Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462070 | XP_003591148.1 | 98.214 | 168 | 3 | 0 | 1 | 168 | 1 | 168 | 1.92e-116 | 337 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462070 | sp|Q5J907|TCTP_ELAGV | 90.476 | 168 | 16 | 0 | 1 | 168 | 1 | 168 | 1.63e-109 | 311 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462070 | G7I8P9 | 98.214 | 168 | 3 | 0 | 1 | 168 | 1 | 168 | 9.17e-117 | 337 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002230 | Msa1462070 | 0.821048 | 4.965690e-53 | -8.615850e-47 |
| Msa0006110 | Msa1462070 | 0.810325 | 1.219267e-50 | -8.615850e-47 |
| Msa0011170 | Msa1462070 | 0.810901 | 9.153652e-51 | -8.615850e-47 |
| Msa0014710 | Msa1462070 | 0.834770 | 2.473821e-56 | -8.615850e-47 |
| Msa0020410 | Msa1462070 | 0.816141 | 6.444793e-52 | -8.615850e-47 |
| Msa0021210 | Msa1462070 | 0.819665 | 1.030833e-52 | -8.615850e-47 |
| Msa0029850 | Msa1462070 | 0.830635 | 2.627717e-55 | -8.615850e-47 |
| Msa0032860 | Msa1462070 | 0.847841 | 8.958235e-60 | -8.615850e-47 |
| Msa0032880 | Msa1462070 | 0.894877 | 1.630567e-75 | -8.615850e-47 |
| Msa0036140 | Msa1462070 | 0.807513 | 4.873859e-50 | -8.615850e-47 |
| Msa0037880 | Msa1462070 | 0.835021 | 2.138822e-56 | -8.615850e-47 |
| Msa0040620 | Msa1462070 | 0.806809 | 6.869419e-50 | -8.615850e-47 |
| Msa0057290 | Msa1462070 | 0.807276 | 5.470025e-50 | -8.615850e-47 |
| Msa0058600 | Msa1462070 | 0.815594 | 8.534962e-52 | -8.615850e-47 |
| Msa0061080 | Msa1462070 | 0.800186 | 1.622027e-48 | -8.615850e-47 |
| Msa0063350 | Msa1462070 | -0.814332 | 1.625648e-51 | -8.615850e-47 |
| Msa0075880 | Msa1462070 | 0.826635 | 2.434219e-54 | -8.615850e-47 |
| Msa0077180 | Msa1462070 | 0.819386 | 1.193724e-52 | -8.615850e-47 |
| Msa0078900 | Msa1462070 | 0.805352 | 1.391489e-49 | -8.615850e-47 |
| Msa0086420 | Msa1462070 | 0.805218 | 1.484029e-49 | -8.615850e-47 |
| Msa0089820 | Msa1462070 | 0.804458 | 2.139732e-49 | -8.615850e-47 |
| Msa0104800 | Msa1462070 | 0.800533 | 1.378358e-48 | -8.615850e-47 |
| Msa0114430 | Msa1462070 | 0.825756 | 3.940343e-54 | -8.615850e-47 |
| Msa0117770 | Msa1462070 | 0.802231 | 6.188362e-49 | -8.615850e-47 |
| Msa1345220 | Msa1462070 | 0.830386 | 3.024539e-55 | -8.615850e-47 |
| Msa1348600 | Msa1462070 | 0.810826 | 9.500623e-51 | -8.615850e-47 |
| Msa1348760 | Msa1462070 | 0.807355 | 5.264872e-50 | -8.615850e-47 |
| Msa1353470 | Msa1462070 | 0.806676 | 7.326446e-50 | -8.615850e-47 |
| Msa1357890 | Msa1462070 | 0.829948 | 3.868858e-55 | -8.615850e-47 |
| Msa1359040 | Msa1462070 | 0.801863 | 7.365435e-49 | -8.615850e-47 |
| Msa1364830 | Msa1462070 | 0.832067 | 1.167917e-55 | -8.615850e-47 |
| Msa1373030 | Msa1462070 | 0.821192 | 4.600428e-53 | -8.615850e-47 |
| Msa1374710 | Msa1462070 | 0.822972 | 1.779046e-53 | -8.615850e-47 |
| Msa1376130 | Msa1462070 | 0.807096 | 5.973821e-50 | -8.615850e-47 |
| Msa1377570 | Msa1462070 | 0.802781 | 4.765727e-49 | -8.615850e-47 |
| Msa1394310 | Msa1462070 | 0.822035 | 2.937204e-53 | -8.615850e-47 |
| Msa1397120 | Msa1462070 | 0.841365 | 4.967841e-58 | -8.615850e-47 |
| Msa1398090 | Msa1462070 | 0.834580 | 2.760252e-56 | -8.615850e-47 |
| Msa1403340 | Msa1462070 | 0.825665 | 4.140964e-54 | -8.615850e-47 |
| Msa1403890 | Msa1462070 | 0.840813 | 6.937614e-58 | -8.615850e-47 |
| Msa1406110 | Msa1462070 | -0.810073 | 1.381755e-50 | -8.615850e-47 |
| Msa1420820 | Msa1462070 | 0.815476 | 9.067369e-52 | -8.615850e-47 |
| Msa1424450 | Msa1462070 | 0.808707 | 2.712771e-50 | -8.615850e-47 |
| Msa1427230 | Msa1462070 | 0.812776 | 3.576221e-51 | -8.615850e-47 |
| Msa1444250 | Msa1462070 | -0.824808 | 6.604468e-54 | -8.615850e-47 |
| Msa1451620 | Msa1462070 | -0.833884 | 4.125850e-56 | -8.615850e-47 |
| Msa1453560 | Msa1462070 | 0.832383 | 9.756830e-56 | -8.615850e-47 |
| Msa1460830 | Msa1462070 | 0.806719 | 7.175276e-50 | -8.615850e-47 |
| Msa1462060 | Msa1462070 | 0.810869 | 9.302837e-51 | -8.615850e-47 |
| Msa1462070 | Msa1462930 | 0.807453 | 5.017388e-50 | -8.615850e-47 |
| Msa1462070 | Msa1464940 | 0.802313 | 5.951851e-49 | -8.615850e-47 |
| Msa1462070 | Msa1466540 | 0.804481 | 2.115889e-49 | -8.615850e-47 |
| Msa0613120 | Msa1462070 | 0.808244 | 3.406092e-50 | -8.615850e-47 |
| Msa0613460 | Msa1462070 | 0.819419 | 1.172978e-52 | -8.615850e-47 |
| Msa0620960 | Msa1462070 | 0.832603 | 8.602377e-56 | -8.615850e-47 |
| Msa0626090 | Msa1462070 | 0.812333 | 4.468851e-51 | -8.615850e-47 |
| Msa0626990 | Msa1462070 | 0.802520 | 5.395928e-49 | -8.615850e-47 |
| Msa0637900 | Msa1462070 | 0.801307 | 9.577446e-49 | -8.615850e-47 |
| Msa0651270 | Msa1462070 | 0.801118 | 1.046767e-48 | -8.615850e-47 |
| Msa0659400 | Msa1462070 | 0.803248 | 3.817084e-49 | -8.615850e-47 |
| Msa0672690 | Msa1462070 | 0.820146 | 8.003489e-53 | -8.615850e-47 |
| Msa0693380 | Msa1462070 | 0.807506 | 4.889301e-50 | -8.615850e-47 |
| Msa0698930 | Msa1462070 | 0.801074 | 1.068740e-48 | -8.615850e-47 |
| Msa0703780 | Msa1462070 | 0.800142 | 1.655611e-48 | -8.615850e-47 |
| Msa0709160 | Msa1462070 | 0.812236 | 4.692846e-51 | -8.615850e-47 |
| Msa0711100 | Msa1462070 | 0.802774 | 4.783578e-49 | -8.615850e-47 |
| Msa0711790 | Msa1462070 | 0.823764 | 1.162157e-53 | -8.615850e-47 |
| Msa0721280 | Msa1462070 | 0.827812 | 1.272519e-54 | -8.615850e-47 |
| Msa0723110 | Msa1462070 | 0.803797 | 2.936560e-49 | -8.615850e-47 |
| Msa0731180 | Msa1462070 | 0.807671 | 4.510108e-50 | -8.615850e-47 |
| Msa0745260 | Msa1462070 | -0.806798 | 6.905098e-50 | -8.615850e-47 |
| Msa0747260 | Msa1462070 | 0.843562 | 1.298452e-58 | -8.615850e-47 |
| Msa0747270 | Msa1462070 | 0.854614 | 1.094710e-61 | -8.615850e-47 |
| Msa0751850 | Msa1462070 | 0.818904 | 1.536710e-52 | -8.615850e-47 |
| Msa0761910 | Msa1462070 | 0.804695 | 1.909737e-49 | -8.615850e-47 |
| Msa0763890 | Msa1462070 | 0.820490 | 6.673580e-53 | -8.615850e-47 |
| Msa0763920 | Msa1462070 | 0.810044 | 1.401481e-50 | -8.615850e-47 |
| Msa0768290 | Msa1462070 | 0.803118 | 4.061403e-49 | -8.615850e-47 |
| Msa0773850 | Msa1462070 | 0.810697 | 1.013311e-50 | -8.615850e-47 |
| Msa0777230 | Msa1462070 | 0.814604 | 1.415577e-51 | -8.615850e-47 |
| Msa0784380 | Msa1462070 | 0.810746 | 9.891154e-51 | -8.615850e-47 |
| Msa0794510 | Msa1462070 | -0.803123 | 4.050645e-49 | -8.615850e-47 |
| Msa0801730 | Msa1462070 | 0.800658 | 1.299688e-48 | -8.615850e-47 |
| Msa0801740 | Msa1462070 | 0.813089 | 3.053071e-51 | -8.615850e-47 |
| Msa0810220 | Msa1462070 | 0.811268 | 7.621694e-51 | -8.615850e-47 |
| Msa0817460 | Msa1462070 | 0.827888 | 1.219964e-54 | -8.615850e-47 |
| Msa0818890 | Msa1462070 | 0.811237 | 7.739875e-51 | -8.615850e-47 |
| Msa0820770 | Msa1462070 | 0.803072 | 4.149705e-49 | -8.615850e-47 |
| Msa0820850 | Msa1462070 | 0.842043 | 3.289597e-58 | -8.615850e-47 |
| Msa0831850 | Msa1462070 | 0.800383 | 1.478556e-48 | -8.615850e-47 |
| Msa0832090 | Msa1462070 | 0.837682 | 4.499499e-57 | -8.615850e-47 |
| Msa0832150 | Msa1462070 | 0.813622 | 2.332128e-51 | -8.615850e-47 |
| Msa0125050 | Msa1462070 | 0.815145 | 1.073817e-51 | -8.615850e-47 |
| Msa0131770 | Msa1462070 | 0.803110 | 4.075427e-49 | -8.615850e-47 |
| Msa0137570 | Msa1462070 | 0.814279 | 1.670302e-51 | -8.615850e-47 |
| Msa0138500 | Msa1462070 | 0.806153 | 9.446946e-50 | -8.615850e-47 |
| Msa0138520 | Msa1462070 | 0.805703 | 1.174333e-49 | -8.615850e-47 |
| Msa0140860 | Msa1462070 | 0.823483 | 1.351965e-53 | -8.615850e-47 |
| Msa0145190 | Msa1462070 | 0.837242 | 5.832948e-57 | -8.615850e-47 |
| Msa0145310 | Msa1462070 | 0.800860 | 1.181947e-48 | -8.615850e-47 |
| Msa0153830 | Msa1462070 | 0.819647 | 1.040597e-52 | -8.615850e-47 |
| Msa0159770 | Msa1462070 | 0.804231 | 2.385446e-49 | -8.615850e-47 |
| Msa0161900 | Msa1462070 | 0.801591 | 8.377739e-49 | -8.615850e-47 |
| Msa0169820 | Msa1462070 | 0.829926 | 3.916009e-55 | -8.615850e-47 |
| Msa0171120 | Msa1462070 | 0.815247 | 1.019436e-51 | -8.615850e-47 |
| Msa0171540 | Msa1462070 | 0.812379 | 4.366920e-51 | -8.615850e-47 |
| Msa0178510 | Msa1462070 | 0.801266 | 9.766757e-49 | -8.615850e-47 |
| Msa0178860 | Msa1462070 | -0.810842 | 9.427111e-51 | -8.615850e-47 |
| Msa0178930 | Msa1462070 | 0.806994 | 6.278268e-50 | -8.615850e-47 |
| Msa0183010 | Msa1462070 | -0.815928 | 7.190836e-52 | -8.615850e-47 |
| Msa0187220 | Msa1462070 | 0.803440 | 3.482505e-49 | -8.615850e-47 |
| Msa0187230 | Msa1462070 | 0.856360 | 3.390388e-62 | -8.615850e-47 |
| Msa0187250 | Msa1462070 | 0.879191 | 1.524276e-69 | -8.615850e-47 |
| Msa0187950 | Msa1462070 | 0.812472 | 4.167088e-51 | -8.615850e-47 |
| Msa0194440 | Msa1462070 | 0.801247 | 9.851014e-49 | -8.615850e-47 |
| Msa0199800 | Msa1462070 | -0.804514 | 2.082400e-49 | -8.615850e-47 |
| Msa0206010 | Msa1462070 | 0.804760 | 1.850673e-49 | -8.615850e-47 |
| Msa0213040 | Msa1462070 | 0.832391 | 9.711427e-56 | -8.615850e-47 |
| Msa0216530 | Msa1462070 | 0.809333 | 1.993257e-50 | -8.615850e-47 |
| Msa0217680 | Msa1462070 | 0.813973 | 1.951921e-51 | -8.615850e-47 |
| Msa0223010 | Msa1462070 | 0.813284 | 2.766809e-51 | -8.615850e-47 |
| Msa0223410 | Msa1462070 | -0.817759 | 2.791005e-52 | -8.615850e-47 |
| Msa0224420 | Msa1462070 | 0.801469 | 8.871387e-49 | -8.615850e-47 |
| Msa0226180 | Msa1462070 | 0.833375 | 5.529489e-56 | -8.615850e-47 |
| Msa0226530 | Msa1462070 | 0.827181 | 1.802569e-54 | -8.615850e-47 |
| Msa0230640 | Msa1462070 | -0.814248 | 1.697002e-51 | -8.615850e-47 |
| Msa1224580 | Msa1462070 | -0.855429 | 6.348346e-62 | -8.615850e-47 |
| Msa1233890 | Msa1462070 | 0.813058 | 3.101924e-51 | -8.615850e-47 |
| Msa1237980 | Msa1462070 | 0.826646 | 2.419876e-54 | -8.615850e-47 |
| Msa1238770 | Msa1462070 | 0.816954 | 4.237636e-52 | -8.615850e-47 |
| Msa1247250 | Msa1462070 | 0.800019 | 1.754070e-48 | -8.615850e-47 |
| Msa1257800 | Msa1462070 | -0.811871 | 5.636837e-51 | -8.615850e-47 |
| Msa1258380 | Msa1462070 | -0.811677 | 6.210950e-51 | -8.615850e-47 |
| Msa1259300 | Msa1462070 | 0.803036 | 4.222058e-49 | -8.615850e-47 |
| Msa1262210 | Msa1462070 | 0.826939 | 2.059618e-54 | -8.615850e-47 |
| Msa1263290 | Msa1462070 | -0.828181 | 1.036660e-54 | -8.615850e-47 |
| Msa1270660 | Msa1462070 | 0.822624 | 2.144330e-53 | -8.615850e-47 |
| Msa1270730 | Msa1462070 | 0.814324 | 1.632268e-51 | -8.615850e-47 |
| Msa1276440 | Msa1462070 | 0.811740 | 6.017303e-51 | -8.615850e-47 |
| Msa1295540 | Msa1462070 | -0.803913 | 2.778229e-49 | -8.615850e-47 |
| Msa1298510 | Msa1462070 | 0.801112 | 1.050042e-48 | -8.615850e-47 |
| Msa1305190 | Msa1462070 | 0.824075 | 9.822911e-54 | -8.615850e-47 |
| Msa1305200 | Msa1462070 | 0.820035 | 8.483161e-53 | -8.615850e-47 |
| Msa1305340 | Msa1462070 | 0.818496 | 1.901546e-52 | -8.615850e-47 |
| Msa1305350 | Msa1462070 | 0.825624 | 4.236007e-54 | -8.615850e-47 |
| Msa1306760 | Msa1462070 | 0.800967 | 1.124161e-48 | -8.615850e-47 |
| Msa1306850 | Msa1462070 | 0.816688 | 4.860987e-52 | -8.615850e-47 |
| Msa1307740 | Msa1462070 | 0.811940 | 5.443369e-51 | -8.615850e-47 |
| Msa1325860 | Msa1462070 | -0.817957 | 2.518698e-52 | -8.615850e-47 |
| Msa1333420 | Msa1462070 | 0.803031 | 4.232979e-49 | -8.615850e-47 |
| Msa1335710 | Msa1462070 | 0.801912 | 7.196249e-49 | -8.615850e-47 |
| Msa0369440 | Msa1462070 | 0.818444 | 1.953820e-52 | -8.615850e-47 |
| Msa0376590 | Msa1462070 | 0.806752 | 7.061925e-50 | -8.615850e-47 |
| Msa0376910 | Msa1462070 | 0.826888 | 2.118631e-54 | -8.615850e-47 |
| Msa0379640 | Msa1462070 | 0.803810 | 2.918016e-49 | -8.615850e-47 |
| Msa0381600 | Msa1462070 | -0.819655 | 1.036480e-52 | -8.615850e-47 |
| Msa0381610 | Msa1462070 | -0.807962 | 3.911725e-50 | -8.615850e-47 |
| Msa0387280 | Msa1462070 | 0.812109 | 5.003043e-51 | -8.615850e-47 |
| Msa0389810 | Msa1462070 | 0.820930 | 5.288363e-53 | -8.615850e-47 |
| Msa0392040 | Msa1462070 | -0.817262 | 3.612953e-52 | -8.615850e-47 |
| Msa0394260 | Msa1462070 | 0.811584 | 6.508853e-51 | -8.615850e-47 |
| Msa0394340 | Msa1462070 | 0.814218 | 1.722984e-51 | -8.615850e-47 |
| Msa0401560 | Msa1462070 | 0.810613 | 1.056446e-50 | -8.615850e-47 |
| Msa0405370 | Msa1462070 | 0.810556 | 1.086721e-50 | -8.615850e-47 |
| Msa0410300 | Msa1462070 | 0.808471 | 3.047666e-50 | -8.615850e-47 |
| Msa0412840 | Msa1462070 | 0.842210 | 2.972283e-58 | -8.615850e-47 |
| Msa0415980 | Msa1462070 | 0.819293 | 1.253350e-52 | -8.615850e-47 |
| Msa0425790 | Msa1462070 | 0.821166 | 4.664311e-53 | -8.615850e-47 |
| Msa0426900 | Msa1462070 | 0.823852 | 1.108211e-53 | -8.615850e-47 |
| Msa0433410 | Msa1462070 | -0.840700 | 7.424029e-58 | -8.615850e-47 |
| Msa0442200 | Msa1462070 | 0.801256 | 9.808892e-49 | -8.615850e-47 |
| Msa0453200 | Msa1462070 | 0.823783 | 1.150151e-53 | -8.615850e-47 |
| Msa0457510 | Msa1462070 | 0.828873 | 7.058766e-55 | -8.615850e-47 |
| Msa0468130 | Msa1462070 | 0.806032 | 1.001495e-49 | -8.615850e-47 |
| Msa0469940 | Msa1462070 | -0.847246 | 1.305590e-59 | -8.615850e-47 |
| Msa0471900 | Msa1462070 | 0.837501 | 5.008787e-57 | -8.615850e-47 |
| Msa0472960 | Msa1462070 | -0.823908 | 1.075290e-53 | -8.615850e-47 |
| Msa0477130 | Msa1462070 | -0.845313 | 4.389967e-59 | -8.615850e-47 |
| Msa0482190 | Msa1462070 | -0.812323 | 4.492261e-51 | -8.615850e-47 |
| Msa0982270 | Msa1462070 | 0.826293 | 2.937431e-54 | -8.615850e-47 |
| Msa0990580 | Msa1462070 | 0.802894 | 4.517119e-49 | -8.615850e-47 |
| Msa0994370 | Msa1462070 | 0.825009 | 5.921982e-54 | -8.615850e-47 |
| Msa0999100 | Msa1462070 | 0.812847 | 3.450049e-51 | -8.615850e-47 |
| Msa1000880 | Msa1462070 | 0.806457 | 8.148543e-50 | -8.615850e-47 |
| Msa1001390 | Msa1462070 | 0.810443 | 1.149716e-50 | -8.615850e-47 |
| Msa1014540 | Msa1462070 | 0.810989 | 8.762313e-51 | -8.615850e-47 |
| Msa1029080 | Msa1462070 | -0.813560 | 2.406816e-51 | -8.615850e-47 |
| Msa1034300 | Msa1462070 | 0.800741 | 1.249996e-48 | -8.615850e-47 |
| Msa1036610 | Msa1462070 | 0.819683 | 1.021055e-52 | -8.615850e-47 |
| Msa1039880 | Msa1462070 | 0.806321 | 8.705128e-50 | -8.615850e-47 |
| Msa1063510 | Msa1462070 | 0.811099 | 8.292849e-51 | -8.615850e-47 |
| Msa1075220 | Msa1462070 | -0.815829 | 7.564901e-52 | -8.615850e-47 |
| Msa1082500 | Msa1462070 | 0.820030 | 8.508562e-53 | -8.615850e-47 |
| Msa1084260 | Msa1462070 | 0.800369 | 1.488681e-48 | -8.615850e-47 |
| Msa1105190 | Msa1462070 | 0.803356 | 3.625886e-49 | -8.615850e-47 |
| Msa0249560 | Msa1462070 | 0.822989 | 1.763032e-53 | -8.615850e-47 |
| Msa0251640 | Msa1462070 | 0.806387 | 8.433487e-50 | -8.615850e-47 |
| Msa0253340 | Msa1462070 | 0.827096 | 1.889006e-54 | -8.615850e-47 |
| Msa0261720 | Msa1462070 | 0.806652 | 7.411849e-50 | -8.615850e-47 |
| Msa0265150 | Msa1462070 | 0.802654 | 5.062940e-49 | -8.615850e-47 |
| Msa0278110 | Msa1462070 | 0.807880 | 4.072746e-50 | -8.615850e-47 |
| Msa0279210 | Msa1462070 | -0.800921 | 1.148544e-48 | -8.615850e-47 |
| Msa0286670 | Msa1462070 | 0.806424 | 8.282141e-50 | -8.615850e-47 |
| Msa0288100 | Msa1462070 | 0.822178 | 2.722137e-53 | -8.615850e-47 |
| Msa0290760 | Msa1462070 | 0.814495 | 1.496662e-51 | -8.615850e-47 |
| Msa0292170 | Msa1462070 | 0.828859 | 7.113962e-55 | -8.615850e-47 |
| Msa0303150 | Msa1462070 | 0.802216 | 6.232860e-49 | -8.615850e-47 |
| Msa0306210 | Msa1462070 | -0.845704 | 3.439625e-59 | -8.615850e-47 |
| Msa0319170 | Msa1462070 | 0.814103 | 1.827208e-51 | -8.615850e-47 |
| Msa0326110 | Msa1462070 | 0.801195 | 1.009517e-48 | -8.615850e-47 |
| Msa0326520 | Msa1462070 | 0.831387 | 1.717888e-55 | -8.615850e-47 |
| Msa0336320 | Msa1462070 | 0.818257 | 2.154467e-52 | -8.615850e-47 |
| Msa0337590 | Msa1462070 | 0.801476 | 8.844241e-49 | -8.615850e-47 |
| Msa0339620 | Msa1462070 | 0.806198 | 9.242659e-50 | -8.615850e-47 |
| Msa0340450 | Msa1462070 | 0.809631 | 1.719862e-50 | -8.615850e-47 |
| Msa0344690 | Msa1462070 | -0.836595 | 8.533345e-57 | -8.615850e-47 |
| Msa1111870 | Msa1462070 | 0.821005 | 5.080088e-53 | -8.615850e-47 |
| Msa1114030 | Msa1462070 | 0.811157 | 8.055766e-51 | -8.615850e-47 |
| Msa1121450 | Msa1462070 | -0.806769 | 7.001782e-50 | -8.615850e-47 |
| Msa1124540 | Msa1462070 | -0.855188 | 7.457853e-62 | -8.615850e-47 |
| Msa1137570 | Msa1462070 | 0.803550 | 3.303935e-49 | -8.615850e-47 |
| Msa1144720 | Msa1462070 | -0.839582 | 1.453936e-57 | -8.615850e-47 |
| Msa1154280 | Msa1462070 | 0.800086 | 1.699480e-48 | -8.615850e-47 |
| Msa1156170 | Msa1462070 | -0.815260 | 1.012682e-51 | -8.615850e-47 |
| Msa1162550 | Msa1462070 | -0.805963 | 1.035740e-49 | -8.615850e-47 |
| Msa1178110 | Msa1462070 | 0.801170 | 1.021474e-48 | -8.615850e-47 |
| Msa1183100 | Msa1462070 | -0.845703 | 3.442418e-59 | -8.615850e-47 |
| Msa1202770 | Msa1462070 | -0.822279 | 2.579473e-53 | -8.615850e-47 |
| Msa1204630 | Msa1462070 | 0.803821 | 2.903550e-49 | -8.615850e-47 |
| Msa0484780 | Msa1462070 | 0.824364 | 8.403606e-54 | -8.615850e-47 |
| Msa0485490 | Msa1462070 | 0.812359 | 4.410851e-51 | -8.615850e-47 |
| Msa0485500 | Msa1462070 | -0.805516 | 1.285586e-49 | -8.615850e-47 |
| Msa0512870 | Msa1462070 | 0.806076 | 9.806440e-50 | -8.615850e-47 |
| Msa0512900 | Msa1462070 | 0.801184 | 1.014806e-48 | -8.615850e-47 |
| Msa0518380 | Msa1462070 | 0.818688 | 1.720144e-52 | -8.615850e-47 |
| Msa0521740 | Msa1462070 | 0.811378 | 7.212471e-51 | -8.615850e-47 |
| Msa0523940 | Msa1462070 | 0.809253 | 2.072748e-50 | -8.615850e-47 |
| Msa0524600 | Msa1462070 | 0.803263 | 3.788701e-49 | -8.615850e-47 |
| Msa0538600 | Msa1462070 | 0.806932 | 6.468900e-50 | -8.615850e-47 |
| Msa0571780 | Msa1462070 | 0.823122 | 1.641918e-53 | -8.615850e-47 |
| Msa0575470 | Msa1462070 | 0.804905 | 1.725576e-49 | -8.615850e-47 |
| Msa0579130 | Msa1462070 | 0.806064 | 9.862711e-50 | -8.615850e-47 |
| Msa0585230 | Msa1462070 | 0.820633 | 6.187993e-53 | -8.615850e-47 |
| Msa0587190 | Msa1462070 | 0.808667 | 2.767048e-50 | -8.615850e-47 |
| Msa0598160 | Msa1462070 | 0.804147 | 2.483959e-49 | -8.615850e-47 |
| Msa0599890 | Msa1462070 | 0.806164 | 9.394773e-50 | -8.615850e-47 |
| Msa0844320 | Msa1462070 | 0.811423 | 7.054892e-51 | -8.615850e-47 |
| Msa0844490 | Msa1462070 | 0.824321 | 8.597766e-54 | -8.615850e-47 |
| Msa0857640 | Msa1462070 | 0.810459 | 1.140567e-50 | -8.615850e-47 |
| Msa0861090 | Msa1462070 | 0.800656 | 1.300935e-48 | -8.615850e-47 |
| Msa0861130 | Msa1462070 | 0.840116 | 1.055166e-57 | -8.615850e-47 |
| Msa0864470 | Msa1462070 | -0.834434 | 3.004238e-56 | -8.615850e-47 |
| Msa0866410 | Msa1462070 | 0.805809 | 1.115569e-49 | -8.615850e-47 |
| Msa0876580 | Msa1462070 | 0.835449 | 1.666840e-56 | -8.615850e-47 |
| Msa0876850 | Msa1462070 | -0.816433 | 5.544267e-52 | -8.615850e-47 |
| Msa0879600 | Msa1462070 | 0.816277 | 6.007861e-52 | -8.615850e-47 |
| Msa0890550 | Msa1462070 | 0.807415 | 5.111455e-50 | -8.615850e-47 |
| Msa0894720 | Msa1462070 | 0.829539 | 4.865570e-55 | -8.615850e-47 |
| Msa0905160 | Msa1462070 | 0.823621 | 1.255218e-53 | -8.615850e-47 |
| Msa0921420 | Msa1462070 | 0.801293 | 9.640826e-49 | -8.615850e-47 |
| Msa0922410 | Msa1462070 | 0.811574 | 6.540311e-51 | -8.615850e-47 |
| Msa0927380 | Msa1462070 | 0.802538 | 5.350207e-49 | -8.615850e-47 |
| Msa0931520 | Msa1462070 | 0.815843 | 7.509593e-52 | -8.615850e-47 |
| Msa0933100 | Msa1462070 | 0.821637 | 3.631135e-53 | -8.615850e-47 |
| Msa0937150 | Msa1462070 | 0.851795 | 7.030503e-61 | -8.615850e-47 |
| Msa0942080 | Msa1462070 | -0.801823 | 7.507841e-49 | -8.615850e-47 |
| Msa0942550 | Msa1462070 | -0.832547 | 8.880237e-56 | -8.615850e-47 |
| Msa0942560 | Msa1462070 | -0.836206 | 1.072180e-56 | -8.615850e-47 |
| Msa0946690 | Msa1462070 | -0.822498 | 2.294224e-53 | -8.615850e-47 |
| Msa0962840 | Msa1462070 | 0.831606 | 1.517336e-55 | -8.615850e-47 |
| Msa0968680 | Msa1462070 | 0.800202 | 1.609918e-48 | -8.615850e-47 |
| Msa0973100 | Msa1462070 | 0.800703 | 1.272765e-48 | -8.615850e-47 |
| Msa0976670 | Msa1462070 | 0.801431 | 9.032943e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462070 | MtrunA17_Chr1g0192171 | 98.214 | 168 | 3 | 0 | 1 | 168 | 1 | 168 | 1.77e-120 | 337 |
| Msa1462070 | MtrunA17_Chr1g0192201 | 97.619 | 168 | 4 | 0 | 1 | 168 | 1 | 168 | 2.16e-119 | 334 |
| Msa1462070 | MtrunA17_Chr2g0295871 | 85.119 | 168 | 24 | 1 | 1 | 168 | 1 | 167 | 5.07e-102 | 290 |
| Msa1462070 | MtrunA17_Chr6g0479151 | 80.745 | 161 | 30 | 1 | 1 | 161 | 1 | 160 | 1.34e-89 | 258 |
| Msa1462070 | MtrunA17_Chr1g0192161 | 85.271 | 129 | 19 | 0 | 19 | 147 | 9 | 137 | 2.15e-64 | 194 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462070 | AT3G16640.1 | 77.976 | 168 | 37 | 0 | 1 | 168 | 1 | 168 | 1.03e-95 | 274 |
| Msa1462070 | AT3G05540.1 | 79.290 | 169 | 33 | 2 | 1 | 168 | 1 | 168 | 7.99e-89 | 257 |
Find 46 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATAGTACTCTGGTAATTT+TGG | 0.116227 | tig0041894:-12290 | Msa1462070:three_prime_UTR |
| TTGACATTGTTGACACTTTC+AGG | 0.139441 | tig0041894:-12743 | Msa1462070:CDS |
| GAGTTTACTATTCTCTAATT+AGG | 0.257485 | tig0041894:-12242 | Msa1462070:three_prime_UTR |
| AATTGTAGGTCTTTGAGTTT+TGG | 0.259902 | tig0041894:+12579 | None:intergenic |
| TGTTGACACTTTCAGGCTTC+AGG | 0.327729 | tig0041894:-12736 | Msa1462070:CDS |
| ACACATTTAGTTATCATGTT+AGG | 0.332046 | tig0041894:-12340 | Msa1462070:three_prime_UTR |
| CGCAACCATGCTTGTTTACC+AGG | 0.349778 | tig0041894:-13818 | Msa1462070:exon |
| GATGAAATACATACAATTGT+AGG | 0.374980 | tig0041894:+12565 | None:intergenic |
| CTACTTTGCCTATGGCTTGA+AGG | 0.378916 | tig0041894:-12377 | Msa1462070:CDS |
| GTTTACCAGGATCTTCTTAC+GGG | 0.390880 | tig0041894:-13805 | Msa1462070:intron |
| TGTTTACCAGGATCTTCTTA+CGG | 0.395300 | tig0041894:-13806 | Msa1462070:CDS |
| CCATTCTGAATTTCCTTGTA+GGG | 0.421805 | tig0041894:+13014 | None:intergenic |
| TCCATTCTGAATTTCCTTGT+AGG | 0.427172 | tig0041894:+13013 | None:intergenic |
| AATTGCTTCTTATCAAAAGC+TGG | 0.428621 | tig0041894:+12708 | None:intergenic |
| GAATGGAATGTTGTGGGAAG+TGG | 0.443613 | tig0041894:-12997 | Msa1462070:CDS |
| CCTTGTGTTTGCTTACTACA+AGG | 0.455642 | tig0041894:-12425 | Msa1462070:CDS |
| TAGGCAAAGTAGAGAAAAGT+TGG | 0.474181 | tig0041894:+12388 | None:intergenic |
| TATTTGCAGTGGGTTGTTCA+AGG | 0.483236 | tig0041894:-12852 | Msa1462070:intron |
| CTCTGACTCATTCCCCTACA+AGG | 0.486361 | tig0041894:-13027 | Msa1462070:CDS |
| GGAGCAGTGGATGTGAATAT+TGG | 0.501116 | tig0041894:-12831 | Msa1462070:CDS |
| AATAAGAGAGAAGCAAAAGA+AGG | 0.503108 | tig0041894:+13853 | None:intergenic |
| GGTGCTAACCCTTCTGCTGA+GGG | 0.509671 | tig0041894:-12810 | Msa1462070:CDS |
| CTTGATTTCCTTCAAGCCAT+AGG | 0.517168 | tig0041894:+12369 | None:intergenic |
| TTTACTATTCTCTAATTAGG+AGG | 0.521787 | tig0041894:-12239 | Msa1462070:three_prime_UTR |
| ATTCTTAATCGATAGTACTC+TGG | 0.532748 | tig0041894:-12299 | Msa1462070:three_prime_UTR |
| AATTCAGAATGGAATGTTGT+GGG | 0.534489 | tig0041894:-13003 | Msa1462070:CDS |
| TCGTCACCACCCTCAGCAGA+AGG | 0.538139 | tig0041894:+12801 | None:intergenic |
| GTGTTTGCTTACTACAAGGA+TGG | 0.538874 | tig0041894:-12421 | Msa1462070:CDS |
| CCCTACAAGGAAATTCAGAA+TGG | 0.541188 | tig0041894:-13014 | Msa1462070:CDS |
| CATTCTGAATTTCCTTGTAG+GGG | 0.549656 | tig0041894:+13015 | None:intergenic |
| TGGTGCTAACCCTTCTGCTG+AGG | 0.553542 | tig0041894:-12811 | Msa1462070:CDS |
| GTTTACCCGTAAGAAGATCC+TGG | 0.562606 | tig0041894:+13800 | None:intergenic |
| GGGGAGAGTATGCATGATGA+TGG | 0.563213 | tig0041894:-12451 | Msa1462070:CDS |
| AAATTCAGAATGGAATGTTG+TGG | 0.574500 | tig0041894:-13004 | Msa1462070:CDS |
| GTTGTGGGAAGTGGAAGGAA+AGG | 0.585239 | tig0041894:-12988 | Msa1462070:intron |
| TTCTGCTGAGGGTGGTGACG+AGG | 0.592413 | tig0041894:-12799 | Msa1462070:CDS |
| CTGGTAAACAAGCATGGTTG+CGG | 0.598178 | tig0041894:+13819 | None:intergenic |
| AAGATCCTGGTAAACAAGCA+TGG | 0.602746 | tig0041894:+13813 | None:intergenic |
| GTAGAGAAAAGTTGGATCAG+TGG | 0.605758 | tig0041894:+12396 | None:intergenic |
| GCTAACCCTTCTGCTGAGGG+TGG | 0.615863 | tig0041894:-12807 | Msa1462070:CDS |
| CGTCACCACCCTCAGCAGAA+GGG | 0.628440 | tig0041894:+12802 | None:intergenic |
| CCTTGTAGTAAGCAAACACA+AGG | 0.635355 | tig0041894:+12425 | None:intergenic |
| GTGGGTTGTTCAAGGAGCAG+TGG | 0.636439 | tig0041894:-12844 | Msa1462070:CDS |
| GAGGGTGGTGACGAGGATGA+CGG | 0.661706 | tig0041894:-12792 | Msa1462070:CDS |
| GGAATGTTGTGGGAAGTGGA+AGG | 0.687071 | tig0041894:-12993 | Msa1462070:CDS |
| ATATTGTTCTCAGAGCAACA+TGG | 0.711223 | tig0041894:-12194 | Msa1462070:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTTAATAGAATTTGT+TGG | - | tig0041894:12728-12747 | Msa1462070:CDS | 10.0% |
| !! | TTTATTTATGATCATATATT+TGG | + | tig0041894:13147-13166 | None:intergenic | 10.0% |
| !!! | TTTAATTTAATAGAATTTGT+TGG | - | tig0041894:12728-12747 | Msa1462070:CDS | 10.0% |
| !! | TTTATTTATGATCATATATT+TGG | + | tig0041894:13147-13166 | None:intergenic | 10.0% |
| !!! | TTATATATTAACCTTTTGTA+AGG | - | tig0041894:12514-12533 | Msa1462070:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGACACA+AGG | - | tig0041894:12566-12585 | Msa1462070:intron | 15.0% |
| !! | AAAACAAAAATTCATTCAAA+TGG | - | tig0041894:12945-12964 | Msa1462070:intron | 15.0% |
| !!! | TTATATATTAACCTTTTGTA+AGG | - | tig0041894:12514-12533 | Msa1462070:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGACACA+AGG | - | tig0041894:12566-12585 | Msa1462070:intron | 15.0% |
| !! | AAAACAAAAATTCATTCAAA+TGG | - | tig0041894:12945-12964 | Msa1462070:intron | 15.0% |
| !! | AAAGTAAAAGAAACCTAATT+GGG | + | tig0041894:12308-12327 | None:intergenic | 20.0% |
| !! | AAAAGTAAAAGAAACCTAAT+TGG | + | tig0041894:12309-12328 | None:intergenic | 20.0% |
| !! | TTATCATTCATCGTAATATT+TGG | + | tig0041894:12387-12406 | None:intergenic | 20.0% |
| !!! | TTTTTCATAAACTTCACTTT+TGG | - | tig0041894:12462-12481 | Msa1462070:intron | 20.0% |
| !!! | ACAAGGTTAAAATACTTTTT+TGG | - | tig0041894:12583-12602 | Msa1462070:CDS | 20.0% |
| !! | GATAATAATGAAAAACCTAA+AGG | + | tig0041894:12702-12721 | None:intergenic | 20.0% |
| !! | TAATCTTAAATATTAGTAGC+AGG | + | tig0041894:12895-12914 | None:intergenic | 20.0% |
| !!! | ATTATCTTTCATCTCTTTTT+TGG | - | tig0041894:13506-13525 | Msa1462070:intron | 20.0% |
| !!! | ATTAAGTTTTCTCTTTTTTG+TGG | - | tig0041894:13533-13552 | Msa1462070:intron | 20.0% |
| !! | AAAGTAAAAGAAACCTAATT+GGG | + | tig0041894:12308-12327 | None:intergenic | 20.0% |
| !! | AAAAGTAAAAGAAACCTAAT+TGG | + | tig0041894:12309-12328 | None:intergenic | 20.0% |
| !! | TTATCATTCATCGTAATATT+TGG | + | tig0041894:12387-12406 | None:intergenic | 20.0% |
| !!! | TTTTTCATAAACTTCACTTT+TGG | - | tig0041894:12462-12481 | Msa1462070:intron | 20.0% |
| !!! | ACAAGGTTAAAATACTTTTT+TGG | - | tig0041894:12583-12602 | Msa1462070:CDS | 20.0% |
| !! | GATAATAATGAAAAACCTAA+AGG | + | tig0041894:12702-12721 | None:intergenic | 20.0% |
| !! | TAATCTTAAATATTAGTAGC+AGG | + | tig0041894:12895-12914 | None:intergenic | 20.0% |
| !!! | ATTATCTTTCATCTCTTTTT+TGG | - | tig0041894:13506-13525 | Msa1462070:intron | 20.0% |
| !!! | ATTAAGTTTTCTCTTTTTTG+TGG | - | tig0041894:13533-13552 | Msa1462070:intron | 20.0% |
| !!! | TTTTCTCCATTGTTTTTCAT+AGG | - | tig0041894:12325-12344 | Msa1462070:three_prime_UTR | 25.0% |
| ! | CAAAATCCTATGAAAAACAA+TGG | + | tig0041894:12334-12353 | None:intergenic | 25.0% |
| ! | AAATTCATTCACTAAACACA+GGG | + | tig0041894:12419-12438 | None:intergenic | 25.0% |
| ! | AATCTTAACAACCTTACAAA+AGG | + | tig0041894:12528-12547 | None:intergenic | 25.0% |
| ! | TTGGAAAACCTTAAATTTCT+TGG | - | tig0041894:12602-12621 | Msa1462070:CDS | 25.0% |
| ! | TGGAAAACCTTAAATTTCTT+GGG | - | tig0041894:12603-12622 | Msa1462070:CDS | 25.0% |
| ! | ACTATTATAGATCAAACTTG+TGG | - | tig0041894:12637-12656 | Msa1462070:CDS | 25.0% |
| ! | AAATATTACTTAGCAGTTTG+TGG | + | tig0041894:12806-12825 | None:intergenic | 25.0% |
| ! | AAAATCCACAATCAAGTATT+AGG | + | tig0041894:12855-12874 | None:intergenic | 25.0% |
| ! | GATGAAATACATACAATTGT+AGG | + | tig0041894:13486-13505 | None:intergenic | 25.0% |
| ! | ACACATTTAGTTATCATGTT+AGG | - | tig0041894:13708-13727 | Msa1462070:intron | 25.0% |
| ! | GAGTTTACTATTCTCTAATT+AGG | - | tig0041894:13806-13825 | Msa1462070:CDS | 25.0% |
| ! | TTTACTATTCTCTAATTAGG+AGG | - | tig0041894:13809-13828 | Msa1462070:CDS | 25.0% |
| !!! | TTTTCTCCATTGTTTTTCAT+AGG | - | tig0041894:12325-12344 | Msa1462070:three_prime_UTR | 25.0% |
| ! | CAAAATCCTATGAAAAACAA+TGG | + | tig0041894:12334-12353 | None:intergenic | 25.0% |
| ! | AAATTCATTCACTAAACACA+GGG | + | tig0041894:12419-12438 | None:intergenic | 25.0% |
| ! | AATCTTAACAACCTTACAAA+AGG | + | tig0041894:12528-12547 | None:intergenic | 25.0% |
| ! | TTGGAAAACCTTAAATTTCT+TGG | - | tig0041894:12602-12621 | Msa1462070:CDS | 25.0% |
| ! | TGGAAAACCTTAAATTTCTT+GGG | - | tig0041894:12603-12622 | Msa1462070:CDS | 25.0% |
| ! | ACTATTATAGATCAAACTTG+TGG | - | tig0041894:12637-12656 | Msa1462070:CDS | 25.0% |
| ! | AAATATTACTTAGCAGTTTG+TGG | + | tig0041894:12806-12825 | None:intergenic | 25.0% |
| ! | AAAATCCACAATCAAGTATT+AGG | + | tig0041894:12855-12874 | None:intergenic | 25.0% |
| ! | GATGAAATACATACAATTGT+AGG | + | tig0041894:13486-13505 | None:intergenic | 25.0% |
| ! | ACACATTTAGTTATCATGTT+AGG | - | tig0041894:13708-13727 | Msa1462070:intron | 25.0% |
| ! | GAGTTTACTATTCTCTAATT+AGG | - | tig0041894:13806-13825 | Msa1462070:CDS | 25.0% |
| ! | TTTACTATTCTCTAATTAGG+AGG | - | tig0041894:13809-13828 | Msa1462070:CDS | 25.0% |
| AATAAGAGAGAAGCAAAAGA+AGG | + | tig0041894:12198-12217 | None:intergenic | 30.0% | |
| ACAAAAAACTCAAAGATGCA+AGG | + | tig0041894:12273-12292 | None:intergenic | 30.0% | |
| ! | TTTTACTTTACCACCCAATT+AGG | - | tig0041894:12292-12311 | Msa1462070:three_prime_UTR | 30.0% |
| GAAATTCATTCACTAAACAC+AGG | + | tig0041894:12420-12439 | None:intergenic | 30.0% | |
| GATCTATAATAGTGTGTGTT+TGG | + | tig0041894:12630-12649 | None:intergenic | 30.0% | |
| !! | AGTTTTATGTTTGTGTTCTG+TGG | - | tig0041894:12671-12690 | Msa1462070:CDS | 30.0% |
| ! | CTTTGTTGATGAATTTGTCT+AGG | - | tig0041894:12986-13005 | Msa1462070:intron | 30.0% |
| AAATTCAGAATGGAATGTTG+TGG | - | tig0041894:13044-13063 | Msa1462070:intron | 30.0% | |
| AATTCAGAATGGAATGTTGT+GGG | - | tig0041894:13045-13064 | Msa1462070:intron | 30.0% | |
| CACATCACACAATAAACTTT+AGG | + | tig0041894:13174-13193 | None:intergenic | 30.0% | |
| AATTGCTTCTTATCAAAAGC+TGG | + | tig0041894:13343-13362 | None:intergenic | 30.0% | |
| !! | ATTGTAGGTCTTTGAGTTTT+GGG | + | tig0041894:13471-13490 | None:intergenic | 30.0% |
| !! | AATTGTAGGTCTTTGAGTTT+TGG | + | tig0041894:13472-13491 | None:intergenic | 30.0% |
| !!! | ATCAATGTTGCAGTTTTGTT+GGG | - | tig0041894:13577-13596 | Msa1462070:intron | 30.0% |
| ATTCTTAATCGATAGTACTC+TGG | - | tig0041894:13749-13768 | Msa1462070:intron | 30.0% | |
| AATAAGAGAGAAGCAAAAGA+AGG | + | tig0041894:12198-12217 | None:intergenic | 30.0% | |
| ACAAAAAACTCAAAGATGCA+AGG | + | tig0041894:12273-12292 | None:intergenic | 30.0% | |
| ! | TTTTACTTTACCACCCAATT+AGG | - | tig0041894:12292-12311 | Msa1462070:three_prime_UTR | 30.0% |
| GAAATTCATTCACTAAACAC+AGG | + | tig0041894:12420-12439 | None:intergenic | 30.0% | |
| GATCTATAATAGTGTGTGTT+TGG | + | tig0041894:12630-12649 | None:intergenic | 30.0% | |
| !! | AGTTTTATGTTTGTGTTCTG+TGG | - | tig0041894:12671-12690 | Msa1462070:CDS | 30.0% |
| ! | CTTTGTTGATGAATTTGTCT+AGG | - | tig0041894:12986-13005 | Msa1462070:intron | 30.0% |
| AAATTCAGAATGGAATGTTG+TGG | - | tig0041894:13044-13063 | Msa1462070:intron | 30.0% | |
| AATTCAGAATGGAATGTTGT+GGG | - | tig0041894:13045-13064 | Msa1462070:intron | 30.0% | |
| CACATCACACAATAAACTTT+AGG | + | tig0041894:13174-13193 | None:intergenic | 30.0% | |
| AATTGCTTCTTATCAAAAGC+TGG | + | tig0041894:13343-13362 | None:intergenic | 30.0% | |
| !! | ATTGTAGGTCTTTGAGTTTT+GGG | + | tig0041894:13471-13490 | None:intergenic | 30.0% |
| !! | AATTGTAGGTCTTTGAGTTT+TGG | + | tig0041894:13472-13491 | None:intergenic | 30.0% |
| !!! | ATCAATGTTGCAGTTTTGTT+GGG | - | tig0041894:13577-13596 | Msa1462070:intron | 30.0% |
| ATTCTTAATCGATAGTACTC+TGG | - | tig0041894:13749-13768 | Msa1462070:intron | 30.0% | |
| TGTTTACCAGGATCTTCTTA+CGG | - | tig0041894:12242-12261 | Msa1462070:three_prime_UTR | 35.0% | |
| GTAAAAGAAACCTAATTGGG+TGG | + | tig0041894:12305-12324 | None:intergenic | 35.0% | |
| GTTTGGTCCCAAGAAATTTA+AGG | + | tig0041894:12613-12632 | None:intergenic | 35.0% | |
| TGTTCTGTGGTTTAACCTTT+AGG | - | tig0041894:12684-12703 | Msa1462070:CDS | 35.0% | |
| GTTAGGCTAATCGTGTTTAA+GGG | + | tig0041894:12833-12852 | None:intergenic | 35.0% | |
| CCACAATCAAGTATTAGGTT+AGG | + | tig0041894:12850-12869 | None:intergenic | 35.0% | |
| CCTAACCTAATACTTGATTG+TGG | - | tig0041894:12847-12866 | Msa1462070:intron | 35.0% | |
| CATTCTGAATTTCCTTGTAG+GGG | + | tig0041894:13036-13055 | None:intergenic | 35.0% | |
| CCATTCTGAATTTCCTTGTA+GGG | + | tig0041894:13037-13056 | None:intergenic | 35.0% | |
| TCCATTCTGAATTTCCTTGT+AGG | + | tig0041894:13038-13057 | None:intergenic | 35.0% | |
| TGTGATGTGATTATTTGCAG+TGG | - | tig0041894:13185-13204 | Msa1462070:intron | 35.0% | |
| GTGATGTGATTATTTGCAGT+GGG | - | tig0041894:13186-13205 | Msa1462070:intron | 35.0% | |
| TTGACATTGTTGACACTTTC+AGG | - | tig0041894:13305-13324 | Msa1462070:intron | 35.0% | |
| !! | TTGAACAACTCTTGCTTTTC+TGG | + | tig0041894:13415-13434 | None:intergenic | 35.0% |
| !! | CATCAATGTTGCAGTTTTGT+TGG | - | tig0041894:13576-13595 | Msa1462070:intron | 35.0% |
| !!! | TCAATGTTGCAGTTTTGTTG+GGG | - | tig0041894:13578-13597 | Msa1462070:intron | 35.0% |
| TAGGCAAAGTAGAGAAAAGT+TGG | + | tig0041894:13663-13682 | None:intergenic | 35.0% | |
| ! | ACTTTTCTCTACTTTGCCTA+TGG | - | tig0041894:13663-13682 | Msa1462070:intron | 35.0% |
| ! | CGATAGTACTCTGGTAATTT+TGG | - | tig0041894:13758-13777 | Msa1462070:intron | 35.0% |
| ATATTGTTCTCAGAGCAACA+TGG | - | tig0041894:13854-13873 | Msa1462070:five_prime_UTR | 35.0% | |
| AAGGAGAAAGAGTTAACTAG+CGG | + | tig0041894:12179-12198 | None:intergenic | 35.0% | |
| TGTTTACCAGGATCTTCTTA+CGG | - | tig0041894:12242-12261 | Msa1462070:three_prime_UTR | 35.0% | |
| GTAAAAGAAACCTAATTGGG+TGG | + | tig0041894:12305-12324 | None:intergenic | 35.0% | |
| GTTTGGTCCCAAGAAATTTA+AGG | + | tig0041894:12613-12632 | None:intergenic | 35.0% | |
| TGTTCTGTGGTTTAACCTTT+AGG | - | tig0041894:12684-12703 | Msa1462070:CDS | 35.0% | |
| GTTAGGCTAATCGTGTTTAA+GGG | + | tig0041894:12833-12852 | None:intergenic | 35.0% | |
| CCACAATCAAGTATTAGGTT+AGG | + | tig0041894:12850-12869 | None:intergenic | 35.0% | |
| CCTAACCTAATACTTGATTG+TGG | - | tig0041894:12847-12866 | Msa1462070:intron | 35.0% | |
| CATTCTGAATTTCCTTGTAG+GGG | + | tig0041894:13036-13055 | None:intergenic | 35.0% | |
| CCATTCTGAATTTCCTTGTA+GGG | + | tig0041894:13037-13056 | None:intergenic | 35.0% | |
| TCCATTCTGAATTTCCTTGT+AGG | + | tig0041894:13038-13057 | None:intergenic | 35.0% | |
| TGTGATGTGATTATTTGCAG+TGG | - | tig0041894:13185-13204 | Msa1462070:intron | 35.0% | |
| GTGATGTGATTATTTGCAGT+GGG | - | tig0041894:13186-13205 | Msa1462070:intron | 35.0% | |
| TTGACATTGTTGACACTTTC+AGG | - | tig0041894:13305-13324 | Msa1462070:intron | 35.0% | |
| !! | TTGAACAACTCTTGCTTTTC+TGG | + | tig0041894:13415-13434 | None:intergenic | 35.0% |
| !! | CATCAATGTTGCAGTTTTGT+TGG | - | tig0041894:13576-13595 | Msa1462070:intron | 35.0% |
| !!! | TCAATGTTGCAGTTTTGTTG+GGG | - | tig0041894:13578-13597 | Msa1462070:intron | 35.0% |
| TAGGCAAAGTAGAGAAAAGT+TGG | + | tig0041894:13663-13682 | None:intergenic | 35.0% | |
| ! | ACTTTTCTCTACTTTGCCTA+TGG | - | tig0041894:13663-13682 | Msa1462070:intron | 35.0% |
| ! | CGATAGTACTCTGGTAATTT+TGG | - | tig0041894:13758-13777 | Msa1462070:intron | 35.0% |
| ATATTGTTCTCAGAGCAACA+TGG | - | tig0041894:13854-13873 | Msa1462070:five_prime_UTR | 35.0% | |
| AAGATCCTGGTAAACAAGCA+TGG | + | tig0041894:12238-12257 | None:intergenic | 40.0% | |
| GTTTACCAGGATCTTCTTAC+GGG | - | tig0041894:12243-12262 | Msa1462070:three_prime_UTR | 40.0% | |
| AGTTGTTGTGTTTGTGACAG+AGG | - | tig0041894:12762-12781 | Msa1462070:CDS | 40.0% | |
| GGTTAGGCTAATCGTGTTTA+AGG | + | tig0041894:12834-12853 | None:intergenic | 40.0% | |
| CCCTACAAGGAAATTCAGAA+TGG | - | tig0041894:13034-13053 | Msa1462070:CDS | 40.0% | |
| !! | TATTTGCAGTGGGTTGTTCA+AGG | - | tig0041894:13196-13215 | Msa1462070:intron | 40.0% |
| CCTTGTAGTAAGCAAACACA+AGG | + | tig0041894:13626-13645 | None:intergenic | 40.0% | |
| CCTTGTGTTTGCTTACTACA+AGG | - | tig0041894:13623-13642 | Msa1462070:intron | 40.0% | |
| GTGTTTGCTTACTACAAGGA+TGG | - | tig0041894:13627-13646 | Msa1462070:intron | 40.0% | |
| GTAGAGAAAAGTTGGATCAG+TGG | + | tig0041894:13655-13674 | None:intergenic | 40.0% | |
| CTTGATTTCCTTCAAGCCAT+AGG | + | tig0041894:13682-13701 | None:intergenic | 40.0% | |
| AAGATCCTGGTAAACAAGCA+TGG | + | tig0041894:12238-12257 | None:intergenic | 40.0% | |
| GTTTACCAGGATCTTCTTAC+GGG | - | tig0041894:12243-12262 | Msa1462070:three_prime_UTR | 40.0% | |
| AGTTGTTGTGTTTGTGACAG+AGG | - | tig0041894:12762-12781 | Msa1462070:CDS | 40.0% | |
| GGTTAGGCTAATCGTGTTTA+AGG | + | tig0041894:12834-12853 | None:intergenic | 40.0% | |
| CCCTACAAGGAAATTCAGAA+TGG | - | tig0041894:13034-13053 | Msa1462070:CDS | 40.0% | |
| !! | TATTTGCAGTGGGTTGTTCA+AGG | - | tig0041894:13196-13215 | Msa1462070:intron | 40.0% |
| CCTTGTAGTAAGCAAACACA+AGG | + | tig0041894:13626-13645 | None:intergenic | 40.0% | |
| CCTTGTGTTTGCTTACTACA+AGG | - | tig0041894:13623-13642 | Msa1462070:intron | 40.0% | |
| GTGTTTGCTTACTACAAGGA+TGG | - | tig0041894:13627-13646 | Msa1462070:intron | 40.0% | |
| GTAGAGAAAAGTTGGATCAG+TGG | + | tig0041894:13655-13674 | None:intergenic | 40.0% | |
| CTTGATTTCCTTCAAGCCAT+AGG | + | tig0041894:13682-13701 | None:intergenic | 40.0% | |
| CTGGTAAACAAGCATGGTTG+CGG | + | tig0041894:12232-12251 | None:intergenic | 45.0% | |
| GTTTACCCGTAAGAAGATCC+TGG | + | tig0041894:12251-12270 | None:intergenic | 45.0% | |
| GAATGGAATGTTGTGGGAAG+TGG | - | tig0041894:13051-13070 | Msa1462070:intron | 45.0% | |
| GGAGCAGTGGATGTGAATAT+TGG | - | tig0041894:13217-13236 | Msa1462070:intron | 45.0% | |
| TGTTGACACTTTCAGGCTTC+AGG | - | tig0041894:13312-13331 | Msa1462070:intron | 45.0% | |
| !!! | GGTCTTTGAGTTTTGGGAGA+AGG | + | tig0041894:13465-13484 | None:intergenic | 45.0% |
| CTACTTTGCCTATGGCTTGA+AGG | - | tig0041894:13671-13690 | Msa1462070:intron | 45.0% | |
| CTGGTAAACAAGCATGGTTG+CGG | + | tig0041894:12232-12251 | None:intergenic | 45.0% | |
| GTTTACCCGTAAGAAGATCC+TGG | + | tig0041894:12251-12270 | None:intergenic | 45.0% | |
| GAATGGAATGTTGTGGGAAG+TGG | - | tig0041894:13051-13070 | Msa1462070:intron | 45.0% | |
| GGAGCAGTGGATGTGAATAT+TGG | - | tig0041894:13217-13236 | Msa1462070:intron | 45.0% | |
| TGTTGACACTTTCAGGCTTC+AGG | - | tig0041894:13312-13331 | Msa1462070:intron | 45.0% | |
| !!! | GGTCTTTGAGTTTTGGGAGA+AGG | + | tig0041894:13465-13484 | None:intergenic | 45.0% |
| CTACTTTGCCTATGGCTTGA+AGG | - | tig0041894:13671-13690 | Msa1462070:intron | 45.0% | |
| !!! | ATTCTATTAAATTAAAATTT+TGG | + | tig0041894:12724-12743 | None:intergenic | 5.0% |
| !!! | ATTCTATTAAATTAAAATTT+TGG | + | tig0041894:12724-12743 | None:intergenic | 5.0% |
| CGCAACCATGCTTGTTTACC+AGG | - | tig0041894:12230-12249 | Msa1462070:three_prime_UTR | 50.0% | |
| CTCTGACTCATTCCCCTACA+AGG | - | tig0041894:13021-13040 | Msa1462070:CDS | 50.0% | |
| GGAATGTTGTGGGAAGTGGA+AGG | - | tig0041894:13055-13074 | Msa1462070:intron | 50.0% | |
| GTTGTGGGAAGTGGAAGGAA+AGG | - | tig0041894:13060-13079 | Msa1462070:intron | 50.0% | |
| GGGAAGTGGAAGGAAAGGTT+AGG | - | tig0041894:13065-13084 | Msa1462070:intron | 50.0% | |
| ! | GGGGAGAGTATGCATGATGA+TGG | - | tig0041894:13597-13616 | Msa1462070:intron | 50.0% |
| CGCAACCATGCTTGTTTACC+AGG | - | tig0041894:12230-12249 | Msa1462070:three_prime_UTR | 50.0% | |
| CTCTGACTCATTCCCCTACA+AGG | - | tig0041894:13021-13040 | Msa1462070:CDS | 50.0% | |
| GGAATGTTGTGGGAAGTGGA+AGG | - | tig0041894:13055-13074 | Msa1462070:intron | 50.0% | |
| GTTGTGGGAAGTGGAAGGAA+AGG | - | tig0041894:13060-13079 | Msa1462070:intron | 50.0% | |
| GGGAAGTGGAAGGAAAGGTT+AGG | - | tig0041894:13065-13084 | Msa1462070:intron | 50.0% | |
| ! | GGGGAGAGTATGCATGATGA+TGG | - | tig0041894:13597-13616 | Msa1462070:intron | 50.0% |
| ! | GTGGGTTGTTCAAGGAGCAG+TGG | - | tig0041894:13204-13223 | Msa1462070:intron | 55.0% |
| ! | TGGTGCTAACCCTTCTGCTG+AGG | - | tig0041894:13237-13256 | Msa1462070:intron | 55.0% |
| GGTGCTAACCCTTCTGCTGA+GGG | - | tig0041894:13238-13257 | Msa1462070:intron | 55.0% | |
| ! | GTGGGTTGTTCAAGGAGCAG+TGG | - | tig0041894:13204-13223 | Msa1462070:intron | 55.0% |
| ! | TGGTGCTAACCCTTCTGCTG+AGG | - | tig0041894:13237-13256 | Msa1462070:intron | 55.0% |
| GGTGCTAACCCTTCTGCTGA+GGG | - | tig0041894:13238-13257 | Msa1462070:intron | 55.0% | |
| GCTAACCCTTCTGCTGAGGG+TGG | - | tig0041894:13241-13260 | Msa1462070:intron | 60.0% | |
| CGTCACCACCCTCAGCAGAA+GGG | + | tig0041894:13249-13268 | None:intergenic | 60.0% | |
| TCGTCACCACCCTCAGCAGA+AGG | + | tig0041894:13250-13269 | None:intergenic | 60.0% | |
| ! | TTCTGCTGAGGGTGGTGACG+AGG | - | tig0041894:13249-13268 | Msa1462070:intron | 60.0% |
| ! | GAGGGTGGTGACGAGGATGA+CGG | - | tig0041894:13256-13275 | Msa1462070:intron | 60.0% |
| GCTAACCCTTCTGCTGAGGG+TGG | - | tig0041894:13241-13260 | Msa1462070:intron | 60.0% | |
| CGTCACCACCCTCAGCAGAA+GGG | + | tig0041894:13249-13268 | None:intergenic | 60.0% | |
| TCGTCACCACCCTCAGCAGA+AGG | + | tig0041894:13250-13269 | None:intergenic | 60.0% | |
| ! | TTCTGCTGAGGGTGGTGACG+AGG | - | tig0041894:13249-13268 | Msa1462070:intron | 60.0% |
| ! | GAGGGTGGTGACGAGGATGA+CGG | - | tig0041894:13256-13275 | Msa1462070:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0041894 | gene | 12177 | 13893 | 12177 | ID=Msa1462070;Name=Msa1462070 |
| tig0041894 | mRNA | 12177 | 13893 | 12177 | ID=Msa1462070-mRNA-1;Parent=Msa1462070;Name=Msa1462070-mRNA-1;_AED=0.30;_eAED=0.30;_QI=60|1|1|1|1|1|4|186|168 |
| tig0041894 | exon | 12177 | 12480 | 12177 | ID=Msa1462070-mRNA-1:exon:23487;Parent=Msa1462070-mRNA-1 |
| tig0041894 | exon | 12579 | 12865 | 12579 | ID=Msa1462070-mRNA-1:exon:23486;Parent=Msa1462070-mRNA-1 |
| tig0041894 | exon | 12989 | 13062 | 12989 | ID=Msa1462070-mRNA-1:exon:23485;Parent=Msa1462070-mRNA-1 |
| tig0041894 | exon | 13806 | 13893 | 13806 | ID=Msa1462070-mRNA-1:exon:23484;Parent=Msa1462070-mRNA-1 |
| tig0041894 | five_prime_UTR | 13834 | 13893 | 13834 | ID=Msa1462070-mRNA-1:five_prime_utr;Parent=Msa1462070-mRNA-1 |
| tig0041894 | CDS | 13806 | 13833 | 13806 | ID=Msa1462070-mRNA-1:cds;Parent=Msa1462070-mRNA-1 |
| tig0041894 | CDS | 12989 | 13062 | 12989 | ID=Msa1462070-mRNA-1:cds;Parent=Msa1462070-mRNA-1 |
| tig0041894 | CDS | 12579 | 12865 | 12579 | ID=Msa1462070-mRNA-1:cds;Parent=Msa1462070-mRNA-1 |
| tig0041894 | CDS | 12363 | 12480 | 12363 | ID=Msa1462070-mRNA-1:cds;Parent=Msa1462070-mRNA-1 |
| tig0041894 | three_prime_UTR | 12177 | 12362 | 12177 | ID=Msa1462070-mRNA-1:three_prime_utr;Parent=Msa1462070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
