Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0894720 | XP_003619790.2 | 81.226 | 261 | 9 | 2 | 1 | 261 | 1 | 221 | 4.76e-121 | 354 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0894720 | G7KPP1 | 81.226 | 261 | 9 | 2 | 1 | 261 | 1 | 221 | 2.28e-121 | 354 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0036920 | Msa0894720 | 0.812081 | 5.072054e-51 | -8.615850e-47 |
Msa0607540 | Msa0894720 | 0.809190 | 2.138322e-50 | -8.615850e-47 |
Msa0657610 | Msa0894720 | 0.803094 | 4.107711e-49 | -8.615850e-47 |
Msa0690440 | Msa0894720 | 0.801141 | 1.035758e-48 | -8.615850e-47 |
Msa0698930 | Msa0894720 | 0.811397 | 7.146770e-51 | -8.615850e-47 |
Msa0807030 | Msa0894720 | 0.804615 | 1.984470e-49 | -8.615850e-47 |
Msa0813400 | Msa0894720 | 0.801255 | 9.815015e-49 | -8.615850e-47 |
Msa0820850 | Msa0894720 | 0.800581 | 1.347552e-48 | -8.615850e-47 |
Msa0178860 | Msa0894720 | -0.802183 | 6.330600e-49 | -8.615850e-47 |
Msa0376590 | Msa0894720 | 0.808225 | 3.438363e-50 | -8.615850e-47 |
Msa0381600 | Msa0894720 | -0.806341 | 8.624013e-50 | -8.615850e-47 |
Msa0381620 | Msa0894720 | -0.813273 | 2.782841e-51 | -8.615850e-47 |
Msa0392040 | Msa0894720 | -0.800864 | 1.179612e-48 | -8.615850e-47 |
Msa0433410 | Msa0894720 | -0.806448 | 8.187289e-50 | -8.615850e-47 |
Msa0469940 | Msa0894720 | -0.814253 | 1.693111e-51 | -8.615850e-47 |
Msa0477130 | Msa0894720 | -0.816208 | 6.223941e-52 | -8.615850e-47 |
Msa0249560 | Msa0894720 | 0.810932 | 9.013740e-51 | -8.615850e-47 |
Msa0285450 | Msa0894720 | 0.802101 | 6.580891e-49 | -8.615850e-47 |
Msa0306210 | Msa0894720 | -0.801537 | 8.592820e-49 | -8.615850e-47 |
Msa0344690 | Msa0894720 | -0.803448 | 3.469978e-49 | -8.615850e-47 |
Msa0484780 | Msa0894720 | 0.815004 | 1.154045e-51 | -8.615850e-47 |
Msa0553460 | Msa0894720 | 0.805949 | 1.042919e-49 | -8.615850e-47 |
Msa0555020 | Msa0894720 | 0.806545 | 7.809608e-50 | -8.615850e-47 |
Msa0864470 | Msa0894720 | -0.808624 | 2.826967e-50 | -8.615850e-47 |
Msa0894720 | Msa0937150 | 0.812890 | 3.376502e-51 | -8.615850e-47 |
Msa0894720 | Msa0982270 | 0.803293 | 3.735933e-49 | -8.615850e-47 |
Msa0894720 | Msa1015800 | 0.818195 | 2.225274e-52 | -8.615850e-47 |
Msa0894720 | Msa1059570 | 0.812604 | 3.899052e-51 | -8.615850e-47 |
Msa0894720 | Msa1071110 | 0.804864 | 1.760529e-49 | -8.615850e-47 |
Msa0894720 | Msa1082500 | 0.807034 | 6.154828e-50 | -8.615850e-47 |
Msa0894720 | Msa1100480 | 0.807445 | 5.037460e-50 | -8.615850e-47 |
Msa0894720 | Msa1104630 | 0.801061 | 1.075224e-48 | -8.615850e-47 |
Msa0894720 | Msa1124540 | -0.823479 | 1.354618e-53 | -8.615850e-47 |
Msa0894720 | Msa1144720 | -0.805235 | 1.472364e-49 | -8.615850e-47 |
Msa0894720 | Msa1178110 | 0.805194 | 1.501492e-49 | -8.615850e-47 |
Msa0894720 | Msa1224580 | -0.802047 | 6.751815e-49 | -8.615850e-47 |
Msa0894720 | Msa1329700 | 0.803088 | 4.118081e-49 | -8.615850e-47 |
Msa0894720 | Msa1364830 | 0.814328 | 1.629256e-51 | -8.615850e-47 |
Msa0894720 | Msa1451620 | -0.834220 | 3.399523e-56 | -8.615850e-47 |
Msa0894720 | Msa1453560 | 0.819115 | 1.375575e-52 | -8.615850e-47 |
Msa0894720 | Msa1462070 | 0.829539 | 4.865570e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0894720 | MtrunA17_Chr6g0478121 | 91.667 | 132 | 10 | 1 | 130 | 261 | 10 | 140 | 1.31e-81 | 241 |
Msa0894720 | MtrunA17_Chr6g0478141 | 97.333 | 75 | 2 | 0 | 41 | 115 | 1 | 75 | 5.02e-49 | 156 |
Msa0894720 | MtrunA17_Chr6g0478151 | 97.561 | 41 | 1 | 0 | 1 | 41 | 1 | 41 | 3.58e-12 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0894720 | AT1G73350.2 | 56.981 | 265 | 55 | 7 | 1 | 261 | 1 | 210 | 2.43e-82 | 246 |
Msa0894720 | AT1G73350.1 | 56.226 | 265 | 55 | 8 | 1 | 261 | 1 | 208 | 4.94e-79 | 238 |
Msa0894720 | AT1G73350.7 | 51.556 | 225 | 52 | 6 | 41 | 261 | 1 | 172 | 1.66e-56 | 179 |
Msa0894720 | AT1G73350.3 | 51.556 | 225 | 52 | 6 | 41 | 261 | 1 | 172 | 1.66e-56 | 179 |
Msa0894720 | AT1G73350.6 | 48.889 | 225 | 56 | 7 | 41 | 261 | 1 | 170 | 4.71e-44 | 147 |
Msa0894720 | AT1G73350.4 | 44.976 | 209 | 58 | 6 | 57 | 261 | 33 | 188 | 1.17e-33 | 120 |
Msa0894720 | AT1G73350.5 | 44.976 | 209 | 58 | 6 | 57 | 261 | 58 | 213 | 3.45e-33 | 120 |
Find 73 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTAAATGTATGAAACATTT+AGG | 0.234169 | 6_1:-81132276 | Msa0894720:three_prime_UTR |
GATCGCTCCTCAACTTTCTT+TGG | 0.244252 | 6_1:+81132552 | None:intergenic |
CTGATCCCACTCTTTGGCTT+TGG | 0.285761 | 6_1:+81132814 | None:intergenic |
GCAGAAATCGTAGTTGATTA+TGG | 0.293712 | 6_1:-81137643 | Msa0894720:exon |
AGAAAGGAAATGAACATAAA+AGG | 0.308980 | 6_1:+81133911 | None:intergenic |
ATCAACCTGATCCCACTCTT+TGG | 0.342722 | 6_1:+81132808 | None:intergenic |
ACCTTTGGGGTCGGTAAGAT+TGG | 0.364856 | 6_1:+81137596 | None:intergenic |
AGAATGTTTGACTTGTTTAG+AGG | 0.393853 | 6_1:-81132336 | Msa0894720:three_prime_UTR |
AAAAGAAGAAAATCAAGAAT+TGG | 0.404001 | 6_1:-81132242 | Msa0894720:three_prime_UTR |
GAGCGTGGAGGTTATCTTCA+TGG | 0.409638 | 6_1:-81134181 | Msa0894720:CDS |
GGCTTTGGCTCAACACGTAA+TGG | 0.411633 | 6_1:+81132829 | None:intergenic |
GACAACGAGCAGTGTTTGTC+AGG | 0.417843 | 6_1:-81132576 | Msa0894720:CDS |
GTAGAGGAACACCCAGTGTC+AGG | 0.417871 | 6_1:-81132510 | Msa0894720:CDS |
CCTTCAAACCTCGGTCGCTT+AGG | 0.424206 | 6_1:+81132669 | None:intergenic |
AAGAAGATAGATAGAGAGAA+TGG | 0.425678 | 6_1:+81137690 | None:intergenic |
ATGATGCGCTTGATGGTAGA+TGG | 0.432255 | 6_1:-81132393 | Msa0894720:three_prime_UTR |
ACTATATCTCAAGGAGCAAA+TGG | 0.436920 | 6_1:-81134003 | Msa0894720:CDS |
TGTTTCTTTCACATACATCT+TGG | 0.437831 | 6_1:-81133872 | Msa0894720:CDS |
GGCTTATTGCCTTCAAACCT+CGG | 0.442397 | 6_1:+81132660 | None:intergenic |
AAGCAGATGCAAGAAGTTGC+TGG | 0.449188 | 6_1:-81134205 | Msa0894720:intron |
GTTGAGGAGCGATCTTTGAC+TGG | 0.458517 | 6_1:-81132543 | Msa0894720:CDS |
ATGATTGATGATGCGCTTGA+TGG | 0.465595 | 6_1:-81132400 | Msa0894720:exon |
ACAGATAAGAAATTGGGTAA+AGG | 0.470056 | 6_1:-81137465 | Msa0894720:intron |
GTATGAAACATTTAGGAAGA+AGG | 0.470399 | 6_1:-81132269 | Msa0894720:three_prime_UTR |
CCTTCATGCAACCCTGACAC+TGG | 0.490642 | 6_1:+81132498 | None:intergenic |
AGCAGATGCAAGAAGTTGCT+GGG | 0.498435 | 6_1:-81134204 | Msa0894720:intron |
CCGGCAGAGTTATCAACCTT+AGG | 0.500496 | 6_1:+81132465 | None:intergenic |
CCTAAGGTTGATAACTCTGC+CGG | 0.502092 | 6_1:-81132465 | Msa0894720:CDS |
CTAAGGTTGATAACTCTGCC+GGG | 0.511044 | 6_1:-81132464 | Msa0894720:CDS |
TGAGATGATAGACACTGAAA+GGG | 0.523633 | 6_1:+81137751 | None:intergenic |
ATGAGATGATAGACACTGAA+AGG | 0.523915 | 6_1:+81137750 | None:intergenic |
AAATCGTAGTTGATTATGGC+AGG | 0.524807 | 6_1:-81137639 | Msa0894720:exon |
GTATTAAATTGTAGTGAAGA+TGG | 0.526492 | 6_1:-81132311 | Msa0894720:three_prime_UTR |
CAAAGCCAAAGAGTGGGATC+AGG | 0.528930 | 6_1:-81132813 | Msa0894720:intron |
GGCTCAACACGTAATGGTAA+AGG | 0.534011 | 6_1:+81132835 | None:intergenic |
ATTATATATACCTTTGGGGT+CGG | 0.541483 | 6_1:+81137587 | None:intergenic |
AATGGTAAAGGTACTGATGC+AGG | 0.543680 | 6_1:+81132847 | None:intergenic |
CAAGAAGTTGCTGGGGAGCG+TGG | 0.548648 | 6_1:-81134196 | Msa0894720:CDS |
TTTCCAACGCATGGTTGCAA+AGG | 0.549380 | 6_1:-81137412 | Msa0894720:intron |
CTTCATGCAACCCTGACACT+GGG | 0.549577 | 6_1:+81132499 | None:intergenic |
AGCGTGGAGGTTATCTTCAT+GGG | 0.551295 | 6_1:-81134180 | Msa0894720:CDS |
GGAGGTTATCTTCATGGGCG+AGG | 0.565839 | 6_1:-81134175 | Msa0894720:CDS |
CATCTGAGCTAGCATATGCC+AGG | 0.571449 | 6_1:+81132430 | None:intergenic |
GCATCACTAGGAGCTTGCAT+TGG | 0.574315 | 6_1:+81132639 | None:intergenic |
TAGTAGATCGTCACTGTCCA+AGG | 0.576121 | 6_1:+81134022 | None:intergenic |
CGGGACTGTTATCTACAGAA+AGG | 0.577203 | 6_1:+81133895 | None:intergenic |
TAACCTTTGCAACCATGCGT+TGG | 0.581821 | 6_1:+81137409 | None:intergenic |
TGAAGGTGAAACTAAGCCTA+AGG | 0.583433 | 6_1:-81132481 | Msa0894720:CDS |
CAGCAGCGAACACAGACTCC+AGG | 0.587051 | 6_1:+81133828 | None:intergenic |
AGACGTTACTTTCCAACGCA+TGG | 0.588343 | 6_1:-81137421 | Msa0894720:CDS |
CAAGGAGCAAATGGAAGCTG+AGG | 0.592081 | 6_1:-81133994 | Msa0894720:CDS |
CCAGTGTCAGGGTTGCATGA+AGG | 0.592986 | 6_1:-81132498 | Msa0894720:CDS |
TGCCAGGCCTAGTAATCCCC+CGG | 0.596355 | 6_1:+81132446 | None:intergenic |
GAAAGGGGTAAAACGAGAAG+AGG | 0.601894 | 6_1:+81137767 | None:intergenic |
GTCAGGACCAAAGAAAGTTG+AGG | 0.609624 | 6_1:-81132559 | Msa0894720:CDS |
TAGAGGAACACCCAGTGTCA+GGG | 0.615935 | 6_1:-81132509 | Msa0894720:CDS |
GTTGAGCCAAAGCCAAAGAG+TGG | 0.615970 | 6_1:-81132820 | Msa0894720:CDS |
GAGAATTATATATACCTTTG+GGG | 0.622345 | 6_1:+81137583 | None:intergenic |
TAAGGTTGATAACTCTGCCG+GGG | 0.624952 | 6_1:-81132463 | Msa0894720:CDS |
AGATTAAACCTAAGCGACCG+AGG | 0.626170 | 6_1:-81132677 | Msa0894720:CDS |
GACTGGATCGAAGAAAGTAG+AGG | 0.629708 | 6_1:-81132526 | Msa0894720:CDS |
TGACGATCTACTATATCTCA+AGG | 0.641457 | 6_1:-81134012 | Msa0894720:CDS |
TTGAGCCAAAGCCAAAGAGT+GGG | 0.647588 | 6_1:-81132819 | Msa0894720:CDS |
GGTTATCTTCATGGGCGAGG+CGG | 0.653241 | 6_1:-81134172 | Msa0894720:intron |
GCAGATGCAAGAAGTTGCTG+GGG | 0.658673 | 6_1:-81134203 | Msa0894720:intron |
ACCAATCTTACCGACCCCAA+AGG | 0.660181 | 6_1:-81137597 | Msa0894720:intron |
GAAGTTGCTGGGGAGCGTGG+AGG | 0.665466 | 6_1:-81134193 | Msa0894720:CDS |
GATGTATGTGAAAGAAACAC+GGG | 0.679520 | 6_1:+81133876 | None:intergenic |
AGATGTATGTGAAAGAAACA+CGG | 0.681578 | 6_1:+81133875 | None:intergenic |
CTTTACCATTAGATACAGAG+CGG | 0.686766 | 6_1:-81132890 | Msa0894720:intron |
TTAGTAATAGAAGCATCACT+AGG | 0.690439 | 6_1:+81132627 | None:intergenic |
AAGGTTGATAACTCTGCCGG+GGG | 0.699138 | 6_1:-81132462 | Msa0894720:CDS |
GAGATGATAGACACTGAAAG+GGG | 0.702969 | 6_1:+81137752 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAAAAAAAATGAAAATTG+AGG | + | chr6_1:81132397-81132416 | None:intergenic | 10.0% |
!!! | TTTTGATTTTTATTGAATTT+TGG | - | chr6_1:81132445-81132464 | Msa0894720:CDS | 10.0% |
!! | AATAAAAAAAAATGCATAAT+TGG | - | chr6_1:81132807-81132826 | Msa0894720:intron | 10.0% |
!! | AGTTATATATATGTATTATT+TGG | - | chr6_1:81137038-81137057 | Msa0894720:intron | 10.0% |
!!! | TAATTTTACAGATAAGAAAT+TGG | - | chr6_1:81132483-81132502 | Msa0894720:CDS | 15.0% |
!!! | AATTTTACAGATAAGAAATT+GGG | - | chr6_1:81132484-81132503 | Msa0894720:CDS | 15.0% |
!!! | GCATTTTTTTTTATTTTTAC+TGG | + | chr6_1:81132802-81132821 | None:intergenic | 15.0% |
!! | TGAGAAATAAAAAAATAATG+AGG | - | chr6_1:81133101-81133120 | Msa0894720:intron | 15.0% |
!!! | AAATGTAAGTGTTTTATAAA+AGG | + | chr6_1:81135008-81135027 | None:intergenic | 15.0% |
!!! | ACTGTTTTTTCTAAAATAAA+AGG | + | chr6_1:81135186-81135205 | None:intergenic | 15.0% |
!! | ATCATAAATATATTCAATTC+TGG | + | chr6_1:81136232-81136251 | None:intergenic | 15.0% |
!! | AATATATTTATGATCAAGTA+AGG | - | chr6_1:81136238-81136257 | Msa0894720:intron | 15.0% |
!! | ATATATTTATGATCAAGTAA+GGG | - | chr6_1:81136239-81136258 | Msa0894720:intron | 15.0% |
!! | TCTCAAATAAAAGATTTAAA+AGG | + | chr6_1:81136423-81136442 | None:intergenic | 15.0% |
!!! | TTTAAATCTTTTATTTGAGA+AGG | - | chr6_1:81136423-81136442 | Msa0894720:intron | 15.0% |
!! | GAAGATAAATCATAAATTAT+TGG | + | chr6_1:81136450-81136469 | None:intergenic | 15.0% |
!!! | GTTTATTTTCATTTTCATTA+GGG | - | chr6_1:81136481-81136500 | Msa0894720:intron | 15.0% |
!! | TTTAAATGTATGAAACATTT+AGG | - | chr6_1:81137679-81137698 | Msa0894720:five_prime_UTR | 15.0% |
!!! | TTTTATTGAATTTTGGTTAC+TGG | - | chr6_1:81132452-81132471 | Msa0894720:CDS | 20.0% |
!!! | TTTATTGAATTTTGGTTACT+GGG | - | chr6_1:81132453-81132472 | Msa0894720:CDS | 20.0% |
!! | AAAAAAAATGCATAATTGGA+AGG | - | chr6_1:81132811-81132830 | Msa0894720:intron | 20.0% |
!! | TAAAAAAATAATGAGGTAGA+AGG | - | chr6_1:81133108-81133127 | Msa0894720:intron | 20.0% |
!!! | AATTTGCTACATTCTTAATA+GGG | + | chr6_1:81133176-81133195 | None:intergenic | 20.0% |
!!! | TTTATCATTTTCCATGTAAT+GGG | + | chr6_1:81133397-81133416 | None:intergenic | 20.0% |
!!! | ATTTATCATTTTCCATGTAA+TGG | + | chr6_1:81133398-81133417 | None:intergenic | 20.0% |
!! | TCAATGATTGGAATATATAA+AGG | + | chr6_1:81133515-81133534 | None:intergenic | 20.0% |
!! | TAAAAACTAATTGGTATTAG+TGG | - | chr6_1:81133741-81133760 | Msa0894720:intron | 20.0% |
!! | AACAAATTGATTAGAGAAAA+GGG | + | chr6_1:81134471-81134490 | None:intergenic | 20.0% |
!!! | TCTCGTTTTTTATACAATAT+TGG | + | chr6_1:81134795-81134814 | None:intergenic | 20.0% |
!!! | TTATAAAAGGTAAGGTATTT+CGG | + | chr6_1:81134995-81135014 | None:intergenic | 20.0% |
!!! | TAAGTGTTTTATAAAAGGTA+AGG | + | chr6_1:81135003-81135022 | None:intergenic | 20.0% |
!!! | TTTTTCTAAAATAAAAGGCA+TGG | + | chr6_1:81135181-81135200 | None:intergenic | 20.0% |
!!! | TTGAGTTTTCAACATTTATT+TGG | + | chr6_1:81135512-81135531 | None:intergenic | 20.0% |
!! | TATATTTATGATCAAGTAAG+GGG | - | chr6_1:81136240-81136259 | Msa0894720:intron | 20.0% |
!! | ACAGTGTAAAGATAATATTT+AGG | - | chr6_1:81136368-81136387 | Msa0894720:intron | 20.0% |
!! | TAAAGATAATATTTAGGAGT+GGG | - | chr6_1:81136374-81136393 | Msa0894720:intron | 20.0% |
!! | AATGAAAATGAAAATAAACG+AGG | + | chr6_1:81136480-81136499 | None:intergenic | 20.0% |
!!! | CGTTTATTTTCATTTTCATT+AGG | - | chr6_1:81136480-81136499 | Msa0894720:intron | 20.0% |
!! | AGAATTGATTATATCATGTT+TGG | - | chr6_1:81136554-81136573 | Msa0894720:intron | 20.0% |
!! | CAGAATTTAACAATAACTTT+AGG | - | chr6_1:81136656-81136675 | Msa0894720:intron | 20.0% |
!!! | ATCTATATTTTTTGCAATAC+AGG | - | chr6_1:81137227-81137246 | Msa0894720:intron | 20.0% |
!! | AAAAGAAGAAAATCAAGAAT+TGG | - | chr6_1:81137713-81137732 | Msa0894720:five_prime_UTR | 20.0% |
! | GAGAATTATATATACCTTTG+GGG | + | chr6_1:81132375-81132394 | None:intergenic | 25.0% |
! | GGAGAATTATATATACCTTT+GGG | + | chr6_1:81132376-81132395 | None:intergenic | 25.0% |
! | AGGAGAATTATATATACCTT+TGG | + | chr6_1:81132377-81132396 | None:intergenic | 25.0% |
! | AGAAGATATACTTACTTACT+TGG | - | chr6_1:81132719-81132738 | Msa0894720:intron | 25.0% |
!! | GAATAAGCTTTGTAATTTGT+AGG | - | chr6_1:81133135-81133154 | Msa0894720:intron | 25.0% |
!!! | CAATTTGCTACATTCTTAAT+AGG | + | chr6_1:81133177-81133196 | None:intergenic | 25.0% |
! | CTATTAAGAATGTAGCAAAT+TGG | - | chr6_1:81133175-81133194 | Msa0894720:intron | 25.0% |
! | TTCTTCTTTGATTGTGTATT+CGG | - | chr6_1:81133221-81133240 | Msa0894720:intron | 25.0% |
! | GATTAATATAACCCATTACA+TGG | - | chr6_1:81133383-81133402 | Msa0894720:intron | 25.0% |
!! | AGTTTTTACTGTGGTTTTTT+TGG | + | chr6_1:81133729-81133748 | None:intergenic | 25.0% |
! | AAACCACAGTAAAAACTAAT+TGG | - | chr6_1:81133732-81133751 | Msa0894720:intron | 25.0% |
!!! | ATACCAATTAGTTTTTACTG+TGG | + | chr6_1:81133738-81133757 | None:intergenic | 25.0% |
!! | TTCTTTACATGATTCAGTTT+TGG | - | chr6_1:81134126-81134145 | Msa0894720:intron | 25.0% |
!! | TCTTTACATGATTCAGTTTT+GGG | - | chr6_1:81134127-81134146 | Msa0894720:intron | 25.0% |
! | TACCAATTAATGCAGTATAA+GGG | - | chr6_1:81134211-81134230 | Msa0894720:intron | 25.0% |
! | GGAAATAGTAAATGATACTA+TGG | - | chr6_1:81134275-81134294 | Msa0894720:intron | 25.0% |
! | TAGTAAATGATACTATGGAA+AGG | - | chr6_1:81134280-81134299 | Msa0894720:intron | 25.0% |
! | AGTAAATGATACTATGGAAA+GGG | - | chr6_1:81134281-81134300 | Msa0894720:intron | 25.0% |
! | AACAAGTTTACAGGAAAATA+AGG | - | chr6_1:81134318-81134337 | Msa0894720:intron | 25.0% |
! | CCAATGATTGCAATATATAA+CGG | + | chr6_1:81134402-81134421 | None:intergenic | 25.0% |
! | CAACAAATTGATTAGAGAAA+AGG | + | chr6_1:81134472-81134491 | None:intergenic | 25.0% |
!! | CTTTTCTCTAATCAATTTGT+TGG | - | chr6_1:81134470-81134489 | Msa0894720:intron | 25.0% |
!!! | ACCATAACAAGTTGTTTTTT+TGG | - | chr6_1:81134528-81134547 | Msa0894720:intron | 25.0% |
!!! | CCATAACAAGTTGTTTTTTT+GGG | - | chr6_1:81134529-81134548 | Msa0894720:intron | 25.0% |
! | ATTGTATAAAAAACGAGATC+TGG | - | chr6_1:81134797-81134816 | Msa0894720:intron | 25.0% |
! | AATTAGGTTAAACTTGTAGA+AGG | - | chr6_1:81134937-81134956 | Msa0894720:intron | 25.0% |
!! | TTCAATGAGCTAATTACTTT+TGG | + | chr6_1:81135559-81135578 | None:intergenic | 25.0% |
! | AAGTAATTAGCTCATTGAAT+TGG | - | chr6_1:81135560-81135579 | Msa0894720:intron | 25.0% |
! | AGAAAGGAAATGAACATAAA+AGG | + | chr6_1:81136047-81136066 | None:intergenic | 25.0% |
! | TTCTTAAAACTGCTTGAAAA+CGG | - | chr6_1:81136193-81136212 | Msa0894720:intron | 25.0% |
! | GTAAAGATAATATTTAGGAG+TGG | - | chr6_1:81136373-81136392 | Msa0894720:intron | 25.0% |
! | AAAATGAAAATAAACGAGGA+TGG | + | chr6_1:81136476-81136495 | None:intergenic | 25.0% |
!!! | TGAAATACTGGTTTCAATTT+TGG | - | chr6_1:81136506-81136525 | Msa0894720:intron | 25.0% |
! | TTCAAATAGAATCCACTTTA+AGG | - | chr6_1:81136700-81136719 | Msa0894720:intron | 25.0% |
! | ATAAGTAGCAATAACTTATC+AGG | - | chr6_1:81136732-81136751 | Msa0894720:intron | 25.0% |
!!! | GAGATTAGATTTTTTTATCG+TGG | - | chr6_1:81136846-81136865 | Msa0894720:intron | 25.0% |
!! | TTTTCCTTTTTCCTATTTCA+TGG | - | chr6_1:81136950-81136969 | Msa0894720:intron | 25.0% |
! | AAATATAGCTTCCATGAAAT+AGG | + | chr6_1:81136964-81136983 | None:intergenic | 25.0% |
! | GTATTAAATTGTAGTGAAGA+TGG | - | chr6_1:81137644-81137663 | Msa0894720:exon | 25.0% |
AAGAAGATAGATAGAGAGAA+TGG | + | chr6_1:81132268-81132287 | None:intergenic | 30.0% | |
!! | ATTATATATACCTTTGGGGT+CGG | + | chr6_1:81132371-81132390 | None:intergenic | 30.0% |
ACAGATAAGAAATTGGGTAA+AGG | - | chr6_1:81132490-81132509 | Msa0894720:CDS | 30.0% | |
AAAAAAAACAGAGAGAGAGA+AGG | + | chr6_1:81132585-81132604 | None:intergenic | 30.0% | |
CTTCAACTACAGTAACAAAT+AGG | + | chr6_1:81132621-81132640 | None:intergenic | 30.0% | |
! | AGATATATGTTTTGCAATCG+CGG | - | chr6_1:81132929-81132948 | Msa0894720:intron | 30.0% |
ATTCTTAATAGGGAGTTCAA+AGG | + | chr6_1:81133166-81133185 | None:intergenic | 30.0% | |
TCTTCTTTGATTGTGTATTC+GGG | - | chr6_1:81133222-81133241 | Msa0894720:intron | 30.0% | |
! | TACTGCATTAATTGGTAGTT+CGG | + | chr6_1:81133281-81133300 | None:intergenic | 30.0% |
TACCAATTAATGCAGTAAAC+AGG | - | chr6_1:81133284-81133303 | Msa0894720:intron | 30.0% | |
TTCCTGTTTACTGCATTAAT+TGG | + | chr6_1:81133289-81133308 | None:intergenic | 30.0% | |
TGTAAATAGTAATCAGACCA+TGG | - | chr6_1:81133347-81133366 | Msa0894720:intron | 30.0% | |
GTAAATAGTAATCAGACCAT+GGG | - | chr6_1:81133348-81133367 | Msa0894720:intron | 30.0% | |
GGAAGTTTGATAAAAGAAGT+GGG | + | chr6_1:81133494-81133513 | None:intergenic | 30.0% | |
AGGAAGTTTGATAAAAGAAG+TGG | + | chr6_1:81133495-81133514 | None:intergenic | 30.0% | |
GTCGAAAATATGTCAATGAT+TGG | + | chr6_1:81133527-81133546 | None:intergenic | 30.0% | |
!! | TTTTCTATGAGAGGTTTTGA+CGG | + | chr6_1:81133618-81133637 | None:intergenic | 30.0% |
AAACCTCTCATAGAAAACAA+CGG | - | chr6_1:81133621-81133640 | Msa0894720:intron | 30.0% | |
! | TGACTTCTTTAGAGATTTCT+CGG | + | chr6_1:81133661-81133680 | None:intergenic | 30.0% |
AACAACAACACTGATAATCA+CGG | - | chr6_1:81133837-81133856 | Msa0894720:CDS | 30.0% | |
AGAATCATCACAAGAGAATA+TGG | - | chr6_1:81133904-81133923 | Msa0894720:CDS | 30.0% | |
TTACAATGGTACTTTCATCA+AGG | + | chr6_1:81134165-81134184 | None:intergenic | 30.0% | |
!! | TGATGAAAGTACCATTGTAA+TGG | - | chr6_1:81134165-81134184 | Msa0894720:intron | 30.0% |
AAGTACCATTGTAATGGTTA+TGG | - | chr6_1:81134171-81134190 | Msa0894720:intron | 30.0% | |
! | ATTGGTAGTTCAGATCTTTA+AGG | + | chr6_1:81134198-81134217 | None:intergenic | 30.0% |
CTACCAATTAATGCAGTATA+AGG | - | chr6_1:81134210-81134229 | Msa0894720:intron | 30.0% | |
TTCCCTTATACTGCATTAAT+TGG | + | chr6_1:81134216-81134235 | None:intergenic | 30.0% | |
ATACTATGGAAAGGGAAATA+TGG | - | chr6_1:81134289-81134308 | Msa0894720:intron | 30.0% | |
! | TGGATTGATAACAAGTTTAC+AGG | - | chr6_1:81134309-81134328 | Msa0894720:intron | 30.0% |
CCGTTATATATTGCAATCAT+TGG | - | chr6_1:81134399-81134418 | Msa0894720:intron | 30.0% | |
!! | CCCAAAAAAACAACTTGTTA+TGG | + | chr6_1:81134532-81134551 | None:intergenic | 30.0% |
!! | CGTGTTTTGTTAAAAGAAGA+AGG | + | chr6_1:81135107-81135126 | None:intergenic | 30.0% |
ATAATCGATGACAAGACAAT+AGG | + | chr6_1:81135462-81135481 | None:intergenic | 30.0% | |
TGTAAAAATAGAACTTCCGA+TGG | + | chr6_1:81135488-81135507 | None:intergenic | 30.0% | |
AGATGTATGTGAAAGAAACA+CGG | + | chr6_1:81136083-81136102 | None:intergenic | 30.0% | |
TGTTTCTTTCACATACATCT+TGG | - | chr6_1:81136083-81136102 | Msa0894720:intron | 30.0% | |
! | AACATACTAGTTTGACTGAA+TGG | + | chr6_1:81136283-81136302 | None:intergenic | 30.0% |
TTCAGTCAAACTAGTATGTT+TGG | - | chr6_1:81136283-81136302 | Msa0894720:intron | 30.0% | |
TTCATTAGGGATTGAAATAC+TGG | - | chr6_1:81136494-81136513 | Msa0894720:intron | 30.0% | |
!!! | AATACTGGTTTCAATTTTGG+AGG | - | chr6_1:81136509-81136528 | Msa0894720:intron | 30.0% |
! | AAGCTAGAATTTGTAGCTTT+TGG | + | chr6_1:81136682-81136701 | None:intergenic | 30.0% |
TATCAGAATTCTCCTTAAAG+TGG | + | chr6_1:81136715-81136734 | None:intergenic | 30.0% | |
CTTATCAGGCAAACTATTTA+AGG | - | chr6_1:81136746-81136765 | Msa0894720:intron | 30.0% | |
TAAGGAGAATTTGTAGCTAT+TGG | - | chr6_1:81136764-81136783 | Msa0894720:intron | 30.0% | |
! | TGTTAAGATTGCTACTTATC+AGG | - | chr6_1:81136814-81136833 | Msa0894720:intron | 30.0% |
TATCGTGGACAAATCTTAAT+AGG | - | chr6_1:81136861-81136880 | Msa0894720:intron | 30.0% | |
! | AAAAAAGCTTTGGTTTCATG+TGG | + | chr6_1:81136917-81136936 | None:intergenic | 30.0% |
ATCACGTGTTAAAAAAGCTT+TGG | + | chr6_1:81136927-81136946 | None:intergenic | 30.0% | |
!! | TTAGTAATAGAAGCATCACT+AGG | + | chr6_1:81137331-81137350 | None:intergenic | 30.0% |
!! | AGAATGTTTGACTTGTTTAG+AGG | - | chr6_1:81137619-81137638 | Msa0894720:CDS | 30.0% |
GTATGAAACATTTAGGAAGA+AGG | - | chr6_1:81137686-81137705 | Msa0894720:five_prime_UTR | 30.0% | |
AAAAAAAAACTGGCACATCA+GGG | + | chr6_1:81137799-81137818 | None:intergenic | 30.0% | |
TAAAAAAAAACTGGCACATC+AGG | + | chr6_1:81137800-81137819 | None:intergenic | 30.0% | |
TGAGATGATAGACACTGAAA+GGG | + | chr6_1:81132207-81132226 | None:intergenic | 35.0% | |
ATGAGATGATAGACACTGAA+AGG | + | chr6_1:81132208-81132227 | None:intergenic | 35.0% | |
GCAGAAATCGTAGTTGATTA+TGG | - | chr6_1:81132312-81132331 | Msa0894720:three_prime_UTR | 35.0% | |
AAATCGTAGTTGATTATGGC+AGG | - | chr6_1:81132316-81132335 | Msa0894720:three_prime_UTR | 35.0% | |
GGAATTACATGTGTTAGTGT+CGG | - | chr6_1:81132832-81132851 | Msa0894720:CDS | 35.0% | |
! | AAGGTTGATCTCTTAGCATA+TGG | + | chr6_1:81132892-81132911 | None:intergenic | 35.0% |
CATATATCTCCTCACTCATT+AGG | + | chr6_1:81132918-81132937 | None:intergenic | 35.0% | |
ATCAAAGAAGAAAACCAGCA+AGG | + | chr6_1:81133213-81133232 | None:intergenic | 35.0% | |
CTTCTTTGATTGTGTATTCG+GGG | - | chr6_1:81133223-81133242 | Msa0894720:intron | 35.0% | |
TTCTTTGATTGTGTATTCGG+GGG | - | chr6_1:81133224-81133243 | Msa0894720:intron | 35.0% | |
AATCAATATTTCCCTTCCCA+TGG | + | chr6_1:81133367-81133386 | None:intergenic | 35.0% | |
!! | ATAGAAGGTACTTAGAGAGA+AGG | - | chr6_1:81133440-81133459 | Msa0894720:intron | 35.0% |
AGTTTGATAAAAGAAGTGGG+TGG | + | chr6_1:81133491-81133510 | None:intergenic | 35.0% | |
GATGAGTAATAGCATTGTGA+TGG | - | chr6_1:81133590-81133609 | Msa0894720:intron | 35.0% | |
! | ATTTCTCGGTTTCGATTTTG+GGG | + | chr6_1:81133647-81133666 | None:intergenic | 35.0% |
! | GATTTCTCGGTTTCGATTTT+GGG | + | chr6_1:81133648-81133667 | None:intergenic | 35.0% |
! | AGATTTCTCGGTTTCGATTT+TGG | + | chr6_1:81133649-81133668 | None:intergenic | 35.0% |
CTAATTGGTATTAGTGGTAG+CGG | - | chr6_1:81133747-81133766 | Msa0894720:intron | 35.0% | |
!! | AGTGTTGTTGTTTGACGATT+TGG | + | chr6_1:81133829-81133848 | None:intergenic | 35.0% |
TTATTACGTTGTTGTCACTC+AGG | + | chr6_1:81133885-81133904 | None:intergenic | 35.0% | |
AGAAAGCCATAGATGATGTT+CGG | + | chr6_1:81133960-81133979 | None:intergenic | 35.0% | |
!!! | ATGATTCAGTTTTGGGAGTT+GGG | - | chr6_1:81134134-81134153 | Msa0894720:intron | 35.0% |
AAGGTCCATAACCATTACAA+TGG | + | chr6_1:81134179-81134198 | None:intergenic | 35.0% | |
AGAGATTCCTTCATTCCAAT+TGG | + | chr6_1:81134239-81134258 | None:intergenic | 35.0% | |
TCTCTGTATCACTTTCTCAA+TGG | - | chr6_1:81134254-81134273 | Msa0894720:intron | 35.0% | |
TAACGGAAGTTTGAGAAGAT+AGG | + | chr6_1:81134385-81134404 | None:intergenic | 35.0% | |
TCTGTTAGCAATTCTCTGAA+TGG | - | chr6_1:81134429-81134448 | Msa0894720:intron | 35.0% | |
!! | TCAATTTGTTGGCTCTACTT+TGG | - | chr6_1:81134481-81134500 | Msa0894720:intron | 35.0% |
ACGACATAAACAGTGTTTAG+TGG | - | chr6_1:81134560-81134579 | Msa0894720:intron | 35.0% | |
CTTGGTTACAATGATCTACT+TGG | + | chr6_1:81134648-81134667 | None:intergenic | 35.0% | |
CAAGTAGATCATTGTAACCA+AGG | - | chr6_1:81134646-81134665 | Msa0894720:intron | 35.0% | |
GTAGATTGAGAAGAGAAACA+CGG | - | chr6_1:81134828-81134847 | Msa0894720:intron | 35.0% | |
TAGAAGGCTTATCTCTTGTT+TGG | - | chr6_1:81134953-81134972 | Msa0894720:intron | 35.0% | |
! | AGAAGGCTTATCTCTTGTTT+GGG | - | chr6_1:81134954-81134973 | Msa0894720:intron | 35.0% |
! | AGGTAAGGTATTTCGGTATT+GGG | + | chr6_1:81134988-81135007 | None:intergenic | 35.0% |
! | AAGGTAAGGTATTTCGGTAT+TGG | + | chr6_1:81134989-81135008 | None:intergenic | 35.0% |
TTACAACATTGCCTTTGAGT+AGG | - | chr6_1:81135324-81135343 | Msa0894720:intron | 35.0% | |
TTGATTGTAACCGCTTATGT+AGG | - | chr6_1:81135431-81135450 | Msa0894720:intron | 35.0% | |
TGATTGTAACCGCTTATGTA+GGG | - | chr6_1:81135432-81135451 | Msa0894720:intron | 35.0% | |
! | TGTCATCGATTATTGTCCAT+CGG | - | chr6_1:81135469-81135488 | Msa0894720:intron | 35.0% |
TGACATTCGTTCTCAATTGA+TGG | - | chr6_1:81135591-81135610 | Msa0894720:intron | 35.0% | |
GACATTCGTTCTCAATTGAT+GGG | - | chr6_1:81135592-81135611 | Msa0894720:intron | 35.0% | |
! | AACAGACAAACAAAGCATTC+TGG | + | chr6_1:81135632-81135651 | None:intergenic | 35.0% |
! | AAAGTTTAAGTTTGCAGCCT+TGG | - | chr6_1:81135916-81135935 | Msa0894720:intron | 35.0% |
TGACGATCTACTATATCTCA+AGG | - | chr6_1:81135943-81135962 | Msa0894720:intron | 35.0% | |
ACTATATCTCAAGGAGCAAA+TGG | - | chr6_1:81135952-81135971 | Msa0894720:intron | 35.0% | |
GATGTATGTGAAAGAAACAC+GGG | + | chr6_1:81136082-81136101 | None:intergenic | 35.0% | |
!!! | CAGACACAATTTTTTGTTCC+TGG | - | chr6_1:81136109-81136128 | Msa0894720:intron | 35.0% |
ATTTATGATCAAGTAAGGGG+AGG | - | chr6_1:81136243-81136262 | Msa0894720:intron | 35.0% | |
TCAAACTAGTATGTTTGGTC+TGG | - | chr6_1:81136288-81136307 | Msa0894720:intron | 35.0% | |
GCTTCCATGAAATAGGAAAA+AGG | + | chr6_1:81136957-81136976 | None:intergenic | 35.0% | |
CTTTACCATTAGATACAGAG+CGG | - | chr6_1:81137065-81137084 | Msa0894720:intron | 35.0% | |
ATACACTGAAACCAGAAAAC+AGG | + | chr6_1:81137200-81137219 | None:intergenic | 35.0% | |
GAGATGATAGACACTGAAAG+GGG | + | chr6_1:81132206-81132225 | None:intergenic | 40.0% | |
CGTCTGTGTTAGTACTTCAT+AGG | + | chr6_1:81132747-81132766 | None:intergenic | 40.0% | |
AACCTTTCACCTAATGAGTG+AGG | - | chr6_1:81132906-81132925 | Msa0894720:intron | 40.0% | |
! | ATATGTTTTGCAATCGCGGT+TGG | - | chr6_1:81132933-81132952 | Msa0894720:intron | 40.0% |
CTTAATAGGGAGTTCAAAGG+AGG | + | chr6_1:81133163-81133182 | None:intergenic | 40.0% | |
ATGCAGTAAACAGGAACCAA+TGG | - | chr6_1:81133293-81133312 | Msa0894720:intron | 40.0% | |
TGCAGTAAACAGGAACCAAT+GGG | - | chr6_1:81133294-81133313 | Msa0894720:intron | 40.0% | |
AGAAATCCCTTCATTCCCAT+TGG | + | chr6_1:81133312-81133331 | None:intergenic | 40.0% | |
ATAGTAATCAGACCATGGGA+AGG | - | chr6_1:81133352-81133371 | Msa0894720:intron | 40.0% | |
TAGTAATCAGACCATGGGAA+GGG | - | chr6_1:81133353-81133372 | Msa0894720:intron | 40.0% | |
TCTAAGTACCTTCTATTCCC+TGG | + | chr6_1:81133436-81133455 | None:intergenic | 40.0% | |
ATAAAAGAAGTGGGTGGAAG+TGG | + | chr6_1:81133485-81133504 | None:intergenic | 40.0% | |
! | CATTGACATATTTTCGACCG+AGG | - | chr6_1:81133529-81133548 | Msa0894720:intron | 40.0% |
ACTCAGTCTGGTGATTATAG+TGG | - | chr6_1:81133568-81133587 | Msa0894720:intron | 40.0% | |
AAAGAAGTCAGACTTGTCAG+AGG | - | chr6_1:81133671-81133690 | Msa0894720:intron | 40.0% | |
AAGAAGTCAGACTTGTCAGA+GGG | - | chr6_1:81133672-81133691 | Msa0894720:intron | 40.0% | |
TCGAATGCAAGGAACATATC+AGG | - | chr6_1:81133798-81133817 | Msa0894720:intron | 40.0% | |
AATGCAAGGAACATATCAGG+TGG | - | chr6_1:81133801-81133820 | Msa0894720:intron | 40.0% | |
AGTCAGGGAGAAGAACTTAA+AGG | + | chr6_1:81133986-81134005 | None:intergenic | 40.0% | |
AAGTTCTTCTCCCTGACTTA+AGG | - | chr6_1:81133988-81134007 | Msa0894720:CDS | 40.0% | |
!! | TAGGAAGTATCAATCTCCTC+TGG | - | chr6_1:81134066-81134085 | Msa0894720:intron | 40.0% |
!!! | CATGATTCAGTTTTGGGAGT+TGG | - | chr6_1:81134133-81134152 | Msa0894720:intron | 40.0% |
!!! | TGATTCAGTTTTGGGAGTTG+GGG | - | chr6_1:81134135-81134154 | Msa0894720:intron | 40.0% |
TGCAGTATAAGGGAACCAAT+TGG | - | chr6_1:81134221-81134240 | Msa0894720:intron | 40.0% | |
AAGGGAACCAATTGGAATGA+AGG | - | chr6_1:81134229-81134248 | Msa0894720:intron | 40.0% | |
!!! | GTCGTTTTTGGTGATTTCGT+GGG | - | chr6_1:81134751-81134770 | Msa0894720:intron | 40.0% |
!!! | CTTGTTTTCTGTTTCTGCTG+CGG | - | chr6_1:81134883-81134902 | Msa0894720:intron | 40.0% |
GAAGAGGACTAGGTCAAATT+AGG | - | chr6_1:81134921-81134940 | Msa0894720:intron | 40.0% | |
! | TATTTCGGTATTGGGCCTTA+GGG | + | chr6_1:81134980-81134999 | None:intergenic | 40.0% |
GTTCGTAAGAACCTACTCAA+AGG | + | chr6_1:81135338-81135357 | None:intergenic | 40.0% | |
CGGTTACAATCAATGTAGTC+AGG | + | chr6_1:81135424-81135443 | None:intergenic | 40.0% | |
ATAGGTATGCCCTACATAAG+CGG | + | chr6_1:81135444-81135463 | None:intergenic | 40.0% | |
TTGTATCAACCAGCCAATAG+AGG | + | chr6_1:81135732-81135751 | None:intergenic | 40.0% | |
GTGTACTTGCATAGCTATCT+TGG | + | chr6_1:81136350-81136369 | None:intergenic | 40.0% | |
CGCTCTGTATCTAATGGTAA+AGG | + | chr6_1:81137067-81137086 | None:intergenic | 40.0% | |
!! | AATGGTAAAGGTACTGATGC+AGG | + | chr6_1:81137111-81137130 | None:intergenic | 40.0% |
AAACCAGAAAACAGGCATAG+GGG | + | chr6_1:81137192-81137211 | None:intergenic | 40.0% | |
GAAACCAGAAAACAGGCATA+GGG | + | chr6_1:81137193-81137212 | None:intergenic | 40.0% | |
TGAAACCAGAAAACAGGCAT+AGG | + | chr6_1:81137194-81137213 | None:intergenic | 40.0% | |
TGAAGGTGAAACTAAGCCTA+AGG | - | chr6_1:81137474-81137493 | Msa0894720:intron | 40.0% | |
!! | ATGATTGATGATGCGCTTGA+TGG | - | chr6_1:81137555-81137574 | Msa0894720:intron | 40.0% |
GAAAGGGGTAAAACGAGAAG+AGG | + | chr6_1:81132191-81132210 | None:intergenic | 45.0% | |
! | AGACGTTACTTTCCAACGCA+TGG | - | chr6_1:81132534-81132553 | Msa0894720:CDS | 45.0% |
TTTCCAACGCATGGTTGCAA+AGG | - | chr6_1:81132543-81132562 | Msa0894720:CDS | 45.0% | |
TAACCTTTGCAACCATGCGT+TGG | + | chr6_1:81132549-81132568 | None:intergenic | 45.0% | |
ACTAACACAGACGTGAACAC+CGG | - | chr6_1:81132754-81132773 | Msa0894720:intron | 45.0% | |
TAATGTGTCAGTGTCGTGTC+CGG | + | chr6_1:81132776-81132795 | None:intergenic | 45.0% | |
! | TTAGTGTCGGACACTGACAT+GGG | - | chr6_1:81132845-81132864 | Msa0894720:CDS | 45.0% |
!! | TGGGTTGGTGCTATAGAGAT+TGG | - | chr6_1:81132864-81132883 | Msa0894720:CDS | 45.0% |
CTCCTCACTCATTAGGTGAA+AGG | + | chr6_1:81132911-81132930 | None:intergenic | 45.0% | |
AGCCACTATTGGACAACACT+TGG | - | chr6_1:81133070-81133089 | Msa0894720:intron | 45.0% | |
!! | GGAGCTTTGTTTATCCTTGC+TGG | - | chr6_1:81133196-81133215 | Msa0894720:intron | 45.0% |
ACAGGAACCAATGGGAATGA+AGG | - | chr6_1:81133302-81133321 | Msa0894720:intron | 45.0% | |
CAGGAACCAATGGGAATGAA+GGG | - | chr6_1:81133303-81133322 | Msa0894720:intron | 45.0% | |
AATCTGCTAGAAGCCATACC+AGG | - | chr6_1:81133415-81133434 | Msa0894720:intron | 45.0% | |
ATCTGCTAGAAGCCATACCA+GGG | - | chr6_1:81133416-81133435 | Msa0894720:intron | 45.0% | |
AAGCCATACCAGGGAATAGA+AGG | - | chr6_1:81133425-81133444 | Msa0894720:intron | 45.0% | |
GTACCTTCTATTCCCTGGTA+TGG | + | chr6_1:81133431-81133450 | None:intergenic | 45.0% | |
! | TGACATATTTTCGACCGAGG+TGG | - | chr6_1:81133532-81133551 | Msa0894720:intron | 45.0% |
AGCTGTACTCTAACTCAGTC+TGG | - | chr6_1:81133556-81133575 | Msa0894720:intron | 45.0% | |
GAGTCTATAGACTTAACGCC+AGG | - | chr6_1:81133774-81133793 | Msa0894720:intron | 45.0% | |
ATGTTCCTTGCATTCGAACC+TGG | + | chr6_1:81133795-81133814 | None:intergenic | 45.0% | |
CAACACTGATAATCACGGTC+TGG | - | chr6_1:81133842-81133861 | Msa0894720:CDS | 45.0% | |
ATGTTCGGAGATGCATCTTG+GGG | + | chr6_1:81133945-81133964 | None:intergenic | 45.0% | |
GATGTTCGGAGATGCATCTT+GGG | + | chr6_1:81133946-81133965 | None:intergenic | 45.0% | |
TGATGTTCGGAGATGCATCT+TGG | + | chr6_1:81133947-81133966 | None:intergenic | 45.0% | |
GCATCTCCGAACATCATCTA+TGG | - | chr6_1:81133951-81133970 | Msa0894720:CDS | 45.0% | |
ATCAATCTCCTCTGGCAACA+AGG | - | chr6_1:81134074-81134093 | Msa0894720:intron | 45.0% | |
AATTGTCACCTTGTTGCCAG+AGG | + | chr6_1:81134085-81134104 | None:intergenic | 45.0% | |
GAAGATAGGTGTGTGTGTGT+GGG | + | chr6_1:81134371-81134390 | None:intergenic | 45.0% | |
AGAAGATAGGTGTGTGTGTG+TGG | + | chr6_1:81134372-81134391 | None:intergenic | 45.0% | |
TCATTGTAACCAAGGTAGCC+AGG | - | chr6_1:81134654-81134673 | Msa0894720:intron | 45.0% | |
!! | ACTTTGCTCTGCGTCGTTTT+TGG | - | chr6_1:81134739-81134758 | Msa0894720:intron | 45.0% |
!!! | CGTCGTTTTTGGTGATTTCG+TGG | - | chr6_1:81134750-81134769 | Msa0894720:intron | 45.0% |
!!! | GTGGGCAGATCGAGTTTTTT+TGG | - | chr6_1:81134769-81134788 | Msa0894720:intron | 45.0% |
! | TATCTCTTGTTTGGGCCCTA+AGG | - | chr6_1:81134962-81134981 | Msa0894720:intron | 45.0% |
! | GTATTTCGGTATTGGGCCTT+AGG | + | chr6_1:81134981-81135000 | None:intergenic | 45.0% |
TAAAGTCGGGGAACGTAACA+CGG | + | chr6_1:81135360-81135379 | None:intergenic | 45.0% | |
TGGTGAAGGGATGTAAAGTC+GGG | + | chr6_1:81135373-81135392 | None:intergenic | 45.0% | |
CTGGTGAAGGGATGTAAAGT+CGG | + | chr6_1:81135374-81135393 | None:intergenic | 45.0% | |
AGTTCCTACGTAGGTTCGAT+TGG | + | chr6_1:81135397-81135416 | None:intergenic | 45.0% | |
AAGCAGATGCAAGAAGTTGC+TGG | - | chr6_1:81135750-81135769 | Msa0894720:intron | 45.0% | |
AGCAGATGCAAGAAGTTGCT+GGG | - | chr6_1:81135751-81135770 | Msa0894720:intron | 45.0% | |
AGCGTGGAGGTTATCTTCAT+GGG | - | chr6_1:81135775-81135794 | Msa0894720:intron | 45.0% | |
AGATGAAAGCAAGAGGTGAG+GGG | + | chr6_1:81135856-81135875 | None:intergenic | 45.0% | |
CAGATGAAAGCAAGAGGTGA+GGG | + | chr6_1:81135857-81135876 | None:intergenic | 45.0% | |
TAGTAGATCGTCACTGTCCA+AGG | + | chr6_1:81135936-81135955 | None:intergenic | 45.0% | |
CGGGACTGTTATCTACAGAA+AGG | + | chr6_1:81136063-81136082 | None:intergenic | 45.0% | |
TATGATCAAGTAAGGGGAGG+TGG | - | chr6_1:81136246-81136265 | Msa0894720:intron | 45.0% | |
GGAGGTCAAAAGTGATCTAG+AGG | - | chr6_1:81136527-81136546 | Msa0894720:intron | 45.0% | |
!! | CAGTCTATGCTCGTTTTTGC+TGG | - | chr6_1:81137014-81137033 | Msa0894720:intron | 45.0% |
ACTTGCCGCTCTGTATCTAA+TGG | + | chr6_1:81137073-81137092 | None:intergenic | 45.0% | |
GGCTCAACACGTAATGGTAA+AGG | + | chr6_1:81137123-81137142 | None:intergenic | 45.0% | |
! | TTACCCCTATGCCTGTTTTC+TGG | - | chr6_1:81137186-81137205 | Msa0894720:intron | 45.0% |
AGATTAAACCTAAGCGACCG+AGG | - | chr6_1:81137278-81137297 | Msa0894720:intron | 45.0% | |
GGCTTATTGCCTTCAAACCT+CGG | + | chr6_1:81137298-81137317 | None:intergenic | 45.0% | |
GTCAGGACCAAAGAAAGTTG+AGG | - | chr6_1:81137396-81137415 | Msa0894720:intron | 45.0% | |
GATCGCTCCTCAACTTTCTT+TGG | + | chr6_1:81137406-81137425 | None:intergenic | 45.0% | |
GACTGGATCGAAGAAAGTAG+AGG | - | chr6_1:81137429-81137448 | Msa0894720:CDS | 45.0% | |
!! | CCTAAGGTTGATAACTCTGC+CGG | - | chr6_1:81137490-81137509 | Msa0894720:intron | 45.0% |
!! | CTAAGGTTGATAACTCTGCC+GGG | - | chr6_1:81137491-81137510 | Msa0894720:intron | 45.0% |
!! | TAAGGTTGATAACTCTGCCG+GGG | - | chr6_1:81137492-81137511 | Msa0894720:intron | 45.0% |
! | ATGATGCGCTTGATGGTAGA+TGG | - | chr6_1:81137562-81137581 | Msa0894720:intron | 45.0% |
!!! | TTTTTTTTTTAATGTTTTTA+CGG | - | chr6_1:81132406-81132425 | Msa0894720:exon | 5.0% |
ACCAATCTTACCGACCCCAA+AGG | - | chr6_1:81132358-81132377 | Msa0894720:three_prime_UTR | 50.0% | |
!! | ACCTTTGGGGTCGGTAAGAT+TGG | + | chr6_1:81132362-81132381 | None:intergenic | 50.0% |
! | GTTAGTGTCGGACACTGACA+TGG | - | chr6_1:81132844-81132863 | Msa0894720:CDS | 50.0% |
! | TGTTTTGCAATCGCGGTTGG+CGG | - | chr6_1:81132936-81132955 | Msa0894720:intron | 50.0% |
GGGAAAATTCTGCCACGCTA+TGG | - | chr6_1:81132957-81132976 | Msa0894720:intron | 50.0% | |
CTGCACGATAGAGCCACTAT+TGG | - | chr6_1:81133059-81133078 | Msa0894720:intron | 50.0% | |
! | CGCCAAGTGTTGTCCAATAG+TGG | + | chr6_1:81133075-81133094 | None:intergenic | 50.0% |
!! | GGGGACTCTTTAAAGCGTTG+TGG | - | chr6_1:81133243-81133262 | Msa0894720:intron | 50.0% |
TTAGAGTACAGCTGCCACCT+CGG | + | chr6_1:81133549-81133568 | None:intergenic | 50.0% | |
!! | GGGCCGTTGTTTTCTATGAG+AGG | + | chr6_1:81133627-81133646 | None:intergenic | 50.0% |
TAACGCCAGGTTCGAATGCA+AGG | - | chr6_1:81133787-81133806 | Msa0894720:intron | 50.0% | |
CGTTGTTGTCACTCAGGTCT+CGG | + | chr6_1:81133879-81133898 | None:intergenic | 50.0% | |
!! | TCCCTGACTTAAGGTACTGC+TGG | - | chr6_1:81133997-81134016 | Msa0894720:CDS | 50.0% |
CCCAGCAGTACCTTAAGTCA+GGG | + | chr6_1:81134001-81134020 | None:intergenic | 50.0% | |
!! | CCCTGACTTAAGGTACTGCT+GGG | - | chr6_1:81133998-81134017 | Msa0894720:CDS | 50.0% |
ACCCAGCAGTACCTTAAGTC+AGG | + | chr6_1:81134002-81134021 | None:intergenic | 50.0% | |
!! | ACTTAAGGTACTGCTGGGTC+AGG | - | chr6_1:81134003-81134022 | Msa0894720:CDS | 50.0% |
!! | AAGAGCGTCGTTCAACGTCT+AGG | - | chr6_1:81134047-81134066 | Msa0894720:intron | 50.0% |
TGGGTGGTTGGGGATTAAGT+CGG | + | chr6_1:81134352-81134371 | None:intergenic | 50.0% | |
CTATGGGGAAGAAGAGGACT+AGG | - | chr6_1:81134911-81134930 | Msa0894720:intron | 50.0% | |
TGACCTGTGCATTCAGAGCA+AGG | + | chr6_1:81135133-81135152 | None:intergenic | 50.0% | |
GGTGAAGGGATGTAAAGTCG+GGG | + | chr6_1:81135372-81135391 | None:intergenic | 50.0% | |
! | AGGTTCGATTGGCTGGTGAA+GGG | + | chr6_1:81135386-81135405 | None:intergenic | 50.0% |
! | TAGGTTCGATTGGCTGGTGA+AGG | + | chr6_1:81135387-81135406 | None:intergenic | 50.0% |
TCAGGATCGAGTTCCTACGT+AGG | + | chr6_1:81135406-81135425 | None:intergenic | 50.0% | |
GGGATCTTGGCTTCCTCTAT+TGG | - | chr6_1:81135716-81135735 | Msa0894720:intron | 50.0% | |
TCTTGGCTTCCTCTATTGGC+TGG | - | chr6_1:81135720-81135739 | Msa0894720:intron | 50.0% | |
GCAGATGCAAGAAGTTGCTG+GGG | - | chr6_1:81135752-81135771 | Msa0894720:intron | 50.0% | |
GAGCGTGGAGGTTATCTTCA+TGG | - | chr6_1:81135774-81135793 | Msa0894720:intron | 50.0% | |
GATGAAAGCAAGAGGTGAGG+GGG | + | chr6_1:81135855-81135874 | None:intergenic | 50.0% | |
CCAGATGAAAGCAAGAGGTG+AGG | + | chr6_1:81135858-81135877 | None:intergenic | 50.0% | |
CCTCACCTCTTGCTTTCATC+TGG | - | chr6_1:81135855-81135874 | Msa0894720:intron | 50.0% | |
GAGCACCAGATGAAAGCAAG+AGG | + | chr6_1:81135863-81135882 | None:intergenic | 50.0% | |
CAAGGAGCAAATGGAAGCTG+AGG | - | chr6_1:81135961-81135980 | Msa0894720:intron | 50.0% | |
TCCTGCGTCGCACTGAAAAA+CGG | - | chr6_1:81135999-81136018 | Msa0894720:intron | 50.0% | |
! | GGCTTTGGCTCAACACGTAA+TGG | + | chr6_1:81137129-81137148 | None:intergenic | 50.0% |
AACAGGCATAGGGGTAAGCT+GGG | + | chr6_1:81137183-81137202 | None:intergenic | 50.0% | |
AAACAGGCATAGGGGTAAGC+TGG | + | chr6_1:81137184-81137203 | None:intergenic | 50.0% | |
GCATCACTAGGAGCTTGCAT+TGG | + | chr6_1:81137319-81137338 | None:intergenic | 50.0% | |
GACAACGAGCAGTGTTTGTC+AGG | - | chr6_1:81137379-81137398 | Msa0894720:intron | 50.0% | |
GTTGAGGAGCGATCTTTGAC+TGG | - | chr6_1:81137412-81137431 | Msa0894720:intron | 50.0% | |
TAGAGGAACACCCAGTGTCA+GGG | - | chr6_1:81137446-81137465 | Msa0894720:CDS | 50.0% | |
CTTCATGCAACCCTGACACT+GGG | + | chr6_1:81137459-81137478 | None:intergenic | 50.0% | |
CCGGCAGAGTTATCAACCTT+AGG | + | chr6_1:81137493-81137512 | None:intergenic | 50.0% | |
!! | AAGGTTGATAACTCTGCCGG+GGG | - | chr6_1:81137493-81137512 | Msa0894720:intron | 50.0% |
CATCTGAGCTAGCATATGCC+AGG | + | chr6_1:81137528-81137547 | None:intergenic | 50.0% | |
TGTCGGACACTGACATGGGT+TGG | - | chr6_1:81132849-81132868 | Msa0894720:CDS | 55.0% | |
! | GTTTTGCAATCGCGGTTGGC+GGG | - | chr6_1:81132937-81132956 | Msa0894720:intron | 55.0% |
GCTATTGCAGCTCCATAGCG+TGG | + | chr6_1:81132972-81132991 | None:intergenic | 55.0% | |
GTCAGAGGGAGCAAGATGAG+TGG | - | chr6_1:81133686-81133705 | Msa0894720:intron | 55.0% | |
GGAAGAAACCTGTCCGAACC+AGG | - | chr6_1:81134024-81134043 | Msa0894720:CDS | 55.0% | |
GAACGACGCTCTTCCTGGTT+CGG | + | chr6_1:81134040-81134059 | None:intergenic | 55.0% | |
ACGTTGAACGACGCTCTTCC+TGG | + | chr6_1:81134045-81134064 | None:intergenic | 55.0% | |
TGTGTGTGTGTGGGTGGTTG+GGG | + | chr6_1:81134362-81134381 | None:intergenic | 55.0% | |
GTGTGTGTGTGTGGGTGGTT+GGG | + | chr6_1:81134363-81134382 | None:intergenic | 55.0% | |
GATAGGTGTGTGTGTGTGGG+TGG | + | chr6_1:81134368-81134387 | None:intergenic | 55.0% | |
ATCGTGCGATCCTACGAGCT+GGG | + | chr6_1:81134687-81134706 | None:intergenic | 55.0% | |
AGAGCAAAGTCGAAGCACGG+CGG | + | chr6_1:81134729-81134748 | None:intergenic | 55.0% | |
CGCAGAGCAAAGTCGAAGCA+CGG | + | chr6_1:81134732-81134751 | None:intergenic | 55.0% | |
TTTCTGCTGCGGCAGCTCTA+TGG | - | chr6_1:81134894-81134913 | Msa0894720:intron | 55.0% | |
TTCTGCTGCGGCAGCTCTAT+GGG | - | chr6_1:81134895-81134914 | Msa0894720:intron | 55.0% | |
GCAGCTCTATGGGGAAGAAG+AGG | - | chr6_1:81134905-81134924 | Msa0894720:intron | 55.0% | |
CCTGTGCATTCAGAGCAAGG+TGG | + | chr6_1:81135130-81135149 | None:intergenic | 55.0% | |
! | CCACCTTGCTCTGAATGCAC+AGG | - | chr6_1:81135127-81135146 | Msa0894720:intron | 55.0% |
CCTACGTAGGTTCGATTGGC+TGG | + | chr6_1:81135393-81135412 | None:intergenic | 55.0% | |
CCAGCCAATCGAACCTACGT+AGG | - | chr6_1:81135390-81135409 | Msa0894720:intron | 55.0% | |
! | TTCTGATAACGTGCCCCGAC+AGG | - | chr6_1:81135695-81135714 | Msa0894720:intron | 55.0% |
! | TCTGATAACGTGCCCCGACA+GGG | - | chr6_1:81135696-81135715 | Msa0894720:intron | 55.0% |
AGGAAGCCAAGATCCCTGTC+GGG | + | chr6_1:81135712-81135731 | None:intergenic | 55.0% | |
GAGGAAGCCAAGATCCCTGT+CGG | + | chr6_1:81135713-81135732 | None:intergenic | 55.0% | |
GGAGGTTATCTTCATGGGCG+AGG | - | chr6_1:81135780-81135799 | Msa0894720:intron | 55.0% | |
GGTTATCTTCATGGGCGAGG+CGG | - | chr6_1:81135783-81135802 | Msa0894720:intron | 55.0% | |
!! | GTTTTTCAGTGCGACGCAGG+AGG | + | chr6_1:81136000-81136019 | None:intergenic | 55.0% |
CCTGCGTCGCACTGAAAAAC+GGG | - | chr6_1:81136000-81136019 | Msa0894720:intron | 55.0% | |
ACAGGCATAGGGGTAAGCTG+GGG | + | chr6_1:81137182-81137201 | None:intergenic | 55.0% | |
CCTTCAAACCTCGGTCGCTT+AGG | + | chr6_1:81137289-81137308 | None:intergenic | 55.0% | |
CCTAAGCGACCGAGGTTTGA+AGG | - | chr6_1:81137286-81137305 | Msa0894720:intron | 55.0% | |
GTAGAGGAACACCCAGTGTC+AGG | - | chr6_1:81137445-81137464 | Msa0894720:CDS | 55.0% | |
CCTTCATGCAACCCTGACAC+TGG | + | chr6_1:81137460-81137479 | None:intergenic | 55.0% | |
CCAGTGTCAGGGTTGCATGA+AGG | - | chr6_1:81137457-81137476 | Msa0894720:CDS | 55.0% | |
AACTCTGCCGGGGGATTACT+AGG | - | chr6_1:81137502-81137521 | Msa0894720:intron | 55.0% | |
!! | ACGCTCTTCCTGGTTCGGAC+AGG | + | chr6_1:81134035-81134054 | None:intergenic | 60.0% |
GGTGTGTGTGTGTGGGTGGT+TGG | + | chr6_1:81134364-81134383 | None:intergenic | 60.0% | |
GGACTCGATCCTGGCTACCT+TGG | + | chr6_1:81134666-81134685 | None:intergenic | 60.0% | |
TACGAGCTGGGACTCGATCC+TGG | + | chr6_1:81134675-81134694 | None:intergenic | 60.0% | |
AGGATCGAGTCCCAGCTCGT+AGG | - | chr6_1:81134674-81134693 | Msa0894720:intron | 60.0% | |
GATCGTGCGATCCTACGAGC+TGG | + | chr6_1:81134688-81134707 | None:intergenic | 60.0% | |
AAAGTCGAAGCACGGCGGAG+TGG | + | chr6_1:81134724-81134743 | None:intergenic | 60.0% | |
TCTGCTGCGGCAGCTCTATG+GGG | - | chr6_1:81134896-81134915 | Msa0894720:intron | 60.0% | |
GGAAGCCAAGATCCCTGTCG+GGG | + | chr6_1:81135711-81135730 | None:intergenic | 60.0% | |
CAAGAAGTTGCTGGGGAGCG+TGG | - | chr6_1:81135759-81135778 | Msa0894720:intron | 60.0% | |
!! | CCCGTTTTTCAGTGCGACGC+AGG | + | chr6_1:81136003-81136022 | None:intergenic | 60.0% |
CAGCAGCGAACACAGACTCC+AGG | + | chr6_1:81136130-81136149 | None:intergenic | 60.0% | |
TGCCAGGCCTAGTAATCCCC+CGG | + | chr6_1:81137512-81137531 | None:intergenic | 60.0% | |
ACGTGCCCCGACAGGGATCT+TGG | - | chr6_1:81135703-81135722 | Msa0894720:intron | 65.0% | |
! | GAAGTTGCTGGGGAGCGTGG+AGG | - | chr6_1:81135762-81135781 | Msa0894720:intron | 65.0% |
GGCATAGGGGTAAGCTGGGG+TGG | + | chr6_1:81137179-81137198 | None:intergenic | 65.0% | |
TGCCGGGGGATTACTAGGCC+TGG | - | chr6_1:81137507-81137526 | Msa0894720:intron | 65.0% | |
GAAGCACGGCGGAGTGGCTG+AGG | + | chr6_1:81134718-81134737 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_1 | gene | 81132150 | 81137827 | 81132150 | ID=Msa0894720;Name=Msa0894720 |
chr6_1 | mRNA | 81132150 | 81137827 | 81132150 | ID=Msa0894720-mRNA-1;Parent=Msa0894720;Name=Msa0894720-mRNA-1;_AED=0.22;_eAED=0.22;_QI=181|0.8|0.66|1|0.6|0.66|6|269|261 |
chr6_1 | exon | 81132150 | 81132728 | 81132150 | ID=Msa0894720-mRNA-1:exon:13641;Parent=Msa0894720-mRNA-1 |
chr6_1 | exon | 81132814 | 81132900 | 81132814 | ID=Msa0894720-mRNA-1:exon:13640;Parent=Msa0894720-mRNA-1 |
chr6_1 | exon | 81133825 | 81134044 | 81133825 | ID=Msa0894720-mRNA-1:exon:13639;Parent=Msa0894720-mRNA-1 |
chr6_1 | exon | 81134173 | 81134221 | 81134173 | ID=Msa0894720-mRNA-1:exon:13638;Parent=Msa0894720-mRNA-1 |
chr6_1 | exon | 81137413 | 81137483 | 81137413 | ID=Msa0894720-mRNA-1:exon:13637;Parent=Msa0894720-mRNA-1 |
chr6_1 | exon | 81137598 | 81137827 | 81137598 | ID=Msa0894720-mRNA-1:exon:13636;Parent=Msa0894720-mRNA-1 |
chr6_1 | five_prime_UTR | 81137647 | 81137827 | 81137647 | ID=Msa0894720-mRNA-1:five_prime_utr;Parent=Msa0894720-mRNA-1 |
chr6_1 | CDS | 81137598 | 81137646 | 81137598 | ID=Msa0894720-mRNA-1:cds;Parent=Msa0894720-mRNA-1 |
chr6_1 | CDS | 81137413 | 81137483 | 81137413 | ID=Msa0894720-mRNA-1:cds;Parent=Msa0894720-mRNA-1 |
chr6_1 | CDS | 81134173 | 81134221 | 81134173 | ID=Msa0894720-mRNA-1:cds;Parent=Msa0894720-mRNA-1 |
chr6_1 | CDS | 81133825 | 81134044 | 81133825 | ID=Msa0894720-mRNA-1:cds;Parent=Msa0894720-mRNA-1 |
chr6_1 | CDS | 81132814 | 81132900 | 81132814 | ID=Msa0894720-mRNA-1:cds;Parent=Msa0894720-mRNA-1 |
chr6_1 | CDS | 81132419 | 81132728 | 81132419 | ID=Msa0894720-mRNA-1:cds;Parent=Msa0894720-mRNA-1 |
chr6_1 | three_prime_UTR | 81132150 | 81132418 | 81132150 | ID=Msa0894720-mRNA-1:three_prime_utr;Parent=Msa0894720-mRNA-1 |
Gene Sequence |
Protein sequence |