0.808620 | 2.832489e-50 | -8.615850e-47 |
| Msa0888320 | Msa0944770 | 0.807306 | 5.391632e-50 | -8.615850e-47 |
| Msa0888320 | Msa1111110 | 0.803045 | 4.205089e-49 | -8.615850e-47 |
| Msa0888320 | Msa1125760 | 0.808411 | 3.138962e-50 | -8.615850e-47 |
| Msa0888320 | Msa1165870 | 0.805566 | 1.254705e-49 | -8.615850e-47 |
| Msa0888320 | Msa1171360 | 0.800643 | 1.309056e-48 | -8.615850e-47 |
| Msa0888320 | Msa1217660 | 0.801203 | 1.005942e-48 | -8.615850e-47 |
| Msa0888320 | Msa1228210 | 0.804515 | 2.082133e-49 | -8.615850e-47 |
| Msa0888320 | Msa1254510 | 0.807809 | 4.215907e-50 | -8.615850e-47 |
| Msa0888320 | Msa1271300 | 0.803294 | 3.734707e-49 | -8.615850e-47 |
| Msa0888320 | Msa1343820 | 0.826791 | 2.234836e-54 | -8.615850e-47 |
| Msa0888320 | Msa1397050 | 0.816706 | 4.816647e-52 | -8.615850e-47 |
| Msa0888320 | Msa1397810 | 0.803380 | 3.583500e-49 | -8.615850e-47 |
| Msa0888320 | Msa1423450 | 0.806517 | 7.916365e-50 | -8.615850e-47 |
| Msa0888320 | Msa1427760 | 0.801329 | 9.478734e-49 | -8.615850e-47 |
| Msa0888320 | Msa1460470 | 0.837524 | 4.941230e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0888320 | MtrunA17_Chr6g0469681 | 69.531 | 128 | 24 | 2 | 30 | 153 | 2 | 118 | 1.37e-41 | 144 |
| Msa0888320 | MtrunA17_Chr6g0469681 | 62.931 | 116 | 27 | 3 | 358 | 469 | 24 | 127 | 3.79e-30 | 114 |
| Msa0888320 | MtrunA17_Chr6g0469681 | 62.264 | 106 | 25 | 2 | 154 | 255 | 24 | 118 | 2.30e-25 | 100 |
| Msa0888320 | MtrunA17_Chr6g0469681 | 62.264 | 106 | 25 | 2 | 256 | 357 | 24 | 118 | 2.30e-25 | 100 |
| Msa0888320 | MtrunA17_Chr6g0469651 | 69.291 | 127 | 30 | 2 | 31 | 153 | 3 | 124 | 4.97e-35 | 127 |
| Msa0888320 | MtrunA17_Chr6g0469651 | 62.069 | 116 | 34 | 3 | 358 | 469 | 24 | 133 | 8.11e-24 | 96.7 |
| Msa0888320 | MtrunA17_Chr6g0469651 | 61.321 | 106 | 32 | 2 | 154 | 255 | 24 | 124 | 4.25e-19 | 83.6 |
| Msa0888320 | MtrunA17_Chr6g0469651 | 61.321 | 106 | 32 | 2 | 256 | 357 | 24 | 124 | 4.25e-19 | 83.6 |
| Msa0888320 | MtrunA17_Chr6g0469671 | 66.087 | 115 | 26 | 2 | 30 | 140 | 2 | 107 | 4.12e-30 | 113 |
| Msa0888320 | MtrunA17_Chr6g0469671 | 56.989 | 93 | 27 | 2 | 154 | 242 | 24 | 107 | 1.82e-14 | 69.3 |
| Msa0888320 | MtrunA17_Chr6g0469671 | 56.989 | 93 | 27 | 2 | 256 | 344 | 24 | 107 | 1.82e-14 | 69.3 |
| Msa0888320 | MtrunA17_Chr6g0469671 | 56.989 | 93 | 27 | 2 | 358 | 446 | 24 | 107 | 1.82e-14 | 69.3 |
| Msa0888320 | MtrunA17_Chr6g0469571 | 55.906 | 127 | 35 | 5 | 31 | 153 | 3 | 112 | 4.64e-26 | 102 |
| Msa0888320 | MtrunA17_Chr6g0469571 | 44.444 | 117 | 44 | 4 | 358 | 469 | 24 | 124 | 4.45e-16 | 74.7 |
| Msa0888320 | MtrunA17_Chr6g0469571 | 47.170 | 106 | 35 | 5 | 154 | 255 | 24 | 112 | 1.37e-11 | 61.6 |
| Msa0888320 | MtrunA17_Chr6g0469571 | 47.170 | 106 | 35 | 5 | 256 | 357 | 24 | 112 | 1.37e-11 | 61.6 |
| Msa0888320 | MtrunA17_Chr6g0469551 | 55.906 | 127 | 35 | 5 | 31 | 153 | 3 | 112 | 6.02e-26 | 102 |
| Msa0888320 | MtrunA17_Chr6g0469551 | 44.444 | 117 | 44 | 4 | 358 | 469 | 24 | 124 | 5.91e-16 | 74.3 |
| Msa0888320 | MtrunA17_Chr6g0469551 | 47.170 | 106 | 35 | 5 | 154 | 255 | 24 | 112 | 1.57e-11 | 61.6 |
| Msa0888320 | MtrunA17_Chr6g0469551 | 47.170 | 106 | 35 | 5 | 256 | 357 | 24 | 112 | 1.57e-11 | 61.6 |
| Msa0888320 | MtrunA17_Chr6g0469591 | 55.906 | 127 | 35 | 5 | 31 | 153 | 3 | 112 | 1.13e-25 | 101 |
| Msa0888320 | MtrunA17_Chr6g0469591 | 44.068 | 118 | 43 | 5 | 358 | 469 | 24 | 124 | 5.07e-15 | 71.6 |
| Msa0888320 | MtrunA17_Chr1g0202541 | 54.688 | 128 | 50 | 2 | 31 | 154 | 3 | 126 | 2.84e-25 | 100 |
| Msa0888320 | MtrunA17_Chr1g0202541 | 50.000 | 116 | 49 | 3 | 358 | 468 | 24 | 135 | 3.90e-16 | 75.1 |
| Msa0888320 | MtrunA17_Chr1g0202541 | 50.467 | 107 | 45 | 2 | 154 | 256 | 24 | 126 | 2.64e-14 | 69.7 |
| Msa0888320 | MtrunA17_Chr1g0202541 | 50.467 | 107 | 45 | 2 | 256 | 358 | 24 | 126 | 2.64e-14 | 69.7 |
| Msa0888320 | MtrunA17_Chr7g0233181 | 60.000 | 80 | 28 | 1 | 31 | 106 | 3 | 82 | 5.70e-25 | 99.0 |
| Msa0888320 | MtrunA17_Chr7g0233181 | 51.852 | 54 | 22 | 1 | 159 | 208 | 29 | 82 | 8.83e-11 | 58.9 |
| Msa0888320 | MtrunA17_Chr7g0233181 | 51.852 | 54 | 22 | 1 | 261 | 310 | 29 | 82 | 8.83e-11 | 58.9 |
| Msa0888320 | MtrunA17_Chr7g0233181 | 51.852 | 54 | 22 | 1 | 363 | 412 | 29 | 82 | 8.83e-11 | 58.9 |
| Msa0888320 | MtrunA17_Chr7g0233251 | 61.250 | 80 | 27 | 1 | 31 | 106 | 3 | 82 | 7.36e-25 | 99.0 |
| Msa0888320 | MtrunA17_Chr7g0233251 | 55.556 | 54 | 20 | 1 | 159 | 208 | 29 | 82 | 1.84e-11 | 61.2 |
| Msa0888320 | MtrunA17_Chr7g0233251 | 55.556 | 54 | 20 | 1 | 261 | 310 | 29 | 82 | 1.84e-11 | 61.2 |
| Msa0888320 | MtrunA17_Chr7g0233251 | 55.556 | 54 | 20 | 1 | 363 | 412 | 29 | 82 | 1.84e-11 | 61.2 |
| Msa0888320 | MtrunA17_Chr1g0202561 | 55.200 | 125 | 50 | 2 | 31 | 151 | 3 | 125 | 6.11e-24 | 97.1 |
| Msa0888320 | MtrunA17_Chr1g0202561 | 47.863 | 117 | 53 | 3 | 358 | 468 | 24 | 138 | 5.38e-14 | 68.9 |
| Msa0888320 | MtrunA17_Chr1g0202561 | 50.000 | 104 | 46 | 2 | 154 | 253 | 24 | 125 | 2.48e-12 | 64.3 |
| Msa0888320 | MtrunA17_Chr1g0202561 | 50.000 | 104 | 46 | 2 | 256 | 355 | 24 | 125 | 2.48e-12 | 64.3 |
| Msa0888320 | MtrunA17_Chr6g0469541 | 43.307 | 127 | 43 | 3 | 31 | 149 | 3 | 108 | 1.60e-23 | 95.1 |
| Msa0888320 | MtrunA17_Chr7g0233191 | 56.250 | 80 | 31 | 1 | 31 | 106 | 3 | 82 | 1.52e-22 | 92.4 |
| Msa0888320 | MtrunA17_Chr7g0233191 | 49.153 | 59 | 26 | 1 | 154 | 208 | 24 | 82 | 3.01e-11 | 60.5 |
| Msa0888320 | MtrunA17_Chr7g0233191 | 49.153 | 59 | 26 | 1 | 256 | 310 | 24 | 82 | 3.01e-11 | 60.5 |
| Msa0888320 | MtrunA17_Chr7g0233191 | 49.153 | 59 | 26 | 1 | 358 | 412 | 24 | 82 | 3.01e-11 | 60.5 |
| Msa0888320 | MtrunA17_Chr1g0202501 | 49.219 | 128 | 53 | 2 | 30 | 153 | 2 | 121 | 1.71e-22 | 92.8 |
| Msa0888320 | MtrunA17_Chr1g0202501 | 45.946 | 111 | 47 | 3 | 363 | 469 | 29 | 130 | 1.68e-13 | 67.4 |
| Msa0888320 | MtrunA17_Chr8g0387471 | 41.860 | 129 | 56 | 4 | 31 | 153 | 3 | 118 | 4.64e-22 | 91.7 |
| Msa0888320 | MtrunA17_Chr8g0387471 | 40.984 | 122 | 51 | 6 | 354 | 469 | 21 | 127 | 8.28e-13 | 65.5 |
| Msa0888320 | MtrunA17_Chr7g0233201 | 55.000 | 80 | 32 | 1 | 31 | 106 | 3 | 82 | 5.09e-22 | 90.9 |
| Msa0888320 | MtrunA17_Chr7g0233231 | 41.270 | 126 | 52 | 2 | 31 | 152 | 3 | 110 | 5.62e-22 | 90.9 |
| Msa0888320 | MtrunA17_Chr7g0233211 | 55.000 | 80 | 32 | 1 | 31 | 106 | 3 | 82 | 7.20e-22 | 90.5 |
| Msa0888320 | MtrunA17_Chr1g0202581 | 67.143 | 70 | 18 | 2 | 31 | 96 | 3 | 71 | 1.13e-21 | 90.5 |
| Msa0888320 | MtrunA17_Chr1g0202581 | 49.565 | 115 | 47 | 6 | 358 | 468 | 24 | 131 | 7.14e-11 | 60.1 |
| Msa0888320 | MtrunA17_Chr1g0204291 | 64.706 | 68 | 19 | 2 | 31 | 94 | 3 | 69 | 3.54e-21 | 89.4 |
| Msa0888320 | MtrunA17_Chr7g0248671 | 54.545 | 66 | 26 | 1 | 31 | 92 | 3 | 68 | 1.51e-15 | 74.3 |
| Msa0888320 | MtrunA17_Chr8g0348361 | 59.574 | 47 | 15 | 1 | 50 | 92 | 22 | 68 | 6.48e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0888320 | AT1G01490.1 | 53.623 | 69 | 27 | 2 | 31 | 94 | 3 | 71 | 2.03e-15 | 74.7 |
| Msa0888320 | AT1G01490.2 | 53.623 | 69 | 27 | 2 | 31 | 94 | 3 | 71 | 2.03e-15 | 74.7 |
| Msa0888320 | AT1G01490.4 | 53.623 | 69 | 27 | 2 | 31 | 94 | 30 | 98 | 3.90e-15 | 74.7 |
Find 67 sgRNAs with CRISPR-Local
Find 641 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGGAGGAGCCAAAGAAAA+AGG | 0.237298 | 6_1:+52628776 | Msa0888320:CDS |
| GAAGGAGGAGCCAAAGAAAA+AGG | 0.237298 | 6_1:+52631037 | Msa0888320:CDS |
| GAAGGAGGAGCCAAAGAAAA+AGG | 0.237298 | 6_1:+52633299 | Msa0888320:CDS |
| GAAGGAGGAGCCAAAGAAAA+AGG | 0.237298 | 6_1:+52635560 | Msa0888320:CDS |
| GATAAGAAAATGACAATAAT+TGG | 0.247507 | 6_1:+52628021 | Msa0888320:CDS |
| GATAAGAAAATGACAATAAT+TGG | 0.247507 | 6_1:+52630260 | Msa0888320:CDS |
| GATAAGAAAATGACAATAAT+TGG | 0.247507 | 6_1:+52632522 | Msa0888320:CDS |
| GATAAGAAAATGACAATAAT+TGG | 0.247507 | 6_1:+52634783 | Msa0888320:CDS |
| ATGACAGAAACTAGTGTTAA+AGG | 0.285053 | 6_1:+52627522 | Msa0888320:intron |
| AAGACGGCCCTGACATTAAC+AGG | 0.306446 | 6_1:-52628054 | None:intergenic |
| AAGACGGCCCTGACATTAAC+AGG | 0.306446 | 6_1:-52630293 | None:intergenic |
| AAGACGGCCCTGACATTAAC+AGG | 0.306446 | 6_1:-52632555 | None:intergenic |
| AAGACGGCCCTGACATTAAC+AGG | 0.306446 | 6_1:-52634816 | None:intergenic |
| AGGGGTTGAGGCTGTTTCAT+TGG | 0.357258 | 6_1:+52627990 | Msa0888320:intron |
| AGGGGTTGAGGCTGTTTCAT+TGG | 0.357258 | 6_1:+52630229 | Msa0888320:intron |
| AGGGGTTGAGGCTGTTTCAT+TGG | 0.357258 | 6_1:+52632491 | Msa0888320:intron |
| AGGGGTTGAGGCTGTTTCAT+TGG | 0.357258 | 6_1:+52634752 | Msa0888320:intron |
| AAAGGACACAAAAGATGAAT+TGG | 0.372542 | 6_1:+52628794 | Msa0888320:CDS |
| AAAGGACACAAAAGATGAAT+TGG | 0.372542 | 6_1:+52631055 | Msa0888320:CDS |
| AAAGGACACAAAAGATGAAT+TGG | 0.372542 | 6_1:+52633317 | Msa0888320:CDS |
| AAAGGACACAAAAGATGAAT+TGG | 0.372542 | 6_1:+52635578 | Msa0888320:CDS |
| GAGACCAGATACCGTCTTCA+TGG | 0.381713 | 6_1:-52627578 | None:intergenic |
| CTGTAATAGTGATAAGGATA+TGG | 0.401244 | 6_1:-52628864 | None:intergenic |
| CTGTAATAGTGATAAGGATA+TGG | 0.401244 | 6_1:-52631125 | None:intergenic |
| CTGTAATAGTGATAAGGATA+TGG | 0.401244 | 6_1:-52633387 | None:intergenic |
| CTGTAATAGTGATAAGGATA+TGG | 0.401244 | 6_1:-52635648 | None:intergenic |
| AAAGCCATGAAGACGGTATC+TGG | 0.405974 | 6_1:+52627574 | Msa0888320:CDS |
| CATAGGACAAGGAGGTTGTA+GGG | 0.441748 | 6_1:-52626109 | None:intergenic |
| GGCTGTTTCATTGGACATGA+AGG | 0.455853 | 6_1:+52627999 | Msa0888320:CDS |
| GGCTGTTTCATTGGACATGA+AGG | 0.455853 | 6_1:+52630238 | Msa0888320:CDS |
| GGCTGTTTCATTGGACATGA+AGG | 0.455853 | 6_1:+52632500 | Msa0888320:CDS |
| GGCTGTTTCATTGGACATGA+AGG | 0.455853 | 6_1:+52634761 | Msa0888320:CDS |
| CATGCTGAAATAATTGCAAT+TGG | 0.461465 | 6_1:+52628690 | Msa0888320:CDS |
| CATGCTGAAATAATTGCAAT+TGG | 0.461465 | 6_1:+52630951 | Msa0888320:CDS |
| CATGCTGAAATAATTGCAAT+TGG | 0.461465 | 6_1:+52633213 | Msa0888320:CDS |
| CATGCTGAAATAATTGCAAT+TGG | 0.461465 | 6_1:+52635474 | Msa0888320:CDS |
| TAAATGAAATGGTTGATTTG+TGG | 0.468091 | 6_1:+52626075 | Msa0888320:CDS |
| ACATAGGACAAGGAGGTTGT+AGG | 0.476519 | 6_1:-52626110 | None:intergenic |
| ACAGATCTGTAATAGTGATA+AGG | 0.494122 | 6_1:-52628870 | None:intergenic |
| ACAGATCTGTAATAGTGATA+AGG | 0.494122 | 6_1:-52631131 | None:intergenic |
| ACAGATCTGTAATAGTGATA+AGG | 0.494122 | 6_1:-52633393 | None:intergenic |
| ACAGATCTGTAATAGTGATA+AGG | 0.494122 | 6_1:-52635654 | None:intergenic |
| TATTACAGATCTGTGGAAGC+AGG | 0.499029 | 6_1:+52628879 | Msa0888320:CDS |
| TATTACAGATCTGTGGAAGC+AGG | 0.499029 | 6_1:+52631140 | Msa0888320:CDS |
| TATTACAGATCTGTGGAAGC+AGG | 0.499029 | 6_1:+52633402 | Msa0888320:CDS |
| TATTACAGATCTGTGGAAGC+AGG | 0.499029 | 6_1:+52635663 | Msa0888320:CDS |
| TGAATTGGCTGATCTTATGA+AGG | 0.506423 | 6_1:+52628809 | Msa0888320:CDS |
| TGAATTGGCTGATCTTATGA+AGG | 0.506423 | 6_1:+52631070 | Msa0888320:CDS |
| TGAATTGGCTGATCTTATGA+AGG | 0.506423 | 6_1:+52633332 | Msa0888320:CDS |
| TGAATTGGCTGATCTTATGA+AGG | 0.506423 | 6_1:+52635593 | Msa0888320:CDS |
| AAGACGGTATCTGGTCTCTC+AGG | 0.510958 | 6_1:+52627583 | Msa0888320:CDS |
| TACTTTCAAAAGTGATCCCA+TGG | 0.512050 | 6_1:-52626054 | None:intergenic |
| AACACTTTCATGTTGAACAT+AGG | 0.551182 | 6_1:-52626126 | None:intergenic |
| TGGAAGCAGGGTCTCCAAGT+GGG | 0.577605 | 6_1:+52635676 | Msa0888320:CDS |
| TAACAAATAGCACACCCACT+TGG | 0.584271 | 6_1:-52635690 | None:intergenic |
| ATTACAGATCTGTGGAAGCA+GGG | 0.595048 | 6_1:+52628880 | Msa0888320:CDS |
| ATTACAGATCTGTGGAAGCA+GGG | 0.595048 | 6_1:+52631141 | Msa0888320:CDS |
| ATTACAGATCTGTGGAAGCA+GGG | 0.595048 | 6_1:+52633403 | Msa0888320:CDS |
| ATTACAGATCTGTGGAAGCA+GGG | 0.595048 | 6_1:+52635664 | Msa0888320:CDS |
| TTATCACTATTACAGATCTG+TGG | 0.623872 | 6_1:+52628872 | Msa0888320:CDS |
| TTATCACTATTACAGATCTG+TGG | 0.623872 | 6_1:+52631133 | Msa0888320:CDS |
| TTATCACTATTACAGATCTG+TGG | 0.623872 | 6_1:+52633395 | Msa0888320:CDS |
| TTATCACTATTACAGATCTG+TGG | 0.623872 | 6_1:+52635656 | Msa0888320:CDS |
| ATAGGACAAGGAGGTTGTAG+GGG | 0.645055 | 6_1:-52626108 | None:intergenic |
| GTGGAAGCAGGGTCTCCAAG+TGG | 0.664293 | 6_1:+52635675 | Msa0888320:CDS |
| TTCATGTTGAACATAGGACA+AGG | 0.679708 | 6_1:-52626120 | None:intergenic |
| ATGTTGAACATAGGACAAGG+AGG | 0.685336 | 6_1:-52626117 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTAAAATATTTATA+AGG | - | chr6_1:52628570-52628589 | None:intergenic | 0.0% |
| !!! | TAAATATTTTAAAAAAAAAT+TGG | + | chr6_1:52628572-52628591 | Msa0888320:intron | 0.0% |
| !!! | AAATATTTTAAAAAAAAATT+GGG | + | chr6_1:52628573-52628592 | Msa0888320:intron | 0.0% |
| !!! | TTTTTTTTAAAATATTTATA+AGG | - | chr6_1:52628570-52628589 | None:intergenic | 0.0% |
| !!! | TAAATATTTTAAAAAAAAAT+TGG | + | chr6_1:52628572-52628591 | Msa0888320:intron | 0.0% |
| !!! | AAATATTTTAAAAAAAAATT+GGG | + | chr6_1:52628573-52628592 | Msa0888320:intron | 0.0% |
| !!! | TTTTTTTTAAAATATTTATA+AGG | - | chr6_1:52628570-52628589 | None:intergenic | 0.0% |
| !!! | TAAATATTTTAAAAAAAAAT+TGG | + | chr6_1:52628572-52628591 | Msa0888320:intron | 0.0% |
| !!! | AAATATTTTAAAAAAAAATT+GGG | + | chr6_1:52628573-52628592 | Msa0888320:intron | 0.0% |
| !!! | TTTTTTTTAAAATATTTATA+AGG | - | chr6_1:52628570-52628589 | None:intergenic | 0.0% |
| !!! | TAAATATTTTAAAAAAAAAT+TGG | + | chr6_1:52628572-52628591 | Msa0888320:intron | 0.0% |
| !!! | AAATATTTTAAAAAAAAATT+GGG | + | chr6_1:52628573-52628592 | Msa0888320:intron | 0.0% |
| !! | GACAAAAAAATAATAAAAAA+AGG | + | chr6_1:52626645-52626664 | Msa0888320:intron | 10.0% |
| !! | GAAATTCAAAAATAAATTAA+GGG | - | chr6_1:52626689-52626708 | None:intergenic | 10.0% |
| !! | TGAAATTCAAAAATAAATTA+AGG | - | chr6_1:52626690-52626709 | None:intergenic | 10.0% |
| !!! | TTTATTTTTGAATTTCATTT+TGG | + | chr6_1:52626693-52626712 | Msa0888320:intron | 10.0% |
| !! | TTAATAAAAAAAGTTAAATG+TGG | + | chr6_1:52626803-52626822 | Msa0888320:intron | 10.0% |
| !! | TAATAAAAAAAGTTAAATGT+GGG | + | chr6_1:52626804-52626823 | Msa0888320:intron | 10.0% |
| !! | TAATAAAAAAAGTTAAATGT+GGG | - | chr6_1:52626804-52626823 | None:intergenic | 10.0% |
| !! | TTAATAAAAAAAGTTAAATG+TGG | - | chr6_1:52626803-52626822 | None:intergenic | 10.0% |
| !!! | ACTTTTTTTATTAAACATAA+CGG | + | chr6_1:52626940-52626959 | Msa0888320:intron | 10.0% |
| !! | TAAAATTCAAAAATAAGTTA+AGG | + | chr6_1:52627036-52627055 | Msa0888320:intron | 10.0% |
| !! | AAAATTCAAAAATAAGTTAA+GGG | + | chr6_1:52627037-52627056 | Msa0888320:intron | 10.0% |
| !!! | AATCAAATGTTAATATTTTA+TGG | + | chr6_1:52627867-52627886 | Msa0888320:intron | 10.0% |
| !!! | ATCAAATGTTAATATTTTAT+GGG | + | chr6_1:52627868-52627887 | Msa0888320:intron | 10.0% |
| !!! | TAACTGTTATTTATTGTAAA+AGG | + | chr6_1:52626152-52626171 | Msa0888320:intron | 15.0% |
| !!! | TTCCTCTTTATTTTTTTTTT+AGG | - | chr6_1:52627081-52627100 | None:intergenic | 15.0% |
| !! | TGTAATTTAATAACTTAAAC+TGG | - | chr6_1:52627433-52627452 | None:intergenic | 15.0% |
| !!! | ATTTCATGTATGAAAATTTT+TGG | + | chr6_1:52627807-52627826 | Msa0888320:intron | 15.0% |
| !!! | TAAAATATTTCTTAAGCTTT+TGG | - | chr6_1:52627838-52627857 | None:intergenic | 15.0% |
| !!! | AAAAGCTTAAGAAATATTTT+AGG | + | chr6_1:52627837-52627856 | Msa0888320:intron | 15.0% |
| !!! | AAAGCTTAAGAAATATTTTA+GGG | + | chr6_1:52627838-52627857 | Msa0888320:intron | 15.0% |
| !!! | TCAAATGTTAATATTTTATG+GGG | + | chr6_1:52627869-52627888 | Msa0888320:intron | 15.0% |
| !!! | TACATTTTTTTTTCTTTTTC+AGG | + | chr6_1:52627970-52627989 | Msa0888320:intron | 15.0% |
| !!! | ACATTTTTTTTTCTTTTTCA+GGG | + | chr6_1:52627971-52627990 | Msa0888320:intron | 15.0% |
| !!! | ATTCAATTTTTCATTATTCA+AGG | - | chr6_1:52628137-52628156 | None:intergenic | 15.0% |
| !!! | AATTCTTGATCAAAATTTTA+TGG | - | chr6_1:52628194-52628213 | None:intergenic | 15.0% |
| !! | ACAAAAAAGTAATAAAATTG+AGG | + | chr6_1:52628429-52628448 | Msa0888320:intron | 15.0% |
| !! | AAGAAAGAAAAAAAAGAAAA+AGG | - | chr6_1:52628986-52629005 | None:intergenic | 15.0% |
| !! | TAAAAATTGTTAATTGGATA+TGG | - | chr6_1:52629880-52629899 | None:intergenic | 15.0% |
| !! | AGGTATTAAAAATTGTTAAT+TGG | - | chr6_1:52629886-52629905 | None:intergenic | 15.0% |
| !!! | TAATTAACAAGTTGAATTTA+AGG | + | chr6_1:52630017-52630036 | Msa0888320:intron | 15.0% |
| !!! | AATTAACAAGTTGAATTTAA+GGG | + | chr6_1:52630018-52630037 | Msa0888320:intron | 15.0% |
| !! | AATGATGAATTTAATTAACA+TGG | - | chr6_1:52630118-52630137 | None:intergenic | 15.0% |
| !!! | TACATTTTTTTTTCTTTTTC+AGG | + | chr6_1:52627970-52627989 | Msa0888320:intron | 15.0% |
| !!! | ACATTTTTTTTTCTTTTTCA+GGG | + | chr6_1:52627971-52627990 | Msa0888320:intron | 15.0% |
| !!! | ATTCAATTTTTCATTATTCA+AGG | - | chr6_1:52628137-52628156 | None:intergenic | 15.0% |
| !!! | AATTCTTGATCAAAATTTTA+TGG | - | chr6_1:52628194-52628213 | None:intergenic | 15.0% |
| !! | ACAAAAAAGTAATAAAATTG+AGG | + | chr6_1:52628429-52628448 | Msa0888320:intron | 15.0% |
| !!! | TTACTTTTTTGTTTAATTTC+AGG | - | chr6_1:52630700-52630719 | None:intergenic | 15.0% |
| !! | ACAAAAAAGTAATAAAATTG+AGG | + | chr6_1:52628429-52628448 | Msa0888320:intron | 15.0% |
| !! | TAAAAATTGTTAATTGGATA+TGG | - | chr6_1:52629880-52629899 | None:intergenic | 15.0% |
| !! | AGGTATTAAAAATTGTTAAT+TGG | - | chr6_1:52629886-52629905 | None:intergenic | 15.0% |
| !!! | TAATTAACAAGTTGAATTTA+AGG | + | chr6_1:52630017-52630036 | Msa0888320:intron | 15.0% |
| !!! | AATTAACAAGTTGAATTTAA+GGG | + | chr6_1:52630018-52630037 | Msa0888320:intron | 15.0% |
| !! | AATGATGAATTTAATTAACA+TGG | - | chr6_1:52630118-52630137 | None:intergenic | 15.0% |
| !!! | TACATTTTTTTTTCTTTTTC+AGG | + | chr6_1:52627970-52627989 | Msa0888320:intron | 15.0% |
| !!! | ACATTTTTTTTTCTTTTTCA+GGG | + | chr6_1:52627971-52627990 | Msa0888320:intron | 15.0% |
| !!! | ATTCAATTTTTCATTATTCA+AGG | - | chr6_1:52628137-52628156 | None:intergenic | 15.0% |
| !!! | AATTCTTGATCAAAATTTTA+TGG | - | chr6_1:52628194-52628213 | None:intergenic | 15.0% |
| !! | ACAAAAAAGTAATAAAATTG+AGG | + | chr6_1:52628429-52628448 | Msa0888320:intron | 15.0% |
| !!! | TTTCTTTTTTGTTTAATTTC+AGG | - | chr6_1:52632962-52632981 | None:intergenic | 15.0% |
| !! | ACAAAAAAGAAATAAAATTG+AGG | + | chr6_1:52632970-52632989 | Msa0888320:intron | 15.0% |
| !! | AAGAAAGAAAAAAAAGAAAA+AGG | - | chr6_1:52628986-52629005 | None:intergenic | 15.0% |
| !! | TAAAAATTGTTAATTGGATA+TGG | - | chr6_1:52629880-52629899 | None:intergenic | 15.0% |
| !! | AGGTATTAAAAATTGTTAAT+TGG | - | chr6_1:52629886-52629905 | None:intergenic | 15.0% |
| !! | AATGATGAATTTAATTAACA+TGG | - | chr6_1:52630118-52630137 | None:intergenic | 15.0% |
| !!! | TACATTTTTTTTTCTTTTTC+AGG | + | chr6_1:52627970-52627989 | Msa0888320:intron | 15.0% |
| !!! | ACATTTTTTTTTCTTTTTCA+GGG | + | chr6_1:52627971-52627990 | Msa0888320:intron | 15.0% |
| !!! | ATTCAATTTTTCATTATTCA+AGG | - | chr6_1:52628137-52628156 | None:intergenic | 15.0% |
| !!! | AATTCTTGATCAAAATTTTA+TGG | - | chr6_1:52628194-52628213 | None:intergenic | 15.0% |
| !! | ACAAAAAAGTAATAAAATTG+AGG | + | chr6_1:52628429-52628448 | Msa0888320:intron | 15.0% |
| !!! | TTACTTTTTTGTTTAATTTC+AGG | - | chr6_1:52630700-52630719 | None:intergenic | 15.0% |
| !! | ACAAAAAAGTAATAAAATTG+AGG | + | chr6_1:52628429-52628448 | Msa0888320:intron | 15.0% |
| !!! | ACTTTTGAAAGTAAATGAAA+TGG | + | chr6_1:52626064-52626083 | Msa0888320:CDS | 20.0% |
| !! | ATAAAAAAAGGCTTAATACA+TGG | + | chr6_1:52626657-52626676 | Msa0888320:intron | 20.0% |
| !!! | TTGAGACAATTTAAAGTTAA+GGG | - | chr6_1:52627006-52627025 | None:intergenic | 20.0% |
| !!! | ATTGAGACAATTTAAAGTTA+AGG | - | chr6_1:52627005-52627024 | None:intergenic | 20.0% |
| !! | AACTTTAAATTGTCTCAATT+TGG | + | chr6_1:52626722-52626741 | Msa0888320:intron | 20.0% |
| !!! | TTTTTATTAAACATAACGGA+AGG | + | chr6_1:52626944-52626963 | Msa0888320:intron | 20.0% |
| !!! | TTTTATTAAACATAACGGAA+GGG | + | chr6_1:52626945-52626964 | Msa0888320:intron | 20.0% |
| !! | AACTTTAAATTGTCTCAATT+TGG | - | chr6_1:52626722-52626741 | None:intergenic | 20.0% |
| !!! | ATTGAGACAATTTAAAGTTA+AGG | + | chr6_1:52627005-52627024 | Msa0888320:intron | 20.0% |
| !!! | TTGAGACAATTTAAAGTTAA+GGG | + | chr6_1:52627006-52627025 | Msa0888320:intron | 20.0% |
| !! | AGCCTAAAAAAAAAATAAAG+AGG | + | chr6_1:52627076-52627095 | Msa0888320:intron | 20.0% |
| !! | TAATAATTATGACAGAAAAC+TGG | - | chr6_1:52627281-52627300 | None:intergenic | 20.0% |
| !! | TCATAATTTCTACTAATTCT+TGG | + | chr6_1:52627728-52627747 | Msa0888320:intron | 20.0% |
| !!! | AAGCTTAAGAAATATTTTAG+GGG | + | chr6_1:52627839-52627858 | Msa0888320:intron | 20.0% |
| !!! | ATTCAACCTTTAAAAAGTTA+AGG | + | chr6_1:52627914-52627933 | Msa0888320:intron | 20.0% |
| !!! | CATTTTTTTTTCTTTTTCAG+GGG | + | chr6_1:52627972-52627991 | Msa0888320:intron | 20.0% |
| !! | GATAAGAAAATGACAATAAT+TGG | + | chr6_1:52628021-52628040 | Msa0888320:CDS | 20.0% |
| !! | AAAGAAAGAAGAAAAAAAGA+AGG | + | chr6_1:52628758-52628777 | Msa0888320:CDS | 20.0% |
| !! | TAATACAATGTATTCAACTA+TGG | + | chr6_1:52629106-52629125 | Msa0888320:intron | 20.0% |
| !! | AAAAATAACAATCGAGAATT+TGG | + | chr6_1:52629142-52629161 | Msa0888320:intron | 20.0% |
| !! | AAAATAACAATCGAGAATTT+GGG | + | chr6_1:52629143-52629162 | Msa0888320:intron | 20.0% |
| !! | ACTTGAAATTAATTCTTCAT+AGG | - | chr6_1:52629355-52629374 | None:intergenic | 20.0% |
| !! | AAACTTCAAAAGTTGTTTAA+AGG | - | chr6_1:52629617-52629636 | None:intergenic | 20.0% |
| !! | AAAAATTTGGTATCGTTATT+AGG | - | chr6_1:52629825-52629844 | None:intergenic | 20.0% |
| !!! | CATTTTTTTTTCTTTTTCAG+GGG | + | chr6_1:52627972-52627991 | Msa0888320:intron | 20.0% |
| !! | GATAAGAAAATGACAATAAT+TGG | + | chr6_1:52628021-52628040 | Msa0888320:CDS | 20.0% |
| !! | AAAGAAAGAAGAAAAAAAGA+AGG | + | chr6_1:52628758-52628777 | Msa0888320:CDS | 20.0% |
| !! | TAATACAATGTATTCAACTA+TGG | + | chr6_1:52629106-52629125 | Msa0888320:intron | 20.0% |
| !! | AAAAATAACAATCGAGAATT+TGG | + | chr6_1:52629142-52629161 | Msa0888320:intron | 20.0% |
| !! | AAAATAACAATCGAGAATTT+GGG | + | chr6_1:52629143-52629162 | Msa0888320:intron | 20.0% |
| !! | ACTTGAAATTAATTCTTCAT+AGG | - | chr6_1:52629355-52629374 | None:intergenic | 20.0% |
| !! | AAACTTCAAAAGTTGTTTAA+AGG | - | chr6_1:52629617-52629636 | None:intergenic | 20.0% |
| !! | AAAAATTTGGTATCGTTATT+AGG | - | chr6_1:52629825-52629844 | None:intergenic | 20.0% |
| !!! | CATTTTTTTTTCTTTTTCAG+GGG | + | chr6_1:52627972-52627991 | Msa0888320:intron | 20.0% |
| !! | GATAAGAAAATGACAATAAT+TGG | + | chr6_1:52628021-52628040 | Msa0888320:CDS | 20.0% |
| !! | AAAGAAAGAAGAAAAAAAGA+AGG | + | chr6_1:52628758-52628777 | Msa0888320:CDS | 20.0% |
| !! | TAATACAATGTATTCAACTA+TGG | + | chr6_1:52629106-52629125 | Msa0888320:intron | 20.0% |
| !! | AAAAATAACAATCGAGAATT+TGG | + | chr6_1:52629142-52629161 | Msa0888320:intron | 20.0% |
| !! | AAAATAACAATCGAGAATTT+GGG | + | chr6_1:52629143-52629162 | Msa0888320:intron | 20.0% |
| !! | ACTTGAAATTAATTCTTCAT+AGG | - | chr6_1:52629355-52629374 | None:intergenic | 20.0% |
| !! | AAAAATTTGGTATCGTTATT+AGG | - | chr6_1:52629825-52629844 | None:intergenic | 20.0% |
| !!! | TAATTAACAAGTTGACTTTA+AGG | + | chr6_1:52634540-52634559 | Msa0888320:intron | 20.0% |
| !!! | AATTAACAAGTTGACTTTAA+GGG | + | chr6_1:52634541-52634560 | Msa0888320:intron | 20.0% |
| !!! | CATTTTTTTTTCTTTTTCAG+GGG | + | chr6_1:52627972-52627991 | Msa0888320:intron | 20.0% |
| !! | GATAAGAAAATGACAATAAT+TGG | + | chr6_1:52628021-52628040 | Msa0888320:CDS | 20.0% |
| !! | AAAGAAAGAAGAAAAAAAGA+AGG | + | chr6_1:52628758-52628777 | Msa0888320:CDS | 20.0% |
| !!! | TAAATGAAATGGTTGATTTG+TGG | + | chr6_1:52626075-52626094 | Msa0888320:CDS | 25.0% |
| !!! | TTTTCACTTTCTCTTTGTTT+CGG | - | chr6_1:52626245-52626264 | None:intergenic | 25.0% |
| ! | AATAAGAATATAATGTGAGC+TGG | - | chr6_1:52626451-52626470 | None:intergenic | 25.0% |
| ! | TAAACATAACCGAAAACTAA+TGG | - | chr6_1:52626786-52626805 | None:intergenic | 25.0% |
| !!! | GAGAACTTGTTTTTTCTTTA+GGG | - | chr6_1:52626886-52626905 | None:intergenic | 25.0% |
| !!! | TGAGAACTTGTTTTTTCTTT+AGG | - | chr6_1:52626887-52626906 | None:intergenic | 25.0% |
| ! | TTTAGGCTTAATACATACTT+TGG | - | chr6_1:52627064-52627083 | None:intergenic | 25.0% |
| !! | ATGATTGCTCAAAAATCTTT+TGG | + | chr6_1:52627144-52627163 | Msa0888320:intron | 25.0% |
| ! | TGATAAATCAAACATGGAAA+GGG | - | chr6_1:52627347-52627366 | None:intergenic | 25.0% |
| ! | TTGATAAATCAAACATGGAA+AGG | - | chr6_1:52627348-52627367 | None:intergenic | 25.0% |
| ! | GATGTTTGATAAATCAAACA+TGG | - | chr6_1:52627353-52627372 | None:intergenic | 25.0% |
| ! | AAGGCAAATTAAAAGAGAAA+GGG | - | chr6_1:52627457-52627476 | None:intergenic | 25.0% |
| ! | AAAGGCAAATTAAAAGAGAA+AGG | - | chr6_1:52627458-52627477 | None:intergenic | 25.0% |
| !!! | TTTCTCTTTTAATTTGCCTT+TGG | + | chr6_1:52627457-52627476 | Msa0888320:intron | 25.0% |
| ! | TCTCAAATTGAATATTCCAA+AGG | - | chr6_1:52627476-52627495 | None:intergenic | 25.0% |
| ! | TGCATAAAATGATTAGATGT+TGG | - | chr6_1:52627618-52627637 | None:intergenic | 25.0% |
| !! | TTTCCTCCTTAACTTTTTAA+AGG | - | chr6_1:52627923-52627942 | None:intergenic | 25.0% |
| ! | TAAAAAGTTAAGGAGGAAAA+AGG | + | chr6_1:52627924-52627943 | Msa0888320:intron | 25.0% |
| !!! | AAGGTTTTTTTTTATTCGAG+AGG | - | chr6_1:52628118-52628137 | None:intergenic | 25.0% |
| !! | CTTGATCAAAATTTTATGGA+AGG | - | chr6_1:52628190-52628209 | None:intergenic | 25.0% |
| ! | AGTAATAAAATTGAGGATTC+TGG | + | chr6_1:52628436-52628455 | Msa0888320:intron | 25.0% |
| ! | GTAATAAAATTGAGGATTCT+GGG | + | chr6_1:52628437-52628456 | Msa0888320:intron | 25.0% |
| ! | TTGTTTCATAATTGTCACAA+TGG | - | chr6_1:52628512-52628531 | None:intergenic | 25.0% |
| !!! | TTGTTTCCTTCTTTAGTTTT+TGG | + | chr6_1:52629004-52629023 | Msa0888320:intron | 25.0% |
| !!! | TGTTTCCTTCTTTAGTTTTT+GGG | + | chr6_1:52629005-52629024 | Msa0888320:intron | 25.0% |
| !!! | GTTTCTCTTATCTTAGTTTT+TGG | + | chr6_1:52629028-52629047 | Msa0888320:intron | 25.0% |
| !! | GTTTATAATCTTAGTTCTTG+AGG | + | chr6_1:52629050-52629069 | Msa0888320:intron | 25.0% |
| ! | AATGTATTCAACTATGGATT+CGG | + | chr6_1:52629112-52629131 | Msa0888320:intron | 25.0% |
| !! | GAATTTGGGTTTACTTAATT+TGG | + | chr6_1:52629157-52629176 | Msa0888320:intron | 25.0% |
| ! | AAATTGATTACCTTCATACT+TGG | - | chr6_1:52629383-52629402 | None:intergenic | 25.0% |
| ! | ATCAATTTCAAATCCATTCT+AGG | + | chr6_1:52629406-52629425 | Msa0888320:intron | 25.0% |
| ! | AGACAAAAACAAAATAGTGA+AGG | + | chr6_1:52629457-52629476 | Msa0888320:intron | 25.0% |
| ! | TCAAATGAATTTGAAGACAT+TGG | - | chr6_1:52629541-52629560 | None:intergenic | 25.0% |
| !!! | TTAGAGTTTTGATGATAACA+AGG | - | chr6_1:52629906-52629925 | None:intergenic | 25.0% |
| ! | TGTTATCATCAAAACTCTAA+AGG | + | chr6_1:52629906-52629925 | Msa0888320:intron | 25.0% |
| ! | GTTATCATCAAAACTCTAAA+GGG | + | chr6_1:52629907-52629926 | Msa0888320:intron | 25.0% |
| ! | AATGTTTGTCATCATCAAAA+CGG | - | chr6_1:52629967-52629986 | None:intergenic | 25.0% |
| ! | ATTAACATGGATAAAACTCA+GGG | - | chr6_1:52630105-52630124 | None:intergenic | 25.0% |
| ! | AATTAACATGGATAAAACTC+AGG | - | chr6_1:52630106-52630125 | None:intergenic | 25.0% |
| !!! | AAGGTTTTTTTTTATTCGAG+AGG | - | chr6_1:52628118-52628137 | None:intergenic | 25.0% |
| !! | CTTGATCAAAATTTTATGGA+AGG | - | chr6_1:52628190-52628209 | None:intergenic | 25.0% |
| ! | AGTAATAAAATTGAGGATTC+TGG | + | chr6_1:52628436-52628455 | Msa0888320:intron | 25.0% |
| ! | GTAATAAAATTGAGGATTCT+GGG | + | chr6_1:52628437-52628456 | Msa0888320:intron | 25.0% |
| !!! | TTTTGTTTAATTTCAGGTGT+GGG | - | chr6_1:52630694-52630713 | None:intergenic | 25.0% |
| !!! | TTTTTGTTTAATTTCAGGTG+TGG | - | chr6_1:52630695-52630714 | None:intergenic | 25.0% |
| ! | AGTAATAAAATTGAGGATTC+TGG | + | chr6_1:52628436-52628455 | Msa0888320:intron | 25.0% |
| ! | GTAATAAAATTGAGGATTCT+GGG | + | chr6_1:52628437-52628456 | Msa0888320:intron | 25.0% |
| ! | TTGTTTCATAATTGTCACAA+TGG | - | chr6_1:52628512-52628531 | None:intergenic | 25.0% |
| !!! | TTGTTTCCTTCTTTAGTTTT+TGG | + | chr6_1:52629004-52629023 | Msa0888320:intron | 25.0% |
| !!! | TGTTTCCTTCTTTAGTTTTT+GGG | + | chr6_1:52629005-52629024 | Msa0888320:intron | 25.0% |
| !!! | GTTTCTCTTATCTTAGTTTT+TGG | + | chr6_1:52629028-52629047 | Msa0888320:intron | 25.0% |
| !! | GTTTATAATCTTAGTTCTTG+AGG | + | chr6_1:52629050-52629069 | Msa0888320:intron | 25.0% |
| ! | AATGTATTCAACTATGGATT+CGG | + | chr6_1:52629112-52629131 | Msa0888320:intron | 25.0% |
| !! | GAATTTGGGTTTACTTAATT+TGG | + | chr6_1:52629157-52629176 | Msa0888320:intron | 25.0% |
| ! | AAATTGATTACCTTCATACT+TGG | - | chr6_1:52629383-52629402 | None:intergenic | 25.0% |
| ! | ATCAATTTCAAATCCATTCT+AGG | + | chr6_1:52629406-52629425 | Msa0888320:intron | 25.0% |
| ! | AGACAAAAACAAAATAGTGA+AGG | + | chr6_1:52629457-52629476 | Msa0888320:intron | 25.0% |
| ! | TCAAATGAATTTGAAGACAT+TGG | - | chr6_1:52629541-52629560 | None:intergenic | 25.0% |
| !!! | TTAGAGTTTTGATGATAACA+AGG | - | chr6_1:52629906-52629925 | None:intergenic | 25.0% |
| ! | TGTTATCATCAAAACTCTAA+AGG | + | chr6_1:52629906-52629925 | Msa0888320:intron | 25.0% |
| ! | GTTATCATCAAAACTCTAAA+GGG | + | chr6_1:52629907-52629926 | Msa0888320:intron | 25.0% |
| ! | AATGTTTGTCATCATCAAAA+CGG | - | chr6_1:52629967-52629986 | None:intergenic | 25.0% |
| ! | ATTAACATGGATAAAACTCA+GGG | - | chr6_1:52630105-52630124 | None:intergenic | 25.0% |
| ! | AATTAACATGGATAAAACTC+AGG | - | chr6_1:52630106-52630125 | None:intergenic | 25.0% |
| !!! | AAGGTTTTTTTTTATTCGAG+AGG | - | chr6_1:52628118-52628137 | None:intergenic | 25.0% |
| !! | CTTGATCAAAATTTTATGGA+AGG | - | chr6_1:52628190-52628209 | None:intergenic | 25.0% |
| ! | AGTAATAAAATTGAGGATTC+TGG | + | chr6_1:52628436-52628455 | Msa0888320:intron | 25.0% |
| ! | GTAATAAAATTGAGGATTCT+GGG | + | chr6_1:52628437-52628456 | Msa0888320:intron | 25.0% |
| !!! | TTTTGTTTAATTTCAGGTGT+GGG | - | chr6_1:52630694-52630713 | None:intergenic | 25.0% |
| !!! | TTTTTGTTTAATTTCAGGTG+TGG | - | chr6_1:52630695-52630714 | None:intergenic | 25.0% |
| ! | AGAAATAAAATTGAGGATTC+TGG | + | chr6_1:52632977-52632996 | Msa0888320:intron | 25.0% |
| ! | GAAATAAAATTGAGGATTCT+GGG | + | chr6_1:52632978-52632997 | Msa0888320:intron | 25.0% |
| ! | TTGTTTCATAATTGTCACAA+TGG | - | chr6_1:52628512-52628531 | None:intergenic | 25.0% |
| !!! | TTGTTTCCTTCTTTAGTTTT+TGG | + | chr6_1:52629004-52629023 | Msa0888320:intron | 25.0% |
| !!! | TGTTTCCTTCTTTAGTTTTT+GGG | + | chr6_1:52629005-52629024 | Msa0888320:intron | 25.0% |
| !!! | GTTTCTCTTATCTTAGTTTT+TGG | + | chr6_1:52629028-52629047 | Msa0888320:intron | 25.0% |
| !! | GTTTATAATCTTAGTTCTTG+AGG | + | chr6_1:52629050-52629069 | Msa0888320:intron | 25.0% |
| ! | AATGTATTCAACTATGGATT+CGG | + | chr6_1:52629112-52629131 | Msa0888320:intron | 25.0% |
| !! | GAATTTGGGTTTACTTAATT+TGG | + | chr6_1:52629157-52629176 | Msa0888320:intron | 25.0% |
| ! | AAATTGATTACCTTCATACT+TGG | - | chr6_1:52629383-52629402 | None:intergenic | 25.0% |
| ! | ATCAATTTCAAATCCATTCT+AGG | + | chr6_1:52629406-52629425 | Msa0888320:intron | 25.0% |
| ! | AGACAAAAACAAAATAGTGA+AGG | + | chr6_1:52629457-52629476 | Msa0888320:intron | 25.0% |
| ! | TCAAATGAATTTGAAGACAT+TGG | - | chr6_1:52629541-52629560 | None:intergenic | 25.0% |
| ! | AAACTTCAAAAGCTGTTTAA+AGG | - | chr6_1:52634140-52634159 | None:intergenic | 25.0% |
| !!! | TTAGAGTTTTGATGATAACA+AGG | - | chr6_1:52629906-52629925 | None:intergenic | 25.0% |
| ! | TGTTATCATCAAAACTCTAA+AGG | + | chr6_1:52629906-52629925 | Msa0888320:intron | 25.0% |
| ! | GTTATCATCAAAACTCTAAA+GGG | + | chr6_1:52629907-52629926 | Msa0888320:intron | 25.0% |
| ! | AATGTTTGTCATCATCAAAA+CGG | - | chr6_1:52629967-52629986 | None:intergenic | 25.0% |
| ! | ATTAACATGGATAAAACTCA+GGG | - | chr6_1:52630105-52630124 | None:intergenic | 25.0% |
| ! | AATTAACATGGATAAAACTC+AGG | - | chr6_1:52630106-52630125 | None:intergenic | 25.0% |
| !!! | AAGGTTTTTTTTTATTCGAG+AGG | - | chr6_1:52628118-52628137 | None:intergenic | 25.0% |
| !! | CTTGATCAAAATTTTATGGA+AGG | - | chr6_1:52628190-52628209 | None:intergenic | 25.0% |
| ! | AGTAATAAAATTGAGGATTC+TGG | + | chr6_1:52628436-52628455 | Msa0888320:intron | 25.0% |
| ! | GTAATAAAATTGAGGATTCT+GGG | + | chr6_1:52628437-52628456 | Msa0888320:intron | 25.0% |
| !!! | TTTTGTTTAATTTCAGGTGT+GGG | - | chr6_1:52630694-52630713 | None:intergenic | 25.0% |
| !!! | TTTTTGTTTAATTTCAGGTG+TGG | - | chr6_1:52630695-52630714 | None:intergenic | 25.0% |
| ! | AGTAATAAAATTGAGGATTC+TGG | + | chr6_1:52628436-52628455 | Msa0888320:intron | 25.0% |
| ! | GTAATAAAATTGAGGATTCT+GGG | + | chr6_1:52628437-52628456 | Msa0888320:intron | 25.0% |
| ! | TTGTTTCATAATTGTCACAA+TGG | - | chr6_1:52628512-52628531 | None:intergenic | 25.0% |
| AACACTTTCATGTTGAACAT+AGG | - | chr6_1:52626129-52626148 | None:intergenic | 30.0% | |
| ! | TTGTATGTGAGTGTATTTTC+AGG | + | chr6_1:52626603-52626622 | Msa0888320:intron | 30.0% |
| ! | TGTATGTGAGTGTATTTTCA+GGG | + | chr6_1:52626604-52626623 | Msa0888320:intron | 30.0% |
| AAAAGGCTTAATACATGGTT+TGG | + | chr6_1:52626662-52626681 | Msa0888320:intron | 30.0% | |
| GTAAACGAAGAGATAGTTAA+GGG | - | chr6_1:52626749-52626768 | None:intergenic | 30.0% | |
| ATAACCGAAAACTAATGGAA+GGG | - | chr6_1:52626781-52626800 | None:intergenic | 30.0% | |
| GTAAACGGAGAGATAATTAT+TGG | + | chr6_1:52626977-52626996 | Msa0888320:intron | 30.0% | |
| AATCATACTTGTACTGTTGT+AGG | - | chr6_1:52627130-52627149 | None:intergenic | 30.0% | |
| AATTATGACAGAAAACTGGA+AGG | - | chr6_1:52627277-52627296 | None:intergenic | 30.0% | |
| GAAAGGGAAAAATTGAGAAA+TGG | - | chr6_1:52627331-52627350 | None:intergenic | 30.0% | |
| ATGACAGAAACTAGTGTTAA+AGG | + | chr6_1:52627522-52627541 | Msa0888320:intron | 30.0% | |
| ! | ATCATTTTATGCAACATCTC+AGG | + | chr6_1:52627625-52627644 | Msa0888320:intron | 30.0% |
| ! | GAATTTTATTACTGAGACGT+TGG | - | chr6_1:52627660-52627679 | None:intergenic | 30.0% |
| ! | CAACCTTTAAAAAGTTAAGG+AGG | + | chr6_1:52627917-52627936 | Msa0888320:intron | 30.0% |
| !!! | CAATTTTTAAGATTGCATCG+GGG | - | chr6_1:52628094-52628113 | None:intergenic | 30.0% |
| !!! | CCAATTTTTAAGATTGCATC+GGG | - | chr6_1:52628095-52628114 | None:intergenic | 30.0% |
| !!! | GCCAATTTTTAAGATTGCAT+CGG | - | chr6_1:52628096-52628115 | None:intergenic | 30.0% |
| TTAATGTTGTGTCGAAGTTA+AGG | + | chr6_1:52628658-52628677 | Msa0888320:intron | 30.0% | |
| CATGCTGAAATAATTGCAAT+TGG | + | chr6_1:52628690-52628709 | Msa0888320:CDS | 30.0% | |
| !!! | TCTTTTTTCTCTTCTTTTGC+TGG | - | chr6_1:52628717-52628736 | None:intergenic | 30.0% |
| AGCAAAAGAAGAGAAAAAAG+AGG | + | chr6_1:52628716-52628735 | Msa0888320:CDS | 30.0% | |
| GAAAGAAGAAAAAAAGAAGG+AGG | + | chr6_1:52628761-52628780 | Msa0888320:CDS | 30.0% | |
| ! | TCTTTTGTGTCCTTTTTCTT+TGG | - | chr6_1:52628789-52628808 | None:intergenic | 30.0% |
| AAAGGACACAAAAGATGAAT+TGG | + | chr6_1:52628794-52628813 | Msa0888320:CDS | 30.0% | |
| CTGTAATAGTGATAAGGATA+TGG | - | chr6_1:52628867-52628886 | None:intergenic | 30.0% | |
| ACAGATCTGTAATAGTGATA+AGG | - | chr6_1:52628873-52628892 | None:intergenic | 30.0% | |
| TTATCACTATTACAGATCTG+TGG | + | chr6_1:52628872-52628891 | Msa0888320:CDS | 30.0% | |
| !!! | GTTTCCTTCTTTAGTTTTTG+GGG | + | chr6_1:52629006-52629025 | Msa0888320:intron | 30.0% |
| GTCTTCACTTCTTTAAATAG+AGG | + | chr6_1:52629234-52629253 | Msa0888320:intron | 30.0% | |
| AATAACAGTTATGCCTAGAA+TGG | - | chr6_1:52629422-52629441 | None:intergenic | 30.0% | |
| AAACAAAATAGTGAAGGTAG+TGG | + | chr6_1:52629463-52629482 | Msa0888320:intron | 30.0% | |
| ATGAATTTGAAGACATTGGA+TGG | - | chr6_1:52629537-52629556 | None:intergenic | 30.0% | |
| ! | CGATACCAAATTTTTGTCTA+TGG | + | chr6_1:52629830-52629849 | Msa0888320:intron | 30.0% |
| TAATATTTGTTCAAGTGTGC+AGG | - | chr6_1:52629857-52629876 | None:intergenic | 30.0% | |
| ATGTTTGTCATCATCAAAAC+GGG | - | chr6_1:52629966-52629985 | None:intergenic | 30.0% | |
| ! | TTAAAGTACTATTGGACTCA+GGG | - | chr6_1:52630063-52630082 | None:intergenic | 30.0% |
| TTAACATGGATAAAACTCAG+GGG | - | chr6_1:52630104-52630123 | None:intergenic | 30.0% | |
| !!! | CAATTTTTAAGATTGCATCG+GGG | - | chr6_1:52628094-52628113 | None:intergenic | 30.0% |
| !!! | CCAATTTTTAAGATTGCATC+GGG | - | chr6_1:52628095-52628114 | None:intergenic | 30.0% |
| !!! | GCCAATTTTTAAGATTGCAT+CGG | - | chr6_1:52628096-52628115 | None:intergenic | 30.0% |
| CAATAAAGCATAAGTGCATA+AGG | - | chr6_1:52628271-52628290 | None:intergenic | 30.0% | |
| TTAATGTTGTGTCGAAGTTA+AGG | + | chr6_1:52628658-52628677 | Msa0888320:intron | 30.0% | |
| CATGCTGAAATAATTGCAAT+TGG | + | chr6_1:52628690-52628709 | Msa0888320:CDS | 30.0% | |
| !!! | TCTTTTTTCTCTTCTTTTGC+TGG | - | chr6_1:52628717-52628736 | None:intergenic | 30.0% |
| AGCAAAAGAAGAGAAAAAAG+AGG | + | chr6_1:52628716-52628735 | Msa0888320:CDS | 30.0% | |
| GAAAGAAGAAAAAAAGAAGG+AGG | + | chr6_1:52628761-52628780 | Msa0888320:CDS | 30.0% | |
| ! | TCTTTTGTGTCCTTTTTCTT+TGG | - | chr6_1:52628789-52628808 | None:intergenic | 30.0% |
| AAAGGACACAAAAGATGAAT+TGG | + | chr6_1:52628794-52628813 | Msa0888320:CDS | 30.0% | |
| CTGTAATAGTGATAAGGATA+TGG | - | chr6_1:52628867-52628886 | None:intergenic | 30.0% | |
| ACAGATCTGTAATAGTGATA+AGG | - | chr6_1:52628873-52628892 | None:intergenic | 30.0% | |
| TTATCACTATTACAGATCTG+TGG | + | chr6_1:52628872-52628891 | Msa0888320:CDS | 30.0% | |
| !!! | GTTTCCTTCTTTAGTTTTTG+GGG | + | chr6_1:52629006-52629025 | Msa0888320:intron | 30.0% |
| GTCTTCACTTCTTTAAATAG+AGG | + | chr6_1:52629234-52629253 | Msa0888320:intron | 30.0% | |
| AATAACAGTTATGCCTAGAA+TGG | - | chr6_1:52629422-52629441 | None:intergenic | 30.0% | |
| AAACAAAATAGTGAAGGTAG+TGG | + | chr6_1:52629463-52629482 | Msa0888320:intron | 30.0% | |
| ATGAATTTGAAGACATTGGA+TGG | - | chr6_1:52629537-52629556 | None:intergenic | 30.0% | |
| ! | CGATACCAAATTTTTGTCTA+TGG | + | chr6_1:52629830-52629849 | Msa0888320:intron | 30.0% |
| TAATATTTGTTCAAGTGTGC+AGG | - | chr6_1:52629857-52629876 | None:intergenic | 30.0% | |
| ATGTTTGTCATCATCAAAAC+GGG | - | chr6_1:52629966-52629985 | None:intergenic | 30.0% | |
| ! | TTAAAGTACTATTGGACTCA+GGG | - | chr6_1:52630063-52630082 | None:intergenic | 30.0% |
| TTAACATGGATAAAACTCAG+GGG | - | chr6_1:52630104-52630123 | None:intergenic | 30.0% | |
| !!! | CAATTTTTAAGATTGCATCG+GGG | - | chr6_1:52628094-52628113 | None:intergenic | 30.0% |
| !!! | CCAATTTTTAAGATTGCATC+GGG | - | chr6_1:52628095-52628114 | None:intergenic | 30.0% |
| !!! | GCCAATTTTTAAGATTGCAT+CGG | - | chr6_1:52628096-52628115 | None:intergenic | 30.0% |
| CAATAAAGCATAAGTGCATA+AGG | - | chr6_1:52628271-52628290 | None:intergenic | 30.0% | |
| TTAATGTTGTGTCGAAGTTA+AGG | + | chr6_1:52628658-52628677 | Msa0888320:intron | 30.0% | |
| CATGCTGAAATAATTGCAAT+TGG | + | chr6_1:52628690-52628709 | Msa0888320:CDS | 30.0% | |
| !!! | TCTTTTTTCTCTTCTTTTGC+TGG | - | chr6_1:52628717-52628736 | None:intergenic | 30.0% |
| AGCAAAAGAAGAGAAAAAAG+AGG | + | chr6_1:52628716-52628735 | Msa0888320:CDS | 30.0% | |
| GAAAGAAGAAAAAAAGAAGG+AGG | + | chr6_1:52628761-52628780 | Msa0888320:CDS | 30.0% | |
| ! | TCTTTTGTGTCCTTTTTCTT+TGG | - | chr6_1:52628789-52628808 | None:intergenic | 30.0% |
| AAAGGACACAAAAGATGAAT+TGG | + | chr6_1:52628794-52628813 | Msa0888320:CDS | 30.0% | |
| CTGTAATAGTGATAAGGATA+TGG | - | chr6_1:52628867-52628886 | None:intergenic | 30.0% | |
| ACAGATCTGTAATAGTGATA+AGG | - | chr6_1:52628873-52628892 | None:intergenic | 30.0% | |
| TTATCACTATTACAGATCTG+TGG | + | chr6_1:52628872-52628891 | Msa0888320:CDS | 30.0% | |
| !!! | GTTTCCTTCTTTAGTTTTTG+GGG | + | chr6_1:52629006-52629025 | Msa0888320:intron | 30.0% |
| GTCTTCACTTCTTTAAATAG+AGG | + | chr6_1:52629234-52629253 | Msa0888320:intron | 30.0% | |
| AATAACAGTTATGCCTAGAA+TGG | - | chr6_1:52629422-52629441 | None:intergenic | 30.0% | |
| AAACAAAATAGTGAAGGTAG+TGG | + | chr6_1:52629463-52629482 | Msa0888320:intron | 30.0% | |
| ATGAATTTGAAGACATTGGA+TGG | - | chr6_1:52629537-52629556 | None:intergenic | 30.0% | |
| ! | CGATACCAAATTTTTGTCTA+TGG | + | chr6_1:52629830-52629849 | Msa0888320:intron | 30.0% |
| TAATATTTGTTCAAGTGTGC+AGG | - | chr6_1:52629857-52629876 | None:intergenic | 30.0% | |
| ATGTTTGTCATCATCAAAAC+GGG | - | chr6_1:52629966-52629985 | None:intergenic | 30.0% | |
| ! | TTAAAGTACTATTGGACTCA+GGG | - | chr6_1:52630063-52630082 | None:intergenic | 30.0% |
| TTAACATGGATAAAACTCAG+GGG | - | chr6_1:52630104-52630123 | None:intergenic | 30.0% | |
| !!! | CAATTTTTAAGATTGCATCG+GGG | - | chr6_1:52628094-52628113 | None:intergenic | 30.0% |
| !!! | CCAATTTTTAAGATTGCATC+GGG | - | chr6_1:52628095-52628114 | None:intergenic | 30.0% |
| !!! | GCCAATTTTTAAGATTGCAT+CGG | - | chr6_1:52628096-52628115 | None:intergenic | 30.0% |
| CAATAAAGCATAAGTGCATA+AGG | - | chr6_1:52628271-52628290 | None:intergenic | 30.0% | |
| TTAATGTTGTGTCGAAGTTA+AGG | + | chr6_1:52628658-52628677 | Msa0888320:intron | 30.0% | |
| CATGCTGAAATAATTGCAAT+TGG | + | chr6_1:52628690-52628709 | Msa0888320:CDS | 30.0% | |
| !!! | TCTTTTTTCTCTTCTTTTGC+TGG | - | chr6_1:52628717-52628736 | None:intergenic | 30.0% |
| AGCAAAAGAAGAGAAAAAAG+AGG | + | chr6_1:52628716-52628735 | Msa0888320:CDS | 30.0% | |
| GAAAGAAGAAAAAAAGAAGG+AGG | + | chr6_1:52628761-52628780 | Msa0888320:CDS | 30.0% | |
| ! | TCTTTTGTGTCCTTTTTCTT+TGG | - | chr6_1:52628789-52628808 | None:intergenic | 30.0% |
| AAAGGACACAAAAGATGAAT+TGG | + | chr6_1:52628794-52628813 | Msa0888320:CDS | 30.0% | |
| CTGTAATAGTGATAAGGATA+TGG | - | chr6_1:52628867-52628886 | None:intergenic | 30.0% | |
| ACAGATCTGTAATAGTGATA+AGG | - | chr6_1:52628873-52628892 | None:intergenic | 30.0% | |
| TTATCACTATTACAGATCTG+TGG | + | chr6_1:52628872-52628891 | Msa0888320:CDS | 30.0% | |
| TTCATGTTGAACATAGGACA+AGG | - | chr6_1:52626123-52626142 | None:intergenic | 35.0% | |
| ! | CTTTCTCTTTGTTTCGGTAA+AGG | - | chr6_1:52626239-52626258 | None:intergenic | 35.0% |
| ! | GTATGTGAGTGTATTTTCAG+GGG | + | chr6_1:52626605-52626624 | Msa0888320:intron | 35.0% |
| GGTAAACGAAGAGATAGTTA+AGG | - | chr6_1:52626750-52626769 | None:intergenic | 35.0% | |
| TATCTCTTCGTTTACCAAAG+TGG | + | chr6_1:52626754-52626773 | Msa0888320:intron | 35.0% | |
| CATAACCGAAAACTAATGGA+AGG | - | chr6_1:52626782-52626801 | None:intergenic | 35.0% | |
| !! | CATATCGATTTGAAGCTAGT+GGG | - | chr6_1:52627230-52627249 | None:intergenic | 35.0% |
| !! | TCATATCGATTTGAAGCTAG+TGG | - | chr6_1:52627231-52627250 | None:intergenic | 35.0% |
| CTAGCTTCAAATCGATATGA+AGG | + | chr6_1:52627231-52627250 | Msa0888320:intron | 35.0% | |
| CAGAAAACTGGAAGGAAAAA+AGG | - | chr6_1:52627269-52627288 | None:intergenic | 35.0% | |
| CTTAAACTGGATCTCAAACT+CGG | - | chr6_1:52627420-52627439 | None:intergenic | 35.0% | |
| CAAGAAAAAAGCCATGAAGA+CGG | + | chr6_1:52627567-52627586 | Msa0888320:CDS | 35.0% | |
| !!! | TTTTTCTTTTTCAGGGGTTG+AGG | + | chr6_1:52627978-52627997 | Msa0888320:intron | 35.0% |
| CCCGATGCAATCTTAAAAAT+TGG | + | chr6_1:52628092-52628111 | Msa0888320:intron | 35.0% | |
| AAAATCTTCCGTGAACTCTA+TGG | + | chr6_1:52628218-52628237 | Msa0888320:intron | 35.0% | |
| TTCACATTCCATAGAGTTCA+CGG | - | chr6_1:52628229-52628248 | None:intergenic | 35.0% | |
| CTATGGAATGTGAAGTTACA+AGG | + | chr6_1:52628235-52628254 | Msa0888320:intron | 35.0% | |
| TAATTGTCACAATGGTCTAG+TGG | - | chr6_1:52628504-52628523 | None:intergenic | 35.0% | |
| TGAATTGGCTGATCTTATGA+AGG | + | chr6_1:52628809-52628828 | Msa0888320:CDS | 35.0% | |
| TAACAAATAACACACCCACT+TGG | - | chr6_1:52628909-52628928 | None:intergenic | 35.0% | |
| GAAACCCCAAAAACTAAAGA+AGG | - | chr6_1:52629013-52629032 | None:intergenic | 35.0% | |
| AGAAGTGAAGACTTAGAGAA+TGG | - | chr6_1:52629226-52629245 | None:intergenic | 35.0% | |
| ! | AACGACTCTTTTTAATGTGC+TGG | - | chr6_1:52629283-52629302 | None:intergenic | 35.0% |
| CATATCAGGCAAAAGATCAT+TGG | - | chr6_1:52629324-52629343 | None:intergenic | 35.0% | |
| ! | CAATGATCTTTTGCCTGATA+TGG | + | chr6_1:52629322-52629341 | Msa0888320:intron | 35.0% |
| CATAGGACAATAACCATATC+AGG | - | chr6_1:52629338-52629357 | None:intergenic | 35.0% | |
| GATTACCTTCATACTTGGAA+TGG | - | chr6_1:52629378-52629397 | None:intergenic | 35.0% | |
| !!! | TTTGTTTTTGTCTCTGCTTC+AGG | - | chr6_1:52629450-52629469 | None:intergenic | 35.0% |
| GAGCAATGGAATCAACAAAA+AGG | - | chr6_1:52629784-52629803 | None:intergenic | 35.0% | |
| GAAAGAACAAATGAGAGCAA+TGG | - | chr6_1:52629798-52629817 | None:intergenic | 35.0% | |
| CAGGACCATAGACAAAAATT+TGG | - | chr6_1:52629838-52629857 | None:intergenic | 35.0% | |
| TGTTTGTCATCATCAAAACG+GGG | - | chr6_1:52629965-52629984 | None:intergenic | 35.0% | |
| ! | TAAAGTACTATTGGACTCAG+GGG | - | chr6_1:52630062-52630081 | None:intergenic | 35.0% |
| ! | CTTAAAGTACTATTGGACTC+AGG | - | chr6_1:52630064-52630083 | None:intergenic | 35.0% |
| CTGAGTCCAATAGTACTTTA+AGG | + | chr6_1:52630062-52630081 | Msa0888320:intron | 35.0% | |
| !! | TCCAATAGTACTTTAAGGTG+AGG | + | chr6_1:52630067-52630086 | Msa0888320:intron | 35.0% |
| ! | ACCTCACCTTAAAGTACTAT+TGG | - | chr6_1:52630071-52630090 | None:intergenic | 35.0% |
| TAACATGGATAAAACTCAGG+GGG | - | chr6_1:52630103-52630122 | None:intergenic | 35.0% | |
| !!! | TTTTTCTTTTTCAGGGGTTG+AGG | + | chr6_1:52627978-52627997 | Msa0888320:intron | 35.0% |
| CCCGATGCAATCTTAAAAAT+TGG | + | chr6_1:52628092-52628111 | Msa0888320:intron | 35.0% | |
| AAAATCTTCCGTGAACTCTA+TGG | + | chr6_1:52628218-52628237 | Msa0888320:intron | 35.0% | |
| TTCACATTCCATAGAGTTCA+CGG | - | chr6_1:52628229-52628248 | None:intergenic | 35.0% | |
| CTATGGAATGTGAAGTTACA+AGG | + | chr6_1:52628235-52628254 | Msa0888320:intron | 35.0% | |
| TAATTGTCACAATGGTCTAG+TGG | - | chr6_1:52628504-52628523 | None:intergenic | 35.0% | |
| TGAATTGGCTGATCTTATGA+AGG | + | chr6_1:52628809-52628828 | Msa0888320:CDS | 35.0% | |
| TAACAAATAACACACCCACT+TGG | - | chr6_1:52628909-52628928 | None:intergenic | 35.0% | |
| GAAACCCCAAAAACTAAAGA+AGG | - | chr6_1:52629013-52629032 | None:intergenic | 35.0% | |
| AGAAGTGAAGACTTAGAGAA+TGG | - | chr6_1:52629226-52629245 | None:intergenic | 35.0% | |
| ! | AACGACTCTTTTTAATGTGC+TGG | - | chr6_1:52629283-52629302 | None:intergenic | 35.0% |
| CATATCAGGCAAAAGATCAT+TGG | - | chr6_1:52629324-52629343 | None:intergenic | 35.0% | |
| ! | CAATGATCTTTTGCCTGATA+TGG | + | chr6_1:52629322-52629341 | Msa0888320:intron | 35.0% |
| CATAGGACAATAACCATATC+AGG | - | chr6_1:52629338-52629357 | None:intergenic | 35.0% | |
| GATTACCTTCATACTTGGAA+TGG | - | chr6_1:52629378-52629397 | None:intergenic | 35.0% | |
| !!! | TTTGTTTTTGTCTCTGCTTC+AGG | - | chr6_1:52629450-52629469 | None:intergenic | 35.0% |
| GAGCAATGGAATCAACAAAA+AGG | - | chr6_1:52629784-52629803 | None:intergenic | 35.0% | |
| GAAAGAACAAATGAGAGCAA+TGG | - | chr6_1:52629798-52629817 | None:intergenic | 35.0% | |
| CAGGACCATAGACAAAAATT+TGG | - | chr6_1:52629838-52629857 | None:intergenic | 35.0% | |
| TGTTTGTCATCATCAAAACG+GGG | - | chr6_1:52629965-52629984 | None:intergenic | 35.0% | |
| ! | TAAAGTACTATTGGACTCAG+GGG | - | chr6_1:52630062-52630081 | None:intergenic | 35.0% |
| ! | CTTAAAGTACTATTGGACTC+AGG | - | chr6_1:52630064-52630083 | None:intergenic | 35.0% |
| CTGAGTCCAATAGTACTTTA+AGG | + | chr6_1:52630062-52630081 | Msa0888320:intron | 35.0% | |
| !! | TCCAATAGTACTTTAAGGTG+AGG | + | chr6_1:52630067-52630086 | Msa0888320:intron | 35.0% |
| ! | ACCTCACCTTAAAGTACTAT+TGG | - | chr6_1:52630071-52630090 | None:intergenic | 35.0% |
| TAACATGGATAAAACTCAGG+GGG | - | chr6_1:52630103-52630122 | None:intergenic | 35.0% | |
| !!! | TTTTTCTTTTTCAGGGGTTG+AGG | + | chr6_1:52627978-52627997 | Msa0888320:intron | 35.0% |
| CCCGATGCAATCTTAAAAAT+TGG | + | chr6_1:52628092-52628111 | Msa0888320:intron | 35.0% | |
| AAAATCTTCCGTGAACTCTA+TGG | + | chr6_1:52628218-52628237 | Msa0888320:intron | 35.0% | |
| TTCACATTCCATAGAGTTCA+CGG | - | chr6_1:52628229-52628248 | None:intergenic | 35.0% | |
| CTATGGAATGTGAAGTTACA+AGG | + | chr6_1:52628235-52628254 | Msa0888320:intron | 35.0% | |
| TAATTGTCACAATGGTCTAG+TGG | - | chr6_1:52628504-52628523 | None:intergenic | 35.0% | |
| TGAATTGGCTGATCTTATGA+AGG | + | chr6_1:52628809-52628828 | Msa0888320:CDS | 35.0% | |
| TAACAAATAACACACCCACT+TGG | - | chr6_1:52628909-52628928 | None:intergenic | 35.0% | |
| GAAACCCCAAAAACTAAAGA+AGG | - | chr6_1:52629013-52629032 | None:intergenic | 35.0% | |
| AGAAGTGAAGACTTAGAGAA+TGG | - | chr6_1:52629226-52629245 | None:intergenic | 35.0% | |
| ! | AACGACTCTTTTTAATGTGC+TGG | - | chr6_1:52629283-52629302 | None:intergenic | 35.0% |
| CATATCAGGCAAAAGATCAT+TGG | - | chr6_1:52629324-52629343 | None:intergenic | 35.0% | |
| ! | CAATGATCTTTTGCCTGATA+TGG | + | chr6_1:52629322-52629341 | Msa0888320:intron | 35.0% |
| CATAGGACAATAACCATATC+AGG | - | chr6_1:52629338-52629357 | None:intergenic | 35.0% | |
| GATTACCTTCATACTTGGAA+TGG | - | chr6_1:52629378-52629397 | None:intergenic | 35.0% | |
| !!! | TTTGTTTTTGTCTCTGCTTC+AGG | - | chr6_1:52629450-52629469 | None:intergenic | 35.0% |
| GAGCAATGGAATCAACAAAA+AGG | - | chr6_1:52629784-52629803 | None:intergenic | 35.0% | |
| GAAAGAACAAATGAGAGCAA+TGG | - | chr6_1:52629798-52629817 | None:intergenic | 35.0% | |
| CAGGACCATAGACAAAAATT+TGG | - | chr6_1:52629838-52629857 | None:intergenic | 35.0% | |
| TGTTTGTCATCATCAAAACG+GGG | - | chr6_1:52629965-52629984 | None:intergenic | 35.0% | |
| ! | TAAAGTACTATTGGACTCAG+GGG | - | chr6_1:52630062-52630081 | None:intergenic | 35.0% |
| ! | CTTAAAGTACTATTGGACTC+AGG | - | chr6_1:52630064-52630083 | None:intergenic | 35.0% |
| CTGAGTCCAATAGTACTTTA+AGG | + | chr6_1:52630062-52630081 | Msa0888320:intron | 35.0% | |
| !! | TCCAATAGTACTTTAAGGTG+AGG | + | chr6_1:52630067-52630086 | Msa0888320:intron | 35.0% |
| ! | ACCTCACCTTAAAGTACTAT+TGG | - | chr6_1:52630071-52630090 | None:intergenic | 35.0% |
| TAACATGGATAAAACTCAGG+GGG | - | chr6_1:52630103-52630122 | None:intergenic | 35.0% | |
| !!! | TTTTTCTTTTTCAGGGGTTG+AGG | + | chr6_1:52627978-52627997 | Msa0888320:intron | 35.0% |
| CCCGATGCAATCTTAAAAAT+TGG | + | chr6_1:52628092-52628111 | Msa0888320:intron | 35.0% | |
| AAAATCTTCCGTGAACTCTA+TGG | + | chr6_1:52628218-52628237 | Msa0888320:intron | 35.0% | |
| TTCACATTCCATAGAGTTCA+CGG | - | chr6_1:52628229-52628248 | None:intergenic | 35.0% | |
| CTATGGAATGTGAAGTTACA+AGG | + | chr6_1:52628235-52628254 | Msa0888320:intron | 35.0% | |
| TAATTGTCACAATGGTCTAG+TGG | - | chr6_1:52628504-52628523 | None:intergenic | 35.0% | |
| TGAATTGGCTGATCTTATGA+AGG | + | chr6_1:52628809-52628828 | Msa0888320:CDS | 35.0% | |
| ATGTTGAACATAGGACAAGG+AGG | - | chr6_1:52626120-52626139 | None:intergenic | 40.0% | |
| TTTAGACCACTCACCATGTT+CGG | + | chr6_1:52626193-52626212 | Msa0888320:intron | 40.0% | |
| CCAGTTGAGCTAGAACTTAT+AGG | - | chr6_1:52626523-52626542 | None:intergenic | 40.0% | |
| !! | CCTATAAGTTCTAGCTCAAC+TGG | + | chr6_1:52626520-52626539 | Msa0888320:intron | 40.0% |
| TGGAAAATGCCGAAATTGCA+AGG | + | chr6_1:52626540-52626559 | Msa0888320:intron | 40.0% | |
| AAATGCCGAAATTGCAAGGT+CGG | + | chr6_1:52626544-52626563 | Msa0888320:intron | 40.0% | |
| !!! | TGGTCCCTTCCATTAGTTTT+CGG | + | chr6_1:52626774-52626793 | Msa0888320:intron | 40.0% |
| TATCTCTCCGTTTACCAAAG+TGG | - | chr6_1:52626972-52626991 | None:intergenic | 40.0% | |
| ! | CTGTTGTAGGACACAACTTT+TGG | - | chr6_1:52627117-52627136 | None:intergenic | 40.0% |
| ACACAGATCCTGTTAATGTC+AGG | + | chr6_1:52628046-52628065 | Msa0888320:intron | 40.0% | |
| CACAGATCCTGTTAATGTCA+GGG | + | chr6_1:52628047-52628066 | Msa0888320:intron | 40.0% | |
| TGGAATGTGAAGTTACAAGG+TGG | + | chr6_1:52628238-52628257 | Msa0888320:intron | 40.0% | |
| AATGTGAAGTTACAAGGTGG+AGG | + | chr6_1:52628241-52628260 | Msa0888320:intron | 40.0% | |
| AAAATTGGGCCCCCAAAATT+TGG | + | chr6_1:52628587-52628606 | Msa0888320:intron | 40.0% | |
| CTTCGACACAACATTAACCA+GGG | - | chr6_1:52628655-52628674 | None:intergenic | 40.0% | |
| ACTTCGACACAACATTAACC+AGG | - | chr6_1:52628656-52628675 | None:intergenic | 40.0% | |
| TATTACAGATCTGTGGAAGC+AGG | + | chr6_1:52628879-52628898 | Msa0888320:CDS | 40.0% | |
| ATTACAGATCTGTGGAAGCA+GGG | + | chr6_1:52628880-52628899 | Msa0888320:CDS | 40.0% | |
| CAAGTCCATTCCAAGTATGA+AGG | + | chr6_1:52629370-52629389 | Msa0888320:intron | 40.0% | |
| ! | TTCTGGTCTTCTGCAATGTT+GGG | + | chr6_1:52629580-52629599 | Msa0888320:intron | 40.0% |
| TTCTGATGAACTTCAGCTTC+TGG | + | chr6_1:52629650-52629669 | Msa0888320:intron | 40.0% | |
| GTGATATTCAGCTTCTGATG+AGG | + | chr6_1:52629672-52629691 | Msa0888320:intron | 40.0% | |
| TCCTGAAGTGATGACATCAT+CGG | - | chr6_1:52629718-52629737 | None:intergenic | 40.0% | |
| GTTTGTCATCATCAAAACGG+GGG | - | chr6_1:52629964-52629983 | None:intergenic | 40.0% | |
| ! | AAAGTACTATTGGACTCAGG+GGG | - | chr6_1:52630061-52630080 | None:intergenic | 40.0% |
| ACACAGATCCTGTTAATGTC+AGG | + | chr6_1:52628046-52628065 | Msa0888320:intron | 40.0% | |
| CACAGATCCTGTTAATGTCA+GGG | + | chr6_1:52628047-52628066 | Msa0888320:intron | 40.0% | |
| TGGAATGTGAAGTTACAAGG+TGG | + | chr6_1:52628238-52628257 | Msa0888320:intron | 40.0% | |
| AATGTGAAGTTACAAGGTGG+AGG | + | chr6_1:52628241-52628260 | Msa0888320:intron | 40.0% | |
| AAAATTGGGCCCCCAAAATT+TGG | + | chr6_1:52628587-52628606 | Msa0888320:intron | 40.0% | |
| CTTCGACACAACATTAACCA+GGG | - | chr6_1:52628655-52628674 | None:intergenic | 40.0% | |
| ACTTCGACACAACATTAACC+AGG | - | chr6_1:52628656-52628675 | None:intergenic | 40.0% | |
| TATTACAGATCTGTGGAAGC+AGG | + | chr6_1:52628879-52628898 | Msa0888320:CDS | 40.0% | |
| ATTACAGATCTGTGGAAGCA+GGG | + | chr6_1:52628880-52628899 | Msa0888320:CDS | 40.0% | |
| CAAGTCCATTCCAAGTATGA+AGG | + | chr6_1:52629370-52629389 | Msa0888320:intron | 40.0% | |
| ! | TTCTGGTCTTCTGCAATGTT+GGG | + | chr6_1:52629580-52629599 | Msa0888320:intron | 40.0% |
| TTCTGATGAACTTCAGCTTC+TGG | + | chr6_1:52629650-52629669 | Msa0888320:intron | 40.0% | |
| GTGATATTCAGCTTCTGATG+AGG | + | chr6_1:52629672-52629691 | Msa0888320:intron | 40.0% | |
| TCCTGAAGTGATGACATCAT+CGG | - | chr6_1:52629718-52629737 | None:intergenic | 40.0% | |
| GTTTGTCATCATCAAAACGG+GGG | - | chr6_1:52629964-52629983 | None:intergenic | 40.0% | |
| ! | AAAGTACTATTGGACTCAGG+GGG | - | chr6_1:52630061-52630080 | None:intergenic | 40.0% |
| ACACAGATCCTGTTAATGTC+AGG | + | chr6_1:52628046-52628065 | Msa0888320:intron | 40.0% | |
| CACAGATCCTGTTAATGTCA+GGG | + | chr6_1:52628047-52628066 | Msa0888320:intron | 40.0% | |
| TGGAATGTGAAGTTACAAGG+TGG | + | chr6_1:52628238-52628257 | Msa0888320:intron | 40.0% | |
| AATGTGAAGTTACAAGGTGG+AGG | + | chr6_1:52628241-52628260 | Msa0888320:intron | 40.0% | |
| AAAATTGGGCCCCCAAAATT+TGG | + | chr6_1:52628587-52628606 | Msa0888320:intron | 40.0% | |
| CTTCGACACAACATTAACCA+GGG | - | chr6_1:52628655-52628674 | None:intergenic | 40.0% | |
| ACTTCGACACAACATTAACC+AGG | - | chr6_1:52628656-52628675 | None:intergenic | 40.0% | |
| TATTACAGATCTGTGGAAGC+AGG | + | chr6_1:52628879-52628898 | Msa0888320:CDS | 40.0% | |
| ATTACAGATCTGTGGAAGCA+GGG | + | chr6_1:52628880-52628899 | Msa0888320:CDS | 40.0% | |
| CAAGTCCATTCCAAGTATGA+AGG | + | chr6_1:52629370-52629389 | Msa0888320:intron | 40.0% | |
| ! | TTCTGGTCTTCTGCAATGTT+GGG | + | chr6_1:52629580-52629599 | Msa0888320:intron | 40.0% |
| TTCTGATGAACTTCAGCTTC+TGG | + | chr6_1:52629650-52629669 | Msa0888320:intron | 40.0% | |
| GTGATATTCAGCTTCTGATG+AGG | + | chr6_1:52629672-52629691 | Msa0888320:intron | 40.0% | |
| TCCTGAAGTGATGACATCAT+CGG | - | chr6_1:52629718-52629737 | None:intergenic | 40.0% | |
| GTTTGTCATCATCAAAACGG+GGG | - | chr6_1:52629964-52629983 | None:intergenic | 40.0% | |
| ! | AAAGTACTATTGGACTCAGG+GGG | - | chr6_1:52630061-52630080 | None:intergenic | 40.0% |
| ACACAGATCCTGTTAATGTC+AGG | + | chr6_1:52628046-52628065 | Msa0888320:intron | 40.0% | |
| CACAGATCCTGTTAATGTCA+GGG | + | chr6_1:52628047-52628066 | Msa0888320:intron | 40.0% | |
| TGGAATGTGAAGTTACAAGG+TGG | + | chr6_1:52628238-52628257 | Msa0888320:intron | 40.0% | |
| AATGTGAAGTTACAAGGTGG+AGG | + | chr6_1:52628241-52628260 | Msa0888320:intron | 40.0% | |
| AAAATTGGGCCCCCAAAATT+TGG | + | chr6_1:52628587-52628606 | Msa0888320:intron | 40.0% | |
| CTTCGACACAACATTAACCA+GGG | - | chr6_1:52628655-52628674 | None:intergenic | 40.0% | |
| ACTTCGACACAACATTAACC+AGG | - | chr6_1:52628656-52628675 | None:intergenic | 40.0% | |
| TATTACAGATCTGTGGAAGC+AGG | + | chr6_1:52628879-52628898 | Msa0888320:CDS | 40.0% | |
| ATTACAGATCTGTGGAAGCA+GGG | + | chr6_1:52628880-52628899 | Msa0888320:CDS | 40.0% | |
| TAACAAATAGCACACCCACT+TGG | - | chr6_1:52635693-52635712 | None:intergenic | 40.0% | |
| ATAGGACAAGGAGGTTGTAG+GGG | - | chr6_1:52626111-52626130 | None:intergenic | 45.0% | |
| CATAGGACAAGGAGGTTGTA+GGG | - | chr6_1:52626112-52626131 | None:intergenic | 45.0% | |
| ACATAGGACAAGGAGGTTGT+AGG | - | chr6_1:52626113-52626132 | None:intergenic | 45.0% | |
| ACTAATGGAAGGGACCACTT+TGG | - | chr6_1:52626771-52626790 | None:intergenic | 45.0% | |
| GAAGGGACCACTTTGGTAAA+CGG | + | chr6_1:52626962-52626981 | Msa0888320:intron | 45.0% | |
| TACAGTTGCTAAGGAAGGTC+AGG | - | chr6_1:52627206-52627225 | None:intergenic | 45.0% | |
| TGGGTTACAGTTGCTAAGGA+AGG | - | chr6_1:52627211-52627230 | None:intergenic | 45.0% | |
| !! | CTAGTGGGTTACAGTTGCTA+AGG | - | chr6_1:52627215-52627234 | None:intergenic | 45.0% |
| AAAGCCATGAAGACGGTATC+TGG | + | chr6_1:52627574-52627593 | Msa0888320:CDS | 45.0% | |
| ! | GGCTGTTTCATTGGACATGA+AGG | + | chr6_1:52627999-52628018 | Msa0888320:CDS | 45.0% |
| CTAGTGGTAAACTGAAGCGA+TGG | - | chr6_1:52628488-52628507 | None:intergenic | 45.0% | |
| ! | ATCAGGGCCTCCAAATTTTG+GGG | - | chr6_1:52628600-52628619 | None:intergenic | 45.0% |
| ! | GATCAGGGCCTCCAAATTTT+GGG | - | chr6_1:52628601-52628620 | None:intergenic | 45.0% |
| GAAGGAGGAGCCAAAGAAAA+AGG | + | chr6_1:52628776-52628795 | Msa0888320:CDS | 45.0% | |
| ! | TAGCTGTTGCTTCACTCTTC+TGG | + | chr6_1:52629563-52629582 | Msa0888320:intron | 45.0% |
| ! | CTTCTGGTCTTCTGCAATGT+TGG | + | chr6_1:52629579-52629598 | Msa0888320:intron | 45.0% |
| TCCGATGATGTCATCACTTC+AGG | + | chr6_1:52629714-52629733 | Msa0888320:intron | 45.0% | |
| ATCAAAACGGGGGAGATTGT+TGG | - | chr6_1:52629954-52629973 | None:intergenic | 45.0% | |
| ! | GGCTGTTTCATTGGACATGA+AGG | + | chr6_1:52627999-52628018 | Msa0888320:CDS | 45.0% |
| CTAGTGGTAAACTGAAGCGA+TGG | - | chr6_1:52628488-52628507 | None:intergenic | 45.0% | |
| ! | ATCAGGGCCTCCAAATTTTG+GGG | - | chr6_1:52628600-52628619 | None:intergenic | 45.0% |
| ! | GATCAGGGCCTCCAAATTTT+GGG | - | chr6_1:52628601-52628620 | None:intergenic | 45.0% |
| GAAGGAGGAGCCAAAGAAAA+AGG | + | chr6_1:52628776-52628795 | Msa0888320:CDS | 45.0% | |
| ! | TAGCTGTTGCTTCACTCTTC+TGG | + | chr6_1:52629563-52629582 | Msa0888320:intron | 45.0% |
| ! | CTTCTGGTCTTCTGCAATGT+TGG | + | chr6_1:52629579-52629598 | Msa0888320:intron | 45.0% |
| TCCGATGATGTCATCACTTC+AGG | + | chr6_1:52629714-52629733 | Msa0888320:intron | 45.0% | |
| ATCAAAACGGGGGAGATTGT+TGG | - | chr6_1:52629954-52629973 | None:intergenic | 45.0% | |
| ! | GGCTGTTTCATTGGACATGA+AGG | + | chr6_1:52627999-52628018 | Msa0888320:CDS | 45.0% |
| CTAGTGGTAAACTGAAGCGA+TGG | - | chr6_1:52628488-52628507 | None:intergenic | 45.0% | |
| ! | ATCAGGGCCTCCAAATTTTG+GGG | - | chr6_1:52628600-52628619 | None:intergenic | 45.0% |
| ! | GATCAGGGCCTCCAAATTTT+GGG | - | chr6_1:52628601-52628620 | None:intergenic | 45.0% |
| GAAGGAGGAGCCAAAGAAAA+AGG | + | chr6_1:52628776-52628795 | Msa0888320:CDS | 45.0% | |
| ! | TAGCTGTTGCTTCACTCTTC+TGG | + | chr6_1:52629563-52629582 | Msa0888320:intron | 45.0% |
| ! | CTTCTGGTCTTCTGCAATGT+TGG | + | chr6_1:52629579-52629598 | Msa0888320:intron | 45.0% |
| TCCGATGATGTCATCACTTC+AGG | + | chr6_1:52629714-52629733 | Msa0888320:intron | 45.0% | |
| ATCAAAACGGGGGAGATTGT+TGG | - | chr6_1:52629954-52629973 | None:intergenic | 45.0% | |
| ! | GGCTGTTTCATTGGACATGA+AGG | + | chr6_1:52627999-52628018 | Msa0888320:CDS | 45.0% |
| CTAGTGGTAAACTGAAGCGA+TGG | - | chr6_1:52628488-52628507 | None:intergenic | 45.0% | |
| ! | ATCAGGGCCTCCAAATTTTG+GGG | - | chr6_1:52628600-52628619 | None:intergenic | 45.0% |
| ! | GATCAGGGCCTCCAAATTTT+GGG | - | chr6_1:52628601-52628620 | None:intergenic | 45.0% |
| GAAGGAGGAGCCAAAGAAAA+AGG | + | chr6_1:52628776-52628795 | Msa0888320:CDS | 45.0% | |
| !!! | AATTTTATTAAAAAATACAA+AGG | + | chr6_1:52627753-52627772 | Msa0888320:intron | 5.0% |
| !! | AATATATATTTAATATTGTA+AGG | + | chr6_1:52628544-52628563 | Msa0888320:intron | 5.0% |
| !! | AATATATATTTAATATTGTA+AGG | + | chr6_1:52628544-52628563 | Msa0888320:intron | 5.0% |
| !! | AATATATATTTAATATTGTA+AGG | + | chr6_1:52628544-52628563 | Msa0888320:intron | 5.0% |
| !! | AATATATATTTAATATTGTA+AGG | + | chr6_1:52628544-52628563 | Msa0888320:intron | 5.0% |
| ACAGAAAAGTCGGCCGAACA+TGG | - | chr6_1:52626209-52626228 | None:intergenic | 50.0% | |
| GACGTCCGACCTTGCAATTT+CGG | - | chr6_1:52626552-52626571 | None:intergenic | 50.0% | |
| ! | CATAACGGAAGGGACCACTT+TGG | + | chr6_1:52626955-52626974 | Msa0888320:intron | 50.0% |
| GAGACCAGATACCGTCTTCA+TGG | - | chr6_1:52627581-52627600 | None:intergenic | 50.0% | |
| AAGACGGTATCTGGTCTCTC+AGG | + | chr6_1:52627583-52627602 | Msa0888320:CDS | 50.0% | |
| ! | AGGGGTTGAGGCTGTTTCAT+TGG | + | chr6_1:52627990-52628009 | Msa0888320:intron | 50.0% |
| AAGACGGCCCTGACATTAAC+AGG | - | chr6_1:52628057-52628076 | None:intergenic | 50.0% | |
| CAGGGCCGTCTTAAACAATC+CGG | + | chr6_1:52628065-52628084 | Msa0888320:intron | 50.0% | |
| GGCCTCCGGATTGTTTAAGA+CGG | - | chr6_1:52628073-52628092 | None:intergenic | 50.0% | |
| GATGGTATCCTTGCAGGTGT+GGG | - | chr6_1:52628470-52628489 | None:intergenic | 50.0% | |
| TGAAGCGATGGTATCCTTGC+AGG | - | chr6_1:52628476-52628495 | None:intergenic | 50.0% | |
| ATTGGGCCCCCAAAATTTGG+AGG | + | chr6_1:52628590-52628609 | Msa0888320:intron | 50.0% | |
| ! | TCAGGGCCTCCAAATTTTGG+GGG | - | chr6_1:52628599-52628618 | None:intergenic | 50.0% |
| ! | GGATCAGGGCCTCCAAATTT+TGG | - | chr6_1:52628602-52628621 | None:intergenic | 50.0% |
| AATTTGGAGGCCCTGATCCA+TGG | + | chr6_1:52628603-52628622 | Msa0888320:intron | 50.0% | |
| ATTTGGAGGCCCTGATCCAT+GGG | + | chr6_1:52628604-52628623 | Msa0888320:intron | 50.0% | |
| GACACAACATTAACCAGGGC+CGG | - | chr6_1:52628651-52628670 | None:intergenic | 50.0% | |
| !! | CTTCAGGAGCACTTGACTTC+AGG | + | chr6_1:52629730-52629749 | Msa0888320:intron | 50.0% |
| ! | AGGGGTTGAGGCTGTTTCAT+TGG | + | chr6_1:52627990-52628009 | Msa0888320:intron | 50.0% |
| AAGACGGCCCTGACATTAAC+AGG | - | chr6_1:52628057-52628076 | None:intergenic | 50.0% | |
| CAGGGCCGTCTTAAACAATC+CGG | + | chr6_1:52628065-52628084 | Msa0888320:intron | 50.0% | |
| GGCCTCCGGATTGTTTAAGA+CGG | - | chr6_1:52628073-52628092 | None:intergenic | 50.0% | |
| ATTGGGCCCCCAAAATTTGG+AGG | + | chr6_1:52628590-52628609 | Msa0888320:intron | 50.0% | |
| ! | TCAGGGCCTCCAAATTTTGG+GGG | - | chr6_1:52628599-52628618 | None:intergenic | 50.0% |
| ! | GGATCAGGGCCTCCAAATTT+TGG | - | chr6_1:52628602-52628621 | None:intergenic | 50.0% |
| AATTTGGAGGCCCTGATCCA+TGG | + | chr6_1:52628603-52628622 | Msa0888320:intron | 50.0% | |
| ATTTGGAGGCCCTGATCCAT+GGG | + | chr6_1:52628604-52628623 | Msa0888320:intron | 50.0% | |
| GACACAACATTAACCAGGGC+CGG | - | chr6_1:52628651-52628670 | None:intergenic | 50.0% | |
| !! | CTTCAGGAGCACTTGACTTC+AGG | + | chr6_1:52629730-52629749 | Msa0888320:intron | 50.0% |
| ! | AGGGGTTGAGGCTGTTTCAT+TGG | + | chr6_1:52627990-52628009 | Msa0888320:intron | 50.0% |
| AAGACGGCCCTGACATTAAC+AGG | - | chr6_1:52628057-52628076 | None:intergenic | 50.0% | |
| CAGGGCCGTCTTAAACAATC+CGG | + | chr6_1:52628065-52628084 | Msa0888320:intron | 50.0% | |
| GGCCTCCGGATTGTTTAAGA+CGG | - | chr6_1:52628073-52628092 | None:intergenic | 50.0% | |
| ATTGGGCCCCCAAAATTTGG+AGG | + | chr6_1:52628590-52628609 | Msa0888320:intron | 50.0% | |
| ! | TCAGGGCCTCCAAATTTTGG+GGG | - | chr6_1:52628599-52628618 | None:intergenic | 50.0% |
| ! | GGATCAGGGCCTCCAAATTT+TGG | - | chr6_1:52628602-52628621 | None:intergenic | 50.0% |
| AATTTGGAGGCCCTGATCCA+TGG | + | chr6_1:52628603-52628622 | Msa0888320:intron | 50.0% | |
| ATTTGGAGGCCCTGATCCAT+GGG | + | chr6_1:52628604-52628623 | Msa0888320:intron | 50.0% | |
| GACACAACATTAACCAGGGC+CGG | - | chr6_1:52628651-52628670 | None:intergenic | 50.0% | |
| !! | CTTCAGGAGCACTTGACTTC+AGG | + | chr6_1:52629730-52629749 | Msa0888320:intron | 50.0% |
| ! | AGGGGTTGAGGCTGTTTCAT+TGG | + | chr6_1:52627990-52628009 | Msa0888320:intron | 50.0% |
| AAGACGGCCCTGACATTAAC+AGG | - | chr6_1:52628057-52628076 | None:intergenic | 50.0% | |
| CAGGGCCGTCTTAAACAATC+CGG | + | chr6_1:52628065-52628084 | Msa0888320:intron | 50.0% | |
| GGCCTCCGGATTGTTTAAGA+CGG | - | chr6_1:52628073-52628092 | None:intergenic | 50.0% | |
| ATTGGGCCCCCAAAATTTGG+AGG | + | chr6_1:52628590-52628609 | Msa0888320:intron | 50.0% | |
| ! | TCAGGGCCTCCAAATTTTGG+GGG | - | chr6_1:52628599-52628618 | None:intergenic | 50.0% |
| ! | GGATCAGGGCCTCCAAATTT+TGG | - | chr6_1:52628602-52628621 | None:intergenic | 50.0% |
| AATTTGGAGGCCCTGATCCA+TGG | + | chr6_1:52628603-52628622 | Msa0888320:intron | 50.0% | |
| ATTTGGAGGCCCTGATCCAT+GGG | + | chr6_1:52628604-52628623 | Msa0888320:intron | 50.0% | |
| GACACAACATTAACCAGGGC+CGG | - | chr6_1:52628651-52628670 | None:intergenic | 50.0% | |
| AGGCCGACGCACAGAAAAGT+CGG | - | chr6_1:52626219-52626238 | None:intergenic | 55.0% | |
| TGAAGTCCCGAGTTCGAACC+CGG | - | chr6_1:52626580-52626599 | None:intergenic | 55.0% | |
| GGCCGTCTTAAACAATCCGG+AGG | + | chr6_1:52628068-52628087 | Msa0888320:intron | 55.0% | |
| TAAGATTGCATCGGGGCCTC+CGG | - | chr6_1:52628087-52628106 | None:intergenic | 55.0% | |
| GAGTTGAACCCACACCTGCA+AGG | + | chr6_1:52628459-52628478 | Msa0888320:intron | 55.0% | |
| CGATGGTATCCTTGCAGGTG+TGG | - | chr6_1:52628471-52628490 | None:intergenic | 55.0% | |
| GGCCTGGATGCTCTTGCTTT+GGG | + | chr6_1:52628625-52628644 | Msa0888320:intron | 55.0% | |
| ! | TGGATGCTCTTGCTTTGGGC+CGG | + | chr6_1:52628629-52628648 | Msa0888320:intron | 55.0% |
| TGGAAGCAGGGTCTCCAAGT+GGG | + | chr6_1:52628892-52628911 | Msa0888320:intron | 55.0% | |
| GGCCGTCTTAAACAATCCGG+AGG | + | chr6_1:52628068-52628087 | Msa0888320:intron | 55.0% | |
| TAAGATTGCATCGGGGCCTC+CGG | - | chr6_1:52628087-52628106 | None:intergenic | 55.0% | |
| GGCCTGGATGCTCTTGCTTT+GGG | + | chr6_1:52628625-52628644 | Msa0888320:intron | 55.0% | |
| ! | TGGATGCTCTTGCTTTGGGC+CGG | + | chr6_1:52628629-52628648 | Msa0888320:intron | 55.0% |
| TGGAAGCAGGGTCTCCAAGT+GGG | + | chr6_1:52628892-52628911 | Msa0888320:intron | 55.0% | |
| GGCCGTCTTAAACAATCCGG+AGG | + | chr6_1:52628068-52628087 | Msa0888320:intron | 55.0% | |
| TAAGATTGCATCGGGGCCTC+CGG | - | chr6_1:52628087-52628106 | None:intergenic | 55.0% | |
| GGCCTGGATGCTCTTGCTTT+GGG | + | chr6_1:52628625-52628644 | Msa0888320:intron | 55.0% | |
| ! | TGGATGCTCTTGCTTTGGGC+CGG | + | chr6_1:52628629-52628648 | Msa0888320:intron | 55.0% |
| TGGAAGCAGGGTCTCCAAGT+GGG | + | chr6_1:52628892-52628911 | Msa0888320:intron | 55.0% | |
| GGCCGTCTTAAACAATCCGG+AGG | + | chr6_1:52628068-52628087 | Msa0888320:intron | 55.0% | |
| TAAGATTGCATCGGGGCCTC+CGG | - | chr6_1:52628087-52628106 | None:intergenic | 55.0% | |
| GGCCTGGATGCTCTTGCTTT+GGG | + | chr6_1:52628625-52628644 | Msa0888320:intron | 55.0% | |
| ! | TGGATGCTCTTGCTTTGGGC+CGG | + | chr6_1:52628629-52628648 | Msa0888320:intron | 55.0% |
| TGGAAGCAGGGTCTCCAAGT+GGG | + | chr6_1:52628892-52628911 | Msa0888320:intron | 55.0% | |
| AGTCGGCCGAACATGGTGAG+TGG | - | chr6_1:52626202-52626221 | None:intergenic | 60.0% | |
| !! | CGGCCGACTTTTCTGTGCGT+CGG | + | chr6_1:52626213-52626232 | Msa0888320:intron | 60.0% |
| TCGTGACCCGGGTTCGAACT+CGG | + | chr6_1:52626570-52626589 | Msa0888320:intron | 60.0% | |
| GAAGTCCCGAGTTCGAACCC+GGG | - | chr6_1:52626579-52626598 | None:intergenic | 60.0% | |
| GCATCCAGGCCCATGGATCA+GGG | - | chr6_1:52628616-52628635 | None:intergenic | 60.0% | |
| AGCATCCAGGCCCATGGATC+AGG | - | chr6_1:52628617-52628636 | None:intergenic | 60.0% | |
| !! | AGCAAGAGCATCCAGGCCCA+TGG | - | chr6_1:52628623-52628642 | None:intergenic | 60.0% |
| GGGCCTGGATGCTCTTGCTT+TGG | + | chr6_1:52628624-52628643 | Msa0888320:intron | 60.0% | |
| !! | GGCCCAAAGCAAGAGCATCC+AGG | - | chr6_1:52628630-52628649 | None:intergenic | 60.0% |
| GTGGAAGCAGGGTCTCCAAG+TGG | + | chr6_1:52628891-52628910 | Msa0888320:intron | 60.0% | |
| GCATCCAGGCCCATGGATCA+GGG | - | chr6_1:52628616-52628635 | None:intergenic | 60.0% | |
| AGCATCCAGGCCCATGGATC+AGG | - | chr6_1:52628617-52628636 | None:intergenic | 60.0% | |
| !! | AGCAAGAGCATCCAGGCCCA+TGG | - | chr6_1:52628623-52628642 | None:intergenic | 60.0% |
| GGGCCTGGATGCTCTTGCTT+TGG | + | chr6_1:52628624-52628643 | Msa0888320:intron | 60.0% | |
| !! | GGCCCAAAGCAAGAGCATCC+AGG | - | chr6_1:52628630-52628649 | None:intergenic | 60.0% |
| GTGGAAGCAGGGTCTCCAAG+TGG | + | chr6_1:52628891-52628910 | Msa0888320:intron | 60.0% | |
| GCATCCAGGCCCATGGATCA+GGG | - | chr6_1:52628616-52628635 | None:intergenic | 60.0% | |
| AGCATCCAGGCCCATGGATC+AGG | - | chr6_1:52628617-52628636 | None:intergenic | 60.0% | |
| !! | AGCAAGAGCATCCAGGCCCA+TGG | - | chr6_1:52628623-52628642 | None:intergenic | 60.0% |
| GGGCCTGGATGCTCTTGCTT+TGG | + | chr6_1:52628624-52628643 | Msa0888320:intron | 60.0% | |
| !! | GGCCCAAAGCAAGAGCATCC+AGG | - | chr6_1:52628630-52628649 | None:intergenic | 60.0% |
| GTGGAAGCAGGGTCTCCAAG+TGG | + | chr6_1:52628891-52628910 | Msa0888320:intron | 60.0% | |
| GCATCCAGGCCCATGGATCA+GGG | - | chr6_1:52628616-52628635 | None:intergenic | 60.0% | |
| AGCATCCAGGCCCATGGATC+AGG | - | chr6_1:52628617-52628636 | None:intergenic | 60.0% | |
| !! | AGCAAGAGCATCCAGGCCCA+TGG | - | chr6_1:52628623-52628642 | None:intergenic | 60.0% |
| GGGCCTGGATGCTCTTGCTT+TGG | + | chr6_1:52628624-52628643 | Msa0888320:intron | 60.0% | |
| !! | GGCCCAAAGCAAGAGCATCC+AGG | - | chr6_1:52628630-52628649 | None:intergenic | 60.0% |
| GTGGAAGCAGGGTCTCCAAG+TGG | + | chr6_1:52628891-52628910 | Msa0888320:intron | 60.0% | |
| CAAGGTCGGACGTCGTGACC+CGG | + | chr6_1:52626558-52626577 | Msa0888320:intron | 65.0% | |
| AAGGTCGGACGTCGTGACCC+GGG | + | chr6_1:52626559-52626578 | Msa0888320:intron | 65.0% | |
| CGTGACCCGGGTTCGAACTC+GGG | + | chr6_1:52626571-52626590 | Msa0888320:intron | 65.0% | |
| GAGGCCCTGATCCATGGGCC+TGG | + | chr6_1:52628609-52628628 | Msa0888320:intron | 70.0% | |
| ! | CTCTTGCTTTGGGCCGGCCC+TGG | + | chr6_1:52628635-52628654 | Msa0888320:intron | 70.0% |
| GAGGCCCTGATCCATGGGCC+TGG | + | chr6_1:52628609-52628628 | Msa0888320:intron | 70.0% | |
| ! | CTCTTGCTTTGGGCCGGCCC+TGG | + | chr6_1:52628635-52628654 | Msa0888320:intron | 70.0% |
| GAGGCCCTGATCCATGGGCC+TGG | + | chr6_1:52628609-52628628 | Msa0888320:intron | 70.0% | |
| ! | CTCTTGCTTTGGGCCGGCCC+TGG | + | chr6_1:52628635-52628654 | Msa0888320:intron | 70.0% |
| GAGGCCCTGATCCATGGGCC+TGG | + | chr6_1:52628609-52628628 | Msa0888320:intron | 70.0% | |
| ! | CTCTTGCTTTGGGCCGGCCC+TGG | + | chr6_1:52628635-52628654 | Msa0888320:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 52626056 | 52635713 | 52626056 | ID=Msa0888320;Name=Msa0888320 |
| chr6_1 | mRNA | 52626056 | 52635713 | 52626056 | ID=Msa0888320-mRNA-1;Parent=Msa0888320;Name=Msa0888320-mRNA-1;_AED=0.32;_eAED=0.33;_QI=0|0|0|0.6|1|1|10|0|469 |
| chr6_1 | exon | 52626056 | 52626145 | 52626056 | ID=Msa0888320-mRNA-1:exon:10596;Parent=Msa0888320-mRNA-1 |
| chr6_1 | exon | 52627529 | 52627604 | 52627529 | ID=Msa0888320-mRNA-1:exon:10597;Parent=Msa0888320-mRNA-1 |
| chr6_1 | exon | 52627992 | 52628062 | 52627992 | ID=Msa0888320-mRNA-1:exon:10598;Parent=Msa0888320-mRNA-1 |
| chr6_1 | exon | 52628675 | 52628909 | 52628675 | ID=Msa0888320-mRNA-1:exon:10599;Parent=Msa0888320-mRNA-1 |
| chr6_1 | exon | 52630231 | 52630301 | 52630231 | ID=Msa0888320-mRNA-1:exon:10600;Parent=Msa0888320-mRNA-1 |
| chr6_1 | exon | 52630936 | 52631170 | 52630936 | ID=Msa0888320-mRNA-1:exon:10601;Parent=Msa0888320-mRNA-1 |
| chr6_1 | exon | 52632493 | 52632563 | 52632493 | ID=Msa0888320-mRNA-1:exon:10602;Parent=Msa0888320-mRNA-1 |
| chr6_1 | exon | 52633198 | 52633432 | 52633198 | ID=Msa0888320-mRNA-1:exon:10603;Parent=Msa0888320-mRNA-1 |
| chr6_1 | exon | 52634754 | 52634824 | 52634754 | ID=Msa0888320-mRNA-1:exon:10604;Parent=Msa0888320-mRNA-1 |
| chr6_1 | exon | 52635459 | 52635713 | 52635459 | ID=Msa0888320-mRNA-1:exon:10605;Parent=Msa0888320-mRNA-1 |
| chr6_1 | CDS | 52626056 | 52626145 | 52626056 | ID=Msa0888320-mRNA-1:cds;Parent=Msa0888320-mRNA-1 |
| chr6_1 | CDS | 52627529 | 52627604 | 52627529 | ID=Msa0888320-mRNA-1:cds;Parent=Msa0888320-mRNA-1 |
| chr6_1 | CDS | 52627992 | 52628062 | 52627992 | ID=Msa0888320-mRNA-1:cds;Parent=Msa0888320-mRNA-1 |
| chr6_1 | CDS | 52628675 | 52628909 | 52628675 | ID=Msa0888320-mRNA-1:cds;Parent=Msa0888320-mRNA-1 |
| chr6_1 | CDS | 52630231 | 52630301 | 52630231 | ID=Msa0888320-mRNA-1:cds;Parent=Msa0888320-mRNA-1 |
| chr6_1 | CDS | 52630936 | 52631170 | 52630936 | ID=Msa0888320-mRNA-1:cds;Parent=Msa0888320-mRNA-1 |
| chr6_1 | CDS | 52632493 | 52632563 | 52632493 | ID=Msa0888320-mRNA-1:cds;Parent=Msa0888320-mRNA-1 |
| chr6_1 | CDS | 52633198 | 52633432 | 52633198 | ID=Msa0888320-mRNA-1:cds;Parent=Msa0888320-mRNA-1 |
| chr6_1 | CDS | 52634754 | 52634824 | 52634754 | ID=Msa0888320-mRNA-1:cds;Parent=Msa0888320-mRNA-1 |
| chr6_1 | CDS | 52635459 | 52635713 | 52635459 | ID=Msa0888320-mRNA-1:cds;Parent=Msa0888320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
