AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1343820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1343820 MtrunA17_Chr6g0461641 95.466 397 18 0 1 397 1 397 0.0 741
Msa1343820 MtrunA17_Chr2g0321461 49.213 445 121 15 1 396 1 389 2.25e-113 336
Msa1343820 MtrunA17_Chr5g0417521 51.759 199 84 3 35 229 8 198 9.14e-59 195
Msa1343820 MtrunA17_Chr4g0042451 50.754 199 87 4 35 229 10 201 6.74e-56 187
Msa1343820 MtrunA17_Chr8g0356501 52.907 172 58 3 32 198 27 180 4.56e-51 174
Msa1343820 MtrunA17_Chr5g0409731 48.500 200 83 3 24 216 7 193 1.97e-50 171
Msa1343820 MtrunA17_Chr2g0310011 53.529 170 52 4 15 180 14 160 6.91e-47 164
Msa1343820 MtrunA17_Chr7g0254981 41.485 229 114 6 9 232 15 228 4.88e-45 157
Msa1343820 MtrunA17_Chr7g0261911 47.283 184 72 5 4 186 231 390 2.05e-43 157
Msa1343820 MtrunA17_Chr2g0290991 43.646 181 96 3 23 202 19 194 8.76e-41 146
Msa1343820 MtrunA17_Chr7g0274471 53.020 149 54 3 41 189 217 349 2.21e-40 148
Msa1343820 MtrunA17_Chr2g0291021 48.193 166 72 3 27 192 34 185 4.63e-40 145
Msa1343820 MtrunA17_Chr1g0190301 48.193 166 56 4 28 186 161 303 1.36e-39 145
Msa1343820 MtrunA17_Chr1g0197171 35.379 277 142 7 17 270 24 286 3.40e-39 142
Msa1343820 MtrunA17_Chr1g0175091 43.889 180 79 3 27 202 239 400 2.71e-38 142
Msa1343820 MtrunA17_Chr7g0258551 45.098 153 65 3 41 192 211 345 2.01e-36 137
Msa1343820 MtrunA17_Chr7g0242521 44.828 145 60 4 42 183 13 140 2.63e-28 111
Msa1343820 MtrunA17_Chr1g0175071 35.673 171 85 3 30 196 165 314 2.74e-25 104
Msa1343820 MtrunA17_Chr1g0175081 53.968 63 29 0 38 100 18 80 2.06e-20 85.5
Msa1343820 MtrunA17_Chr7g0243081 47.126 87 35 1 20 95 38 124 2.44e-18 85.5
Msa1343820 MtrunA17_Chr2g0320231 54.167 72 31 1 24 95 81 150 2.96e-17 82.8
Msa1343820 MtrunA17_Chr2g0288601 66.000 50 17 0 43 92 72 121 3.26e-17 77.4
Msa1343820 MtrunA17_Chr1g0210911 55.882 68 30 0 43 110 23 90 5.90e-17 81.3
Msa1343820 MtrunA17_Chr3g0095611 49.333 75 30 2 42 116 19 85 6.08e-17 79.0
Msa1343820 MtrunA17_Chr8g0379121 62.264 53 20 0 43 95 112 164 1.78e-16 80.9
Msa1343820 MtrunA17_Chr1g0162931 60.000 60 21 1 43 102 19 75 1.82e-16 79.0
Msa1343820 MtrunA17_Chr4g0009901 55.072 69 29 2 29 96 154 221 2.07e-16 79.0
Msa1343820 MtrunA17_Chr6g0479431 60.377 53 21 0 43 95 203 255 5.68e-15 75.9
Msa1343820 MtrunA17_Chr7g0258531 35.000 140 76 2 41 180 212 336 6.73e-15 75.5
Msa1343820 MtrunA17_Chr4g0009981 59.259 54 21 1 42 95 116 168 1.08e-14 73.6
Msa1343820 MtrunA17_Chr5g0410741 54.237 59 27 0 43 101 220 278 2.16e-14 74.3
Msa1343820 MtrunA17_Chr3g0109981 54.237 59 27 0 43 101 275 333 2.88e-14 74.3
Msa1343820 MtrunA17_Chr8g0366281 60.377 53 21 0 43 95 174 226 3.08e-14 73.6
Msa1343820 MtrunA17_Chr4g0067981 39.216 102 60 2 38 138 211 311 3.43e-14 74.3
Msa1343820 MtrunA17_Chr1g0154261 52.542 59 28 0 43 101 127 185 3.94e-14 72.4
Msa1343820 MtrunA17_Chr2g0283951 55.172 58 25 1 43 99 90 147 4.83e-14 73.2
Msa1343820 MtrunA17_Chr2g0304841 54.237 59 26 1 38 96 209 266 6.70e-14 73.6
Msa1343820 MtrunA17_Chr2g0294911 51.667 60 28 1 37 96 206 264 1.07e-13 72.8
Msa1343820 MtrunA17_Chr4g0009851 57.407 54 22 1 42 95 169 221 1.07e-13 71.2
Msa1343820 MtrunA17_Chr1g0161431 45.455 77 33 2 38 106 196 271 1.15e-13 72.8
Msa1343820 MtrunA17_Chr7g0275401 41.441 111 54 5 42 150 192 293 1.31e-13 70.9
Msa1343820 MtrunA17_Chr1g0198601 48.529 68 35 0 42 109 211 278 7.04e-13 69.3
Msa1343820 MtrunA17_Chr4g0009991 56.863 51 21 1 42 92 67 116 8.59e-13 65.1
Msa1343820 MtrunA17_Chr4g0031961 47.222 72 36 2 39 109 128 198 1.11e-12 68.6
Msa1343820 MtrunA17_Chr4g0062921 53.448 58 27 0 39 96 232 289 1.82e-12 68.6
Msa1343820 MtrunA17_Chr7g0255711 54.545 55 24 1 42 96 91 144 2.90e-12 67.0
Msa1343820 MtrunA17_Chr4g0040481 54.386 57 25 1 42 98 158 213 2.92e-12 67.8
Msa1343820 MtrunA17_Chr4g0045361 44.000 75 41 1 39 112 271 345 3.30e-12 67.8
Msa1343820 MtrunA17_Chr1g0149841 56.364 55 23 1 42 96 191 244 3.43e-12 67.8
Msa1343820 MtrunA17_Chr2g0324891 54.545 55 24 1 44 98 163 216 4.18e-12 67.4
Msa1343820 MtrunA17_Chr8g0376881 53.448 58 26 1 42 99 209 265 1.37e-11 66.2
Msa1343820 MtrunA17_Chr4g0074401 51.667 60 28 1 38 97 199 257 2.36e-11 65.5
Msa1343820 MtrunA17_Chr5g0402631 52.727 55 26 0 42 96 214 268 2.49e-11 64.7
Msa1343820 MtrunA17_Chr3g0137101 49.153 59 29 1 38 96 194 251 2.79e-11 65.1
Msa1343820 MtrunA17_Chr3g0123131 48.387 62 31 1 38 99 195 255 3.35e-11 65.1
Msa1343820 MtrunA17_Chr6g0471041 50.000 56 27 1 42 97 172 226 6.55e-11 63.5
Msa1343820 MtrunA17_Chr4g0074411 51.667 60 28 1 38 97 197 255 8.17e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1343820 AT3G04030.3 49.057 424 158 12 1 396 1 394 9.27e-114 338
Msa1343820 AT3G04030.2 48.585 424 159 13 1 396 1 393 1.48e-110 330
Msa1343820 AT5G18240.1 46.479 426 174 9 1 396 1 402 4.69e-109 326
Msa1343820 AT5G18240.4 46.479 426 174 9 1 396 1 402 4.69e-109 326
Msa1343820 AT3G04030.1 47.642 424 158 13 1 396 1 388 1.68e-106 319
Msa1343820 AT5G18240.5 46.009 426 174 10 1 396 1 400 9.73e-106 318
Msa1343820 AT5G18240.2 45.070 426 174 10 1 396 1 396 1.12e-101 307
Msa1343820 AT5G18240.3 45.070 426 174 10 1 396 1 396 1.12e-101 307
Msa1343820 AT3G04030.5 45.349 344 141 9 74 396 1 318 9.58e-77 240
Msa1343820 AT3G04030.4 43.605 344 141 10 74 396 1 312 1.56e-69 222
Msa1343820 AT5G18240.6 40.922 347 154 7 74 396 1 320 1.29e-65 212
Msa1343820 AT4G13640.1 52.356 191 87 1 26 216 21 207 1.01e-60 198
Msa1343820 AT1G69580.1 52.857 210 86 2 28 230 20 223 1.72e-60 199
Msa1343820 AT1G69580.2 52.607 211 86 2 28 230 20 224 2.35e-60 199
Msa1343820 AT3G24120.1 52.577 194 88 1 26 219 25 214 3.57e-60 197
Msa1343820 AT4G13640.2 51.546 194 87 2 26 216 21 210 1.19e-58 193
Msa1343820 AT3G24120.2 51.777 197 88 2 26 219 25 217 4.43e-58 192
Msa1343820 AT1G79430.2 53.892 167 60 3 32 196 24 175 1.13e-51 177
Msa1343820 AT5G45580.2 46.237 186 74 3 26 197 7 180 6.44e-46 159
Msa1343820 AT5G45580.1 46.591 176 68 3 36 197 1 164 1.59e-43 152
Msa1343820 AT2G01060.1 48.503 167 64 3 41 206 14 159 5.97e-42 149
Msa1343820 AT3G12730.1 47.205 161 75 2 31 190 12 163 1.29e-41 147
Msa1343820 AT5G29000.1 50.000 146 60 2 41 186 187 319 2.21e-40 147
Msa1343820 AT5G29000.3 50.000 146 60 2 41 186 187 319 2.21e-40 147
Msa1343820 AT5G29000.2 50.000 146 60 2 41 186 230 362 4.56e-40 147
Msa1343820 AT4G28610.1 50.676 148 54 3 41 186 224 354 1.86e-39 145
Msa1343820 AT3G04450.4 43.931 173 81 3 14 186 173 329 1.66e-38 143
Msa1343820 AT3G04450.2 43.931 173 81 3 14 186 173 329 1.66e-38 143
Msa1343820 AT3G04450.1 43.931 173 81 3 14 186 213 369 3.58e-38 143
Msa1343820 AT5G06800.1 44.022 184 77 4 42 222 192 352 1.55e-36 137
Msa1343820 AT5G06800.2 44.920 187 76 6 42 222 192 357 2.07e-36 137
Msa1343820 AT3G13040.3 49.342 152 65 3 42 193 241 380 4.20e-34 132
Msa1343820 AT3G13040.1 49.342 152 65 3 42 193 241 380 4.20e-34 132
Msa1343820 AT3G13040.2 49.342 152 65 3 42 193 241 380 4.20e-34 132
Msa1343820 AT2G20400.2 44.586 157 65 3 44 200 233 367 9.13e-33 127
Msa1343820 AT2G20400.1 43.949 157 65 3 44 200 233 366 1.42e-31 124
Msa1343820 AT1G79430.1 46.400 125 50 3 74 196 1 110 2.11e-25 105
Msa1343820 AT2G01060.2 44.275 131 51 3 77 206 1 110 1.90e-23 98.2
Msa1343820 AT3G04450.3 52.941 85 37 1 14 98 213 294 3.76e-23 99.4
Msa1343820 AT5G29000.4 68.966 58 18 0 41 98 230 287 1.65e-22 97.4
Msa1343820 AT5G06800.3 47.368 95 43 1 6 100 163 250 1.21e-21 94.4
Msa1343820 AT2G06020.1 46.988 83 40 2 27 105 68 150 9.76e-18 83.6
Msa1343820 AT1G14600.1 64.286 56 20 0 43 98 24 79 1.32e-17 82.4
Msa1343820 AT2G42660.1 62.264 53 20 0 43 95 51 103 3.58e-17 81.3
Msa1343820 AT4G04605.1 62.264 53 20 0 43 95 15 67 4.85e-17 80.1
Msa1343820 AT3G12730.2 38.983 118 62 2 74 190 1 109 5.96e-17 78.6
Msa1343820 AT2G02060.2 64.151 53 19 0 43 95 30 82 9.90e-17 79.7
Msa1343820 AT2G02060.1 64.151 53 19 0 43 95 30 82 9.90e-17 79.7
Msa1343820 AT2G38300.1 62.264 53 20 0 43 95 55 107 1.18e-16 80.9
Msa1343820 AT2G40260.1 62.264 53 20 0 43 95 83 135 2.59e-16 80.5
Msa1343820 AT5G42630.2 39.655 116 63 4 2 116 69 178 3.17e-15 74.7
Msa1343820 AT5G16560.1 55.932 59 26 0 43 101 220 278 3.26e-15 77.0
Msa1343820 AT4G04580.1 56.604 53 23 0 43 95 15 67 5.29e-15 72.8
Msa1343820 AT5G42630.1 45.263 95 46 3 2 95 69 158 9.34e-15 74.3
Msa1343820 AT1G32240.1 37.168 113 51 3 2 111 188 283 1.26e-14 75.5
Msa1343820 AT1G32240.2 37.168 113 51 3 2 111 188 283 1.32e-14 75.1
Msa1343820 AT4G17695.1 47.500 80 41 1 43 121 165 244 1.87e-14 74.3
Msa1343820 AT3G46640.3 45.556 90 45 3 21 109 125 211 3.87e-14 73.2
Msa1343820 AT3G46640.2 45.556 90 45 3 21 109 125 211 5.88e-14 72.8
Msa1343820 AT3G46640.1 45.556 90 45 3 21 109 125 211 5.88e-14 72.8
Msa1343820 AT3G16857.3 58.182 55 22 1 42 96 167 220 6.28e-14 73.9
Msa1343820 AT3G16857.1 58.182 55 22 1 42 96 237 290 6.36e-14 73.9
Msa1343820 AT3G16857.2 58.182 55 22 1 42 96 237 290 7.27e-14 73.9
Msa1343820 AT2G40970.1 46.753 77 35 2 25 96 83 158 5.74e-13 68.9
Msa1343820 AT5G59570.2 51.724 58 27 1 39 96 138 194 1.02e-12 68.6
Msa1343820 AT5G59570.1 51.724 58 27 1 39 96 138 194 1.02e-12 68.6
Msa1343820 AT5G05090.1 54.545 55 24 1 42 96 81 134 1.21e-12 68.2
Msa1343820 AT3G10760.1 54.545 55 24 1 42 96 105 158 1.91e-12 68.2
Msa1343820 AT2G03500.1 51.724 58 28 0 39 96 230 287 2.96e-12 68.2
Msa1343820 AT5G58080.1 51.471 68 32 1 29 96 181 247 3.07e-12 68.6
Msa1343820 AT2G20570.1 56.140 57 24 1 42 98 153 208 4.47e-12 67.8
Msa1343820 AT2G20570.2 56.364 55 23 1 44 98 171 224 5.27e-12 67.4
Msa1343820 AT2G01760.3 50.909 55 26 1 42 96 135 188 7.06e-12 66.2
Msa1343820 AT1G25550.1 51.724 58 28 0 39 96 206 263 7.28e-12 66.6
Msa1343820 AT5G44190.1 50.877 57 27 1 42 98 147 202 8.15e-12 66.6
Msa1343820 AT5G44190.2 50.877 57 27 1 42 98 147 202 9.82e-12 66.2
Msa1343820 AT2G01760.1 50.909 55 26 1 42 96 200 253 1.22e-11 66.2
Msa1343820 AT2G01760.2 50.909 55 26 1 42 96 228 281 1.81e-11 65.9
Msa1343820 AT3G62670.1 50.000 62 27 1 38 95 207 268 2.51e-11 65.5
Msa1343820 AT4G04555.1 49.057 53 27 0 43 95 15 67 6.22e-11 59.7
Msa1343820 AT5G07210.1 46.377 69 35 2 29 96 216 283 6.26e-11 64.7
Msa1343820 AT5G07210.2 46.377 69 35 2 29 96 208 275 6.32e-11 64.7
Msa1343820 AT1G68670.1 44.286 70 39 0 39 108 212 281 9.66e-11 63.2

Find 79 sgRNAs with CRISPR-Local

Find 174 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCCCTTGTTATGTATTTCT+TGG 0.160531 tig0006613:+14440 None:intergenic
ATTGTCAAATTTGTCATAAA+TGG 0.232689 tig0006613:+13885 None:intergenic
CAAGGAACATGCATGCTTTA+AGG 0.246102 tig0006613:-16549 Msa1343820:CDS
TTCATGAAGAAGAAAACTTT+TGG 0.259021 tig0006613:-14172 Msa1343820:CDS
CATAACAAGGGCATGAATTA+TGG 0.265019 tig0006613:-14430 Msa1343820:CDS
CCTGTAGATGACTCTTTAAA+TGG 0.268102 tig0006613:+16129 None:intergenic
TGTATGGATTTAATTTAAAA+AGG 0.273032 tig0006613:-13773 Msa1343820:three_prime_UTR
AAGAGACTTGACGTCCTTTC+TGG 0.283871 tig0006613:+14212 None:intergenic
ATGCTAAGCCAAGACTAAAA+TGG 0.303611 tig0006613:-16468 Msa1343820:CDS
TTTATAAAGAAAATGCTCTT+AGG 0.311300 tig0006613:+17189 None:intergenic
ATTGTTCTTACTTGTTTGTT+TGG 0.311419 tig0006613:+15621 None:intergenic
AATACTGGCAGCAGTAAAAT+TGG 0.320029 tig0006613:-15856 Msa1343820:intron
ATGAATTATGGAGCTTATAA+TGG 0.338954 tig0006613:-14418 Msa1343820:CDS
TTTCTTGATGGCAGAAATAC+AGG 0.364378 tig0006613:-15906 Msa1343820:intron
ACACTAGGAAGACAAAATTT+AGG 0.366651 tig0006613:-14655 Msa1343820:CDS
GAAACCATTGATTATTCAAT+GGG 0.380276 tig0006613:-14499 Msa1343820:CDS
TATTACAAAGGAAGATTTAG+AGG 0.380797 tig0006613:-14141 Msa1343820:CDS
TCTTTGAGAGTCCTCACTAT+TGG 0.388306 tig0006613:+14465 None:intergenic
TTGAAACTTATGGGAATTCC+TGG 0.388557 tig0006613:-16164 Msa1343820:CDS
GGAAATGGAAGTTCAGATTC+AGG 0.388688 tig0006613:-16508 Msa1343820:CDS
GTTCTGAAAATTTAAAATCA+AGG 0.401492 tig0006613:+14566 None:intergenic
CACATGCAAGGAGGAGGAAA+TGG 0.404031 tig0006613:-16523 Msa1343820:CDS
ATGAATGGACAAACAAATAC+TGG 0.416324 tig0006613:-15871 Msa1343820:CDS
ATCAAATGATAAAGTACTAA+AGG 0.422241 tig0006613:-14350 Msa1343820:CDS
CCTTCACTTCTTCACACAAT+GGG 0.422809 tig0006613:+14395 None:intergenic
ATCTTCAAGAGCACTTCCTT+AGG 0.424937 tig0006613:+17057 None:intergenic
AAGACAAAATTTAGGAGCTA+TGG 0.425889 tig0006613:-14647 Msa1343820:CDS
TGAAACCATTGATTATTCAA+TGG 0.427403 tig0006613:-14500 Msa1343820:CDS
TTGACTTGAATGGTTTCAGC+TGG 0.431912 tig0006613:-13959 Msa1343820:CDS
GTCCTTTCTGGTACTTCATC+CGG 0.441823 tig0006613:+14224 None:intergenic
AATCAATTTCATTTGTCGAC+AGG 0.446239 tig0006613:-17025 Msa1343820:intron
TCAAATGATAAAGTACTAAA+GGG 0.461053 tig0006613:-14349 Msa1343820:intron
ATGAAACGTTCATGAAGATC+TGG 0.465503 tig0006613:+16442 None:intergenic
TCTTCAAGAGCACTTCCTTA+GGG 0.466846 tig0006613:+17058 None:intergenic
AAAGGAAGATTTAGAGGGTG+AGG 0.471041 tig0006613:-14135 Msa1343820:CDS
TAAAAGAAATGAATGTACTT+TGG 0.477579 tig0006613:-14543 Msa1343820:CDS
AATTCTACATTACAATCTGC+TGG 0.478296 tig0006613:+13830 None:intergenic
ACTCCCCATTGAATAATCAA+TGG 0.486204 tig0006613:+14495 None:intergenic
AAGAAGCACCATTGTCATCA+TGG 0.491000 tig0006613:+13997 None:intergenic
GAGAGAGACCTTGTGATGAA+TGG 0.503219 tig0006613:+17211 None:intergenic
AGGATCAGTAGAAGCATGAA+TGG 0.507423 tig0006613:-15886 Msa1343820:CDS
ACACTTACAACTACGAATAG+AGG 0.508720 tig0006613:-14722 Msa1343820:CDS
ATTGAAGCAGTCAATCAACT+TGG 0.511257 tig0006613:-16421 Msa1343820:CDS
TTTAAAATCAAGGCTTTCAG+TGG 0.511406 tig0006613:+14576 None:intergenic
TCACCTTCTTGTGTTTGTTG+AGG 0.515103 tig0006613:+14520 None:intergenic
CTTGTCACTACTTCTGAAGT+TGG 0.516744 tig0006613:+15695 None:intergenic
AAGATTTAGAGGGTGAGGAA+TGG 0.517235 tig0006613:-14130 Msa1343820:CDS
CATATGAAAGATTTAAGCAT+AGG 0.525890 tig0006613:-15647 Msa1343820:CDS
CCATTTAAAGAGTCATCTAC+AGG 0.530254 tig0006613:-16129 Msa1343820:intron
AGACAAAATTTAGGAGCTAT+GGG 0.535664 tig0006613:-14646 Msa1343820:CDS
TCCTTCACTTCTTCACACAA+TGG 0.537283 tig0006613:+14394 None:intergenic
TTCTTATTCCATTCATCACA+AGG 0.539743 tig0006613:-17219 Msa1343820:five_prime_UTR
AAATGGTATAATGTAAGTCC+AGG 0.549657 tig0006613:+16146 None:intergenic
CTACATTACAATCTGCTGGT+TGG 0.550665 tig0006613:+13834 None:intergenic
CAACTACGAATAGAGGCTCA+AGG 0.553992 tig0006613:-14715 Msa1343820:CDS
AGTCTCTTGTCTATGAACAT+AGG 0.562654 tig0006613:-14197 Msa1343820:CDS
CAATTTGAGTTGAAACCCTA+AGG 0.565442 tig0006613:-17073 Msa1343820:five_prime_UTR
TAGTACTTTATCATTTGATG+AGG 0.567615 tig0006613:+14354 None:intergenic
GCTGATGTTGCTGATGATGA+TGG 0.568202 tig0006613:+16578 None:intergenic
GAAGCAGTCAATCAACTTGG+AGG 0.572703 tig0006613:-16418 Msa1343820:CDS
AGCAGAATGTCAGAATCAAG+TGG 0.575801 tig0006613:-15674 Msa1343820:CDS
AGAAGCACCATTGTCATCAT+GGG 0.577045 tig0006613:+13998 None:intergenic
AGGATGCACATGCAAGGAGG+AGG 0.577430 tig0006613:-16529 Msa1343820:CDS
TATGGGACTTGATGCTGCAA+AGG 0.581623 tig0006613:-14629 Msa1343820:CDS
ATTACAAAGGAAGATTTAGA+GGG 0.583154 tig0006613:-14140 Msa1343820:CDS
AGTACTTTATCATTTGATGA+GGG 0.589703 tig0006613:+14355 None:intergenic
AGACCAAGAAATACATAACA+AGG 0.589922 tig0006613:-14443 Msa1343820:CDS
TGGCCTCAACAAACACAAGA+AGG 0.602378 tig0006613:-14523 Msa1343820:CDS
AGCAACATCAGCAACAAGCA+AGG 0.613902 tig0006613:-16567 Msa1343820:CDS
CCCATTGTGTGAAGAAGTGA+AGG 0.616973 tig0006613:-14395 Msa1343820:CDS
GCTTTAAGGATGCACATGCA+AGG 0.621046 tig0006613:-16535 Msa1343820:CDS
AAGATTACATGAGCAGCTTG+AGG 0.632899 tig0006613:-15457 Msa1343820:intron
AACTACGAATAGAGGCTCAA+GGG 0.640142 tig0006613:-14714 Msa1343820:CDS
GAGTTTCTTAACCAATAGTG+AGG 0.644446 tig0006613:-14476 Msa1343820:CDS
GACCGGATGAAGTACCAGAA+AGG 0.645035 tig0006613:-14226 Msa1343820:CDS
GACCAAGAAATACATAACAA+GGG 0.647897 tig0006613:-14442 Msa1343820:CDS
TTGAATTCCCATGATGACAA+TGG 0.705519 tig0006613:-14005 Msa1343820:CDS
AAACCATTGATTATTCAATG+GGG 0.713201 tig0006613:-14498 Msa1343820:CDS
TTAAGGATGCACATGCAAGG+AGG 0.740458 tig0006613:-16532 Msa1343820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTGTACATATATAATTT+AGG + tig0006613:14596-14615 None:intergenic 10.0%
!! GTATAAATACAAATATAAAA+GGG + tig0006613:14883-14902 None:intergenic 10.0%
!! AAATTTAATAATAATTGTGA+CGG + tig0006613:16175-16194 None:intergenic 10.0%
!! GGTATAAATACAAATATAAA+AGG + tig0006613:14884-14903 None:intergenic 15.0%
!!! CTTTTATATTTTGAACAAAA+TGG + tig0006613:15390-15409 None:intergenic 15.0%
!!! TTATGAAGTGATTTAAAATT+TGG + tig0006613:16052-16071 None:intergenic 15.0%
!!! GTCTTTTATTTCTTATAAAT+AGG - tig0006613:16717-16736 Msa1343820:intron 15.0%
!! AAAAATGATTGTTATATGTA+TGG - tig0006613:17176-17195 Msa1343820:five_prime_UTR 15.0%
!!! TGTATGGATTTAATTTAAAA+AGG - tig0006613:17192-17211 Msa1343820:five_prime_UTR 15.0%
!! TTTATAAAGAAAATGCTCTT+AGG + tig0006613:13779-13798 None:intergenic 20.0%
!!! TTTTTTGTCTAGAAGAAAAA+AGG - tig0006613:13844-13863 Msa1343820:three_prime_UTR 20.0%
!!! TTTTTTCATATTGTGGAAAT+CGG - tig0006613:14015-14034 Msa1343820:CDS 20.0%
!! CTTAAAGGTTATATAAATGA+TGG + tig0006613:14671-14690 None:intergenic 20.0%
!!! ATAAGTTTCAAAACTGTTTT+TGG + tig0006613:14792-14811 None:intergenic 20.0%
!!! AAAAACAGTTTTGAAACTTA+TGG - tig0006613:14791-14810 Msa1343820:intron 20.0%
!!! AAAACAGTTTTGAAACTTAT+GGG - tig0006613:14792-14811 Msa1343820:intron 20.0%
!! TGAAAAGTAGTAAAAATAGA+TGG + tig0006613:14985-15004 None:intergenic 20.0%
!!! TTCATATTTTTGAGTTTGTA+TGG - tig0006613:15001-15020 Msa1343820:intron 20.0%
!!! TTATTGATTTACTTTCTTGA+TGG - tig0006613:15047-15066 Msa1343820:intron 20.0%
!! TTCATTTATATCTGAATTTC+TGG + tig0006613:15459-15478 None:intergenic 20.0%
!!! TTTTCAAGATCTAATCTAAA+AGG + tig0006613:15633-15652 None:intergenic 20.0%
!! CAAAAATGATCAATGATTTA+CGG - tig0006613:15756-15775 Msa1343820:intron 20.0%
!! AGAATAAGAGAAATAGAAAA+GGG + tig0006613:15786-15805 None:intergenic 20.0%
!! TAGAATAAGAGAAATAGAAA+AGG + tig0006613:15787-15806 None:intergenic 20.0%
!! TTACAATTACAAATGATTGT+CGG + tig0006613:16008-16027 None:intergenic 20.0%
!!! TTTTGATCCTAATATAATTG+AGG - tig0006613:16147-16166 Msa1343820:CDS 20.0%
!!! GTTCTGAAAATTTAAAATCA+AGG + tig0006613:16402-16421 None:intergenic 20.0%
!! TAAAAGAAATGAATGTACTT+TGG - tig0006613:16422-16441 Msa1343820:CDS 20.0%
!!! ATCAAATGATAAAGTACTAA+AGG - tig0006613:16615-16634 Msa1343820:intron 20.0%
!!! TCAAATGATAAAGTACTAAA+GGG - tig0006613:16616-16635 Msa1343820:intron 20.0%
!!! TTATTTCTTATAAATAGGAC+CGG - tig0006613:16722-16741 Msa1343820:intron 20.0%
!!! AATATTTTGCATCTTGTTTT+TGG - tig0006613:17051-17070 Msa1343820:five_prime_UTR 20.0%
!! ATTGTCAAATTTGTCATAAA+TGG + tig0006613:17083-17102 None:intergenic 20.0%
!!! CATCACATTTTTTCATATTG+TGG - tig0006613:14008-14027 Msa1343820:CDS 25.0%
!! TTTTTCATATTGTGGAAATC+GGG - tig0006613:14016-14035 Msa1343820:CDS 25.0%
!!! TGCGATAAAGTTCTTTTTTT+AGG + tig0006613:14054-14073 None:intergenic 25.0%
! AAATAACTGAACCATAGTAA+AGG + tig0006613:14156-14175 None:intergenic 25.0%
! AATTATTCTTCTCAAGATCA+AGG + tig0006613:14297-14316 None:intergenic 25.0%
!!! ATATAAATGATGGATCACAT+TGG + tig0006613:14661-14680 None:intergenic 25.0%
! ACTTTAAGCATCAATCTTAA+AGG + tig0006613:14686-14705 None:intergenic 25.0%
! CTTAAAGTGTAAAACATCTT+TGG - tig0006613:14698-14717 Msa1343820:CDS 25.0%
! TATTCTTCTTATGAAAGACA+TGG + tig0006613:15179-15198 None:intergenic 25.0%
! CATATGAAAGATTTAAGCAT+AGG - tig0006613:15318-15337 Msa1343820:intron 25.0%
! ATTGTTCTTACTTGTTTGTT+TGG + tig0006613:15347-15366 None:intergenic 25.0%
! AAAGAATATTCTCTAATGTG+AGG - tig0006613:15406-15425 Msa1343820:intron 25.0%
! GATTTGAATAATCCTCAATT+TGG - tig0006613:15596-15615 Msa1343820:intron 25.0%
! GTTAAAAAATCACTGTACTA+TGG + tig0006613:15840-15859 None:intergenic 25.0%
!!! AAACTTCACTACATTTTGAT+GGG + tig0006613:16084-16103 None:intergenic 25.0%
!! TGAAACCATTGATTATTCAA+TGG - tig0006613:16465-16484 Msa1343820:CDS 25.0%
!! GAAACCATTGATTATTCAAT+GGG - tig0006613:16466-16485 Msa1343820:CDS 25.0%
!! AAACCATTGATTATTCAATG+GGG - tig0006613:16467-16486 Msa1343820:CDS 25.0%
! ATGAATTATGGAGCTTATAA+TGG - tig0006613:16547-16566 Msa1343820:CDS 25.0%
! AGTACTTTATCATTTGATGA+GGG + tig0006613:16613-16632 None:intergenic 25.0%
! TAGTACTTTATCATTTGATG+AGG + tig0006613:16614-16633 None:intergenic 25.0%
!! GAAATTTGTCGATTATCAAT+AGG + tig0006613:16663-16682 None:intergenic 25.0%
!! TTCATGAAGAAGAAAACTTT+TGG - tig0006613:16793-16812 Msa1343820:intron 25.0%
!! TCATGAAGAAGAAAACTTTT+GGG - tig0006613:16794-16813 Msa1343820:intron 25.0%
! TATTACAAAGGAAGATTTAG+AGG - tig0006613:16824-16843 Msa1343820:intron 25.0%
! ATTACAAAGGAAGATTTAGA+GGG - tig0006613:16825-16844 Msa1343820:intron 25.0%
!! AACCATTCAAGTCAAATTTT+TGG + tig0006613:17001-17020 None:intergenic 25.0%
!! TTTCTTTTCAAAATGCTCAA+AGG - tig0006613:17228-17247 Msa1343820:five_prime_UTR 25.0%
TTCTTATTCCATTCATCACA+AGG - tig0006613:13746-13765 Msa1343820:three_prime_UTR 30.0%
AATCAATTTCATTTGTCGAC+AGG - tig0006613:13940-13959 Msa1343820:exon 30.0%
!!! CTATGGTTCAGTTATTTTGA+CGG - tig0006613:14159-14178 Msa1343820:CDS 30.0%
AGTACATTCTCTTCAATAGA+AGG + tig0006613:14366-14385 None:intergenic 30.0%
!! AATTAATTTTGACGCACTGT+CGG - tig0006613:14612-14631 Msa1343820:CDS 30.0%
AAATGGTATAATGTAAGTCC+AGG + tig0006613:14822-14841 None:intergenic 30.0%
GAGTTTGTATGGTTATTTGA+AGG - tig0006613:15012-15031 Msa1343820:intron 30.0%
ATGAATGGACAAACAAATAC+TGG - tig0006613:15094-15113 Msa1343820:intron 30.0%
TAATCTAAAAGGTCCTATAG+GGG + tig0006613:15622-15641 None:intergenic 30.0%
CTAATCTAAAAGGTCCTATA+GGG + tig0006613:15623-15642 None:intergenic 30.0%
TCTAATCTAAAAGGTCCTAT+AGG + tig0006613:15624-15643 None:intergenic 30.0%
TCGTTGAAATTGTAAACCAT+CGG - tig0006613:15672-15691 Msa1343820:CDS 30.0%
ATTTGAACTAAAATGACCGA+TGG + tig0006613:15691-15710 None:intergenic 30.0%
GAAGATGATCCAAATCTATT+AGG + tig0006613:15818-15837 None:intergenic 30.0%
! CAAACTTCACTACATTTTGA+TGG + tig0006613:16085-16104 None:intergenic 30.0%
ACACTAGGAAGACAAAATTT+AGG - tig0006613:16310-16329 Msa1343820:intron 30.0%
AAGACAAAATTTAGGAGCTA+TGG - tig0006613:16318-16337 Msa1343820:intron 30.0%
AGACAAAATTTAGGAGCTAT+GGG - tig0006613:16319-16338 Msa1343820:intron 30.0%
! TTTAAAATCAAGGCTTTCAG+TGG + tig0006613:16392-16411 None:intergenic 30.0%
AGACCAAGAAATACATAACA+AGG - tig0006613:16522-16541 Msa1343820:CDS 30.0%
GACCAAGAAATACATAACAA+GGG - tig0006613:16523-16542 Msa1343820:CDS 30.0%
! CATGAAGAAGAAAACTTTTG+GGG - tig0006613:16795-16814 Msa1343820:intron 30.0%
! ATGAAGAAGAAAACTTTTGG+GGG - tig0006613:16796-16815 Msa1343820:intron 30.0%
!! AGCCAAAAATTTGACTTGAA+TGG - tig0006613:16996-17015 Msa1343820:intron 30.0%
!!! GAATTGCTAAGATTTTTAGC+TGG - tig0006613:17028-17047 Msa1343820:five_prime_UTR 30.0%
AATTCTACATTACAATCTGC+TGG + tig0006613:17138-17157 None:intergenic 30.0%
!! CAATTTGAGTTGAAACCCTA+AGG - tig0006613:13892-13911 Msa1343820:three_prime_UTR 35.0%
TGTTAGTTCGATGTCAAGTT+TGG - tig0006613:14245-14264 Msa1343820:intron 35.0%
ATGCTAAGCCAAGACTAAAA+TGG - tig0006613:14497-14516 Msa1343820:CDS 35.0%
ATGAAACGTTCATGAAGATC+TGG + tig0006613:14526-14545 None:intergenic 35.0%
ATTGAAGCAGTCAATCAACT+TGG - tig0006613:14544-14563 Msa1343820:CDS 35.0%
TTGAAACTTATGGGAATTCC+TGG - tig0006613:14801-14820 Msa1343820:intron 35.0%
CCTGTAGATGACTCTTTAAA+TGG + tig0006613:14839-14858 None:intergenic 35.0%
CCATTTAAAGAGTCATCTAC+AGG - tig0006613:14836-14855 Msa1343820:intron 35.0%
! TTTCTTGATGGCAGAAATAC+AGG - tig0006613:15059-15078 Msa1343820:intron 35.0%
AATACTGGCAGCAGTAAAAT+TGG - tig0006613:15109-15128 Msa1343820:intron 35.0%
ATGCGCTAACCTAATAGATT+TGG - tig0006613:15806-15825 Msa1343820:intron 35.0%
AGACAACATATTACTGCATG+TGG - tig0006613:15862-15881 Msa1343820:CDS 35.0%
AGAAGTAGTCAGACATTGTT+AGG + tig0006613:15952-15971 None:intergenic 35.0%
AACAATGTCTGACTACTTCT+AGG - tig0006613:15952-15971 Msa1343820:intron 35.0%
ACACTTACAACTACGAATAG+AGG - tig0006613:16243-16262 Msa1343820:intron 35.0%
GAAAAAGCTAAGGAAACACT+AGG - tig0006613:16295-16314 Msa1343820:intron 35.0%
ACTCCCCATTGAATAATCAA+TGG + tig0006613:16473-16492 None:intergenic 35.0%
GAGTTTCTTAACCAATAGTG+AGG - tig0006613:16489-16508 Msa1343820:CDS 35.0%
! TGCCCTTGTTATGTATTTCT+TGG + tig0006613:16528-16547 None:intergenic 35.0%
! CATAACAAGGGCATGAATTA+TGG - tig0006613:16535-16554 Msa1343820:CDS 35.0%
CGATTATCAATAGGACATGA+GGG + tig0006613:16654-16673 None:intergenic 35.0%
TCGATTATCAATAGGACATG+AGG + tig0006613:16655-16674 None:intergenic 35.0%
AGTCTCTTGTCTATGAACAT+AGG - tig0006613:16768-16787 Msa1343820:intron 35.0%
TTGGGGGAGAAATATTACAA+AGG - tig0006613:16812-16831 Msa1343820:intron 35.0%
!! AGAAAAAGTGCTGAATCTAG+TGG - tig0006613:16864-16883 Msa1343820:intron 35.0%
TTGAATTCCCATGATGACAA+TGG - tig0006613:16960-16979 Msa1343820:intron 35.0%
!! TCTTCAAGAGCACTTCCTTA+GGG + tig0006613:13910-13929 None:intergenic 40.0%
!! ATCTTCAAGAGCACTTCCTT+AGG + tig0006613:13911-13930 None:intergenic 40.0%
!!! GTGTTTTAACCCGAACATGA+TGG - tig0006613:14105-14124 Msa1343820:CDS 40.0%
ACCGATTGAACCATCATGTT+CGG + tig0006613:14118-14137 None:intergenic 40.0%
CAATCGGTTGAATCTTGAAC+TGG - tig0006613:14130-14149 Msa1343820:CDS 40.0%
!! TCTTGAACTGGCCTTTACTA+TGG - tig0006613:14142-14161 Msa1343820:CDS 40.0%
GTTCAATAGCGATTTCATCC+CGG - tig0006613:14181-14200 Msa1343820:CDS 40.0%
GCAGTTGAACTATGATCCAA+AGG - tig0006613:14219-14238 Msa1343820:CDS 40.0%
CATCGAACTAACAAGACCTT+TGG + tig0006613:14238-14257 None:intergenic 40.0%
CAAGGAACATGCATGCTTTA+AGG - tig0006613:14416-14435 Msa1343820:CDS 40.0%
GGAAATGGAAGTTCAGATTC+AGG - tig0006613:14457-14476 Msa1343820:CDS 40.0%
!! TCTGGTGTCCATTTTAGTCT+TGG + tig0006613:14508-14527 None:intergenic 40.0%
! AGGATCAGTAGAAGCATGAA+TGG - tig0006613:15079-15098 Msa1343820:intron 40.0%
TGGCAGCAGTAAAATTGGTA+AGG - tig0006613:15114-15133 Msa1343820:intron 40.0%
GGCAGCAGTAAAATTGGTAA+GGG - tig0006613:15115-15134 Msa1343820:intron 40.0%
!! CTTGTCACTACTTCTGAAGT+TGG + tig0006613:15273-15292 None:intergenic 40.0%
AGCAGAATGTCAGAATCAAG+TGG - tig0006613:15291-15310 Msa1343820:intron 40.0%
AAGATTACATGAGCAGCTTG+AGG - tig0006613:15508-15527 Msa1343820:CDS 40.0%
TGCTTGACATTGACAACACA+TGG - tig0006613:15732-15751 Msa1343820:intron 40.0%
ACCTAAATGCGTCTTTAAGC+AGG - tig0006613:16213-16232 Msa1343820:intron 40.0%
ACCTGCTTAAAGACGCATTT+AGG + tig0006613:16217-16236 None:intergenic 40.0%
AACTACGAATAGAGGCTCAA+GGG - tig0006613:16251-16270 Msa1343820:intron 40.0%
!!! CTTTTTCAAGCACTGAGTGA+AGG + tig0006613:16282-16301 None:intergenic 40.0%
CTCAGTGCTTGAAAAAGCTA+AGG - tig0006613:16285-16304 Msa1343820:intron 40.0%
! TCACCTTCTTGTGTTTGTTG+AGG + tig0006613:16448-16467 None:intergenic 40.0%
! TCTTTGAGAGTCCTCACTAT+TGG + tig0006613:16503-16522 None:intergenic 40.0%
CCTTCACTTCTTCACACAAT+GGG + tig0006613:16573-16592 None:intergenic 40.0%
TCCTTCACTTCTTCACACAA+TGG + tig0006613:16574-16593 None:intergenic 40.0%
AAAGGAAGATTTAGAGGGTG+AGG - tig0006613:16830-16849 Msa1343820:intron 40.0%
AAGATTTAGAGGGTGAGGAA+TGG - tig0006613:16835-16854 Msa1343820:intron 40.0%
!! AGAAGCACCATTGTCATCAT+GGG + tig0006613:16970-16989 None:intergenic 40.0%
!! AAGAAGCACCATTGTCATCA+TGG + tig0006613:16971-16990 None:intergenic 40.0%
! TTGACTTGAATGGTTTCAGC+TGG - tig0006613:17006-17025 Msa1343820:intron 40.0%
CTACATTACAATCTGCTGGT+TGG + tig0006613:17134-17153 None:intergenic 40.0%
GAGAGAGACCTTGTGATGAA+TGG + tig0006613:13757-13776 None:intergenic 45.0%
CCGATTGAACCATCATGTTC+GGG + tig0006613:14117-14136 None:intergenic 45.0%
CCCGAACATGATGGTTCAAT+CGG - tig0006613:14114-14133 Msa1343820:CDS 45.0%
! CGATTTCATCCCGGTTCTAA+CGG - tig0006613:14190-14209 Msa1343820:CDS 45.0%
! ATCCCGGTTCTAACGGTTTA+AGG - tig0006613:14197-14216 Msa1343820:CDS 45.0%
TGCCTTAAACCGTTAGAACC+GGG + tig0006613:14202-14221 None:intergenic 45.0%
CTGCCTTAAACCGTTAGAAC+CGG + tig0006613:14203-14222 None:intergenic 45.0%
! GCTGATGTTGCTGATGATGA+TGG + tig0006613:14390-14409 None:intergenic 45.0%
AGCAACATCAGCAACAAGCA+AGG - tig0006613:14398-14417 Msa1343820:CDS 45.0%
!! GCTTTAAGGATGCACATGCA+AGG - tig0006613:14430-14449 Msa1343820:CDS 45.0%
TTAAGGATGCACATGCAAGG+AGG - tig0006613:14433-14452 Msa1343820:CDS 45.0%
GAAGCAGTCAATCAACTTGG+AGG - tig0006613:14547-14566 Msa1343820:CDS 45.0%
TGAGCAGCTTGAGGTATAGA+AGG - tig0006613:15517-15536 Msa1343820:intron 45.0%
ATCCTCAATTTGGCCCCTAT+AGG - tig0006613:15606-15625 Msa1343820:intron 45.0%
GACGGCGCCTCAATTATATT+AGG + tig0006613:16157-16176 None:intergenic 45.0%
CAACTACGAATAGAGGCTCA+AGG - tig0006613:16250-16269 Msa1343820:intron 45.0%
TATGGGACTTGATGCTGCAA+AGG - tig0006613:16336-16355 Msa1343820:intron 45.0%
TGGCCTCAACAAACACAAGA+AGG - tig0006613:16442-16461 Msa1343820:CDS 45.0%
CCCATTGTGTGAAGAAGTGA+AGG - tig0006613:16570-16589 Msa1343820:CDS 45.0%
! GTCCTTTCTGGTACTTCATC+CGG + tig0006613:16744-16763 None:intergenic 45.0%
AAGAGACTTGACGTCCTTTC+TGG + tig0006613:16756-16775 None:intergenic 45.0%
!! AAAACTAAAAATTATTTATA+TGG + tig0006613:14905-14924 None:intergenic 5.0%
!!! ATATAAATAATTTTTAGTTT+TGG - tig0006613:14904-14923 Msa1343820:intron 5.0%
CACATGCAAGGAGGAGGAAA+TGG - tig0006613:14442-14461 Msa1343820:CDS 50.0%
GTCCTATAGGGGCCAAATTG+AGG + tig0006613:15611-15630 None:intergenic 50.0%
! GACCGGATGAAGTACCAGAA+AGG - tig0006613:16739-16758 Msa1343820:intron 50.0%
AGGATGCACATGCAAGGAGG+AGG - tig0006613:14436-14455 Msa1343820:CDS 55.0%
Chromosome Type Strat End Strand Name
tig0006613 gene 13734 17253 13734 ID=Msa1343820;Name=Msa1343820
tig0006613 mRNA 13734 17253 13734 ID=Msa1343820-mRNA-1;Parent=Msa1343820;Name=Msa1343820-mRNA-1;_AED=0.19;_eAED=0.19;_QI=231|1|1|1|0.85|0.75|8|216|397
tig0006613 exon 13734 14248 13734 ID=Msa1343820-mRNA-1:exon:4291;Parent=Msa1343820-mRNA-1
tig0006613 exon 14350 14752 14350 ID=Msa1343820-mRNA-1:exon:4290;Parent=Msa1343820-mRNA-1
tig0006613 exon 15458 15527 15458 ID=Msa1343820-mRNA-1:exon:4289;Parent=Msa1343820-mRNA-1
tig0006613 exon 15632 15719 15632 ID=Msa1343820-mRNA-1:exon:4288;Parent=Msa1343820-mRNA-1
tig0006613 exon 15857 15914 15857 ID=Msa1343820-mRNA-1:exon:4287;Parent=Msa1343820-mRNA-1
tig0006613 exon 16130 16206 16130 ID=Msa1343820-mRNA-1:exon:4286;Parent=Msa1343820-mRNA-1
tig0006613 exon 16410 16611 16410 ID=Msa1343820-mRNA-1:exon:4285;Parent=Msa1343820-mRNA-1
tig0006613 exon 17026 17253 17026 ID=Msa1343820-mRNA-1:exon:4284;Parent=Msa1343820-mRNA-1
tig0006613 five_prime_UTR 17026 17253 17026 ID=Msa1343820-mRNA-1:five_prime_utr;Parent=Msa1343820-mRNA-1
tig0006613 five_prime_UTR 16609 16611 16609 ID=Msa1343820-mRNA-1:five_prime_utr;Parent=Msa1343820-mRNA-1
tig0006613 CDS 16410 16608 16410 ID=Msa1343820-mRNA-1:cds;Parent=Msa1343820-mRNA-1
tig0006613 CDS 16130 16206 16130 ID=Msa1343820-mRNA-1:cds;Parent=Msa1343820-mRNA-1
tig0006613 CDS 15857 15914 15857 ID=Msa1343820-mRNA-1:cds;Parent=Msa1343820-mRNA-1
tig0006613 CDS 15632 15719 15632 ID=Msa1343820-mRNA-1:cds;Parent=Msa1343820-mRNA-1
tig0006613 CDS 15458 15527 15458 ID=Msa1343820-mRNA-1:cds;Parent=Msa1343820-mRNA-1
tig0006613 CDS 14350 14752 14350 ID=Msa1343820-mRNA-1:cds;Parent=Msa1343820-mRNA-1
tig0006613 CDS 13950 14248 13950 ID=Msa1343820-mRNA-1:cds;Parent=Msa1343820-mRNA-1
tig0006613 three_prime_UTR 13734 13949 13734 ID=Msa1343820-mRNA-1:three_prime_utr;Parent=Msa1343820-mRNA-1
Gene Sequence

>Msa1343820

ATGTACTACCATCATCATCAGCAACATCAGCAACAAGCAAGGAACATGCATGCTTTAAGGATGCACATGCAAGGAGGAGGAAATGGAAGTTCAGATTCAGGACTTGTTCTTTCAACTGATGCTAAGCCAAGACTAAAATGGACACCAGATCTTCATGAACGTTTCATTGAAGCAGTCAATCAACTTGGAGGAGCAGATAAAGCTACACCAAAAACAGTTTTGAAACTTATGGGAATTCCTGGACTTACATTATACCATTTAAAGAGTCATCTACAGAAATACAGGATCAGTAGAAGCATGAATGGACAAACAAATACTGGCAGCAGTAAAATTGCACCAACTTCAGAAGTAGTGACAAGCAGAATGTCAGAATCAAGTGGAATTCATATGAAAGATTTAAGCATAGGACTCCAAACAAACAAAAATTCAGATATAAATGAAGCATTAAATATGCAAATTGAAGTGCAAAGAAGATTACATGAGCAGCTTGAGGTACAACGACACTTACAACTACGAATAGAGGCTCAAGGGAAGTACCTTCACTCAGTGCTTGAAAAAGCTAAGGAAACACTAGGAAGACAAAATTTAGGAGCTATGGGACTTGATGCTGCAAAGGTTCAACTATCTGAATTAGCATCAAGAGTATCCACTGAAAGCCTTGATTTTAAATTTTCAGAACTAAAAGAAATGAATGTACTTTGGCCTCAACAAACACAAGAAGGTGAAACCATTGATTATTCAATGGGGAGTTTCTTAACCAATAGTGAGGACTCTCAAAGAGACCAAGAAATACATAACAAGGGCATGAATTATGGAGCTTATAATGGCCCATTGTGTGAAGAAGTGAAGGAGAATATGATGTTTCTTCCCTCATCAAATGATAAAGTACTAAAGGGACCGGATGAAGTACCAGAAAGGACGTCAAGTCTCTTGTCTATGAACATAGGAGTTCATGAAGAAGAAAACTTTTGGGGGAGAAATATTACAAAGGAAGATTTAGAGGGTGAGGAATGGAAAAGAAGAAAAAGTGCTGAATCTAGTGGAGTTCAACTTAAACTTAATAGTGACAAAATTTCTCAAGATTATAGACTAGCAAACTTTGATATGAAACTAGACTTGAATTCCCATGATGACAATGGTGCTTCTTCTCACAGCCAAAAATTTGACTTGAATGGTTTCAGCTGGAATTGCTAA
Protein sequence

>Msa1343820

MYYHHHQQHQQQARNMHALRMHMQGGGNGSSDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVLKLMGIPGLTLYHLKSHLQKYRISRSMNGQTNTGSSKIAPTSEVVTSRMSESSGIHMKDLSIGLQTNKNSDINEALNMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLHSVLEKAKETLGRQNLGAMGLDAAKVQLSELASRVSTESLDFKFSELKEMNVLWPQQTQEGETIDYSMGSFLTNSEDSQRDQEIHNKGMNYGAYNGPLCEEVKENMMFLPSSNDKVLKGPDEVPERTSSLLSMNIGVHEEENFWGRNITKEDLEGEEWKRRKSAESSGVQLKLNSDKISQDYRLANFDMKLDLNSHDDNGASSHSQKFDLNGFSWNC*