Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444380 | XP_003598676.1 | 97.895 | 190 | 4 | 0 | 1 | 190 | 1 | 190 | 1.44e-132 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444380 | sp|Q9LK88|NQR_ARATH | 71.658 | 187 | 52 | 1 | 4 | 189 | 10 | 196 | 3.93e-92 | 270 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444380 | G7IW38 | 97.895 | 190 | 4 | 0 | 1 | 190 | 1 | 190 | 6.90e-133 | 379 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000800 | Msa0444380 | 0.808540 | 2.944957e-50 | -8.615850e-47 |
| Msa0006080 | Msa0444380 | 0.804890 | 1.738774e-49 | -8.615850e-47 |
| Msa0011010 | Msa0444380 | 0.825734 | 3.988849e-54 | -8.615850e-47 |
| Msa0011040 | Msa0444380 | 0.823424 | 1.395827e-53 | -8.615850e-47 |
| Msa0013270 | Msa0444380 | 0.849696 | 2.740187e-60 | -8.615850e-47 |
| Msa0017710 | Msa0444380 | 0.808018 | 3.805697e-50 | -8.615850e-47 |
| Msa0024650 | Msa0444380 | 0.808631 | 2.817373e-50 | -8.615850e-47 |
| Msa0025570 | Msa0444380 | 0.837742 | 4.344392e-57 | -8.615850e-47 |
| Msa0037180 | Msa0444380 | 0.820140 | 8.028632e-53 | -8.615850e-47 |
| Msa0045810 | Msa0444380 | 0.838205 | 3.301811e-57 | -8.615850e-47 |
| Msa0046200 | Msa0444380 | 0.811564 | 6.571618e-51 | -8.615850e-47 |
| Msa0048380 | Msa0444380 | 0.823545 | 1.307690e-53 | -8.615850e-47 |
| Msa0062190 | Msa0444380 | 0.820891 | 5.396652e-53 | -8.615850e-47 |
| Msa0063540 | Msa0444380 | 0.831978 | 1.228654e-55 | -8.615850e-47 |
| Msa0072180 | Msa0444380 | 0.800852 | 1.186317e-48 | -8.615850e-47 |
| Msa0073110 | Msa0444380 | 0.849173 | 3.832780e-60 | -8.615850e-47 |
| Msa0092220 | Msa0444380 | 0.825473 | 4.598623e-54 | -8.615850e-47 |
| Msa0101530 | Msa0444380 | 0.813889 | 2.036229e-51 | -8.615850e-47 |
| Msa0105590 | Msa0444380 | -0.801191 | 1.011618e-48 | -8.615850e-47 |
| Msa0106540 | Msa0444380 | 0.844433 | 7.581280e-59 | -8.615850e-47 |
| Msa0111780 | Msa0444380 | 0.802042 | 6.769449e-49 | -8.615850e-47 |
| Msa0120450 | Msa0444380 | 0.812500 | 4.109733e-51 | -8.615850e-47 |
| Msa0121320 | Msa0444380 | 0.840393 | 8.935447e-58 | -8.615850e-47 |
| Msa0136180 | Msa0444380 | -0.800545 | 1.370614e-48 | -8.615850e-47 |
| Msa0139500 | Msa0444380 | 0.826934 | 2.065363e-54 | -8.615850e-47 |
| Msa0141410 | Msa0444380 | 0.802769 | 4.794615e-49 | -8.615850e-47 |
| Msa0163690 | Msa0444380 | 0.800226 | 1.591887e-48 | -8.615850e-47 |
| Msa0166180 | Msa0444380 | 0.832282 | 1.033054e-55 | -8.615850e-47 |
| Msa0177320 | Msa0444380 | 0.805051 | 1.608499e-49 | -8.615850e-47 |
| Msa0180210 | Msa0444380 | 0.804760 | 1.850192e-49 | -8.615850e-47 |
| Msa0189150 | Msa0444380 | -0.808806 | 2.583914e-50 | -8.615850e-47 |
| Msa0211460 | Msa0444380 | 0.808308 | 3.301207e-50 | -8.615850e-47 |
| Msa0225070 | Msa0444380 | -0.806421 | 8.293899e-50 | -8.615850e-47 |
| Msa0234150 | Msa0444380 | 0.804470 | 2.127716e-49 | -8.615850e-47 |
| Msa0236690 | Msa0444380 | -0.807561 | 4.760814e-50 | -8.615850e-47 |
| Msa0238110 | Msa0444380 | 0.805935 | 1.049794e-49 | -8.615850e-47 |
| Msa0238140 | Msa0444380 | 0.808267 | 3.367935e-50 | -8.615850e-47 |
| Msa0364910 | Msa0444380 | -0.830850 | 2.327756e-55 | -8.615850e-47 |
| Msa0374470 | Msa0444380 | 0.825445 | 4.668793e-54 | -8.615850e-47 |
| Msa0374560 | Msa0444380 | 0.819420 | 1.172578e-52 | -8.615850e-47 |
| Msa0374600 | Msa0444380 | 0.823841 | 1.114439e-53 | -8.615850e-47 |
| Msa0375860 | Msa0444380 | 0.827856 | 1.241397e-54 | -8.615850e-47 |
| Msa0386880 | Msa0444380 | 0.808914 | 2.450665e-50 | -8.615850e-47 |
| Msa0386910 | Msa0444380 | 0.821987 | 3.014868e-53 | -8.615850e-47 |
| Msa0396870 | Msa0444380 | 0.811329 | 7.392485e-51 | -8.615850e-47 |
| Msa0403740 | Msa0444380 | -0.827835 | 1.256377e-54 | -8.615850e-47 |
| Msa0405200 | Msa0444380 | 0.813977 | 1.947992e-51 | -8.615850e-47 |
| Msa0412580 | Msa0444380 | -0.819928 | 8.975741e-53 | -8.615850e-47 |
| Msa0441750 | Msa0444380 | 0.824051 | 9.950651e-54 | -8.615850e-47 |
| Msa0444380 | Msa0454770 | 0.815930 | 7.183444e-52 | -8.615850e-47 |
| Msa0444380 | Msa0456450 | -0.821327 | 4.282215e-53 | -8.615850e-47 |
| Msa0444380 | Msa0457070 | -0.829161 | 6.009943e-55 | -8.615850e-47 |
| Msa0444380 | Msa0470420 | 0.811582 | 6.513585e-51 | -8.615850e-47 |
| Msa0444380 | Msa0471390 | 0.813220 | 2.857247e-51 | -8.615850e-47 |
| Msa0444380 | Msa0481670 | 0.805254 | 1.458793e-49 | -8.615850e-47 |
| Msa0444380 | Msa0491780 | 0.804956 | 1.684099e-49 | -8.615850e-47 |
| Msa0444380 | Msa0497680 | 0.801921 | 7.166808e-49 | -8.615850e-47 |
| Msa0444380 | Msa0501080 | 0.816861 | 4.446503e-52 | -8.615850e-47 |
| Msa0444380 | Msa0523720 | 0.818248 | 2.163904e-52 | -8.615850e-47 |
| Msa0444380 | Msa0525180 | -0.800573 | 1.352676e-48 | -8.615850e-47 |
| Msa0444380 | Msa0531050 | 0.820932 | 5.280270e-53 | -8.615850e-47 |
| Msa0444380 | Msa0538050 | -0.803536 | 3.326431e-49 | -8.615850e-47 |
| Msa0444380 | Msa0540640 | 0.805323 | 1.411138e-49 | -8.615850e-47 |
| Msa0444380 | Msa0557250 | 0.819447 | 1.156056e-52 | -8.615850e-47 |
| Msa0444380 | Msa0561830 | 0.818254 | 2.158025e-52 | -8.615850e-47 |
| Msa0444380 | Msa0565700 | 0.833608 | 4.837270e-56 | -8.615850e-47 |
| Msa0444380 | Msa0567330 | 0.842688 | 2.220139e-58 | -8.615850e-47 |
| Msa0444380 | Msa0567570 | 0.828094 | 1.088400e-54 | -8.615850e-47 |
| Msa0444380 | Msa0576320 | 0.838419 | 2.908330e-57 | -8.615850e-47 |
| Msa0444380 | Msa0583270 | -0.802169 | 6.373312e-49 | -8.615850e-47 |
| Msa0444380 | Msa0583390 | 0.803217 | 3.872627e-49 | -8.615850e-47 |
| Msa0444380 | Msa0603310 | 0.820459 | 6.784580e-53 | -8.615850e-47 |
| Msa0444380 | Msa0604220 | 0.805690 | 1.181683e-49 | -8.615850e-47 |
| Msa0444380 | Msa0606600 | 0.816711 | 4.802775e-52 | -8.615850e-47 |
| Msa0444380 | Msa0606820 | 0.802888 | 4.529550e-49 | -8.615850e-47 |
| Msa0444380 | Msa0610190 | 0.807462 | 4.995902e-50 | -8.615850e-47 |
| Msa0444380 | Msa0614960 | 0.810110 | 1.356360e-50 | -8.615850e-47 |
| Msa0444380 | Msa0615070 | 0.801787 | 7.634224e-49 | -8.615850e-47 |
| Msa0444380 | Msa0615780 | 0.803749 | 3.005336e-49 | -8.615850e-47 |
| Msa0444380 | Msa0618680 | 0.810352 | 1.203176e-50 | -8.615850e-47 |
| Msa0444380 | Msa0618700 | 0.818854 | 1.577128e-52 | -8.615850e-47 |
| Msa0444380 | Msa0628200 | 0.802366 | 5.804278e-49 | -8.615850e-47 |
| Msa0444380 | Msa0647300 | 0.817880 | 2.621492e-52 | -8.615850e-47 |
| Msa0444380 | Msa0655370 | 0.825630 | 4.222038e-54 | -8.615850e-47 |
| Msa0444380 | Msa0658120 | 0.803329 | 3.672097e-49 | -8.615850e-47 |
| Msa0444380 | Msa0676570 | -0.808312 | 3.295064e-50 | -8.615850e-47 |
| Msa0444380 | Msa0680460 | 0.808198 | 3.483637e-50 | -8.615850e-47 |
| Msa0444380 | Msa0682110 | 0.821618 | 3.669544e-53 | -8.615850e-47 |
| Msa0444380 | Msa0682160 | 0.839523 | 1.505680e-57 | -8.615850e-47 |
| Msa0444380 | Msa0686830 | 0.820761 | 5.782572e-53 | -8.615850e-47 |
| Msa0444380 | Msa0699170 | 0.828034 | 1.124772e-54 | -8.615850e-47 |
| Msa0444380 | Msa0699800 | 0.802153 | 6.422426e-49 | -8.615850e-47 |
| Msa0444380 | Msa0701660 | 0.803794 | 2.940226e-49 | -8.615850e-47 |
| Msa0444380 | Msa0707330 | 0.825684 | 4.097693e-54 | -8.615850e-47 |
| Msa0444380 | Msa0715040 | 0.817914 | 2.575701e-52 | -8.615850e-47 |
| Msa0444380 | Msa0721930 | 0.811145 | 8.105331e-51 | -8.615850e-47 |
| Msa0444380 | Msa0727230 | 0.815543 | 8.759246e-52 | -8.615850e-47 |
| Msa0444380 | Msa0733560 | 0.827298 | 1.689716e-54 | -8.615850e-47 |
| Msa0444380 | Msa0738680 | 0.809056 | 2.284478e-50 | -8.615850e-47 |
| Msa0444380 | Msa0757120 | 0.821731 | 3.455358e-53 | -8.615850e-47 |
| Msa0444380 | Msa0762930 | 0.810920 | 9.068743e-51 | -8.615850e-47 |
| Msa0444380 | Msa0773960 | 0.809843 | 1.548253e-50 | -8.615850e-47 |
| Msa0444380 | Msa0792410 | 0.808808 | 2.581416e-50 | -8.615850e-47 |
| Msa0444380 | Msa0795460 | 0.800469 | 1.420609e-48 | -8.615850e-47 |
| Msa0444380 | Msa0804170 | 0.819946 | 8.893135e-53 | -8.615850e-47 |
| Msa0444380 | Msa0817690 | 0.804686 | 1.917776e-49 | -8.615850e-47 |
| Msa0444380 | Msa0819150 | 0.812666 | 3.780006e-51 | -8.615850e-47 |
| Msa0444380 | Msa0829990 | 0.801161 | 1.025997e-48 | -8.615850e-47 |
| Msa0444380 | Msa0838210 | 0.800404 | 1.464200e-48 | -8.615850e-47 |
| Msa0444380 | Msa0854160 | 0.810012 | 1.424157e-50 | -8.615850e-47 |
| Msa0444380 | Msa0873880 | 0.804791 | 1.823093e-49 | -8.615850e-47 |
| Msa0444380 | Msa0873940 | 0.806196 | 9.249670e-50 | -8.615850e-47 |
| Msa0444380 | Msa0880910 | 0.836779 | 7.660023e-57 | -8.615850e-47 |
| Msa0444380 | Msa0903020 | 0.827165 | 1.818677e-54 | -8.615850e-47 |
| Msa0444380 | Msa0910170 | 0.808156 | 3.556575e-50 | -8.615850e-47 |
| Msa0444380 | Msa0921390 | 0.804358 | 2.244717e-49 | -8.615850e-47 |
| Msa0444380 | Msa0921790 | 0.811912 | 5.521486e-51 | -8.615850e-47 |
| Msa0444380 | Msa0931680 | 0.816332 | 5.840662e-52 | -8.615850e-47 |
| Msa0444380 | Msa0936630 | 0.803207 | 3.892068e-49 | -8.615850e-47 |
| Msa0444380 | Msa0964400 | -0.811077 | 8.386388e-51 | -8.615850e-47 |
| Msa0444380 | Msa0967780 | 0.842628 | 2.302948e-58 | -8.615850e-47 |
| Msa0444380 | Msa0968990 | 0.808443 | 3.090043e-50 | -8.615850e-47 |
| Msa0444380 | Msa0970270 | 0.826172 | 3.138380e-54 | -8.615850e-47 |
| Msa0444380 | Msa0975950 | 0.808264 | 3.372837e-50 | -8.615850e-47 |
| Msa0444380 | Msa1001120 | 0.808541 | 2.944643e-50 | -8.615850e-47 |
| Msa0444380 | Msa1002820 | 0.826176 | 3.131370e-54 | -8.615850e-47 |
| Msa0444380 | Msa1029820 | 0.806745 | 7.084759e-50 | -8.615850e-47 |
| Msa0444380 | Msa1029840 | 0.819605 | 1.063650e-52 | -8.615850e-47 |
| Msa0444380 | Msa1029850 | 0.815416 | 9.350185e-52 | -8.615850e-47 |
| Msa0444380 | Msa1029860 | 0.840679 | 7.519652e-58 | -8.615850e-47 |
| Msa0444380 | Msa1035050 | 0.811433 | 7.020139e-51 | -8.615850e-47 |
| Msa0444380 | Msa1041250 | 0.808665 | 2.770334e-50 | -8.615850e-47 |
| Msa0444380 | Msa1041910 | 0.804398 | 2.202497e-49 | -8.615850e-47 |
| Msa0444380 | Msa1056890 | 0.806024 | 1.005659e-49 | -8.615850e-47 |
| Msa0444380 | Msa1066150 | 0.819998 | 8.650993e-53 | -8.615850e-47 |
| Msa0444380 | Msa1068730 | 0.817848 | 2.665604e-52 | -8.615850e-47 |
| Msa0444380 | Msa1068780 | 0.806456 | 8.154741e-50 | -8.615850e-47 |
| Msa0444380 | Msa1068940 | 0.807716 | 4.412864e-50 | -8.615850e-47 |
| Msa0444380 | Msa1068950 | 0.806538 | 7.834377e-50 | -8.615850e-47 |
| Msa0444380 | Msa1070630 | -0.815824 | 7.583568e-52 | -8.615850e-47 |
| Msa0444380 | Msa1075090 | 0.822958 | 1.792357e-53 | -8.615850e-47 |
| Msa0444380 | Msa1078760 | -0.802943 | 4.413320e-49 | -8.615850e-47 |
| Msa0444380 | Msa1093190 | -0.810893 | 9.190730e-51 | -8.615850e-47 |
| Msa0444380 | Msa1103450 | 0.834915 | 2.273834e-56 | -8.615850e-47 |
| Msa0444380 | Msa1108560 | 0.831929 | 1.263194e-55 | -8.615850e-47 |
| Msa0444380 | Msa1115980 | 0.812584 | 3.939252e-51 | -8.615850e-47 |
| Msa0444380 | Msa1120960 | 0.813180 | 2.916317e-51 | -8.615850e-47 |
| Msa0444380 | Msa1131120 | 0.802250 | 6.133621e-49 | -8.615850e-47 |
| Msa0444380 | Msa1136630 | 0.815161 | 1.065282e-51 | -8.615850e-47 |
| Msa0444380 | Msa1147010 | 0.855301 | 6.917383e-62 | -8.615850e-47 |
| Msa0444380 | Msa1156720 | 0.803700 | 3.076328e-49 | -8.615850e-47 |
| Msa0444380 | Msa1156730 | 0.822277 | 2.581356e-53 | -8.615850e-47 |
| Msa0444380 | Msa1156740 | 0.812392 | 4.338125e-51 | -8.615850e-47 |
| Msa0444380 | Msa1157210 | 0.804693 | 1.910720e-49 | -8.615850e-47 |
| Msa0444380 | Msa1158450 | -0.805164 | 1.523771e-49 | -8.615850e-47 |
| Msa0444380 | Msa1165460 | 0.824368 | 8.385613e-54 | -8.615850e-47 |
| Msa0444380 | Msa1167960 | 0.806584 | 7.663318e-50 | -8.615850e-47 |
| Msa0444380 | Msa1174280 | 0.837544 | 4.881872e-57 | -8.615850e-47 |
| Msa0444380 | Msa1177650 | 0.800257 | 1.568595e-48 | -8.615850e-47 |
| Msa0444380 | Msa1179340 | 0.803830 | 2.890340e-49 | -8.615850e-47 |
| Msa0444380 | Msa1181090 | 0.820890 | 5.400707e-53 | -8.615850e-47 |
| Msa0444380 | Msa1184680 | 0.833757 | 4.439905e-56 | -8.615850e-47 |
| Msa0444380 | Msa1185270 | 0.801676 | 8.048183e-49 | -8.615850e-47 |
| Msa0444380 | Msa1186260 | 0.801208 | 1.003538e-48 | -8.615850e-47 |
| Msa0444380 | Msa1191530 | -0.812959 | 3.260001e-51 | -8.615850e-47 |
| Msa0444380 | Msa1199540 | -0.809473 | 1.859854e-50 | -8.615850e-47 |
| Msa0444380 | Msa1205270 | -0.809401 | 1.927308e-50 | -8.615850e-47 |
| Msa0444380 | Msa1205360 | 0.803759 | 2.990436e-49 | -8.615850e-47 |
| Msa0444380 | Msa1223540 | 0.808673 | 2.759674e-50 | -8.615850e-47 |
| Msa0444380 | Msa1223960 | 0.813195 | 2.894150e-51 | -8.615850e-47 |
| Msa0444380 | Msa1223990 | 0.836286 | 1.022816e-56 | -8.615850e-47 |
| Msa0444380 | Msa1225890 | 0.803018 | 4.259336e-49 | -8.615850e-47 |
| Msa0444380 | Msa1239210 | 0.805048 | 1.610754e-49 | -8.615850e-47 |
| Msa0444380 | Msa1250280 | 0.807896 | 4.040551e-50 | -8.615850e-47 |
| Msa0444380 | Msa1254870 | 0.800105 | 1.684795e-48 | -8.615850e-47 |
| Msa0444380 | Msa1262650 | 0.805179 | 1.512663e-49 | -8.615850e-47 |
| Msa0444380 | Msa1263110 | 0.856068 | 4.128755e-62 | -8.615850e-47 |
| Msa0444380 | Msa1263120 | 0.824934 | 6.167327e-54 | -8.615850e-47 |
| Msa0444380 | Msa1266120 | -0.812845 | 3.454279e-51 | -8.615850e-47 |
| Msa0444380 | Msa1273320 | 0.813998 | 1.927196e-51 | -8.615850e-47 |
| Msa0444380 | Msa1279200 | -0.806639 | 7.458889e-50 | -8.615850e-47 |
| Msa0444380 | Msa1281780 | 0.818013 | 2.446292e-52 | -8.615850e-47 |
| Msa0444380 | Msa1284020 | 0.815745 | 7.897820e-52 | -8.615850e-47 |
| Msa0444380 | Msa1286860 | -0.804304 | 2.303062e-49 | -8.615850e-47 |
| Msa0444380 | Msa1291070 | -0.801186 | 1.013845e-48 | -8.615850e-47 |
| Msa0444380 | Msa1297220 | -0.807734 | 4.374048e-50 | -8.615850e-47 |
| Msa0444380 | Msa1298090 | 0.802956 | 4.386854e-49 | -8.615850e-47 |
| Msa0444380 | Msa1311370 | 0.800696 | 1.276852e-48 | -8.615850e-47 |
| Msa0444380 | Msa1317740 | 0.820736 | 5.859275e-53 | -8.615850e-47 |
| Msa0444380 | Msa1321010 | 0.815190 | 1.049496e-51 | -8.615850e-47 |
| Msa0444380 | Msa1322500 | 0.812077 | 5.083116e-51 | -8.615850e-47 |
| Msa0444380 | Msa1323260 | -0.807017 | 6.207766e-50 | -8.615850e-47 |
| Msa0444380 | Msa1342360 | -0.821685 | 3.539705e-53 | -8.615850e-47 |
| Msa0444380 | Msa1361980 | 0.852259 | 5.191466e-61 | -8.615850e-47 |
| Msa0444380 | Msa1368420 | 0.820315 | 7.318036e-53 | -8.615850e-47 |
| Msa0444380 | Msa1383220 | 0.823170 | 1.600095e-53 | -8.615850e-47 |
| Msa0444380 | Msa1384700 | 0.804157 | 2.471618e-49 | -8.615850e-47 |
| Msa0444380 | Msa1384990 | 0.802678 | 5.005351e-49 | -8.615850e-47 |
| Msa0444380 | Msa1388720 | -0.800023 | 1.750670e-48 | -8.615850e-47 |
| Msa0444380 | Msa1405830 | 0.842428 | 2.601135e-58 | -8.615850e-47 |
| Msa0444380 | Msa1407810 | 0.836251 | 1.043914e-56 | -8.615850e-47 |
| Msa0444380 | Msa1408280 | -0.800713 | 1.266518e-48 | -8.615850e-47 |
| Msa0444380 | Msa1413020 | 0.814798 | 1.282552e-51 | -8.615850e-47 |
| Msa0444380 | Msa1413150 | 0.821083 | 4.875968e-53 | -8.615850e-47 |
| Msa0444380 | Msa1419320 | 0.808768 | 2.633596e-50 | -8.615850e-47 |
| Msa0444380 | Msa1429470 | 0.820087 | 8.256340e-53 | -8.615850e-47 |
| Msa0444380 | Msa1433360 | 0.825556 | 4.395430e-54 | -8.615850e-47 |
| Msa0444380 | Msa1437780 | 0.836968 | 6.854295e-57 | -8.615850e-47 |
| Msa0444380 | Msa1455360 | 0.834123 | 3.595579e-56 | -8.615850e-47 |
| Msa0444380 | Msa1462610 | 0.805855 | 1.091016e-49 | -8.615850e-47 |
| Msa0444380 | Msa1462780 | 0.800439 | 1.440668e-48 | -8.615850e-47 |
| Msa0241750 | Msa0444380 | 0.800971 | 1.122170e-48 | -8.615850e-47 |
| Msa0242720 | Msa0444380 | 0.818966 | 1.487594e-52 | -8.615850e-47 |
| Msa0248320 | Msa0444380 | 0.804662 | 1.940171e-49 | -8.615850e-47 |
| Msa0265650 | Msa0444380 | 0.825012 | 5.911460e-54 | -8.615850e-47 |
| Msa0266140 | Msa0444380 | -0.813772 | 2.161433e-51 | -8.615850e-47 |
| Msa0267450 | Msa0444380 | -0.814458 | 1.524649e-51 | -8.615850e-47 |
| Msa0267510 | Msa0444380 | -0.818937 | 1.510274e-52 | -8.615850e-47 |
| Msa0270730 | Msa0444380 | -0.817131 | 3.866369e-52 | -8.615850e-47 |
| Msa0279000 | Msa0444380 | 0.801521 | 8.656818e-49 | -8.615850e-47 |
| Msa0279810 | Msa0444380 | 0.824063 | 9.889866e-54 | -8.615850e-47 |
| Msa0287480 | Msa0444380 | 0.817097 | 3.935220e-52 | -8.615850e-47 |
| Msa0290800 | Msa0444380 | 0.839101 | 1.937937e-57 | -8.615850e-47 |
| Msa0303900 | Msa0444380 | 0.804739 | 1.869125e-49 | -8.615850e-47 |
| Msa0304060 | Msa0444380 | -0.811050 | 8.498270e-51 | -8.615850e-47 |
| Msa0307630 | Msa0444380 | 0.810248 | 1.266541e-50 | -8.615850e-47 |
| Msa0318490 | Msa0444380 | 0.819041 | 1.430457e-52 | -8.615850e-47 |
| Msa0319220 | Msa0444380 | 0.826206 | 3.080406e-54 | -8.615850e-47 |
| Msa0328870 | Msa0444380 | 0.838146 | 3.420101e-57 | -8.615850e-47 |
| Msa0331070 | Msa0444380 | -0.806224 | 9.127175e-50 | -8.615850e-47 |
| Msa0333770 | Msa0444380 | 0.835300 | 1.818794e-56 | -8.615850e-47 |
| Msa0334320 | Msa0444380 | 0.805152 | 1.532120e-49 | -8.615850e-47 |
| Msa0354600 | Msa0444380 | 0.826454 | 2.689138e-54 | -8.615850e-47 |
| Msa0356270 | Msa0444380 | 0.811428 | 7.036196e-51 | -8.615850e-47 |
| Msa0364030 | Msa0444380 | -0.828987 | 6.622506e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444380 | MtrunA17_Chr3g0084201 | 97.895 | 190 | 4 | 0 | 1 | 190 | 1 | 190 | 1.33e-136 | 379 |
| Msa0444380 | MtrunA17_Chr3g0084221 | 83.770 | 191 | 30 | 1 | 1 | 190 | 1 | 191 | 5.25e-115 | 325 |
| Msa0444380 | MtrunA17_Chr3g0084161 | 72.775 | 191 | 51 | 1 | 1 | 190 | 1 | 191 | 3.22e-102 | 292 |
| Msa0444380 | MtrunA17_Chr8g0353131 | 71.958 | 189 | 52 | 1 | 3 | 190 | 4 | 192 | 5.22e-101 | 289 |
| Msa0444380 | MtrunA17_Chr3g0084191 | 68.229 | 192 | 57 | 1 | 1 | 188 | 1 | 192 | 5.76e-91 | 274 |
| Msa0444380 | MtrunA17_Chr3g0082411 | 60.317 | 63 | 20 | 1 | 49 | 106 | 1 | 63 | 7.35e-20 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444380 | AT3G27890.1 | 71.658 | 187 | 52 | 1 | 4 | 189 | 10 | 196 | 4.00e-93 | 270 |
Find 42 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAAGGTTGCTGCACTTTC+TGG | 0.101546 | 3_3:-17306235 | Msa0444380:CDS |
| GAAAATAATTATTCTGTTTC+AGG | 0.128909 | 3_3:-17305884 | Msa0444380:intron |
| TATTTCAAATTAAACACTTA+TGG | 0.236060 | 3_3:+17304365 | None:intergenic |
| CAATTTCACTCCATTCCTTT+TGG | 0.249822 | 3_3:-17304331 | Msa0444380:three_prime_UTR |
| AATTGCCAACAACCTATTCT+TGG | 0.304308 | 3_3:+17304448 | None:intergenic |
| CGAAAGGATTCAACTTCAAT+TGG | 0.311303 | 3_3:+17305950 | None:intergenic |
| CAACATGGCTGGGATAATTA+AGG | 0.328930 | 3_3:-17306251 | Msa0444380:exon |
| CATCAAGATCACCAAATGTT+TGG | 0.330789 | 3_3:-17304655 | Msa0444380:CDS |
| GGTTTACCAGCCCAAACATT+TGG | 0.362348 | 3_3:+17304644 | None:intergenic |
| CAATTGAAGTTGAATCCTTT+CGG | 0.366586 | 3_3:-17305949 | Msa0444380:CDS |
| CAGTCAAGTGCATTCTTTAG+TGG | 0.388337 | 3_3:+17304680 | None:intergenic |
| ATCAAGATCACCAAATGTTT+GGG | 0.414288 | 3_3:-17304654 | Msa0444380:CDS |
| TTGCAGAGTAAATGCCTTCA+AGG | 0.434046 | 3_3:+17304418 | None:intergenic |
| GCATTTACTCTGCAACTTCA+AGG | 0.438426 | 3_3:-17304410 | Msa0444380:CDS |
| CACTAAAGAATGCACTTGAC+TGG | 0.447734 | 3_3:-17304679 | Msa0444380:CDS |
| TGATTCACAAACAACATGGC+TGG | 0.461512 | 3_3:-17306262 | Msa0444380:exon |
| GTACTTGTTCTTTATTTACA+TGG | 0.475159 | 3_3:-17304253 | Msa0444380:three_prime_UTR |
| TTTCTATATGAAATTCCAAA+AGG | 0.490343 | 3_3:+17304316 | None:intergenic |
| CAATATCATCTCCGACAAAT+CGG | 0.490712 | 3_3:-17304575 | Msa0444380:CDS |
| AACACTGATCTTGAGAAAGA+AGG | 0.494409 | 3_3:-17305980 | Msa0444380:CDS |
| AACACTGGTCTCATCCGTTC+TGG | 0.496937 | 3_3:-17306190 | Msa0444380:intron |
| CGAGGAAAACTCCGATTTGT+CGG | 0.523747 | 3_3:+17304564 | None:intergenic |
| AGATGCCAAGAATAGGTTGT+TGG | 0.525362 | 3_3:-17304453 | Msa0444380:CDS |
| ACACTGATCTTGAGAAAGAA+GGG | 0.529151 | 3_3:-17305979 | Msa0444380:CDS |
| CTAGCACTCACTATTGCCGC+AGG | 0.543014 | 3_3:+17304623 | None:intergenic |
| AGATCACCAAATGTTTGGGC+TGG | 0.543332 | 3_3:-17304650 | Msa0444380:CDS |
| CCAGCAAAATTTAACAGTGA+TGG | 0.543372 | 3_3:-17304491 | Msa0444380:CDS |
| TCGATGAAGATGCCAAGAAT+AGG | 0.548839 | 3_3:-17304460 | Msa0444380:CDS |
| GATTCACAAACAACATGGCT+GGG | 0.554176 | 3_3:-17306261 | Msa0444380:exon |
| ATATGAAATTCCAAAAGGAA+TGG | 0.558543 | 3_3:+17304321 | None:intergenic |
| ACTAAAGAATGCACTTGACT+GGG | 0.582016 | 3_3:-17304678 | Msa0444380:CDS |
| TCAAGATCAGTGTTCAACAT+TGG | 0.585501 | 3_3:+17305989 | None:intergenic |
| CGAAAAGCTTCTTACAACAC+TGG | 0.614227 | 3_3:-17306205 | Msa0444380:CDS |
| GCGGCAATAGTGAGTGCTAG+AGG | 0.623112 | 3_3:-17304620 | Msa0444380:CDS |
| GTGAGTGCTAGAGGAGGACA+TGG | 0.634706 | 3_3:-17304611 | Msa0444380:CDS |
| GAAGTAGGAACCTACCAGAA+CGG | 0.655408 | 3_3:+17306176 | None:intergenic |
| TATTGATGAAATGAAGATCG+AGG | 0.655609 | 3_3:+17304546 | None:intergenic |
| ACATTGATTCACAAACAACA+TGG | 0.658949 | 3_3:-17306266 | Msa0444380:exon |
| TGTTTGGGCTGGTAAACCTG+CGG | 0.686432 | 3_3:-17304639 | Msa0444380:CDS |
| GCAATAGTGAGTGCTAGAGG+AGG | 0.704435 | 3_3:-17304617 | Msa0444380:CDS |
| AGTGCTAGAGGAGGACATGG+TGG | 0.727531 | 3_3:-17304608 | Msa0444380:CDS |
| ATGTTGTTTGTGAATCAATG+TGG | 0.730864 | 3_3:+17306268 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAGGATAAATATAAA+AGG | + | chr3_3:17304749-17304768 | None:intergenic | 10.0% |
| !!! | TATCCTTTTTTTTTTTTTTT+AGG | - | chr3_3:17304757-17304776 | Msa0444380:intron | 10.0% |
| !!! | ATCCTTTTTTTTTTTTTTTA+GGG | - | chr3_3:17304758-17304777 | Msa0444380:intron | 10.0% |
| !! | AAAAAAAGGATAAATATAAA+AGG | + | chr3_3:17304749-17304768 | None:intergenic | 10.0% |
| !!! | TATCCTTTTTTTTTTTTTTT+AGG | - | chr3_3:17304757-17304776 | Msa0444380:intron | 10.0% |
| !!! | ATCCTTTTTTTTTTTTTTTA+GGG | - | chr3_3:17304758-17304777 | Msa0444380:intron | 10.0% |
| !!! | AATAAAAAAAAAAGTGTTTG+TGG | + | chr3_3:17304367-17304386 | None:intergenic | 15.0% |
| !!! | TGATACATAATTTTTTTTTG+AGG | - | chr3_3:17304397-17304416 | Msa0444380:exon | 15.0% |
| !!! | TTTATTATTGATTATTGATG+AGG | - | chr3_3:17304436-17304455 | Msa0444380:CDS | 15.0% |
| !!! | TTATTATTGATTATTGATGA+GGG | - | chr3_3:17304437-17304456 | Msa0444380:CDS | 15.0% |
| !! | TTCCCTAAAAAAAAAAAAAA+AGG | + | chr3_3:17304763-17304782 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr3_3:17305075-17305094 | None:intergenic | 15.0% |
| !!! | TAACAAGTCAATTTTTTTTT+GGG | + | chr3_3:17305272-17305291 | None:intergenic | 15.0% |
| !!! | TTAACAAGTCAATTTTTTTT+TGG | + | chr3_3:17305273-17305292 | None:intergenic | 15.0% |
| !!! | TAGATAATTTTAATTCTTGT+TGG | - | chr3_3:17305528-17305547 | Msa0444380:intron | 15.0% |
| !! | TATTTCAAATTAAACACTTA+TGG | + | chr3_3:17306152-17306171 | None:intergenic | 15.0% |
| !!! | AATAAAAAAAAAAGTGTTTG+TGG | + | chr3_3:17304367-17304386 | None:intergenic | 15.0% |
| !!! | TGATACATAATTTTTTTTTG+AGG | - | chr3_3:17304397-17304416 | Msa0444380:exon | 15.0% |
| !!! | TTTATTATTGATTATTGATG+AGG | - | chr3_3:17304436-17304455 | Msa0444380:CDS | 15.0% |
| !!! | TTATTATTGATTATTGATGA+GGG | - | chr3_3:17304437-17304456 | Msa0444380:CDS | 15.0% |
| !! | TTCCCTAAAAAAAAAAAAAA+AGG | + | chr3_3:17304763-17304782 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr3_3:17305075-17305094 | None:intergenic | 15.0% |
| !!! | TAACAAGTCAATTTTTTTTT+GGG | + | chr3_3:17305272-17305291 | None:intergenic | 15.0% |
| !!! | TTAACAAGTCAATTTTTTTT+TGG | + | chr3_3:17305273-17305292 | None:intergenic | 15.0% |
| !!! | TAGATAATTTTAATTCTTGT+TGG | - | chr3_3:17305528-17305547 | Msa0444380:intron | 15.0% |
| !! | TATTTCAAATTAAACACTTA+TGG | + | chr3_3:17306152-17306171 | None:intergenic | 15.0% |
| !!! | TACATAATTTTTTTTTGAGG+AGG | - | chr3_3:17304400-17304419 | Msa0444380:CDS | 20.0% |
| !!! | GAAACAGAATAATTATTTTC+AGG | + | chr3_3:17304630-17304649 | None:intergenic | 20.0% |
| !! | GAAAATAATTATTCTGTTTC+AGG | - | chr3_3:17304630-17304649 | Msa0444380:CDS | 20.0% |
| !! | TTGTTCACGATAAATATAAA+AGG | + | chr3_3:17304788-17304807 | None:intergenic | 20.0% |
| !! | AGAAAATGTTATTATTGCAT+TGG | + | chr3_3:17305012-17305031 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr3_3:17305089-17305108 | Msa0444380:intron | 20.0% |
| !! | AAACTATCCTTATTAACTAT+TGG | + | chr3_3:17305099-17305118 | None:intergenic | 20.0% |
| !! | AATAGTTAATAAGGATAGTT+TGG | - | chr3_3:17305098-17305117 | Msa0444380:intron | 20.0% |
| !! | GTCATTGCTAAAATATATAT+AGG | - | chr3_3:17305550-17305569 | Msa0444380:intron | 20.0% |
| !! | ACAATATATTAGAAAACGAT+AGG | + | chr3_3:17305794-17305813 | None:intergenic | 20.0% |
| !! | TTTCTATATGAAATTCCAAA+AGG | + | chr3_3:17306201-17306220 | None:intergenic | 20.0% |
| !!! | TACATAATTTTTTTTTGAGG+AGG | - | chr3_3:17304400-17304419 | Msa0444380:CDS | 20.0% |
| !!! | GAAACAGAATAATTATTTTC+AGG | + | chr3_3:17304630-17304649 | None:intergenic | 20.0% |
| !! | GAAAATAATTATTCTGTTTC+AGG | - | chr3_3:17304630-17304649 | Msa0444380:CDS | 20.0% |
| !! | TTGTTCACGATAAATATAAA+AGG | + | chr3_3:17304788-17304807 | None:intergenic | 20.0% |
| !! | AGAAAATGTTATTATTGCAT+TGG | + | chr3_3:17305012-17305031 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr3_3:17305089-17305108 | Msa0444380:intron | 20.0% |
| !! | AAACTATCCTTATTAACTAT+TGG | + | chr3_3:17305099-17305118 | None:intergenic | 20.0% |
| !! | AATAGTTAATAAGGATAGTT+TGG | - | chr3_3:17305098-17305117 | Msa0444380:intron | 20.0% |
| !! | GTCATTGCTAAAATATATAT+AGG | - | chr3_3:17305550-17305569 | Msa0444380:intron | 20.0% |
| !! | ACAATATATTAGAAAACGAT+AGG | + | chr3_3:17305794-17305813 | None:intergenic | 20.0% |
| !! | TTTCTATATGAAATTCCAAA+AGG | + | chr3_3:17306201-17306220 | None:intergenic | 20.0% |
| !! | ATAATTATTCTGTTTCAGGT+AGG | - | chr3_3:17304634-17304653 | Msa0444380:CDS | 25.0% |
| !!! | AGGGAGTATTATATTACATA+TGG | + | chr3_3:17304923-17304942 | None:intergenic | 25.0% |
| !!! | TTCAAAATGAATGTCGTTTT+AGG | + | chr3_3:17305180-17305199 | None:intergenic | 25.0% |
| !!! | AAACGACATTCATTTTGAAA+CGG | - | chr3_3:17305181-17305200 | Msa0444380:intron | 25.0% |
| !! | AGACATATATGTCGAAATTT+TGG | - | chr3_3:17305318-17305337 | Msa0444380:intron | 25.0% |
| !! | GACATATATGTCGAAATTTT+GGG | - | chr3_3:17305319-17305338 | Msa0444380:intron | 25.0% |
| !!! | TTTTCTAAGAGCACAAAATT+GGG | - | chr3_3:17305382-17305401 | Msa0444380:intron | 25.0% |
| !! | AAAGCATTTAAGAAAAACTC+AGG | + | chr3_3:17305996-17306015 | None:intergenic | 25.0% |
| ! | ATATGAAATTCCAAAAGGAA+TGG | + | chr3_3:17306196-17306215 | None:intergenic | 25.0% |
| !! | GTACTTGTTCTTTATTTACA+TGG | - | chr3_3:17306261-17306280 | Msa0444380:exon | 25.0% |
| !! | ATAATTATTCTGTTTCAGGT+AGG | - | chr3_3:17304634-17304653 | Msa0444380:CDS | 25.0% |
| !!! | AGGGAGTATTATATTACATA+TGG | + | chr3_3:17304923-17304942 | None:intergenic | 25.0% |
| !!! | TTCAAAATGAATGTCGTTTT+AGG | + | chr3_3:17305180-17305199 | None:intergenic | 25.0% |
| !!! | AAACGACATTCATTTTGAAA+CGG | - | chr3_3:17305181-17305200 | Msa0444380:intron | 25.0% |
| !! | AGACATATATGTCGAAATTT+TGG | - | chr3_3:17305318-17305337 | Msa0444380:intron | 25.0% |
| !! | GACATATATGTCGAAATTTT+GGG | - | chr3_3:17305319-17305338 | Msa0444380:intron | 25.0% |
| !!! | TTTTCTAAGAGCACAAAATT+GGG | - | chr3_3:17305382-17305401 | Msa0444380:intron | 25.0% |
| !! | AAAGCATTTAAGAAAAACTC+AGG | + | chr3_3:17305996-17306015 | None:intergenic | 25.0% |
| ! | ATATGAAATTCCAAAAGGAA+TGG | + | chr3_3:17306196-17306215 | None:intergenic | 25.0% |
| !! | GTACTTGTTCTTTATTTACA+TGG | - | chr3_3:17306261-17306280 | Msa0444380:exon | 25.0% |
| ! | ATGTTGTTTGTGAATCAATG+TGG | + | chr3_3:17304249-17304268 | None:intergenic | 30.0% |
| !! | ACATTGATTCACAAACAACA+TGG | - | chr3_3:17304248-17304267 | Msa0444380:three_prime_UTR | 30.0% |
| CAATTGAAGTTGAATCCTTT+CGG | - | chr3_3:17304565-17304584 | Msa0444380:CDS | 30.0% | |
| !! | AGTTTTATGAAAGACGATTG+TGG | - | chr3_3:17304896-17304915 | Msa0444380:intron | 30.0% |
| ! | TGTGCAAAGTATTAATTGGA+GGG | + | chr3_3:17305046-17305065 | None:intergenic | 30.0% |
| ! | GTAGTGTGCAAAGTATTAAT+TGG | + | chr3_3:17305050-17305069 | None:intergenic | 30.0% |
| !! | GTTTTCTAAGAGCACAAAAT+TGG | - | chr3_3:17305381-17305400 | Msa0444380:intron | 30.0% |
| !!! | TTGTTGCACACTTTTAAGAT+TGG | - | chr3_3:17305639-17305658 | Msa0444380:intron | 30.0% |
| AAACGATAGGCTTATATGTT+TGG | + | chr3_3:17305781-17305800 | None:intergenic | 30.0% | |
| ATCAAGATCACCAAATGTTT+GGG | - | chr3_3:17305860-17305879 | Msa0444380:intron | 30.0% | |
| TATTGATGAAATGAAGATCG+AGG | + | chr3_3:17305971-17305990 | None:intergenic | 30.0% | |
| ! | ATGTTGTTTGTGAATCAATG+TGG | + | chr3_3:17304249-17304268 | None:intergenic | 30.0% |
| !! | ACATTGATTCACAAACAACA+TGG | - | chr3_3:17304248-17304267 | Msa0444380:three_prime_UTR | 30.0% |
| CAATTGAAGTTGAATCCTTT+CGG | - | chr3_3:17304565-17304584 | Msa0444380:CDS | 30.0% | |
| !! | AGTTTTATGAAAGACGATTG+TGG | - | chr3_3:17304896-17304915 | Msa0444380:intron | 30.0% |
| ! | TGTGCAAAGTATTAATTGGA+GGG | + | chr3_3:17305046-17305065 | None:intergenic | 30.0% |
| ! | GTAGTGTGCAAAGTATTAAT+TGG | + | chr3_3:17305050-17305069 | None:intergenic | 30.0% |
| !! | GTTTTCTAAGAGCACAAAAT+TGG | - | chr3_3:17305381-17305400 | Msa0444380:intron | 30.0% |
| !!! | TTGTTGCACACTTTTAAGAT+TGG | - | chr3_3:17305639-17305658 | Msa0444380:intron | 30.0% |
| AAACGATAGGCTTATATGTT+TGG | + | chr3_3:17305781-17305800 | None:intergenic | 30.0% | |
| ATCAAGATCACCAAATGTTT+GGG | - | chr3_3:17305860-17305879 | Msa0444380:intron | 30.0% | |
| TATTGATGAAATGAAGATCG+AGG | + | chr3_3:17305971-17305990 | None:intergenic | 30.0% | |
| ! | CAGTGTTGTAAGAAGCTTTT+CGG | + | chr3_3:17304311-17304330 | None:intergenic | 35.0% |
| AAGTGTTTGTGGTAAGAAGT+AGG | + | chr3_3:17304356-17304375 | None:intergenic | 35.0% | |
| ! | TGAGTTGAGCAAAAATGTTG+AGG | - | chr3_3:17304467-17304486 | Msa0444380:CDS | 35.0% |
| GAGTTGAGCAAAAATGTTGA+GGG | - | chr3_3:17304468-17304487 | Msa0444380:CDS | 35.0% | |
| TCAAGATCAGTGTTCAACAT+TGG | + | chr3_3:17304528-17304547 | None:intergenic | 35.0% | |
| AACACTGATCTTGAGAAAGA+AGG | - | chr3_3:17304534-17304553 | Msa0444380:CDS | 35.0% | |
| ACACTGATCTTGAGAAAGAA+GGG | - | chr3_3:17304535-17304554 | Msa0444380:CDS | 35.0% | |
| CGAAAGGATTCAACTTCAAT+TGG | + | chr3_3:17304567-17304586 | None:intergenic | 35.0% | |
| TCCTTTCGGAAAAAGATTCT+TGG | - | chr3_3:17304579-17304598 | Msa0444380:CDS | 35.0% | |
| ! | TCCAAGAATCTTTTTCCGAA+AGG | + | chr3_3:17304583-17304602 | None:intergenic | 35.0% |
| ! | TTTCAGGTAGGTAAACATCA+TGG | - | chr3_3:17304646-17304665 | Msa0444380:CDS | 35.0% |
| AAACAAAAATGTCAGCACTC+AGG | - | chr3_3:17304806-17304825 | Msa0444380:intron | 35.0% | |
| AAGCGACACTTATCTTGAAA+CGG | + | chr3_3:17304946-17304965 | None:intergenic | 35.0% | |
| ! | GTGTGCAAAGTATTAATTGG+AGG | + | chr3_3:17305047-17305066 | None:intergenic | 35.0% |
| !!! | GACATTCATTTTGAAACGGA+GGG | - | chr3_3:17305185-17305204 | Msa0444380:intron | 35.0% |
| TTGTGCTCTTAGAAAACACA+TGG | + | chr3_3:17305378-17305397 | None:intergenic | 35.0% | |
| ! | TACTCTAAAAACTACCCAAG+CGG | + | chr3_3:17305754-17305773 | None:intergenic | 35.0% |
| ACTAAAGAATGCACTTGACT+GGG | - | chr3_3:17305836-17305855 | Msa0444380:intron | 35.0% | |
| CATCAAGATCACCAAATGTT+TGG | - | chr3_3:17305859-17305878 | Msa0444380:intron | 35.0% | |
| CAATATCATCTCCGACAAAT+CGG | - | chr3_3:17305939-17305958 | Msa0444380:CDS | 35.0% | |
| ! | TCACTGTTAAATTTTGCTGG+AGG | + | chr3_3:17306023-17306042 | None:intergenic | 35.0% |
| ! | CCATCACTGTTAAATTTTGC+TGG | + | chr3_3:17306026-17306045 | None:intergenic | 35.0% |
| CCAGCAAAATTTAACAGTGA+TGG | - | chr3_3:17306023-17306042 | Msa0444380:CDS | 35.0% | |
| AATTGCCAACAACCTATTCT+TGG | + | chr3_3:17306069-17306088 | None:intergenic | 35.0% | |
| ! | CAATTTCACTCCATTCCTTT+TGG | - | chr3_3:17306183-17306202 | Msa0444380:intron | 35.0% |
| ! | CAGTGTTGTAAGAAGCTTTT+CGG | + | chr3_3:17304311-17304330 | None:intergenic | 35.0% |
| AAGTGTTTGTGGTAAGAAGT+AGG | + | chr3_3:17304356-17304375 | None:intergenic | 35.0% | |
| ! | TGAGTTGAGCAAAAATGTTG+AGG | - | chr3_3:17304467-17304486 | Msa0444380:CDS | 35.0% |
| GAGTTGAGCAAAAATGTTGA+GGG | - | chr3_3:17304468-17304487 | Msa0444380:CDS | 35.0% | |
| TCAAGATCAGTGTTCAACAT+TGG | + | chr3_3:17304528-17304547 | None:intergenic | 35.0% | |
| AACACTGATCTTGAGAAAGA+AGG | - | chr3_3:17304534-17304553 | Msa0444380:CDS | 35.0% | |
| ACACTGATCTTGAGAAAGAA+GGG | - | chr3_3:17304535-17304554 | Msa0444380:CDS | 35.0% | |
| CGAAAGGATTCAACTTCAAT+TGG | + | chr3_3:17304567-17304586 | None:intergenic | 35.0% | |
| TCCTTTCGGAAAAAGATTCT+TGG | - | chr3_3:17304579-17304598 | Msa0444380:CDS | 35.0% | |
| ! | TCCAAGAATCTTTTTCCGAA+AGG | + | chr3_3:17304583-17304602 | None:intergenic | 35.0% |
| ! | TTTCAGGTAGGTAAACATCA+TGG | - | chr3_3:17304646-17304665 | Msa0444380:CDS | 35.0% |
| AAACAAAAATGTCAGCACTC+AGG | - | chr3_3:17304806-17304825 | Msa0444380:intron | 35.0% | |
| AAGCGACACTTATCTTGAAA+CGG | + | chr3_3:17304946-17304965 | None:intergenic | 35.0% | |
| ! | GTGTGCAAAGTATTAATTGG+AGG | + | chr3_3:17305047-17305066 | None:intergenic | 35.0% |
| !!! | GACATTCATTTTGAAACGGA+GGG | - | chr3_3:17305185-17305204 | Msa0444380:intron | 35.0% |
| TTGTGCTCTTAGAAAACACA+TGG | + | chr3_3:17305378-17305397 | None:intergenic | 35.0% | |
| ! | TACTCTAAAAACTACCCAAG+CGG | + | chr3_3:17305754-17305773 | None:intergenic | 35.0% |
| ACTAAAGAATGCACTTGACT+GGG | - | chr3_3:17305836-17305855 | Msa0444380:intron | 35.0% | |
| CATCAAGATCACCAAATGTT+TGG | - | chr3_3:17305859-17305878 | Msa0444380:intron | 35.0% | |
| CAATATCATCTCCGACAAAT+CGG | - | chr3_3:17305939-17305958 | Msa0444380:CDS | 35.0% | |
| ! | TCACTGTTAAATTTTGCTGG+AGG | + | chr3_3:17306023-17306042 | None:intergenic | 35.0% |
| ! | CCATCACTGTTAAATTTTGC+TGG | + | chr3_3:17306026-17306045 | None:intergenic | 35.0% |
| CCAGCAAAATTTAACAGTGA+TGG | - | chr3_3:17306023-17306042 | Msa0444380:CDS | 35.0% | |
| AATTGCCAACAACCTATTCT+TGG | + | chr3_3:17306069-17306088 | None:intergenic | 35.0% | |
| ! | CAATTTCACTCCATTCCTTT+TGG | - | chr3_3:17306183-17306202 | Msa0444380:intron | 35.0% |
| TGATTCACAAACAACATGGC+TGG | - | chr3_3:17304252-17304271 | Msa0444380:three_prime_UTR | 40.0% | |
| GATTCACAAACAACATGGCT+GGG | - | chr3_3:17304253-17304272 | Msa0444380:three_prime_UTR | 40.0% | |
| CAACATGGCTGGGATAATTA+AGG | - | chr3_3:17304263-17304282 | Msa0444380:three_prime_UTR | 40.0% | |
| ATTAAGGTTGCTGCACTTTC+TGG | - | chr3_3:17304279-17304298 | Msa0444380:three_prime_UTR | 40.0% | |
| CGAAAAGCTTCTTACAACAC+TGG | - | chr3_3:17304309-17304328 | Msa0444380:three_prime_UTR | 40.0% | |
| AAATACAAGAAGACCCCACT+GGG | + | chr3_3:17304673-17304692 | None:intergenic | 40.0% | |
| AAAATACAAGAAGACCCCAC+TGG | + | chr3_3:17304674-17304693 | None:intergenic | 40.0% | |
| GACACTTATCTTGAAACGGA+GGG | + | chr3_3:17304942-17304961 | None:intergenic | 40.0% | |
| !!! | CGACATTCATTTTGAAACGG+AGG | - | chr3_3:17305184-17305203 | Msa0444380:intron | 40.0% |
| CATGGTTAACAATGCTGTCA+AGG | + | chr3_3:17305360-17305379 | None:intergenic | 40.0% | |
| CAGTCAAGTGCATTCTTTAG+TGG | + | chr3_3:17305837-17305856 | None:intergenic | 40.0% | |
| CACTAAAGAATGCACTTGAC+TGG | - | chr3_3:17305835-17305854 | Msa0444380:intron | 40.0% | |
| TCGATGAAGATGCCAAGAAT+AGG | - | chr3_3:17306054-17306073 | Msa0444380:CDS | 40.0% | |
| AGATGCCAAGAATAGGTTGT+TGG | - | chr3_3:17306061-17306080 | Msa0444380:intron | 40.0% | |
| ! | GGCAATTCTTTTGTCCTTGA+AGG | - | chr3_3:17306082-17306101 | Msa0444380:intron | 40.0% |
| TTGCAGAGTAAATGCCTTCA+AGG | + | chr3_3:17306099-17306118 | None:intergenic | 40.0% | |
| GCATTTACTCTGCAACTTCA+AGG | - | chr3_3:17306104-17306123 | Msa0444380:intron | 40.0% | |
| TGATTCACAAACAACATGGC+TGG | - | chr3_3:17304252-17304271 | Msa0444380:three_prime_UTR | 40.0% | |
| GATTCACAAACAACATGGCT+GGG | - | chr3_3:17304253-17304272 | Msa0444380:three_prime_UTR | 40.0% | |
| CAACATGGCTGGGATAATTA+AGG | - | chr3_3:17304263-17304282 | Msa0444380:three_prime_UTR | 40.0% | |
| ATTAAGGTTGCTGCACTTTC+TGG | - | chr3_3:17304279-17304298 | Msa0444380:three_prime_UTR | 40.0% | |
| CGAAAAGCTTCTTACAACAC+TGG | - | chr3_3:17304309-17304328 | Msa0444380:three_prime_UTR | 40.0% | |
| AAATACAAGAAGACCCCACT+GGG | + | chr3_3:17304673-17304692 | None:intergenic | 40.0% | |
| AAAATACAAGAAGACCCCAC+TGG | + | chr3_3:17304674-17304693 | None:intergenic | 40.0% | |
| GACACTTATCTTGAAACGGA+GGG | + | chr3_3:17304942-17304961 | None:intergenic | 40.0% | |
| !!! | CGACATTCATTTTGAAACGG+AGG | - | chr3_3:17305184-17305203 | Msa0444380:intron | 40.0% |
| CATGGTTAACAATGCTGTCA+AGG | + | chr3_3:17305360-17305379 | None:intergenic | 40.0% | |
| CAGTCAAGTGCATTCTTTAG+TGG | + | chr3_3:17305837-17305856 | None:intergenic | 40.0% | |
| CACTAAAGAATGCACTTGAC+TGG | - | chr3_3:17305835-17305854 | Msa0444380:intron | 40.0% | |
| TCGATGAAGATGCCAAGAAT+AGG | - | chr3_3:17306054-17306073 | Msa0444380:CDS | 40.0% | |
| AGATGCCAAGAATAGGTTGT+TGG | - | chr3_3:17306061-17306080 | Msa0444380:intron | 40.0% | |
| ! | GGCAATTCTTTTGTCCTTGA+AGG | - | chr3_3:17306082-17306101 | Msa0444380:intron | 40.0% |
| TTGCAGAGTAAATGCCTTCA+AGG | + | chr3_3:17306099-17306118 | None:intergenic | 40.0% | |
| GCATTTACTCTGCAACTTCA+AGG | - | chr3_3:17306104-17306123 | Msa0444380:intron | 40.0% | |
| GAAGTAGGAACCTACCAGAA+CGG | + | chr3_3:17304341-17304360 | None:intergenic | 45.0% | |
| GTAAACATCATGGTCCCAGT+GGG | - | chr3_3:17304656-17304675 | Msa0444380:CDS | 45.0% | |
| TAAACATCATGGTCCCAGTG+GGG | - | chr3_3:17304657-17304676 | Msa0444380:CDS | 45.0% | |
| CGACACTTATCTTGAAACGG+AGG | + | chr3_3:17304943-17304962 | None:intergenic | 45.0% | |
| !! | CTGTCGTTTGACTTTTCCAG+TGG | - | chr3_3:17305605-17305624 | Msa0444380:intron | 45.0% |
| AACAACTGTTTGACTGCCAC+TGG | + | chr3_3:17305624-17305643 | None:intergenic | 45.0% | |
| !!! | CGGTCGTTTAGCTTTTCTGA+TGG | + | chr3_3:17305731-17305750 | None:intergenic | 45.0% |
| TCTAAAAACTACCCAAGCGG+CGG | + | chr3_3:17305751-17305770 | None:intergenic | 45.0% | |
| AGATCACCAAATGTTTGGGC+TGG | - | chr3_3:17305864-17305883 | Msa0444380:intron | 45.0% | |
| GGTTTACCAGCCCAAACATT+TGG | + | chr3_3:17305873-17305892 | None:intergenic | 45.0% | |
| ! | CGAGGAAAACTCCGATTTGT+CGG | + | chr3_3:17305953-17305972 | None:intergenic | 45.0% |
| GAAGTAGGAACCTACCAGAA+CGG | + | chr3_3:17304341-17304360 | None:intergenic | 45.0% | |
| GTAAACATCATGGTCCCAGT+GGG | - | chr3_3:17304656-17304675 | Msa0444380:CDS | 45.0% | |
| TAAACATCATGGTCCCAGTG+GGG | - | chr3_3:17304657-17304676 | Msa0444380:CDS | 45.0% | |
| CGACACTTATCTTGAAACGG+AGG | + | chr3_3:17304943-17304962 | None:intergenic | 45.0% | |
| !! | CTGTCGTTTGACTTTTCCAG+TGG | - | chr3_3:17305605-17305624 | Msa0444380:intron | 45.0% |
| AACAACTGTTTGACTGCCAC+TGG | + | chr3_3:17305624-17305643 | None:intergenic | 45.0% | |
| !!! | CGGTCGTTTAGCTTTTCTGA+TGG | + | chr3_3:17305731-17305750 | None:intergenic | 45.0% |
| TCTAAAAACTACCCAAGCGG+CGG | + | chr3_3:17305751-17305770 | None:intergenic | 45.0% | |
| AGATCACCAAATGTTTGGGC+TGG | - | chr3_3:17305864-17305883 | Msa0444380:intron | 45.0% | |
| GGTTTACCAGCCCAAACATT+TGG | + | chr3_3:17305873-17305892 | None:intergenic | 45.0% | |
| ! | CGAGGAAAACTCCGATTTGT+CGG | + | chr3_3:17305953-17305972 | None:intergenic | 45.0% |
| !!! | TTGAATTTTTATTTATAAAA+TGG | - | chr3_3:17304861-17304880 | Msa0444380:intron | 5.0% |
| !!! | TTGAATTTTTATTTATAAAA+TGG | - | chr3_3:17304861-17304880 | Msa0444380:intron | 5.0% |
| ! | AACACTGGTCTCATCCGTTC+TGG | - | chr3_3:17304324-17304343 | Msa0444380:three_prime_UTR | 50.0% |
| GGTAAACATCATGGTCCCAG+TGG | - | chr3_3:17304655-17304674 | Msa0444380:CDS | 50.0% | |
| !! | TGTTTGGGCTGGTAAACCTG+CGG | - | chr3_3:17305875-17305894 | Msa0444380:intron | 50.0% |
| GCAATAGTGAGTGCTAGAGG+AGG | - | chr3_3:17305897-17305916 | Msa0444380:CDS | 50.0% | |
| ! | AACACTGGTCTCATCCGTTC+TGG | - | chr3_3:17304324-17304343 | Msa0444380:three_prime_UTR | 50.0% |
| GGTAAACATCATGGTCCCAG+TGG | - | chr3_3:17304655-17304674 | Msa0444380:CDS | 50.0% | |
| !! | TGTTTGGGCTGGTAAACCTG+CGG | - | chr3_3:17305875-17305894 | Msa0444380:intron | 50.0% |
| GCAATAGTGAGTGCTAGAGG+AGG | - | chr3_3:17305897-17305916 | Msa0444380:CDS | 50.0% | |
| CTGGTCTCATCCGTTCTGGT+AGG | - | chr3_3:17304328-17304347 | Msa0444380:three_prime_UTR | 55.0% | |
| AAAGCTAAACGACCGCCGCT+TGG | - | chr3_3:17305736-17305755 | Msa0444380:intron | 55.0% | |
| AAGCTAAACGACCGCCGCTT+GGG | - | chr3_3:17305737-17305756 | Msa0444380:intron | 55.0% | |
| CTAGCACTCACTATTGCCGC+AGG | + | chr3_3:17305894-17305913 | None:intergenic | 55.0% | |
| GCGGCAATAGTGAGTGCTAG+AGG | - | chr3_3:17305894-17305913 | Msa0444380:CDS | 55.0% | |
| GTGAGTGCTAGAGGAGGACA+TGG | - | chr3_3:17305903-17305922 | Msa0444380:CDS | 55.0% | |
| AGTGCTAGAGGAGGACATGG+TGG | - | chr3_3:17305906-17305925 | Msa0444380:CDS | 55.0% | |
| CTGGTCTCATCCGTTCTGGT+AGG | - | chr3_3:17304328-17304347 | Msa0444380:three_prime_UTR | 55.0% | |
| AAAGCTAAACGACCGCCGCT+TGG | - | chr3_3:17305736-17305755 | Msa0444380:intron | 55.0% | |
| AAGCTAAACGACCGCCGCTT+GGG | - | chr3_3:17305737-17305756 | Msa0444380:intron | 55.0% | |
| CTAGCACTCACTATTGCCGC+AGG | + | chr3_3:17305894-17305913 | None:intergenic | 55.0% | |
| GCGGCAATAGTGAGTGCTAG+AGG | - | chr3_3:17305894-17305913 | Msa0444380:CDS | 55.0% | |
| GTGAGTGCTAGAGGAGGACA+TGG | - | chr3_3:17305903-17305922 | Msa0444380:CDS | 55.0% | |
| AGTGCTAGAGGAGGACATGG+TGG | - | chr3_3:17305906-17305925 | Msa0444380:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 17304205 | 17306331 | 17304205 | ID=Msa0444380;Name=Msa0444380 |
| chr3_3 | mRNA | 17304205 | 17306331 | 17304205 | ID=Msa0444380-mRNA-1;Parent=Msa0444380;Name=Msa0444380-mRNA-1;_AED=0.27;_eAED=0.27;_QI=62|1|0.66|1|1|1|3|195|190 |
| chr3_3 | exon | 17304205 | 17304704 | 17304205 | ID=Msa0444380-mRNA-1:exon:3691;Parent=Msa0444380-mRNA-1 |
| chr3_3 | exon | 17305885 | 17306073 | 17305885 | ID=Msa0444380-mRNA-1:exon:3690;Parent=Msa0444380-mRNA-1 |
| chr3_3 | exon | 17306191 | 17306331 | 17306191 | ID=Msa0444380-mRNA-1:exon:3689;Parent=Msa0444380-mRNA-1 |
| chr3_3 | five_prime_UTR | 17306270 | 17306331 | 17306270 | ID=Msa0444380-mRNA-1:five_prime_utr;Parent=Msa0444380-mRNA-1 |
| chr3_3 | CDS | 17306191 | 17306269 | 17306191 | ID=Msa0444380-mRNA-1:cds;Parent=Msa0444380-mRNA-1 |
| chr3_3 | CDS | 17305885 | 17306073 | 17305885 | ID=Msa0444380-mRNA-1:cds;Parent=Msa0444380-mRNA-1 |
| chr3_3 | CDS | 17304400 | 17304704 | 17304400 | ID=Msa0444380-mRNA-1:cds;Parent=Msa0444380-mRNA-1 |
| chr3_3 | three_prime_UTR | 17304205 | 17304399 | 17304205 | ID=Msa0444380-mRNA-1:three_prime_utr;Parent=Msa0444380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
