Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0959770 | sp|Q9SZD6|PETS_ARATH | 53.356 | 298 | 107 | 8 | 1 | 270 | 536 | 829 | 1.44e-70 | 236 |
| Msa0959770 | sp|Q9SZD6|PETS_ARATH | 51.111 | 135 | 59 | 2 | 1 | 132 | 774 | 904 | 1.07e-31 | 127 |
| Msa0959770 | sp|Q9SZD6|PETS_ARATH | 58.763 | 97 | 38 | 1 | 174 | 270 | 497 | 591 | 2.68e-26 | 111 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0959770 | G7KPU0 | 52.632 | 114 | 43 | 2 | 165 | 270 | 571 | 681 | 1.14e-21 | 105 |
| Msa0959770 | G7KPU0 | 59.532 | 299 | 90 | 4 | 1 | 270 | 626 | 922 | 1.99e-91 | 301 |
| Msa0959770 | G7KPU0 | 61.386 | 101 | 39 | 0 | 32 | 132 | 897 | 997 | 3.72e-31 | 132 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa0959770 | 0.818065 | 2.381155e-52 | -8.615850e-47 |
| Msa0657970 | Msa0959770 | 0.841895 | 3.599726e-58 | -8.615850e-47 |
| Msa0678930 | Msa0959770 | 0.800115 | 1.676832e-48 | -8.615850e-47 |
| Msa0736210 | Msa0959770 | 0.808752 | 2.654497e-50 | -8.615850e-47 |
| Msa0766630 | Msa0959770 | 0.812724 | 3.670230e-51 | -8.615850e-47 |
| Msa0777790 | Msa0959770 | 0.822293 | 2.559348e-53 | -8.615850e-47 |
| Msa0777850 | Msa0959770 | 0.823233 | 1.546354e-53 | -8.615850e-47 |
| Msa0777930 | Msa0959770 | 0.812883 | 3.388465e-51 | -8.615850e-47 |
| Msa0789250 | Msa0959770 | 0.806632 | 7.484408e-50 | -8.615850e-47 |
| Msa0127660 | Msa0959770 | 0.816423 | 5.573056e-52 | -8.615850e-47 |
| Msa0153910 | Msa0959770 | 0.816893 | 4.371885e-52 | -8.615850e-47 |
| Msa0157290 | Msa0959770 | 0.817166 | 3.796781e-52 | -8.615850e-47 |
| Msa0188830 | Msa0959770 | 0.802714 | 4.919891e-49 | -8.615850e-47 |
| Msa0200260 | Msa0959770 | 0.812092 | 5.044745e-51 | -8.615850e-47 |
| Msa0214300 | Msa0959770 | 0.809415 | 1.913441e-50 | -8.615850e-47 |
| Msa0373930 | Msa0959770 | 0.814855 | 1.245524e-51 | -8.615850e-47 |
| Msa0397210 | Msa0959770 | 0.800245 | 1.577669e-48 | -8.615850e-47 |
| Msa0402290 | Msa0959770 | 0.819002 | 1.459716e-52 | -8.615850e-47 |
| Msa0407960 | Msa0959770 | 0.812900 | 3.359904e-51 | -8.615850e-47 |
| Msa0432300 | Msa0959770 | 0.831566 | 1.552709e-55 | -8.615850e-47 |
| Msa0437990 | Msa0959770 | 0.826402 | 2.767189e-54 | -8.615850e-47 |
| Msa0262520 | Msa0959770 | 0.804819 | 1.798390e-49 | -8.615850e-47 |
| Msa0345970 | Msa0959770 | 0.808413 | 3.136004e-50 | -8.615850e-47 |
| Msa0355220 | Msa0959770 | 0.809465 | 1.867480e-50 | -8.615850e-47 |
| Msa0357340 | Msa0959770 | 0.809926 | 1.485907e-50 | -8.615850e-47 |
| Msa0483650 | Msa0959770 | 0.814081 | 1.847551e-51 | -8.615850e-47 |
| Msa0533070 | Msa0959770 | 0.806726 | 7.150122e-50 | -8.615850e-47 |
| Msa0558640 | Msa0959770 | 0.823766 | 1.160824e-53 | -8.615850e-47 |
| Msa0585300 | Msa0959770 | 0.804953 | 1.686186e-49 | -8.615850e-47 |
| Msa0880140 | Msa0959770 | 0.816681 | 4.878151e-52 | -8.615850e-47 |
| Msa0885280 | Msa0959770 | 0.830533 | 2.783642e-55 | -8.615850e-47 |
| Msa0885290 | Msa0959770 | 0.810391 | 1.179641e-50 | -8.615850e-47 |
| Msa0909120 | Msa0959770 | 0.842212 | 2.967787e-58 | -8.615850e-47 |
| Msa0909140 | Msa0959770 | 0.826526 | 2.584396e-54 | -8.615850e-47 |
| Msa0918220 | Msa0959770 | 0.811880 | 5.609503e-51 | -8.615850e-47 |
| Msa0921230 | Msa0959770 | 0.804375 | 2.226703e-49 | -8.615850e-47 |
| Msa0935910 | Msa0959770 | 0.814487 | 1.502638e-51 | -8.615850e-47 |
| Msa0954910 | Msa0959770 | 0.801101 | 1.055506e-48 | -8.615850e-47 |
| Msa0959770 | Msa0969450 | 0.811069 | 8.419643e-51 | -8.615850e-47 |
| Msa0959770 | Msa0969520 | 0.800398 | 1.468611e-48 | -8.615850e-47 |
| Msa0959770 | Msa1000050 | 0.804601 | 1.997770e-49 | -8.615850e-47 |
| Msa0959770 | Msa1014540 | 0.800447 | 1.435340e-48 | -8.615850e-47 |
| Msa0959770 | Msa1075220 | -0.803277 | 3.764829e-49 | -8.615850e-47 |
| Msa0959770 | Msa1079180 | 0.817280 | 3.579392e-52 | -8.615850e-47 |
| Msa0959770 | Msa1082500 | 0.823885 | 1.088625e-53 | -8.615850e-47 |
| Msa0959770 | Msa1136090 | 0.806573 | 7.703101e-50 | -8.615850e-47 |
| Msa0959770 | Msa1139000 | -0.801846 | 7.426612e-49 | -8.615850e-47 |
| Msa0959770 | Msa1160670 | 0.816717 | 4.788280e-52 | -8.615850e-47 |
| Msa0959770 | Msa1176760 | 0.800825 | 1.201471e-48 | -8.615850e-47 |
| Msa0959770 | Msa1242220 | 0.828197 | 1.027470e-54 | -8.615850e-47 |
| Msa0959770 | Msa1253000 | 0.816011 | 6.888112e-52 | -8.615850e-47 |
| Msa0959770 | Msa1283860 | 0.844756 | 6.209164e-59 | -8.615850e-47 |
| Msa0959770 | Msa1322890 | 0.827704 | 1.350764e-54 | -8.615850e-47 |
| Msa0959770 | Msa1324780 | 0.838871 | 2.222559e-57 | -8.615850e-47 |
| Msa0959770 | Msa1357530 | 0.802562 | 5.289629e-49 | -8.615850e-47 |
| Msa0959770 | Msa1372760 | 0.800639 | 1.311161e-48 | -8.615850e-47 |
| Msa0959770 | Msa1378760 | 0.807406 | 5.133459e-50 | -8.615850e-47 |
| Msa0959770 | Msa1392260 | 0.800936 | 1.140536e-48 | -8.615850e-47 |
| Msa0959770 | Msa1397860 | 0.811314 | 7.447103e-51 | -8.615850e-47 |
| Msa0959770 | Msa1410640 | 0.806672 | 7.340519e-50 | -8.615850e-47 |
| Msa0959770 | Msa1435650 | 0.805608 | 1.229832e-49 | -8.615850e-47 |
| Msa0959770 | Msa1438250 | 0.840777 | 7.086897e-58 | -8.615850e-47 |
| Msa0959770 | Msa1453720 | 0.810186 | 1.306066e-50 | -8.615850e-47 |
| Msa0959770 | Msa1455460 | 0.801184 | 1.014776e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0959770 | MtrunA17_Chr6g0486531 | 59.532 | 299 | 90 | 4 | 1 | 270 | 626 | 922 | 3.84e-95 | 301 |
| Msa0959770 | MtrunA17_Chr6g0486531 | 61.386 | 101 | 39 | 0 | 32 | 132 | 897 | 997 | 7.16e-35 | 132 |
| Msa0959770 | MtrunA17_Chr6g0486531 | 52.632 | 114 | 43 | 2 | 165 | 270 | 571 | 681 | 2.20e-25 | 105 |
| Msa0959770 | MtrunA17_Chr6g0477831 | 85.227 | 88 | 13 | 0 | 20 | 107 | 3 | 90 | 9.53e-50 | 159 |
| Msa0959770 | MtrunA17_Chr6g0460441 | 55.660 | 106 | 26 | 1 | 31 | 136 | 59 | 143 | 6.16e-29 | 107 |
| Msa0959770 | MtrunA17_Chr6g0460441 | 63.014 | 73 | 27 | 0 | 198 | 270 | 13 | 85 | 3.34e-25 | 97.8 |
| Msa0959770 | MtrunA17_Chr6g0486301 | 71.951 | 82 | 13 | 1 | 45 | 126 | 1033 | 1104 | 5.87e-28 | 112 |
| Msa0959770 | MtrunA17_Chr6g0486211 | 86.441 | 59 | 8 | 0 | 201 | 259 | 22 | 80 | 6.86e-27 | 100 |
| Msa0959770 | MtrunA17_Chr6g0486321 | 81.538 | 65 | 12 | 0 | 202 | 266 | 44 | 108 | 1.19e-26 | 102 |
| Msa0959770 | MtrunA17_Chr6g0486491 | 82.143 | 56 | 10 | 0 | 215 | 270 | 1 | 56 | 6.43e-24 | 92.8 |
| Msa0959770 | MtrunA17_Chr6g0486241 | 85.714 | 56 | 8 | 0 | 201 | 256 | 47 | 102 | 2.19e-23 | 94.4 |
| Msa0959770 | MtrunA17_Chr2g0299581 | 48.544 | 103 | 38 | 2 | 31 | 132 | 46 | 134 | 3.83e-23 | 93.6 |
| Msa0959770 | MtrunA17_Chr6g0484381 | 90.476 | 42 | 4 | 0 | 229 | 270 | 36 | 77 | 9.08e-18 | 78.6 |
| Msa0959770 | MtrunA17_Chr6g0484381 | 41.758 | 91 | 24 | 1 | 42 | 132 | 62 | 123 | 1.30e-13 | 67.4 |
| Msa0959770 | MtrunA17_Chr2g0299591 | 89.474 | 38 | 4 | 0 | 202 | 239 | 25 | 62 | 7.36e-16 | 70.5 |
| Msa0959770 | MtrunA17_Chr6g0486281 | 59.574 | 47 | 19 | 0 | 80 | 126 | 1 | 47 | 1.77e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0959770 | AT4G29060.1 | 53.356 | 298 | 107 | 8 | 1 | 270 | 536 | 829 | 1.46e-71 | 236 |
| Msa0959770 | AT4G29060.1 | 51.111 | 135 | 59 | 2 | 1 | 132 | 774 | 904 | 1.09e-32 | 127 |
| Msa0959770 | AT4G29060.1 | 58.763 | 97 | 38 | 1 | 174 | 270 | 497 | 591 | 2.73e-27 | 111 |
| Msa0959770 | AT4G29060.2 | 48.872 | 133 | 59 | 3 | 1 | 132 | 536 | 660 | 1.31e-29 | 117 |
| Msa0959770 | AT4G29060.2 | 58.763 | 97 | 38 | 1 | 174 | 270 | 497 | 591 | 2.13e-27 | 111 |
Find 52 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACTGTACAAGAGCTTCTT+AGG | 0.309391 | 6_3:+77202941 | Msa0959770:CDS |
| AAATTCCTCAGGAGTGTCTT+TGG | 0.320407 | 6_3:-77203149 | None:intergenic |
| GTTCAATCTCGGAGAGGGTT+TGG | 0.344856 | 6_3:+77203381 | Msa0959770:CDS |
| GCTTCTGCAGCAGCAGCAGC+AGG | 0.357274 | 6_3:-77203483 | None:intergenic |
| TCTTTCACTGGAGTAGTTAC+CGG | 0.365022 | 6_3:-77203456 | None:intergenic |
| CTAGCAGCTGAAGGAAGAAT+TGG | 0.376079 | 6_3:+77204634 | Msa0959770:CDS |
| AAGCAACTAAGAGAAGAAAT+AGG | 0.399165 | 6_3:+77204496 | Msa0959770:CDS |
| AAGCAACTTCGGGACGAAAC+AGG | 0.415386 | 6_3:+77202906 | Msa0959770:CDS |
| TTACTTTGGTTCCATCTCCT+TGG | 0.416275 | 6_3:-77203505 | None:intergenic |
| TGGTAACAACATTCTCTACT+TGG | 0.432028 | 6_3:-77203129 | None:intergenic |
| TCTTTCTTCACAAATTCCTC+AGG | 0.442126 | 6_3:-77203160 | None:intergenic |
| CGACTTCAGCAGCAAAATCC+TGG | 0.452727 | 6_3:-77203413 | None:intergenic |
| GGTAACAACATTCTCTACTT+GGG | 0.462914 | 6_3:-77203128 | None:intergenic |
| CGAAGTTGCTTCACAAGTGC+TGG | 0.465644 | 6_3:-77202894 | None:intergenic |
| AGAAATAGGTGCAGGAATGA+TGG | 0.468499 | 6_3:+77204510 | Msa0959770:CDS |
| GGATTTACAGTTGCTTGAGC+AGG | 0.468680 | 6_3:+77203275 | Msa0959770:CDS |
| CAGCACTTGTGAAGCAACTT+CGG | 0.472018 | 6_3:+77202895 | Msa0959770:CDS |
| GAAATCAACGGTAGTGGTCT+CGG | 0.473342 | 6_3:+77204460 | Msa0959770:intron |
| TGCTGCTGCTGCAGAAGCCA+AGG | 0.476936 | 6_3:+77203488 | Msa0959770:CDS |
| CGAAACAGGAGCTGGAATGA+TGG | 0.479672 | 6_3:+77202920 | Msa0959770:CDS |
| ACGCATCAATGTTCTAATTG+AGG | 0.480136 | 6_3:+77204675 | Msa0959770:CDS |
| GCAGCAGGCTCCTCTTTCAC+TGG | 0.493343 | 6_3:-77203468 | None:intergenic |
| GTTCTTACATTCATGACAGC+AGG | 0.504575 | 6_3:+77203002 | Msa0959770:CDS |
| GGGACATGCCGCCACTTGCA+TGG | 0.511736 | 6_3:-77203107 | None:intergenic |
| AATAGATCAAGGATTGTTGA+AGG | 0.517499 | 6_3:+77203232 | Msa0959770:CDS |
| TCATCCGCTGATAAGAAATC+CGG | 0.519276 | 6_3:+77204607 | Msa0959770:CDS |
| AACGGAGATAGAAATGCAAA+AGG | 0.524297 | 6_3:+77203183 | Msa0959770:CDS |
| AACCGAAGCAAAATAGATCA+AGG | 0.527437 | 6_3:+77203221 | Msa0959770:CDS |
| GGAATTTGTGAAGAAAGAAA+CGG | 0.529911 | 6_3:+77203165 | Msa0959770:CDS |
| AACAGAAGGTGATCTTGAAA+AGG | 0.530288 | 6_3:+77204555 | Msa0959770:CDS |
| AGCACTTGTGAAGCAACTTC+GGG | 0.530877 | 6_3:+77202896 | Msa0959770:CDS |
| TACATTCATGACAGCAGGAT+CGG | 0.532555 | 6_3:+77203007 | Msa0959770:CDS |
| GTGAGGTTCAATCTCGGAGA+GGG | 0.537237 | 6_3:+77203376 | Msa0959770:CDS |
| GCTCTTTGAAAATTTCACCT+TGG | 0.539157 | 6_3:-77203069 | None:intergenic |
| CTTCGGGACGAAACAGGAGC+TGG | 0.545385 | 6_3:+77202912 | Msa0959770:CDS |
| GGTAACTACTCCAGTGAAAG+AGG | 0.553754 | 6_3:+77203458 | Msa0959770:CDS |
| GTAACAACATTCTCTACTTG+GGG | 0.553869 | 6_3:-77203127 | None:intergenic |
| CTAAGAGAAGAAATAGGTGC+AGG | 0.556573 | 6_3:+77204502 | Msa0959770:CDS |
| CGAAAGTTAAAAGGTTTGTG+AGG | 0.557279 | 6_3:+77203359 | Msa0959770:intron |
| GAGACAGATTTCGTCTTCCA+AGG | 0.566973 | 6_3:+77203052 | Msa0959770:CDS |
| TGCTGCAGAAGCCAAGGAGA+TGG | 0.570059 | 6_3:+77203494 | Msa0959770:CDS |
| AAAGCTCTTGCTGAAACAGA+AGG | 0.590129 | 6_3:+77204541 | Msa0959770:CDS |
| TCCGGAAAACTAGCAGCTGA+AGG | 0.605549 | 6_3:+77204625 | Msa0959770:CDS |
| AGGTTTGTGAGGTTCAATCT+CGG | 0.617664 | 6_3:+77203370 | Msa0959770:intron |
| TGATATAGCCATGCAAGTGG+CGG | 0.623095 | 6_3:+77203099 | Msa0959770:CDS |
| CGATGATATAGCCATGCAAG+TGG | 0.640382 | 6_3:+77203096 | Msa0959770:CDS |
| AGGGTTTGGAAAAGAAAACC+AGG | 0.642655 | 6_3:+77203395 | Msa0959770:CDS |
| GACAGATAAGGAAAGACTCG+AGG | 0.643486 | 6_3:+77203254 | Msa0959770:CDS |
| GTGCAGACAAGAAAACAGCT+AGG | 0.648547 | 6_3:+77202980 | Msa0959770:CDS |
| TGTGAGGTTCAATCTCGGAG+AGG | 0.653160 | 6_3:+77203375 | Msa0959770:CDS |
| GGATTGTTGAAGGACAGATA+AGG | 0.664515 | 6_3:+77203242 | Msa0959770:CDS |
| TGTTACCAAAGACACTCCTG+AGG | 0.752881 | 6_3:+77203144 | Msa0959770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAACATATATATAAGTA+TGG | - | chr6_3:77204175-77204194 | None:intergenic | 10.0% |
| !! | ATTTAACATATATATAAGTA+TGG | - | chr6_3:77204175-77204194 | None:intergenic | 10.0% |
| !! | AGTTATTTAATTACGAAATT+TGG | + | chr6_3:77203557-77203576 | Msa0959770:intron | 15.0% |
| !! | GAAACTTTAAATTAAGATAA+AGG | - | chr6_3:77203634-77203653 | None:intergenic | 15.0% |
| !! | AGAAAAATTGTGAAAAATAA+TGG | + | chr6_3:77204395-77204414 | Msa0959770:intron | 15.0% |
| !! | AGTTATTTAATTACGAAATT+TGG | + | chr6_3:77203557-77203576 | Msa0959770:intron | 15.0% |
| !! | GAAACTTTAAATTAAGATAA+AGG | - | chr6_3:77203634-77203653 | None:intergenic | 15.0% |
| !! | AGAAAAATTGTGAAAAATAA+TGG | + | chr6_3:77204395-77204414 | Msa0959770:intron | 15.0% |
| !! | TAAATAACTCACTAACAAAT+AGG | - | chr6_3:77203546-77203565 | None:intergenic | 20.0% |
| !!! | CTTAATTTAAAGTTTCAAAC+AGG | + | chr6_3:77203638-77203657 | Msa0959770:intron | 20.0% |
| !!! | ATACTATGTCTTAATTTTGA+TGG | - | chr6_3:77203860-77203879 | None:intergenic | 20.0% |
| !! | AACTATGGAAATGTAATAAT+GGG | - | chr6_3:77203917-77203936 | None:intergenic | 20.0% |
| !! | TAACTATGGAAATGTAATAA+TGG | - | chr6_3:77203918-77203937 | None:intergenic | 20.0% |
| !!! | TCACTTTTGAATTATACTAA+AGG | + | chr6_3:77204084-77204103 | Msa0959770:intron | 20.0% |
| !! | AACATATATATAAGTATGGA+GGG | - | chr6_3:77204171-77204190 | None:intergenic | 20.0% |
| !! | TAACATATATATAAGTATGG+AGG | - | chr6_3:77204172-77204191 | None:intergenic | 20.0% |
| !! | AATATTATCTGAATTGTTCT+TGG | + | chr6_3:77204192-77204211 | Msa0959770:intron | 20.0% |
| !! | TAAATAACTCACTAACAAAT+AGG | - | chr6_3:77203546-77203565 | None:intergenic | 20.0% |
| !!! | CTTAATTTAAAGTTTCAAAC+AGG | + | chr6_3:77203638-77203657 | Msa0959770:intron | 20.0% |
| !!! | ATACTATGTCTTAATTTTGA+TGG | - | chr6_3:77203860-77203879 | None:intergenic | 20.0% |
| !! | AACTATGGAAATGTAATAAT+GGG | - | chr6_3:77203917-77203936 | None:intergenic | 20.0% |
| !! | TAACTATGGAAATGTAATAA+TGG | - | chr6_3:77203918-77203937 | None:intergenic | 20.0% |
| !!! | TCACTTTTGAATTATACTAA+AGG | + | chr6_3:77204084-77204103 | Msa0959770:intron | 20.0% |
| !! | AACATATATATAAGTATGGA+GGG | - | chr6_3:77204171-77204190 | None:intergenic | 20.0% |
| !! | TAACATATATATAAGTATGG+AGG | - | chr6_3:77204172-77204191 | None:intergenic | 20.0% |
| !! | AATATTATCTGAATTGTTCT+TGG | + | chr6_3:77204192-77204211 | Msa0959770:intron | 20.0% |
| ! | GAGAAAATACGAAAGTTAAA+AGG | + | chr6_3:77203350-77203369 | Msa0959770:intron | 25.0% |
| !!! | GAAATTTGGTAATTTGTTTC+TGG | + | chr6_3:77203571-77203590 | Msa0959770:intron | 25.0% |
| !!! | GGTTGTTTTGTTTAAAATGT+AGG | + | chr6_3:77203710-77203729 | Msa0959770:intron | 25.0% |
| !! | AAAATGATCAACTAGACTTT+TGG | - | chr6_3:77203763-77203782 | None:intergenic | 25.0% |
| !!! | GTCTAGTTGATCATTTTTAA+AGG | + | chr6_3:77203766-77203785 | Msa0959770:intron | 25.0% |
| ! | ATTAAATCTTCAGTTCATCA+AGG | + | chr6_3:77203792-77203811 | Msa0959770:intron | 25.0% |
| ! | GAGAAAATACGAAAGTTAAA+AGG | + | chr6_3:77203350-77203369 | Msa0959770:intron | 25.0% |
| !!! | GAAATTTGGTAATTTGTTTC+TGG | + | chr6_3:77203571-77203590 | Msa0959770:intron | 25.0% |
| !!! | GGTTGTTTTGTTTAAAATGT+AGG | + | chr6_3:77203710-77203729 | Msa0959770:intron | 25.0% |
| !! | AAAATGATCAACTAGACTTT+TGG | - | chr6_3:77203763-77203782 | None:intergenic | 25.0% |
| !!! | GTCTAGTTGATCATTTTTAA+AGG | + | chr6_3:77203766-77203785 | Msa0959770:intron | 25.0% |
| ! | ATTAAATCTTCAGTTCATCA+AGG | + | chr6_3:77203792-77203811 | Msa0959770:intron | 25.0% |
| GGAATTTGTGAAGAAAGAAA+CGG | + | chr6_3:77203165-77203184 | Msa0959770:CDS | 30.0% | |
| ! | ATCCTTGATCTATTTTGCTT+CGG | - | chr6_3:77203226-77203245 | None:intergenic | 30.0% |
| AATAGATCAAGGATTGTTGA+AGG | + | chr6_3:77203232-77203251 | Msa0959770:CDS | 30.0% | |
| ATTCATAGAACGACTTACTT+TGG | - | chr6_3:77203522-77203541 | None:intergenic | 30.0% | |
| TAAAAGGAAAAACTACAGCA+GGG | + | chr6_3:77203606-77203625 | Msa0959770:intron | 30.0% | |
| TATATATAAGTATGGAGGGA+AGG | - | chr6_3:77204167-77204186 | None:intergenic | 30.0% | |
| ! | GTCATACTTAATCACTGATT+AGG | - | chr6_3:77204234-77204253 | None:intergenic | 30.0% |
| TTAGTTGCTTAACCAAAAAG+AGG | - | chr6_3:77204486-77204505 | None:intergenic | 30.0% | |
| AAGCAACTAAGAGAAGAAAT+AGG | + | chr6_3:77204496-77204515 | Msa0959770:CDS | 30.0% | |
| GGAATTTGTGAAGAAAGAAA+CGG | + | chr6_3:77203165-77203184 | Msa0959770:CDS | 30.0% | |
| ! | ATCCTTGATCTATTTTGCTT+CGG | - | chr6_3:77203226-77203245 | None:intergenic | 30.0% |
| AATAGATCAAGGATTGTTGA+AGG | + | chr6_3:77203232-77203251 | Msa0959770:CDS | 30.0% | |
| ATTCATAGAACGACTTACTT+TGG | - | chr6_3:77203522-77203541 | None:intergenic | 30.0% | |
| TAAAAGGAAAAACTACAGCA+GGG | + | chr6_3:77203606-77203625 | Msa0959770:intron | 30.0% | |
| TATATATAAGTATGGAGGGA+AGG | - | chr6_3:77204167-77204186 | None:intergenic | 30.0% | |
| ! | GTCATACTTAATCACTGATT+AGG | - | chr6_3:77204234-77204253 | None:intergenic | 30.0% |
| TTAGTTGCTTAACCAAAAAG+AGG | - | chr6_3:77204486-77204505 | None:intergenic | 30.0% | |
| AAGCAACTAAGAGAAGAAAT+AGG | + | chr6_3:77204496-77204515 | Msa0959770:CDS | 30.0% | |
| CAAGAGCTTCTTAGGAAAAA+AGG | + | chr6_3:77202949-77202968 | Msa0959770:CDS | 35.0% | |
| ! | GCTCTTTGAAAATTTCACCT+TGG | - | chr6_3:77203072-77203091 | None:intergenic | 35.0% |
| GTAACAACATTCTCTACTTG+GGG | - | chr6_3:77203130-77203149 | None:intergenic | 35.0% | |
| GGTAACAACATTCTCTACTT+GGG | - | chr6_3:77203131-77203150 | None:intergenic | 35.0% | |
| TGGTAACAACATTCTCTACT+TGG | - | chr6_3:77203132-77203151 | None:intergenic | 35.0% | |
| TCTTTCTTCACAAATTCCTC+AGG | - | chr6_3:77203163-77203182 | None:intergenic | 35.0% | |
| AACGGAGATAGAAATGCAAA+AGG | + | chr6_3:77203183-77203202 | Msa0959770:CDS | 35.0% | |
| AACCGAAGCAAAATAGATCA+AGG | + | chr6_3:77203221-77203240 | Msa0959770:CDS | 35.0% | |
| AAGCAGACAATTGCAACTAT+TGG | + | chr6_3:77203328-77203347 | Msa0959770:intron | 35.0% | |
| CGAAAGTTAAAAGGTTTGTG+AGG | + | chr6_3:77203359-77203378 | Msa0959770:intron | 35.0% | |
| CTGGAAAGCTACATTCTAAA+AGG | + | chr6_3:77203590-77203609 | Msa0959770:intron | 35.0% | |
| CTAAAAGGAAAAACTACAGC+AGG | + | chr6_3:77203605-77203624 | Msa0959770:intron | 35.0% | |
| AAAAGGAAAAACTACAGCAG+GGG | + | chr6_3:77203607-77203626 | Msa0959770:intron | 35.0% | |
| GTCATTTCTTCATGTCAAGT+TGG | + | chr6_3:77203689-77203708 | Msa0959770:intron | 35.0% | |
| TAATGGGAAAAACTACGACA+GGG | - | chr6_3:77203901-77203920 | None:intergenic | 35.0% | |
| ! | ATAATGGGAAAAACTACGAC+AGG | - | chr6_3:77203902-77203921 | None:intergenic | 35.0% |
| TTTAATGCAACCCCTAAGAA+AGG | - | chr6_3:77203953-77203972 | None:intergenic | 35.0% | |
| ! | CAGAACTACAAGCTTTATCA+GGG | + | chr6_3:77204110-77204129 | Msa0959770:intron | 35.0% |
| AAACTGTAATGTTGTGTTGC+CGG | + | chr6_3:77204438-77204457 | Msa0959770:intron | 35.0% | |
| AACAGAAGGTGATCTTGAAA+AGG | + | chr6_3:77204555-77204574 | Msa0959770:CDS | 35.0% | |
| CAAGCATACCTCAGAAAAAA+GGG | + | chr6_3:77204580-77204599 | Msa0959770:CDS | 35.0% | |
| ! | TTTTCCGGATTTCTTATCAG+CGG | - | chr6_3:77204614-77204633 | None:intergenic | 35.0% |
| CAAGAGCTTCTTAGGAAAAA+AGG | + | chr6_3:77202949-77202968 | Msa0959770:CDS | 35.0% | |
| ! | GCTCTTTGAAAATTTCACCT+TGG | - | chr6_3:77203072-77203091 | None:intergenic | 35.0% |
| GTAACAACATTCTCTACTTG+GGG | - | chr6_3:77203130-77203149 | None:intergenic | 35.0% | |
| GGTAACAACATTCTCTACTT+GGG | - | chr6_3:77203131-77203150 | None:intergenic | 35.0% | |
| TGGTAACAACATTCTCTACT+TGG | - | chr6_3:77203132-77203151 | None:intergenic | 35.0% | |
| TCTTTCTTCACAAATTCCTC+AGG | - | chr6_3:77203163-77203182 | None:intergenic | 35.0% | |
| AACGGAGATAGAAATGCAAA+AGG | + | chr6_3:77203183-77203202 | Msa0959770:CDS | 35.0% | |
| AACCGAAGCAAAATAGATCA+AGG | + | chr6_3:77203221-77203240 | Msa0959770:CDS | 35.0% | |
| AAGCAGACAATTGCAACTAT+TGG | + | chr6_3:77203328-77203347 | Msa0959770:intron | 35.0% | |
| CGAAAGTTAAAAGGTTTGTG+AGG | + | chr6_3:77203359-77203378 | Msa0959770:intron | 35.0% | |
| CTGGAAAGCTACATTCTAAA+AGG | + | chr6_3:77203590-77203609 | Msa0959770:intron | 35.0% | |
| CTAAAAGGAAAAACTACAGC+AGG | + | chr6_3:77203605-77203624 | Msa0959770:intron | 35.0% | |
| AAAAGGAAAAACTACAGCAG+GGG | + | chr6_3:77203607-77203626 | Msa0959770:intron | 35.0% | |
| GTCATTTCTTCATGTCAAGT+TGG | + | chr6_3:77203689-77203708 | Msa0959770:intron | 35.0% | |
| TAATGGGAAAAACTACGACA+GGG | - | chr6_3:77203901-77203920 | None:intergenic | 35.0% | |
| ! | ATAATGGGAAAAACTACGAC+AGG | - | chr6_3:77203902-77203921 | None:intergenic | 35.0% |
| TTTAATGCAACCCCTAAGAA+AGG | - | chr6_3:77203953-77203972 | None:intergenic | 35.0% | |
| ! | CAGAACTACAAGCTTTATCA+GGG | + | chr6_3:77204110-77204129 | Msa0959770:intron | 35.0% |
| AAACTGTAATGTTGTGTTGC+CGG | + | chr6_3:77204438-77204457 | Msa0959770:intron | 35.0% | |
| AACAGAAGGTGATCTTGAAA+AGG | + | chr6_3:77204555-77204574 | Msa0959770:CDS | 35.0% | |
| CAAGCATACCTCAGAAAAAA+GGG | + | chr6_3:77204580-77204599 | Msa0959770:CDS | 35.0% | |
| ! | TTTTCCGGATTTCTTATCAG+CGG | - | chr6_3:77204614-77204633 | None:intergenic | 35.0% |
| GCTTCTTAGGAAAAAAGGCT+TGG | + | chr6_3:77202954-77202973 | Msa0959770:CDS | 40.0% | |
| GTTCTTACATTCATGACAGC+AGG | + | chr6_3:77203002-77203021 | Msa0959770:CDS | 40.0% | |
| TACATTCATGACAGCAGGAT+CGG | + | chr6_3:77203007-77203026 | Msa0959770:CDS | 40.0% | |
| !! | AAATTCCTCAGGAGTGTCTT+TGG | - | chr6_3:77203152-77203171 | None:intergenic | 40.0% |
| GGATTGTTGAAGGACAGATA+AGG | + | chr6_3:77203242-77203261 | Msa0959770:CDS | 40.0% | |
| AGGTTTGTGAGGTTCAATCT+CGG | + | chr6_3:77203370-77203389 | Msa0959770:intron | 40.0% | |
| AGGGTTTGGAAAAGAAAACC+AGG | + | chr6_3:77203395-77203414 | Msa0959770:CDS | 40.0% | |
| !!! | CGGTTTTTTTGCAGTTTGTG+CGG | - | chr6_3:77203439-77203458 | None:intergenic | 40.0% |
| CGCACAAACTGCAAAAAAAC+CGG | + | chr6_3:77203437-77203456 | Msa0959770:CDS | 40.0% | |
| TCTTTCACTGGAGTAGTTAC+CGG | - | chr6_3:77203459-77203478 | None:intergenic | 40.0% | |
| ! | TTACTTTGGTTCCATCTCCT+TGG | - | chr6_3:77203508-77203527 | None:intergenic | 40.0% |
| AATGGGAAAAACTACGACAG+GGG | - | chr6_3:77203900-77203919 | None:intergenic | 40.0% | |
| GGTCAACTTTGGCATAACTA+TGG | - | chr6_3:77203932-77203951 | None:intergenic | 40.0% | |
| TGCCAAAGTTGACCTTTCTT+AGG | + | chr6_3:77203938-77203957 | Msa0959770:intron | 40.0% | |
| GCCAAAGTTGACCTTTCTTA+GGG | + | chr6_3:77203939-77203958 | Msa0959770:intron | 40.0% | |
| CCAAAGTTGACCTTTCTTAG+GGG | + | chr6_3:77203940-77203959 | Msa0959770:intron | 40.0% | |
| AATGCAACCCATTGCTCAAA+CGG | - | chr6_3:77203989-77204008 | None:intergenic | 40.0% | |
| CCTGATAAAGCTTGTAGTTC+TGG | - | chr6_3:77204112-77204131 | None:intergenic | 40.0% | |
| ! | CCAGAACTACAAGCTTTATC+AGG | + | chr6_3:77204109-77204128 | Msa0959770:intron | 40.0% |
| ATAAGTATGGAGGGAAGGTT+CGG | - | chr6_3:77204162-77204181 | None:intergenic | 40.0% | |
| !! | TGAAAGCATCGACACAAACA+CGG | + | chr6_3:77204271-77204290 | Msa0959770:intron | 40.0% |
| ACTAAACGTAACCACATGTG+CGG | + | chr6_3:77204356-77204375 | Msa0959770:intron | 40.0% | |
| CTAAGAGAAGAAATAGGTGC+AGG | + | chr6_3:77204502-77204521 | Msa0959770:CDS | 40.0% | |
| AGAAATAGGTGCAGGAATGA+TGG | + | chr6_3:77204510-77204529 | Msa0959770:CDS | 40.0% | |
| AAAGCTCTTGCTGAAACAGA+AGG | + | chr6_3:77204541-77204560 | Msa0959770:CDS | 40.0% | |
| GCAAGCATACCTCAGAAAAA+AGG | + | chr6_3:77204579-77204598 | Msa0959770:CDS | 40.0% | |
| !!! | ATGAGAGACCCTTTTTTCTG+AGG | - | chr6_3:77204591-77204610 | None:intergenic | 40.0% |
| TCATCCGCTGATAAGAAATC+CGG | + | chr6_3:77204607-77204626 | Msa0959770:CDS | 40.0% | |
| GCTTCTTAGGAAAAAAGGCT+TGG | + | chr6_3:77202954-77202973 | Msa0959770:CDS | 40.0% | |
| GTTCTTACATTCATGACAGC+AGG | + | chr6_3:77203002-77203021 | Msa0959770:CDS | 40.0% | |
| TACATTCATGACAGCAGGAT+CGG | + | chr6_3:77203007-77203026 | Msa0959770:CDS | 40.0% | |
| !! | AAATTCCTCAGGAGTGTCTT+TGG | - | chr6_3:77203152-77203171 | None:intergenic | 40.0% |
| GGATTGTTGAAGGACAGATA+AGG | + | chr6_3:77203242-77203261 | Msa0959770:CDS | 40.0% | |
| AGGTTTGTGAGGTTCAATCT+CGG | + | chr6_3:77203370-77203389 | Msa0959770:intron | 40.0% | |
| AGGGTTTGGAAAAGAAAACC+AGG | + | chr6_3:77203395-77203414 | Msa0959770:CDS | 40.0% | |
| !!! | CGGTTTTTTTGCAGTTTGTG+CGG | - | chr6_3:77203439-77203458 | None:intergenic | 40.0% |
| CGCACAAACTGCAAAAAAAC+CGG | + | chr6_3:77203437-77203456 | Msa0959770:CDS | 40.0% | |
| TCTTTCACTGGAGTAGTTAC+CGG | - | chr6_3:77203459-77203478 | None:intergenic | 40.0% | |
| ! | TTACTTTGGTTCCATCTCCT+TGG | - | chr6_3:77203508-77203527 | None:intergenic | 40.0% |
| AATGGGAAAAACTACGACAG+GGG | - | chr6_3:77203900-77203919 | None:intergenic | 40.0% | |
| GGTCAACTTTGGCATAACTA+TGG | - | chr6_3:77203932-77203951 | None:intergenic | 40.0% | |
| TGCCAAAGTTGACCTTTCTT+AGG | + | chr6_3:77203938-77203957 | Msa0959770:intron | 40.0% | |
| GCCAAAGTTGACCTTTCTTA+GGG | + | chr6_3:77203939-77203958 | Msa0959770:intron | 40.0% | |
| CCAAAGTTGACCTTTCTTAG+GGG | + | chr6_3:77203940-77203959 | Msa0959770:intron | 40.0% | |
| AATGCAACCCATTGCTCAAA+CGG | - | chr6_3:77203989-77204008 | None:intergenic | 40.0% | |
| CCTGATAAAGCTTGTAGTTC+TGG | - | chr6_3:77204112-77204131 | None:intergenic | 40.0% | |
| ! | CCAGAACTACAAGCTTTATC+AGG | + | chr6_3:77204109-77204128 | Msa0959770:intron | 40.0% |
| ATAAGTATGGAGGGAAGGTT+CGG | - | chr6_3:77204162-77204181 | None:intergenic | 40.0% | |
| !! | TGAAAGCATCGACACAAACA+CGG | + | chr6_3:77204271-77204290 | Msa0959770:intron | 40.0% |
| ACTAAACGTAACCACATGTG+CGG | + | chr6_3:77204356-77204375 | Msa0959770:intron | 40.0% | |
| CTAAGAGAAGAAATAGGTGC+AGG | + | chr6_3:77204502-77204521 | Msa0959770:CDS | 40.0% | |
| AGAAATAGGTGCAGGAATGA+TGG | + | chr6_3:77204510-77204529 | Msa0959770:CDS | 40.0% | |
| AAAGCTCTTGCTGAAACAGA+AGG | + | chr6_3:77204541-77204560 | Msa0959770:CDS | 40.0% | |
| GCAAGCATACCTCAGAAAAA+AGG | + | chr6_3:77204579-77204598 | Msa0959770:CDS | 40.0% | |
| !!! | ATGAGAGACCCTTTTTTCTG+AGG | - | chr6_3:77204591-77204610 | None:intergenic | 40.0% |
| TCATCCGCTGATAAGAAATC+CGG | + | chr6_3:77204607-77204626 | Msa0959770:CDS | 40.0% | |
| CAGCACTTGTGAAGCAACTT+CGG | + | chr6_3:77202895-77202914 | Msa0959770:CDS | 45.0% | |
| AGCACTTGTGAAGCAACTTC+GGG | + | chr6_3:77202896-77202915 | Msa0959770:CDS | 45.0% | |
| GGACTGTACAAGAGCTTCTT+AGG | + | chr6_3:77202941-77202960 | Msa0959770:CDS | 45.0% | |
| GTGCAGACAAGAAAACAGCT+AGG | + | chr6_3:77202980-77202999 | Msa0959770:CDS | 45.0% | |
| GAGACAGATTTCGTCTTCCA+AGG | + | chr6_3:77203052-77203071 | Msa0959770:CDS | 45.0% | |
| CGATGATATAGCCATGCAAG+TGG | + | chr6_3:77203096-77203115 | Msa0959770:CDS | 45.0% | |
| TGATATAGCCATGCAAGTGG+CGG | + | chr6_3:77203099-77203118 | Msa0959770:CDS | 45.0% | |
| TGTTACCAAAGACACTCCTG+AGG | + | chr6_3:77203144-77203163 | Msa0959770:CDS | 45.0% | |
| GACAGATAAGGAAAGACTCG+AGG | + | chr6_3:77203254-77203273 | Msa0959770:CDS | 45.0% | |
| GGATTTACAGTTGCTTGAGC+AGG | + | chr6_3:77203275-77203294 | Msa0959770:CDS | 45.0% | |
| GGTAACTACTCCAGTGAAAG+AGG | + | chr6_3:77203458-77203477 | Msa0959770:CDS | 45.0% | |
| ! | CGACAGGGGTCTTTAACTTA+AGG | - | chr6_3:77203886-77203905 | None:intergenic | 45.0% |
| CCCCTAAGAAAGGTCAACTT+TGG | - | chr6_3:77203943-77203962 | None:intergenic | 45.0% | |
| TGCTAACCCGTTTGAGCAAT+GGG | + | chr6_3:77203979-77203998 | Msa0959770:intron | 45.0% | |
| ATGCAACCCATTGCTCAAAC+GGG | - | chr6_3:77203988-77204007 | None:intergenic | 45.0% | |
| TAAGTATGGAGGGAAGGTTC+GGG | - | chr6_3:77204161-77204180 | None:intergenic | 45.0% | |
| CTAAACGTAACCACATGTGC+GGG | + | chr6_3:77204357-77204376 | Msa0959770:intron | 45.0% | |
| GTTGTGTTGCCGGAAATCAA+CGG | + | chr6_3:77204448-77204467 | Msa0959770:intron | 45.0% | |
| !! | AGACCACTACCGTTGATTTC+CGG | - | chr6_3:77204460-77204479 | None:intergenic | 45.0% |
| ! | GAAATCAACGGTAGTGGTCT+CGG | + | chr6_3:77204460-77204479 | Msa0959770:intron | 45.0% |
| !!! | TCCTTCAGCTGCTAGTTTTC+CGG | - | chr6_3:77204629-77204648 | None:intergenic | 45.0% |
| CTAGCAGCTGAAGGAAGAAT+TGG | + | chr6_3:77204634-77204653 | Msa0959770:CDS | 45.0% | |
| CAGCACTTGTGAAGCAACTT+CGG | + | chr6_3:77202895-77202914 | Msa0959770:CDS | 45.0% | |
| AGCACTTGTGAAGCAACTTC+GGG | + | chr6_3:77202896-77202915 | Msa0959770:CDS | 45.0% | |
| GGACTGTACAAGAGCTTCTT+AGG | + | chr6_3:77202941-77202960 | Msa0959770:CDS | 45.0% | |
| GTGCAGACAAGAAAACAGCT+AGG | + | chr6_3:77202980-77202999 | Msa0959770:CDS | 45.0% | |
| GAGACAGATTTCGTCTTCCA+AGG | + | chr6_3:77203052-77203071 | Msa0959770:CDS | 45.0% | |
| CGATGATATAGCCATGCAAG+TGG | + | chr6_3:77203096-77203115 | Msa0959770:CDS | 45.0% | |
| TGATATAGCCATGCAAGTGG+CGG | + | chr6_3:77203099-77203118 | Msa0959770:CDS | 45.0% | |
| TGTTACCAAAGACACTCCTG+AGG | + | chr6_3:77203144-77203163 | Msa0959770:CDS | 45.0% | |
| GACAGATAAGGAAAGACTCG+AGG | + | chr6_3:77203254-77203273 | Msa0959770:CDS | 45.0% | |
| GGATTTACAGTTGCTTGAGC+AGG | + | chr6_3:77203275-77203294 | Msa0959770:CDS | 45.0% | |
| GGTAACTACTCCAGTGAAAG+AGG | + | chr6_3:77203458-77203477 | Msa0959770:CDS | 45.0% | |
| ! | CGACAGGGGTCTTTAACTTA+AGG | - | chr6_3:77203886-77203905 | None:intergenic | 45.0% |
| CCCCTAAGAAAGGTCAACTT+TGG | - | chr6_3:77203943-77203962 | None:intergenic | 45.0% | |
| TGCTAACCCGTTTGAGCAAT+GGG | + | chr6_3:77203979-77203998 | Msa0959770:intron | 45.0% | |
| ATGCAACCCATTGCTCAAAC+GGG | - | chr6_3:77203988-77204007 | None:intergenic | 45.0% | |
| TAAGTATGGAGGGAAGGTTC+GGG | - | chr6_3:77204161-77204180 | None:intergenic | 45.0% | |
| CTAAACGTAACCACATGTGC+GGG | + | chr6_3:77204357-77204376 | Msa0959770:intron | 45.0% | |
| GTTGTGTTGCCGGAAATCAA+CGG | + | chr6_3:77204448-77204467 | Msa0959770:intron | 45.0% | |
| !! | AGACCACTACCGTTGATTTC+CGG | - | chr6_3:77204460-77204479 | None:intergenic | 45.0% |
| ! | GAAATCAACGGTAGTGGTCT+CGG | + | chr6_3:77204460-77204479 | Msa0959770:intron | 45.0% |
| !!! | TCCTTCAGCTGCTAGTTTTC+CGG | - | chr6_3:77204629-77204648 | None:intergenic | 45.0% |
| CTAGCAGCTGAAGGAAGAAT+TGG | + | chr6_3:77204634-77204653 | Msa0959770:CDS | 45.0% | |
| CGAAGTTGCTTCACAAGTGC+TGG | - | chr6_3:77202897-77202916 | None:intergenic | 50.0% | |
| AAGCAACTTCGGGACGAAAC+AGG | + | chr6_3:77202906-77202925 | Msa0959770:CDS | 50.0% | |
| CGAAACAGGAGCTGGAATGA+TGG | + | chr6_3:77202920-77202939 | Msa0959770:CDS | 50.0% | |
| TGTGAGGTTCAATCTCGGAG+AGG | + | chr6_3:77203375-77203394 | Msa0959770:CDS | 50.0% | |
| GTGAGGTTCAATCTCGGAGA+GGG | + | chr6_3:77203376-77203395 | Msa0959770:CDS | 50.0% | |
| GTTCAATCTCGGAGAGGGTT+TGG | + | chr6_3:77203381-77203400 | Msa0959770:CDS | 50.0% | |
| CGACTTCAGCAGCAAAATCC+TGG | - | chr6_3:77203416-77203435 | None:intergenic | 50.0% | |
| GTGCTAACCCGTTTGAGCAA+TGG | + | chr6_3:77203978-77203997 | Msa0959770:intron | 50.0% | |
| ACAACTAACACCCGCACATG+TGG | - | chr6_3:77204370-77204389 | None:intergenic | 50.0% | |
| TTGCCGGAAATCAACGGTAG+TGG | + | chr6_3:77204454-77204473 | Msa0959770:intron | 50.0% | |
| ! | TAGTGGTCTCGGCCTCTTTT+TGG | + | chr6_3:77204471-77204490 | Msa0959770:intron | 50.0% |
| TCCGGAAAACTAGCAGCTGA+AGG | + | chr6_3:77204625-77204644 | Msa0959770:CDS | 50.0% | |
| CGAAGTTGCTTCACAAGTGC+TGG | - | chr6_3:77202897-77202916 | None:intergenic | 50.0% | |
| AAGCAACTTCGGGACGAAAC+AGG | + | chr6_3:77202906-77202925 | Msa0959770:CDS | 50.0% | |
| CGAAACAGGAGCTGGAATGA+TGG | + | chr6_3:77202920-77202939 | Msa0959770:CDS | 50.0% | |
| TGTGAGGTTCAATCTCGGAG+AGG | + | chr6_3:77203375-77203394 | Msa0959770:CDS | 50.0% | |
| GTGAGGTTCAATCTCGGAGA+GGG | + | chr6_3:77203376-77203395 | Msa0959770:CDS | 50.0% | |
| GTTCAATCTCGGAGAGGGTT+TGG | + | chr6_3:77203381-77203400 | Msa0959770:CDS | 50.0% | |
| CGACTTCAGCAGCAAAATCC+TGG | - | chr6_3:77203416-77203435 | None:intergenic | 50.0% | |
| GTGCTAACCCGTTTGAGCAA+TGG | + | chr6_3:77203978-77203997 | Msa0959770:intron | 50.0% | |
| ACAACTAACACCCGCACATG+TGG | - | chr6_3:77204370-77204389 | None:intergenic | 50.0% | |
| TTGCCGGAAATCAACGGTAG+TGG | + | chr6_3:77204454-77204473 | Msa0959770:intron | 50.0% | |
| ! | TAGTGGTCTCGGCCTCTTTT+TGG | + | chr6_3:77204471-77204490 | Msa0959770:intron | 50.0% |
| TCCGGAAAACTAGCAGCTGA+AGG | + | chr6_3:77204625-77204644 | Msa0959770:CDS | 50.0% | |
| TGCTGCAGAAGCCAAGGAGA+TGG | + | chr6_3:77203494-77203513 | Msa0959770:CDS | 55.0% | |
| TGCTGCAGAAGCCAAGGAGA+TGG | + | chr6_3:77203494-77203513 | Msa0959770:CDS | 55.0% | |
| CTTCGGGACGAAACAGGAGC+TGG | + | chr6_3:77202912-77202931 | Msa0959770:CDS | 60.0% | |
| GCAGCAGGCTCCTCTTTCAC+TGG | - | chr6_3:77203471-77203490 | None:intergenic | 60.0% | |
| TGCTGCTGCTGCAGAAGCCA+AGG | + | chr6_3:77203488-77203507 | Msa0959770:CDS | 60.0% | |
| CTTCGGGACGAAACAGGAGC+TGG | + | chr6_3:77202912-77202931 | Msa0959770:CDS | 60.0% | |
| GCAGCAGGCTCCTCTTTCAC+TGG | - | chr6_3:77203471-77203490 | None:intergenic | 60.0% | |
| TGCTGCTGCTGCAGAAGCCA+AGG | + | chr6_3:77203488-77203507 | Msa0959770:CDS | 60.0% | |
| GGGACATGCCGCCACTTGCA+TGG | - | chr6_3:77203110-77203129 | None:intergenic | 65.0% | |
| GCTTCTGCAGCAGCAGCAGC+AGG | - | chr6_3:77203486-77203505 | None:intergenic | 65.0% | |
| GGGACATGCCGCCACTTGCA+TGG | - | chr6_3:77203110-77203129 | None:intergenic | 65.0% | |
| GCTTCTGCAGCAGCAGCAGC+AGG | - | chr6_3:77203486-77203505 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 77202872 | 77204696 | 77202872 | ID=Msa0959770;Name=Msa0959770 |
| chr6_3 | mRNA | 77202872 | 77204696 | 77202872 | ID=Msa0959770-mRNA-1;Parent=Msa0959770;Name=Msa0959770-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0|0|1|1|1|3|0|270 |
| chr6_3 | exon | 77202872 | 77203306 | 77202872 | ID=Msa0959770-mRNA-1:exon:13854;Parent=Msa0959770-mRNA-1 |
| chr6_3 | exon | 77203372 | 77203523 | 77203372 | ID=Msa0959770-mRNA-1:exon:13855;Parent=Msa0959770-mRNA-1 |
| chr6_3 | exon | 77204474 | 77204696 | 77204474 | ID=Msa0959770-mRNA-1:exon:13856;Parent=Msa0959770-mRNA-1 |
| chr6_3 | CDS | 77202872 | 77203306 | 77202872 | ID=Msa0959770-mRNA-1:cds;Parent=Msa0959770-mRNA-1 |
| chr6_3 | CDS | 77203372 | 77203523 | 77203372 | ID=Msa0959770-mRNA-1:cds;Parent=Msa0959770-mRNA-1 |
| chr6_3 | CDS | 77204474 | 77204696 | 77204474 | ID=Msa0959770-mRNA-1:cds;Parent=Msa0959770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
