Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980310 | XP_013451521.2 | 96.040 | 404 | 16 | 0 | 1 | 404 | 1 | 404 | 0.0 | 808 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980310 | sp|Q9LFQ0|GT14B_ARATH | 55.429 | 350 | 152 | 2 | 56 | 404 | 88 | 434 | 1.50e-144 | 421 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980310 | A0A396HBP4 | 96.040 | 404 | 16 | 0 | 1 | 404 | 1 | 404 | 0.0 | 808 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa0980310 | 0.852103 | 5.749957e-61 | -8.615850e-47 |
| Msa0052730 | Msa0980310 | 0.806627 | 7.503302e-50 | -8.615850e-47 |
| Msa0110970 | Msa0980310 | 0.811402 | 7.129186e-51 | -8.615850e-47 |
| Msa0657970 | Msa0980310 | 0.809684 | 1.675090e-50 | -8.615850e-47 |
| Msa0669320 | Msa0980310 | 0.801493 | 8.772283e-49 | -8.615850e-47 |
| Msa0764830 | Msa0980310 | 0.802501 | 5.444302e-49 | -8.615850e-47 |
| Msa0828560 | Msa0980310 | 0.803570 | 3.272631e-49 | -8.615850e-47 |
| Msa0152430 | Msa0980310 | 0.810521 | 1.106303e-50 | -8.615850e-47 |
| Msa0157290 | Msa0980310 | 0.852308 | 5.027322e-61 | -8.615850e-47 |
| Msa0200260 | Msa0980310 | 0.813527 | 2.446684e-51 | -8.615850e-47 |
| Msa0376350 | Msa0980310 | 0.818486 | 1.911870e-52 | -8.615850e-47 |
| Msa0410650 | Msa0980310 | 0.818247 | 2.165045e-52 | -8.615850e-47 |
| Msa0424790 | Msa0980310 | 0.816019 | 6.861434e-52 | -8.615850e-47 |
| Msa0440750 | Msa0980310 | 0.821310 | 4.320773e-53 | -8.615850e-47 |
| Msa0980310 | Msa1019000 | 0.823091 | 1.669202e-53 | -8.615850e-47 |
| Msa0980310 | Msa1081330 | 0.805229 | 1.476237e-49 | -8.615850e-47 |
| Msa0980310 | Msa1082500 | 0.823757 | 1.166594e-53 | -8.615850e-47 |
| Msa0980310 | Msa1085200 | 0.821740 | 3.437700e-53 | -8.615850e-47 |
| Msa0980310 | Msa1151910 | 0.828440 | 8.982561e-55 | -8.615850e-47 |
| Msa0980310 | Msa1173100 | 0.807540 | 4.808922e-50 | -8.615850e-47 |
| Msa0980310 | Msa1186060 | 0.810463 | 1.138235e-50 | -8.615850e-47 |
| Msa0980310 | Msa1192090 | 0.804648 | 1.952547e-49 | -8.615850e-47 |
| Msa0980310 | Msa1269480 | 0.803543 | 3.316348e-49 | -8.615850e-47 |
| Msa0980310 | Msa1278840 | 0.800085 | 1.700384e-48 | -8.615850e-47 |
| Msa0980310 | Msa1283860 | 0.800765 | 1.235901e-48 | -8.615850e-47 |
| Msa0980310 | Msa1322890 | 0.804843 | 1.778252e-49 | -8.615850e-47 |
| Msa0980310 | Msa1324500 | 0.824445 | 8.042763e-54 | -8.615850e-47 |
| Msa0980310 | Msa1327680 | 0.810389 | 1.181295e-50 | -8.615850e-47 |
| Msa0980310 | Msa1353470 | 0.802160 | 6.398924e-49 | -8.615850e-47 |
| Msa0980310 | Msa1360060 | 0.811102 | 8.281934e-51 | -8.615850e-47 |
| Msa0980310 | Msa1367370 | 0.801573 | 8.446446e-49 | -8.615850e-47 |
| Msa0980310 | Msa1372760 | 0.815248 | 1.019022e-51 | -8.615850e-47 |
| Msa0980310 | Msa1374550 | 0.803809 | 2.920097e-49 | -8.615850e-47 |
| Msa0980310 | Msa1392260 | 0.805503 | 1.293435e-49 | -8.615850e-47 |
| Msa0980310 | Msa1409870 | 0.819237 | 1.290684e-52 | -8.615850e-47 |
| Msa0980310 | Msa1429900 | 0.805286 | 1.436160e-49 | -8.615850e-47 |
| Msa0980310 | Msa1443110 | 0.802076 | 6.661108e-49 | -8.615850e-47 |
| Msa0980310 | Msa1460020 | 0.811837 | 5.732349e-51 | -8.615850e-47 |
| Msa0243100 | Msa0980310 | 0.822400 | 2.417291e-53 | -8.615850e-47 |
| Msa0244860 | Msa0980310 | 0.803128 | 4.041987e-49 | -8.615850e-47 |
| Msa0264040 | Msa0980310 | 0.810358 | 1.199152e-50 | -8.615850e-47 |
| Msa0283450 | Msa0980310 | 0.818583 | 1.817059e-52 | -8.615850e-47 |
| Msa0287650 | Msa0980310 | 0.823857 | 1.105175e-53 | -8.615850e-47 |
| Msa0302000 | Msa0980310 | 0.805813 | 1.113597e-49 | -8.615850e-47 |
| Msa0322690 | Msa0980310 | 0.819511 | 1.117786e-52 | -8.615850e-47 |
| Msa0345970 | Msa0980310 | 0.810525 | 1.104084e-50 | -8.615850e-47 |
| Msa0357340 | Msa0980310 | 0.806626 | 7.508399e-50 | -8.615850e-47 |
| Msa0488560 | Msa0980310 | 0.821794 | 3.341434e-53 | -8.615850e-47 |
| Msa0507680 | Msa0980310 | 0.824722 | 6.919305e-54 | -8.615850e-47 |
| Msa0516170 | Msa0980310 | 0.809713 | 1.651661e-50 | -8.615850e-47 |
| Msa0524190 | Msa0980310 | 0.802736 | 4.868704e-49 | -8.615850e-47 |
| Msa0545210 | Msa0980310 | 0.801419 | 9.083503e-49 | -8.615850e-47 |
| Msa0546680 | Msa0980310 | 0.803339 | 3.654686e-49 | -8.615850e-47 |
| Msa0574890 | Msa0980310 | 0.808112 | 3.633579e-50 | -8.615850e-47 |
| Msa0601750 | Msa0980310 | 0.805582 | 1.245381e-49 | -8.615850e-47 |
| Msa0844570 | Msa0980310 | 0.812660 | 3.790340e-51 | -8.615850e-47 |
| Msa0878290 | Msa0980310 | 0.813419 | 2.584881e-51 | -8.615850e-47 |
| Msa0880140 | Msa0980310 | 0.847039 | 1.487552e-59 | -8.615850e-47 |
| Msa0909120 | Msa0980310 | 0.813373 | 2.644653e-51 | -8.615850e-47 |
| Msa0909140 | Msa0980310 | 0.804238 | 2.377834e-49 | -8.615850e-47 |
| Msa0944030 | Msa0980310 | 0.888123 | 7.804346e-73 | -8.615850e-47 |
| Msa0954920 | Msa0980310 | 0.803997 | 2.668918e-49 | -8.615850e-47 |
| Msa0969450 | Msa0980310 | 0.800631 | 1.316343e-48 | -8.615850e-47 |
| Msa0969520 | Msa0980310 | 0.806235 | 9.076441e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980310 | MtrunA17_Chr6g0460801 | 96.040 | 404 | 16 | 0 | 1 | 404 | 1 | 404 | 0.0 | 808 |
| Msa0980310 | MtrunA17_Chr7g0254121 | 71.675 | 406 | 106 | 4 | 1 | 404 | 1 | 399 | 0.0 | 596 |
| Msa0980310 | MtrunA17_Chr6g0452631 | 49.510 | 408 | 187 | 6 | 8 | 403 | 32 | 432 | 1.77e-142 | 412 |
| Msa0980310 | MtrunA17_Chr4g0022501 | 53.279 | 366 | 165 | 6 | 39 | 403 | 72 | 432 | 2.79e-139 | 404 |
| Msa0980310 | MtrunA17_Chr4g0010141 | 51.567 | 351 | 164 | 3 | 56 | 404 | 73 | 419 | 1.52e-135 | 394 |
| Msa0980310 | MtrunA17_Chr2g0317441 | 51.714 | 350 | 160 | 3 | 56 | 404 | 83 | 424 | 1.18e-132 | 387 |
| Msa0980310 | MtrunA17_Chr4g0063621 | 50.144 | 347 | 139 | 2 | 57 | 403 | 76 | 388 | 4.99e-123 | 361 |
| Msa0980310 | MtrunA17_Chr1g0208381 | 44.972 | 358 | 186 | 4 | 52 | 404 | 46 | 397 | 6.45e-108 | 323 |
| Msa0980310 | MtrunA17_Chr1g0169461 | 44.886 | 352 | 187 | 3 | 53 | 403 | 93 | 438 | 3.62e-104 | 315 |
| Msa0980310 | MtrunA17_Chr4g0002191 | 36.908 | 401 | 243 | 5 | 11 | 404 | 10 | 407 | 8.88e-86 | 267 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980310 | AT3G03690.1 | 67.183 | 323 | 102 | 2 | 22 | 344 | 24 | 342 | 5.97e-161 | 457 |
| Msa0980310 | AT5G15050.1 | 55.429 | 350 | 152 | 2 | 56 | 404 | 88 | 434 | 1.53e-145 | 421 |
| Msa0980310 | AT4G27480.2 | 54.571 | 350 | 150 | 3 | 56 | 404 | 80 | 421 | 1.09e-143 | 415 |
| Msa0980310 | AT4G27480.3 | 54.571 | 350 | 150 | 3 | 56 | 404 | 80 | 421 | 1.09e-143 | 415 |
| Msa0980310 | AT4G27480.1 | 54.571 | 350 | 150 | 3 | 56 | 404 | 80 | 421 | 1.09e-143 | 415 |
| Msa0980310 | AT5G39990.1 | 53.824 | 353 | 159 | 2 | 53 | 404 | 98 | 447 | 8.95e-143 | 414 |
| Msa0980310 | AT3G15350.2 | 53.693 | 352 | 152 | 4 | 56 | 404 | 81 | 424 | 1.64e-140 | 407 |
| Msa0980310 | AT3G15350.1 | 53.693 | 352 | 152 | 4 | 56 | 404 | 81 | 424 | 1.64e-140 | 407 |
| Msa0980310 | AT1G03520.2 | 52.861 | 367 | 161 | 6 | 39 | 403 | 1 | 357 | 5.82e-138 | 399 |
| Msa0980310 | AT1G03520.1 | 52.575 | 369 | 163 | 6 | 37 | 403 | 88 | 446 | 4.56e-137 | 399 |
| Msa0980310 | AT1G53100.1 | 48.655 | 409 | 186 | 8 | 8 | 403 | 25 | 422 | 2.24e-134 | 392 |
| Msa0980310 | AT4G03340.1 | 51.499 | 367 | 169 | 6 | 39 | 403 | 88 | 447 | 6.76e-134 | 391 |
| Msa0980310 | AT1G53100.2 | 49.123 | 399 | 179 | 8 | 8 | 393 | 25 | 412 | 3.04e-131 | 384 |
| Msa0980310 | AT2G37585.1 | 48.000 | 350 | 157 | 5 | 56 | 404 | 59 | 384 | 3.25e-119 | 352 |
| Msa0980310 | AT4G03340.2 | 47.956 | 367 | 159 | 7 | 39 | 403 | 88 | 424 | 9.19e-118 | 349 |
| Msa0980310 | AT1G71070.1 | 44.068 | 354 | 194 | 2 | 52 | 404 | 45 | 395 | 5.27e-110 | 328 |
| Msa0980310 | AT3G24040.1 | 41.477 | 352 | 202 | 3 | 53 | 403 | 66 | 414 | 6.98e-97 | 296 |
| Msa0980310 | AT3G03690.2 | 58.427 | 178 | 70 | 2 | 22 | 199 | 24 | 197 | 4.23e-67 | 212 |
Find 80 sgRNAs with CRISPR-Local
Find 506 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCACAATCATCTCTAAAA+TGG | 0.202291 | 6_4:-18331740 | Msa0980310:exon |
| TAAGGTTGGTATGGTTAATT+TGG | 0.206710 | 6_4:+18331651 | None:intergenic |
| TTCTTCTTAGGAGTTGTAAA+TGG | 0.207307 | 6_4:-18331297 | Msa0980310:CDS |
| ATTAAATATGCAAAACTAAT+TGG | 0.222896 | 6_4:+18331565 | None:intergenic |
| GCCAAATATCTGATTTCTTT+TGG | 0.224723 | 6_4:+18330510 | None:intergenic |
| GCCAAAAGAAATCAGATATT+TGG | 0.232766 | 6_4:-18330511 | Msa0980310:CDS |
| ATGCTATGGCAATTCTTCTT+AGG | 0.239237 | 6_4:-18331309 | Msa0980310:CDS |
| ACTCAAAGATTATAGGAAAA+TGG | 0.261335 | 6_4:-18326036 | Msa0980310:CDS |
| GATTGTGAAGAAATTAAGTT+TGG | 0.263708 | 6_4:+18331753 | None:intergenic |
| ACATCTCTATGATCTTTCTT+TGG | 0.304538 | 6_4:+18331445 | None:intergenic |
| AAGGTTGTGTTCATTGGTTT+TGG | 0.309897 | 6_4:+18331616 | None:intergenic |
| TCTTTGAGTGTTAGAGATCT+TGG | 0.314388 | 6_4:+18326050 | None:intergenic |
| CATTCACCATAGCAGTCATT+TGG | 0.315591 | 6_4:-18331049 | Msa0980310:CDS |
| AAATTATTATTTGATTCATA+TGG | 0.318689 | 6_4:-18331479 | Msa0980310:CDS |
| CTCTAACACTCAAAGATTAT+AGG | 0.319984 | 6_4:-18326043 | Msa0980310:CDS |
| AGAGATCTTGGATGTTGTTT+TGG | 0.322287 | 6_4:+18326062 | None:intergenic |
| TTCTTAAACTTTCTAGCAAA+TGG | 0.368091 | 6_4:+18325999 | None:intergenic |
| GTGGTTAAATGCTTTGATAA+AGG | 0.368181 | 6_4:+18331834 | None:intergenic |
| ACTGTTTGGAAATACCCTTC+TGG | 0.369138 | 6_4:+18326158 | None:intergenic |
| TGGTTAAATGCTTTGATAAA+GGG | 0.377848 | 6_4:+18331835 | None:intergenic |
| GGTTTGAAAATTGAGAATTA+TGG | 0.380635 | 6_4:-18325858 | Msa0980310:CDS |
| TAGAATTGCATATAACTGTT+TGG | 0.386470 | 6_4:+18326144 | None:intergenic |
| TTTCTGAGTATTGTATTCTT+GGG | 0.387883 | 6_4:-18326235 | Msa0980310:CDS |
| ATTCACCATAGCAGTCATTT+GGG | 0.401509 | 6_4:-18331048 | Msa0980310:CDS |
| TGAATCAAATAATAATTTCC+TGG | 0.403261 | 6_4:+18331484 | None:intergenic |
| TTGGTCAAGTAGGAAATGTT+TGG | 0.403827 | 6_4:-18331393 | Msa0980310:CDS |
| AATTTAGTCATATGATATAA+TGG | 0.406345 | 6_4:-18325700 | Msa0980310:three_prime_UTR |
| ATGATCTACACTACATTACT+TGG | 0.419908 | 6_4:-18326094 | Msa0980310:CDS |
| TAGTGCATCTGATTATCCTT+TGG | 0.430100 | 6_4:-18331257 | Msa0980310:CDS |
| ATGTTGAAGGTTGTGTTCAT+TGG | 0.435000 | 6_4:+18331610 | None:intergenic |
| TGAATGAAATTCATATGCTT+TGG | 0.436558 | 6_4:+18331066 | None:intergenic |
| TATTTGATTCATATGGATCA+TGG | 0.436582 | 6_4:-18331472 | Msa0980310:CDS |
| GAAAATCAAAAGGTTGTTGA+AGG | 0.437111 | 6_4:-18331518 | Msa0980310:CDS |
| CTGAGTATTGTATTCTTGGG+TGG | 0.442957 | 6_4:-18326232 | Msa0980310:CDS |
| TGGTGTTCTTAAGCCAAGTC+TGG | 0.446844 | 6_4:-18325838 | Msa0980310:CDS |
| ACCATAGCAGTCATTTGGGT+TGG | 0.447311 | 6_4:-18331044 | Msa0980310:CDS |
| GAAGAAATTAAGTTTGGGAA+TGG | 0.455308 | 6_4:+18331759 | None:intergenic |
| TTAGGAGTTGTAAATGGGAT+TGG | 0.455353 | 6_4:-18331291 | Msa0980310:CDS |
| TATCCTTTGGTTACACAAGA+TGG | 0.455593 | 6_4:-18331244 | Msa0980310:intron |
| AGTTGAAGAGTGAATATAAT+GGG | 0.456469 | 6_4:+18331862 | None:intergenic |
| TATTTAATTTCAGGTTCAAA+AGG | 0.470731 | 6_4:-18331550 | Msa0980310:CDS |
| GTTGGTATTGGAGATGTTGA+AGG | 0.471056 | 6_4:+18331597 | None:intergenic |
| ACACAAAATTTGTGTAGTAT+AGG | 0.472913 | 6_4:+18326186 | None:intergenic |
| TCTTCTTAGGAGTTGTAAAT+GGG | 0.473649 | 6_4:-18331296 | Msa0980310:CDS |
| ATTGTGAAGAAATTAAGTTT+GGG | 0.473998 | 6_4:+18331754 | None:intergenic |
| TGAGTATTGTATTCTTGGGT+GGG | 0.475364 | 6_4:-18326231 | Msa0980310:CDS |
| TTGAAGGCTTTGTACCATCC+AGG | 0.476164 | 6_4:-18331502 | Msa0980310:CDS |
| AAGAAATTAAGTTTGGGAAT+GGG | 0.481976 | 6_4:+18331760 | None:intergenic |
| TATATAGTTTAAAAGCTGTT+GGG | 0.491319 | 6_4:+18330465 | None:intergenic |
| TTCTACAACTCTTCATGCTA+TGG | 0.494826 | 6_4:-18331323 | Msa0980310:CDS |
| GGTTGGTATGGTTAATTTGG+TGG | 0.495276 | 6_4:+18331654 | None:intergenic |
| GTTGGTATGGTTAATTTGGT+GGG | 0.500215 | 6_4:+18331655 | None:intergenic |
| CAATGTTGAGGTAAGGATAG+AGG | 0.500511 | 6_4:+18331696 | None:intergenic |
| GTATATAGTTTAAAAGCTGT+TGG | 0.503019 | 6_4:+18330464 | None:intergenic |
| TAGTTGAAGAGTGAATATAA+TGG | 0.504566 | 6_4:+18331861 | None:intergenic |
| ATGCTTTGGAATTCCAGAAA+AGG | 0.506923 | 6_4:+18331080 | None:intergenic |
| CTATGCTTTCCACCTTGTGA+TGG | 0.509851 | 6_4:+18325891 | None:intergenic |
| TCAAATAATAATTTCCTGGA+TGG | 0.514443 | 6_4:+18331488 | None:intergenic |
| AGAGTTGTAGAAAGCATAGT+TGG | 0.528565 | 6_4:+18331334 | None:intergenic |
| CAAAATTTGTGTAGTATAGG+AGG | 0.535652 | 6_4:+18326189 | None:intergenic |
| AGTAAAGAGTAATCAAGAAG+TGG | 0.535949 | 6_4:+18331815 | None:intergenic |
| GAGATGCTATGAAAATCAAA+AGG | 0.539134 | 6_4:-18331528 | Msa0980310:CDS |
| CAAAGAACAATGTTGAGGTA+AGG | 0.540779 | 6_4:+18331689 | None:intergenic |
| TAGTATAGGAGGAGGATCCT+TGG | 0.550571 | 6_4:+18326200 | None:intergenic |
| TTGGAATTCCAGAAAAGGCA+TGG | 0.553652 | 6_4:+18331085 | None:intergenic |
| AAAGAAATCAGATATTTGGC+AGG | 0.557557 | 6_4:-18330507 | Msa0980310:CDS |
| TAAACTTTCTAGCAAATGGA+CGG | 0.567234 | 6_4:+18326003 | None:intergenic |
| TGATCTACACTACATTACTT+GGG | 0.594137 | 6_4:-18326093 | Msa0980310:CDS |
| TCCAACCCAAATGACTGCTA+TGG | 0.598350 | 6_4:+18331043 | None:intergenic |
| AATTTGTGTAGTATAGGAGG+AGG | 0.604508 | 6_4:+18326192 | None:intergenic |
| GTGTAGATCATTGTTAGCTG+TGG | 0.612568 | 6_4:+18326106 | None:intergenic |
| ATTTACGCAAACAACAATGT+CGG | 0.619006 | 6_4:-18325767 | Msa0980310:CDS |
| AAGAACAAAGAACAATGTTG+AGG | 0.619282 | 6_4:+18331684 | None:intergenic |
| TTTGGCAGGTAACTAAGCAA+AGG | 0.625832 | 6_4:-18330493 | Msa0980310:CDS |
| AAAATCATTGACACATGGAG+AGG | 0.652824 | 6_4:-18331946 | Msa0980310:five_prime_UTR |
| TTGGGTGGGAAAATTTACCA+AGG | 0.657816 | 6_4:-18326217 | Msa0980310:CDS |
| GGAAAGCATAGAGCATGTCA+TGG | 0.659761 | 6_4:-18325879 | Msa0980310:CDS |
| ATACCATCTTGTGTAACCAA+AGG | 0.660551 | 6_4:+18331241 | None:intergenic |
| TGGTGTTCATCACCATCACA+AGG | 0.691054 | 6_4:-18325903 | Msa0980310:CDS |
| TGTTCATCACCATCACAAGG+TGG | 0.742385 | 6_4:-18325900 | Msa0980310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATTATTTGATTCATA+TGG | - | chr6_4:18326162-18326181 | Msa0980310:CDS | 10.0% |
| !! | AAATGATTCAAAAAATAAAA+TGG | + | chr6_4:18326454-18326473 | None:intergenic | 10.0% |
| !!! | ATTAATAAACTTTTAGTATA+GGG | + | chr6_4:18326960-18326979 | None:intergenic | 10.0% |
| !!! | AATTAATAAACTTTTAGTAT+AGG | + | chr6_4:18326961-18326980 | None:intergenic | 10.0% |
| !!! | ATTAGAATTTTTAAGTAAAA+TGG | + | chr6_4:18327046-18327065 | None:intergenic | 10.0% |
| !! | AAGTATATAATCATAAATTA+TGG | + | chr6_4:18327454-18327473 | None:intergenic | 10.0% |
| !!! | CTCAAATTTTATTAAAAAAA+TGG | - | chr6_4:18327995-18328014 | Msa0980310:intron | 10.0% |
| !!! | CAAATTTTATTAAAAAAATG+GGG | - | chr6_4:18327997-18328016 | Msa0980310:intron | 10.0% |
| !! | ATTAAATATGCAAAACTAAT+TGG | + | chr6_4:18326079-18326098 | None:intergenic | 15.0% |
| !!! | AGTAATTTTGTTACATATAA+AGG | - | chr6_4:18326283-18326302 | Msa0980310:intron | 15.0% |
| !! | TTATAAAATATTTAGCCTAT+TGG | - | chr6_4:18326785-18326804 | Msa0980310:intron | 15.0% |
| !!! | TTAATAAACTTTTAGTATAG+GGG | + | chr6_4:18326959-18326978 | None:intergenic | 15.0% |
| !! | GAAAAAAATTAAAGTTGTAT+TGG | + | chr6_4:18327546-18327565 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTGGATAAAC+CGG | - | chr6_4:18327890-18327909 | Msa0980310:intron | 15.0% |
| !!! | TTTTTAATAAAATTTGAGTG+TGG | + | chr6_4:18327993-18328012 | None:intergenic | 15.0% |
| !! | AAAAAATATATACACAAAGA+GGG | - | chr6_4:18328020-18328039 | Msa0980310:intron | 15.0% |
| !!! | ATTTAGCTTATGATTTTTTT+CGG | + | chr6_4:18328131-18328150 | None:intergenic | 15.0% |
| !! | TTCATACTCTTTATATTATT+TGG | + | chr6_4:18328773-18328792 | None:intergenic | 15.0% |
| !!! | ATAAAAAATTTTATTTGGAG+CGG | + | chr6_4:18329695-18329714 | None:intergenic | 15.0% |
| !!! | CTTGGATAAAAAATTTTATT+TGG | + | chr6_4:18329700-18329719 | None:intergenic | 15.0% |
| !!! | TTATTTCTATTCAAAAATCT+AGG | - | chr6_4:18331354-18331373 | Msa0980310:CDS | 15.0% |
| !! | AATTTAGTCATATGATATAA+TGG | - | chr6_4:18331941-18331960 | Msa0980310:five_prime_UTR | 15.0% |
| !! | ATTGTGAAGAAATTAAGTTT+GGG | + | chr6_4:18325890-18325909 | None:intergenic | 20.0% |
| !!! | ACTAATTGGATATTTTTTGT+TGG | + | chr6_4:18326065-18326084 | None:intergenic | 20.0% |
| !!! | AGTTTTGCATATTTAATTTC+AGG | - | chr6_4:18326082-18326101 | Msa0980310:CDS | 20.0% |
| !!! | TATTTAATTTCAGGTTCAAA+AGG | - | chr6_4:18326091-18326110 | Msa0980310:CDS | 20.0% |
| !! | TGAATCAAATAATAATTTCC+TGG | + | chr6_4:18326160-18326179 | None:intergenic | 20.0% |
| !! | TATATAGTTTAAAAGCTGTT+GGG | + | chr6_4:18327179-18327198 | None:intergenic | 20.0% |
| !! | ATACTATAGAACAAATCTAA+AGG | + | chr6_4:18327229-18327248 | None:intergenic | 20.0% |
| !!! | AAGTGACATTCATTTTAAAA+CGG | + | chr6_4:18327480-18327499 | None:intergenic | 20.0% |
| !! | AAAATTATTAAGGGTAAAGT+TGG | + | chr6_4:18327571-18327590 | None:intergenic | 20.0% |
| !!! | GTTTTTTTCTTATAAAGTAG+AGG | - | chr6_4:18327624-18327643 | Msa0980310:intron | 20.0% |
| !!! | TAAGTTCTCTAAAATAGTTT+AGG | - | chr6_4:18327809-18327828 | Msa0980310:intron | 20.0% |
| !!! | TTTTTTTTTTTGGATAAACC+GGG | - | chr6_4:18327891-18327910 | Msa0980310:intron | 20.0% |
| !! | GAAAAAATATATACACAAAG+AGG | - | chr6_4:18328019-18328038 | Msa0980310:intron | 20.0% |
| !! | AAAAATATATACACAAAGAG+GGG | - | chr6_4:18328021-18328040 | Msa0980310:intron | 20.0% |
| !!! | TAGCTTTTATTTGTTTGTTT+CGG | + | chr6_4:18328065-18328084 | None:intergenic | 20.0% |
| !!! | TTTAGCTTATGATTTTTTTC+GGG | + | chr6_4:18328130-18328149 | None:intergenic | 20.0% |
| !! | AAAAAATCATAAGCTAAATC+AGG | - | chr6_4:18328132-18328151 | Msa0980310:intron | 20.0% |
| !!! | AGATCAAATATTTTCGAAAT+GGG | + | chr6_4:18329505-18329524 | None:intergenic | 20.0% |
| !!! | AAGATCAAATATTTTCGAAA+TGG | + | chr6_4:18329506-18329525 | None:intergenic | 20.0% |
| !! | TGAATCTTTAATGTTGAAAT+TGG | + | chr6_4:18329573-18329592 | None:intergenic | 20.0% |
| !! | GTCATTCCATTTAATTATTT+GGG | + | chr6_4:18329926-18329945 | None:intergenic | 20.0% |
| !! | ACACAAATTTGACATTAATT+TGG | + | chr6_4:18331276-18331295 | None:intergenic | 20.0% |
| !! | ATAACAAGTTAATGAATGAT+TGG | + | chr6_4:18331338-18331357 | None:intergenic | 20.0% |
| !!! | CATATTTTTCATCTTTTTTG+AGG | + | chr6_4:18331829-18331848 | None:intergenic | 20.0% |
| ! | TCAAAAAAATCATTGACACA+TGG | - | chr6_4:18325690-18325709 | Msa0980310:three_prime_UTR | 25.0% |
| !! | GATTCGTTTCTTTTATAACA+AGG | + | chr6_4:18325721-18325740 | None:intergenic | 25.0% |
| !!! | ACTAAATTTTTTGAAGTGTG+TGG | + | chr6_4:18325759-18325778 | None:intergenic | 25.0% |
| ! | AGTTGAAGAGTGAATATAAT+GGG | + | chr6_4:18325782-18325801 | None:intergenic | 25.0% |
| ! | TAGTTGAAGAGTGAATATAA+TGG | + | chr6_4:18325783-18325802 | None:intergenic | 25.0% |
| ! | TGGTTAAATGCTTTGATAAA+GGG | + | chr6_4:18325809-18325828 | None:intergenic | 25.0% |
| ! | AAGAAATTAAGTTTGGGAAT+GGG | + | chr6_4:18325884-18325903 | None:intergenic | 25.0% |
| ! | GATTGTGAAGAAATTAAGTT+TGG | + | chr6_4:18325891-18325910 | None:intergenic | 25.0% |
| !!! | ACTATATTTTAAGGTTGGTA+TGG | + | chr6_4:18326002-18326021 | None:intergenic | 25.0% |
| !!! | TTTTGGAGGACTATATTTTA+AGG | + | chr6_4:18326011-18326030 | None:intergenic | 25.0% |
| !!! | TGGATATTTTTTGTTGGTAT+TGG | + | chr6_4:18326059-18326078 | None:intergenic | 25.0% |
| ! | TCAAATAATAATTTCCTGGA+TGG | + | chr6_4:18326156-18326175 | None:intergenic | 25.0% |
| ! | TATTTGATTCATATGGATCA+TGG | - | chr6_4:18326169-18326188 | Msa0980310:CDS | 25.0% |
| ! | TGAATGAAATTCATATGCTT+TGG | + | chr6_4:18326578-18326597 | None:intergenic | 25.0% |
| ! | CCAATTTAGTCACTAAAATT+TGG | + | chr6_4:18327001-18327020 | None:intergenic | 25.0% |
| !!! | CCAAATTTTAGTGACTAAAT+TGG | - | chr6_4:18326998-18327017 | Msa0980310:intron | 25.0% |
| !! | ATATTTTCCAGCAATAAAAG+AGG | - | chr6_4:18327075-18327094 | Msa0980310:intron | 25.0% |
| !! | TATTTTCCAGCAATAAAAGA+GGG | - | chr6_4:18327076-18327095 | Msa0980310:intron | 25.0% |
| ! | GTATATAGTTTAAAAGCTGT+TGG | + | chr6_4:18327180-18327199 | None:intergenic | 25.0% |
| !! | ACAGCTTTTAAACTATATAC+AGG | - | chr6_4:18327180-18327199 | Msa0980310:intron | 25.0% |
| ! | GAACAAATCTAAAGGATTAA+AGG | + | chr6_4:18327221-18327240 | None:intergenic | 25.0% |
| ! | AAAGGTAAATTACAAATGCA+TGG | + | chr6_4:18327285-18327304 | None:intergenic | 25.0% |
| ! | AATAAAATACTTCACGTGAA+AGG | + | chr6_4:18327303-18327322 | None:intergenic | 25.0% |
| ! | GTGAGAGAGAAAATTATTAA+GGG | + | chr6_4:18327580-18327599 | None:intergenic | 25.0% |
| ! | TGTGAGAGAGAAAATTATTA+AGG | + | chr6_4:18327581-18327600 | None:intergenic | 25.0% |
| ! | TTAATAAAATTTGAGTGTGG+CGG | + | chr6_4:18327990-18328009 | None:intergenic | 25.0% |
| ! | AAAATATATACACAAAGAGG+GGG | - | chr6_4:18328022-18328041 | Msa0980310:intron | 25.0% |
| !!! | TTTTATTTGTTTGTTTCGGA+GGG | + | chr6_4:18328061-18328080 | None:intergenic | 25.0% |
| !!! | ACAAGGTATTATTTTTGCTA+TGG | + | chr6_4:18328400-18328419 | None:intergenic | 25.0% |
| !!! | ATTTTTTGGCGTTTGATATA+TGG | + | chr6_4:18329044-18329063 | None:intergenic | 25.0% |
| ! | TATCAAACGCCAAAAAATAA+AGG | - | chr6_4:18329046-18329065 | Msa0980310:intron | 25.0% |
| ! | TTAATTTATGGTCCGATAAT+TGG | + | chr6_4:18329376-18329395 | None:intergenic | 25.0% |
| ! | CAGGGGAAAATATTAATTTA+TGG | + | chr6_4:18329388-18329407 | None:intergenic | 25.0% |
| ! | GTTATATGAAATCTTCAGTT+TGG | + | chr6_4:18329469-18329488 | None:intergenic | 25.0% |
| ! | TTTAATGTTGAAATTGGCAT+GGG | + | chr6_4:18329567-18329586 | None:intergenic | 25.0% |
| ! | TTTCTTGGAAAATAATGTGT+AGG | + | chr6_4:18329643-18329662 | None:intergenic | 25.0% |
| ! | GGTCATTCCATTTAATTATT+TGG | + | chr6_4:18329927-18329946 | None:intergenic | 25.0% |
| !!! | TTCAAAGAGCAGATTTTTTA+CGG | + | chr6_4:18330008-18330027 | None:intergenic | 25.0% |
| ! | ATCAATACAATTAATAGCCT+CGG | - | chr6_4:18330486-18330505 | Msa0980310:CDS | 25.0% |
| !!! | TTTTAATTCCGAAAATTCCA+GGG | + | chr6_4:18330681-18330700 | None:intergenic | 25.0% |
| ! | ATATAATATCCCAAAATGTC+TGG | - | chr6_4:18330779-18330798 | Msa0980310:intron | 25.0% |
| !!! | GATTTTATTTCTGAATGCAA+AGG | - | chr6_4:18330865-18330884 | Msa0980310:intron | 25.0% |
| !!! | TCAGTATTGATAATGATTGT+GGG | + | chr6_4:18330963-18330982 | None:intergenic | 25.0% |
| !!! | TTCAGTATTGATAATGATTG+TGG | + | chr6_4:18330964-18330983 | None:intergenic | 25.0% |
| ! | AATGATCAATACAACTACAA+GGG | + | chr6_4:18331173-18331192 | None:intergenic | 25.0% |
| ! | TAATGATCAATACAACTACA+AGG | + | chr6_4:18331174-18331193 | None:intergenic | 25.0% |
| ! | GTTAGTATTAACCATATAGT+TGG | - | chr6_4:18331224-18331243 | Msa0980310:intron | 25.0% |
| !!! | TTTTCTGAGTATTGTATTCT+TGG | - | chr6_4:18331405-18331424 | Msa0980310:CDS | 25.0% |
| !! | TTTCTGAGTATTGTATTCTT+GGG | - | chr6_4:18331406-18331425 | Msa0980310:CDS | 25.0% |
| ! | ACACAAAATTTGTGTAGTAT+AGG | + | chr6_4:18331458-18331477 | None:intergenic | 25.0% |
| ! | TAGAATTGCATATAACTGTT+TGG | + | chr6_4:18331500-18331519 | None:intergenic | 25.0% |
| ! | ACTCAAAGATTATAGGAAAA+TGG | - | chr6_4:18331605-18331624 | Msa0980310:CDS | 25.0% |
| !! | TTCTTAAACTTTCTAGCAAA+TGG | + | chr6_4:18331645-18331664 | None:intergenic | 25.0% |
| ! | GGTTTGAAAATTGAGAATTA+TGG | - | chr6_4:18331783-18331802 | Msa0980310:five_prime_UTR | 25.0% |
| ! | TGTGTGGCTTACTTAATTTT+TGG | + | chr6_4:18325743-18325762 | None:intergenic | 30.0% |
| GTGGTTAAATGCTTTGATAA+AGG | + | chr6_4:18325810-18325829 | None:intergenic | 30.0% | |
| AGTAAAGAGTAATCAAGAAG+TGG | + | chr6_4:18325829-18325848 | None:intergenic | 30.0% | |
| GAAGAAATTAAGTTTGGGAA+TGG | + | chr6_4:18325885-18325904 | None:intergenic | 30.0% | |
| ! | CTTCACAATCATCTCTAAAA+TGG | - | chr6_4:18325901-18325920 | Msa0980310:CDS | 30.0% |
| AAGAACAAAGAACAATGTTG+AGG | + | chr6_4:18325960-18325979 | None:intergenic | 30.0% | |
| !! | TAAGGTTGGTATGGTTAATT+TGG | + | chr6_4:18325993-18326012 | None:intergenic | 30.0% |
| GAGATGCTATGAAAATCAAA+AGG | - | chr6_4:18326113-18326132 | Msa0980310:CDS | 30.0% | |
| GAAAATCAAAAGGTTGTTGA+AGG | - | chr6_4:18326123-18326142 | Msa0980310:CDS | 30.0% | |
| ACATCTCTATGATCTTTCTT+TGG | + | chr6_4:18326199-18326218 | None:intergenic | 30.0% | |
| TTCTTCTTAGGAGTTGTAAA+TGG | - | chr6_4:18326344-18326363 | Msa0980310:intron | 30.0% | |
| TCTTCTTAGGAGTTGTAAAT+GGG | - | chr6_4:18326345-18326364 | Msa0980310:intron | 30.0% | |
| ATGGCATGATCCAATATTAA+AGG | + | chr6_4:18326435-18326454 | None:intergenic | 30.0% | |
| ! | TAAATATTGACTGAGCCAAT+AGG | + | chr6_4:18326803-18326822 | None:intergenic | 30.0% |
| !! | AGTCTCTAAAATTACCTCAA+AGG | - | chr6_4:18326822-18326841 | Msa0980310:intron | 30.0% |
| ! | GAAGCCAATTTTTATAGATC+CGG | - | chr6_4:18327098-18327117 | Msa0980310:intron | 30.0% |
| GCCAAAAGAAATCAGATATT+TGG | - | chr6_4:18327130-18327149 | Msa0980310:intron | 30.0% | |
| ! | GCCAAATATCTGATTTCTTT+TGG | + | chr6_4:18327134-18327153 | None:intergenic | 30.0% |
| AAAGAAATCAGATATTTGGC+AGG | - | chr6_4:18327134-18327153 | Msa0980310:intron | 30.0% | |
| AAAATAAATGATACCCTCGA+GGG | + | chr6_4:18327407-18327426 | None:intergenic | 30.0% | |
| !!! | AGGGTATCATTTATTTTGGT+CGG | - | chr6_4:18327410-18327429 | Msa0980310:intron | 30.0% |
| TTTCTTAATCTGTGTGCAAT+TGG | - | chr6_4:18327689-18327708 | Msa0980310:intron | 30.0% | |
| TCTATTTGCATAAGTATCAG+TGG | - | chr6_4:18327775-18327794 | Msa0980310:intron | 30.0% | |
| AAATATATACACAAAGAGGG+GGG | - | chr6_4:18328023-18328042 | Msa0980310:intron | 30.0% | |
| !! | CTTTTATTTGTTTGTTTCGG+AGG | + | chr6_4:18328062-18328081 | None:intergenic | 30.0% |
| AATAAAAGCTACTACAGTCT+AGG | - | chr6_4:18328074-18328093 | Msa0980310:intron | 30.0% | |
| ATAAAAGCTACTACAGTCTA+GGG | - | chr6_4:18328075-18328094 | Msa0980310:intron | 30.0% | |
| AAATCATAAGCTAAATCAGG+CGG | - | chr6_4:18328135-18328154 | Msa0980310:intron | 30.0% | |
| !! | TATTTTTGCTATGGAGTATG+CGG | + | chr6_4:18328391-18328410 | None:intergenic | 30.0% |
| !!! | TCTTGCAACAGTTTTTTCTT+CGG | + | chr6_4:18328427-18328446 | None:intergenic | 30.0% |
| ! | GGAATTTTTCGTGATCATTT+AGG | + | chr6_4:18328483-18328502 | None:intergenic | 30.0% |
| ! | AGGATATTATTCCGATGTTT+TGG | + | chr6_4:18328578-18328597 | None:intergenic | 30.0% |
| TCGGAATAATATCCTTGAAT+CGG | - | chr6_4:18328583-18328602 | Msa0980310:intron | 30.0% | |
| !! | ATAGAAAAAGCATCAAGGAT+CGG | - | chr6_4:18328621-18328640 | Msa0980310:intron | 30.0% |
| ACAATCCAAAAGAGAGATAA+CGG | - | chr6_4:18328845-18328864 | Msa0980310:intron | 30.0% | |
| !!! | CATCGCATTCCTTTATTTTT+TGG | + | chr6_4:18329058-18329077 | None:intergenic | 30.0% |
| CAAAAAATAAAGGAATGCGA+TGG | - | chr6_4:18329056-18329075 | Msa0980310:intron | 30.0% | |
| TCAAACTCTATTTGGATAGT+GGG | + | chr6_4:18329413-18329432 | None:intergenic | 30.0% | |
| CAATTACCTCAAACTCTATT+TGG | + | chr6_4:18329421-18329440 | None:intergenic | 30.0% | |
| ! | AATAGAGTTTGAGGTAATTG+TGG | - | chr6_4:18329421-18329440 | Msa0980310:intron | 30.0% |
| ! | ATAGAGTTTGAGGTAATTGT+GGG | - | chr6_4:18329422-18329441 | Msa0980310:intron | 30.0% |
| ! | TCAAATATTTTCGAAATGGG+AGG | + | chr6_4:18329502-18329521 | None:intergenic | 30.0% |
| CTTTAATGTTGAAATTGGCA+TGG | + | chr6_4:18329568-18329587 | None:intergenic | 30.0% | |
| ! | AGATTCATTGATTAATCGAG+TGG | - | chr6_4:18329586-18329605 | Msa0980310:intron | 30.0% |
| TCTTACGTTTATTGGATTCT+TGG | + | chr6_4:18329718-18329737 | None:intergenic | 30.0% | |
| ATCGATTATTCATGGTATGT+TGG | + | chr6_4:18329777-18329796 | None:intergenic | 30.0% | |
| CGATAGAATTAAAGCAAAGT+TGG | + | chr6_4:18329852-18329871 | None:intergenic | 30.0% | |
| TATCGATGATGTTGAGAAAA+TGG | - | chr6_4:18329867-18329886 | Msa0980310:intron | 30.0% | |
| ATCGATGATGTTGAGAAAAT+GGG | - | chr6_4:18329868-18329887 | Msa0980310:intron | 30.0% | |
| GGACATCCCAAATAATTAAA+TGG | - | chr6_4:18329917-18329936 | Msa0980310:intron | 30.0% | |
| !!! | TCAAAGAGCAGATTTTTTAC+GGG | + | chr6_4:18330007-18330026 | None:intergenic | 30.0% |
| ! | ATGTCTCTTAAAGATTTTCC+AGG | + | chr6_4:18330065-18330084 | None:intergenic | 30.0% |
| ATATAAAATATGCGTCGGAA+AGG | - | chr6_4:18330132-18330151 | Msa0980310:intron | 30.0% | |
| !!! | ATCTATTTTGGTGAATGCTA+AGG | + | chr6_4:18330311-18330330 | None:intergenic | 30.0% |
| TAGCATTCACCAAAATAGAT+AGG | - | chr6_4:18330311-18330330 | Msa0980310:intron | 30.0% | |
| !!! | TCTCTTTGGTTTTCACAAAA+TGG | + | chr6_4:18330363-18330382 | None:intergenic | 30.0% |
| ! | TACTCAATTTGGTTTCTCTT+TGG | + | chr6_4:18330377-18330396 | None:intergenic | 30.0% |
| AAGAGAAACCAAATTGAGTA+AGG | - | chr6_4:18330377-18330396 | Msa0980310:intron | 30.0% | |
| !! | AGCTTTTGACACTTTTGATT+GGG | + | chr6_4:18330419-18330438 | None:intergenic | 30.0% |
| ! | AAGCTTTTGACACTTTTGAT+TGG | + | chr6_4:18330420-18330439 | None:intergenic | 30.0% |
| ! | TAACACAGTCTGAAATATGT+CGG | - | chr6_4:18330518-18330537 | Msa0980310:CDS | 30.0% |
| TTACAAAAATTCTTGCAGAC+CGG | + | chr6_4:18330600-18330619 | None:intergenic | 30.0% | |
| TTTAATTCCGAAAATTCCAG+GGG | + | chr6_4:18330680-18330699 | None:intergenic | 30.0% | |
| !!! | GTTTTAATTCCGAAAATTCC+AGG | + | chr6_4:18330682-18330701 | None:intergenic | 30.0% |
| GGATATTATATCTAATGACG+TGG | + | chr6_4:18330770-18330789 | None:intergenic | 30.0% | |
| GCATTCAGAAATAAAATCAG+CGG | + | chr6_4:18330863-18330882 | None:intergenic | 30.0% | |
| ! | ATTGATTCCAAGATTGGTTA+CGG | + | chr6_4:18330920-18330939 | None:intergenic | 30.0% |
| TGATTGTGGGGTTAATAATA+TGG | + | chr6_4:18330950-18330969 | None:intergenic | 30.0% | |
| !! | CAGTATTGATAATGATTGTG+GGG | + | chr6_4:18330962-18330981 | None:intergenic | 30.0% |
| TATCAATACTGAAGATAGAC+TGG | - | chr6_4:18330971-18330990 | Msa0980310:intron | 30.0% | |
| GTATTAACCATATAGTTGGA+TGG | - | chr6_4:18331228-18331247 | Msa0980310:intron | 30.0% | |
| GAAATTACCATCCAACTATA+TGG | + | chr6_4:18331238-18331257 | None:intergenic | 30.0% | |
| CAAAATTTGTGTAGTATAGG+AGG | + | chr6_4:18331455-18331474 | None:intergenic | 30.0% | |
| ATGATCTACACTACATTACT+TGG | - | chr6_4:18331547-18331566 | Msa0980310:CDS | 30.0% | |
| TGATCTACACTACATTACTT+GGG | - | chr6_4:18331548-18331567 | Msa0980310:CDS | 30.0% | |
| CTCTAACACTCAAAGATTAT+AGG | - | chr6_4:18331598-18331617 | Msa0980310:CDS | 30.0% | |
| ! | TAAACTTTCTAGCAAATGGA+CGG | + | chr6_4:18331641-18331660 | None:intergenic | 30.0% |
| ! | AAATTGATAGAGAGCTTTTG+AGG | - | chr6_4:18331685-18331704 | Msa0980310:CDS | 30.0% |
| ! | AATCGTGGACAATTTTCTTT+TGG | - | chr6_4:18331711-18331730 | Msa0980310:CDS | 30.0% |
| ATTTACGCAAACAACAATGT+CGG | - | chr6_4:18331874-18331893 | Msa0980310:five_prime_UTR | 30.0% | |
| AAAATCATTGACACATGGAG+AGG | - | chr6_4:18325695-18325714 | Msa0980310:three_prime_UTR | 35.0% | |
| CAAAGAACAATGTTGAGGTA+AGG | + | chr6_4:18325955-18325974 | None:intergenic | 35.0% | |
| ! | GTTGGTATGGTTAATTTGGT+GGG | + | chr6_4:18325989-18326008 | None:intergenic | 35.0% |
| !!! | GGAGGACTATATTTTAAGGT+TGG | + | chr6_4:18326007-18326026 | None:intergenic | 35.0% |
| !!! | AAGGTTGTGTTCATTGGTTT+TGG | + | chr6_4:18326028-18326047 | None:intergenic | 35.0% |
| ATGTTGAAGGTTGTGTTCAT+TGG | + | chr6_4:18326034-18326053 | None:intergenic | 35.0% | |
| ! | GTGACTAATGAACCTGTTTT+TGG | - | chr6_4:18326229-18326248 | Msa0980310:CDS | 35.0% |
| TTTCCTACTTGACCAAAAAC+AGG | + | chr6_4:18326244-18326263 | None:intergenic | 35.0% | |
| TTGGTCAAGTAGGAAATGTT+TGG | - | chr6_4:18326248-18326267 | Msa0980310:CDS | 35.0% | |
| ! | AGAGTTGTAGAAAGCATAGT+TGG | + | chr6_4:18326310-18326329 | None:intergenic | 35.0% |
| TTCTACAACTCTTCATGCTA+TGG | - | chr6_4:18326318-18326337 | Msa0980310:intron | 35.0% | |
| ATGCTATGGCAATTCTTCTT+AGG | - | chr6_4:18326332-18326351 | Msa0980310:intron | 35.0% | |
| TTAGGAGTTGTAAATGGGAT+TGG | - | chr6_4:18326350-18326369 | Msa0980310:intron | 35.0% | |
| TAGTGCATCTGATTATCCTT+TGG | - | chr6_4:18326384-18326403 | Msa0980310:intron | 35.0% | |
| TATCCTTTGGTTACACAAGA+TGG | - | chr6_4:18326397-18326416 | Msa0980310:intron | 35.0% | |
| ATACCATCTTGTGTAACCAA+AGG | + | chr6_4:18326403-18326422 | None:intergenic | 35.0% | |
| TTTGGTTACACAAGATGGTA+TGG | - | chr6_4:18326402-18326421 | Msa0980310:intron | 35.0% | |
| CATGGATCAGATCTGAAAAT+TGG | + | chr6_4:18326541-18326560 | None:intergenic | 35.0% | |
| !! | ATGCTTTGGAATTCCAGAAA+AGG | + | chr6_4:18326564-18326583 | None:intergenic | 35.0% |
| ATTCACCATAGCAGTCATTT+GGG | - | chr6_4:18326593-18326612 | Msa0980310:intron | 35.0% | |
| TCATCACATTAGTTCCTTTG+AGG | + | chr6_4:18326839-18326858 | None:intergenic | 35.0% | |
| AGAGCCGGATCTATAAAAAT+TGG | + | chr6_4:18327105-18327124 | None:intergenic | 35.0% | |
| TGACTTATCTATAGCATGTG+AGG | - | chr6_4:18327329-18327348 | Msa0980310:intron | 35.0% | |
| CAAAATAAATGATACCCTCG+AGG | + | chr6_4:18327408-18327427 | None:intergenic | 35.0% | |
| !!! | CTCGAGGGTATCATTTATTT+TGG | - | chr6_4:18327406-18327425 | Msa0980310:intron | 35.0% |
| !!! | GACACTCATTTTGAAACGAT+GGG | - | chr6_4:18327719-18327738 | Msa0980310:intron | 35.0% |
| !!! | GATTTTTTTCGGGATAGATG+TGG | + | chr6_4:18328120-18328139 | None:intergenic | 35.0% |
| AATATTGGTCACTCCATTAC+TGG | + | chr6_4:18328183-18328202 | None:intergenic | 35.0% | |
| GCTGATAGGTTAGCAAATAT+TGG | + | chr6_4:18328198-18328217 | None:intergenic | 35.0% | |
| ! | AAGGTAATGTTTGTGCTGAT+AGG | + | chr6_4:18328212-18328231 | None:intergenic | 35.0% |
| TCTTCTCATATATACCGTGA+AGG | + | chr6_4:18328231-18328250 | None:intergenic | 35.0% | |
| ! | GGTGCATTTTCTTGTAATCT+TGG | + | chr6_4:18328450-18328469 | None:intergenic | 35.0% |
| GATTACAAGAAAATGCACCA+AGG | - | chr6_4:18328451-18328470 | Msa0980310:intron | 35.0% | |
| GATCATTTAGGTACATTCCT+TGG | + | chr6_4:18328471-18328490 | None:intergenic | 35.0% | |
| ! | GTTAATAATCATGCTGCTTG+TGG | + | chr6_4:18328507-18328526 | None:intergenic | 35.0% |
| !! | GAGGAATAGAAAAAGCATCA+AGG | - | chr6_4:18328616-18328635 | Msa0980310:intron | 35.0% |
| !! | AGCTGGTCATTGTTTGTTAT+TGG | + | chr6_4:18328652-18328671 | None:intergenic | 35.0% |
| GTTTCTTCATTGTTCCTTTG+CGG | + | chr6_4:18328925-18328944 | None:intergenic | 35.0% | |
| AAAATAAAGGAATGCGATGG+AGG | - | chr6_4:18329059-18329078 | Msa0980310:intron | 35.0% | |
| ! | AGCAAAATCCTTTTTAACGC+CGG | + | chr6_4:18329132-18329151 | None:intergenic | 35.0% |
| ATGTGATTGACAATGGAGTT+TGG | + | chr6_4:18329280-18329299 | None:intergenic | 35.0% | |
| ! | ACATCTAAAATATCCAGCAG+CGG | - | chr6_4:18329341-18329360 | Msa0980310:intron | 35.0% |
| TTATGGTCCGATAATTGGAT+GGG | + | chr6_4:18329371-18329390 | None:intergenic | 35.0% | |
| TTTATGGTCCGATAATTGGA+TGG | + | chr6_4:18329372-18329391 | None:intergenic | 35.0% | |
| CTCAAACTCTATTTGGATAG+TGG | + | chr6_4:18329414-18329433 | None:intergenic | 35.0% | |
| CACTATCCAAATAGAGTTTG+AGG | - | chr6_4:18329412-18329431 | Msa0980310:intron | 35.0% | |
| GATTTCATATAACGTGAGCA+AGG | - | chr6_4:18329476-18329495 | Msa0980310:intron | 35.0% | |
| GAAATTGGCATGGGATTTAT+TGG | + | chr6_4:18329558-18329577 | None:intergenic | 35.0% | |
| ! | GGAAAGTTTGTACTGTTTCT+TGG | + | chr6_4:18329658-18329677 | None:intergenic | 35.0% |
| TCGTAGTCTCTTACGTTTAT+TGG | + | chr6_4:18329726-18329745 | None:intergenic | 35.0% | |
| AATAAACGTAAGAGACTACG+AGG | - | chr6_4:18329725-18329744 | Msa0980310:intron | 35.0% | |
| ACTCTTTCCATGTCTATATG+TGG | + | chr6_4:18329751-18329770 | None:intergenic | 35.0% | |
| CTGGTGAAATCGATTATTCA+TGG | + | chr6_4:18329785-18329804 | None:intergenic | 35.0% | |
| ! | GAATAATCGATTTCACCAGT+TGG | - | chr6_4:18329786-18329805 | Msa0980310:intron | 35.0% |
| ! | TGGGATGTCCAATTTTCAAA+GGG | + | chr6_4:18329907-18329926 | None:intergenic | 35.0% |
| ! | TTGGGATGTCCAATTTTCAA+AGG | + | chr6_4:18329908-18329927 | None:intergenic | 35.0% |
| !! | AGGATTATTCAAAAGTGTCC+GGG | + | chr6_4:18330045-18330064 | None:intergenic | 35.0% |
| !! | CAGGATTATTCAAAAGTGTC+CGG | + | chr6_4:18330046-18330065 | None:intergenic | 35.0% |
| !!! | GACATCATGATTTTTTGCAC+AGG | + | chr6_4:18330106-18330125 | None:intergenic | 35.0% |
| TCCGCATATAAAATATGCGT+CGG | - | chr6_4:18330127-18330146 | Msa0980310:intron | 35.0% | |
| ! | TCCGACGCATATTTTATATG+CGG | + | chr6_4:18330131-18330150 | None:intergenic | 35.0% |
| CATTCACCAAAATAGATAGG+CGG | - | chr6_4:18330314-18330333 | Msa0980310:intron | 35.0% | |
| ATTCACCAAAATAGATAGGC+GGG | - | chr6_4:18330315-18330334 | Msa0980310:intron | 35.0% | |
| GAAACCAAATTGAGTAAGGA+CGG | - | chr6_4:18330381-18330400 | Msa0980310:intron | 35.0% | |
| ! | TGTATTGATAAGCGTCAGTT+TGG | + | chr6_4:18330475-18330494 | None:intergenic | 35.0% |
| TGAAAGTTTGCAAGAGCAAT+AGG | - | chr6_4:18330631-18330650 | Msa0980310:intron | 35.0% | |
| !!! | ATCTAATGACGTGGTTTTGT+CGG | + | chr6_4:18330761-18330780 | None:intergenic | 35.0% |
| ! | TCACTTCTACCAGACATTTT+GGG | + | chr6_4:18330791-18330810 | None:intergenic | 35.0% |
| TTGTGGGGTTAATAATATGG+TGG | + | chr6_4:18330947-18330966 | None:intergenic | 35.0% | |
| TCAAAAATCTAGGTTCAGCT+TGG | - | chr6_4:18331364-18331383 | Msa0980310:CDS | 35.0% | |
| ! | TGAGTATTGTATTCTTGGGT+GGG | - | chr6_4:18331410-18331429 | Msa0980310:CDS | 35.0% |
| AATTTGTGTAGTATAGGAGG+AGG | + | chr6_4:18331452-18331471 | None:intergenic | 35.0% | |
| ! | AATTTTGTGTCATCTCCAGA+AGG | - | chr6_4:18331468-18331487 | Msa0980310:CDS | 35.0% |
| ! | ATTTTGTGTCATCTCCAGAA+GGG | - | chr6_4:18331469-18331488 | Msa0980310:CDS | 35.0% |
| !! | AGAGATCTTGGATGTTGTTT+TGG | + | chr6_4:18331582-18331601 | None:intergenic | 35.0% |
| TCTTTGAGTGTTAGAGATCT+TGG | + | chr6_4:18331594-18331613 | None:intergenic | 35.0% | |
| !! | GACAATTTTCTTTTGGAGGA+TGG | - | chr6_4:18331718-18331737 | Msa0980310:CDS | 35.0% |
| CAATGTTGAGGTAAGGATAG+AGG | + | chr6_4:18325948-18325967 | None:intergenic | 40.0% | |
| ! | GGTTGGTATGGTTAATTTGG+TGG | + | chr6_4:18325990-18326009 | None:intergenic | 40.0% |
| !!! | GTTGTGTTCATTGGTTTTGG+AGG | + | chr6_4:18326025-18326044 | None:intergenic | 40.0% |
| ! | GTTGGTATTGGAGATGTTGA+AGG | + | chr6_4:18326047-18326066 | None:intergenic | 40.0% |
| !!! | GAACCTGTTTTTGGTCAAGT+AGG | - | chr6_4:18326238-18326257 | Msa0980310:CDS | 40.0% |
| TGGTGAGTGGCCTTTAATAT+TGG | - | chr6_4:18326422-18326441 | Msa0980310:intron | 40.0% | |
| TTGGAATTCCAGAAAAGGCA+TGG | + | chr6_4:18326559-18326578 | None:intergenic | 40.0% | |
| CATTCACCATAGCAGTCATT+TGG | - | chr6_4:18326592-18326611 | Msa0980310:intron | 40.0% | |
| !! | TTCTTTTGGCTGTAAAGAGC+CGG | + | chr6_4:18327120-18327139 | None:intergenic | 40.0% |
| TTTGGCAGGTAACTAAGCAA+AGG | - | chr6_4:18327148-18327167 | Msa0980310:intron | 40.0% | |
| ACTATAACGACCACTCTGTT+TGG | + | chr6_4:18327363-18327382 | None:intergenic | 40.0% | |
| !!! | CGACACTCATTTTGAAACGA+TGG | - | chr6_4:18327718-18327737 | Msa0980310:intron | 40.0% |
| AAATTTGAGTGTGGCGGTAT+AGG | + | chr6_4:18327984-18328003 | None:intergenic | 40.0% | |
| ! | TTGTTTGTTTCGGAGGGTTT+TGG | + | chr6_4:18328055-18328074 | None:intergenic | 40.0% |
| GTCTAGGGAAATCTGTAGTT+AGG | - | chr6_4:18328090-18328109 | Msa0980310:intron | 40.0% | |
| CAGCACAAACATTACCTTCA+CGG | - | chr6_4:18328214-18328233 | Msa0980310:intron | 40.0% | |
| AAGAGATAACCTGAACTCCT+AGG | - | chr6_4:18328247-18328266 | Msa0980310:intron | 40.0% | |
| CTATTATGCTTCGGAATCGA+TGG | + | chr6_4:18328287-18328306 | None:intergenic | 40.0% | |
| !! | CATCGATTCCGAAGCATAAT+AGG | - | chr6_4:18328285-18328304 | Msa0980310:intron | 40.0% |
| CCTTGGTTCCTATTATGCTT+CGG | + | chr6_4:18328296-18328315 | None:intergenic | 40.0% | |
| AAGCATAATAGGAACCAAGG+AGG | - | chr6_4:18328296-18328315 | Msa0980310:intron | 40.0% | |
| AGCATAATAGGAACCAAGGA+GGG | - | chr6_4:18328297-18328316 | Msa0980310:intron | 40.0% | |
| ! | GTCACTTTCCAACCATATGT+TGG | - | chr6_4:18328350-18328369 | Msa0980310:intron | 40.0% |
| !!! | GTTTTTTCTTCGGAGGTACA+AGG | + | chr6_4:18328417-18328436 | None:intergenic | 40.0% |
| !!! | TGCAACAGTTTTTTCTTCGG+AGG | + | chr6_4:18328424-18328443 | None:intergenic | 40.0% |
| ! | AATAATCATGCTGCTTGTGG+TGG | + | chr6_4:18328504-18328523 | None:intergenic | 40.0% |
| TGGAAGAAGGTAAATACGGA+TGG | + | chr6_4:18328537-18328556 | None:intergenic | 40.0% | |
| TCCGTATTTACCTTCTTCCA+CGG | - | chr6_4:18328537-18328556 | Msa0980310:intron | 40.0% | |
| TCCGTGGAAGAAGGTAAATA+CGG | + | chr6_4:18328541-18328560 | None:intergenic | 40.0% | |
| ! | CACTTCCGTTATCTCTCTTT+TGG | + | chr6_4:18328853-18328872 | None:intergenic | 40.0% |
| CAAATGAGCAGAAGTTTCCT+CGG | - | chr6_4:18328944-18328963 | Msa0980310:intron | 40.0% | |
| CAATTTATGTATGCAGACCG+AGG | + | chr6_4:18328964-18328983 | None:intergenic | 40.0% | |
| TGATGAGAATCTTCGTGCTA+GGG | + | chr6_4:18329009-18329028 | None:intergenic | 40.0% | |
| TTCTTTGGCCGGATTTGATA+TGG | + | chr6_4:18329097-18329116 | None:intergenic | 40.0% | |
| TCCAAGAAAGAAGTCACATG+CGG | - | chr6_4:18329233-18329252 | Msa0980310:intron | 40.0% | |
| ! | AACCTTCATGACCTTTTCTC+CGG | + | chr6_4:18329314-18329333 | None:intergenic | 40.0% |
| !! | TATTTGGATAGTGGGTACAG+GGG | + | chr6_4:18329405-18329424 | None:intergenic | 40.0% |
| !! | CTATTTGGATAGTGGGTACA+GGG | + | chr6_4:18329406-18329425 | None:intergenic | 40.0% |
| !! | TCTATTTGGATAGTGGGTAC+AGG | + | chr6_4:18329407-18329426 | None:intergenic | 40.0% |
| GGAAAATAATGTGTAGGCCT+TGG | + | chr6_4:18329637-18329656 | None:intergenic | 40.0% | |
| TTAAAGCAAAGTTGGCTACC+TGG | + | chr6_4:18329844-18329863 | None:intergenic | 40.0% | |
| GATGATGTTGAGAAAATGGG+AGG | - | chr6_4:18329871-18329890 | Msa0980310:intron | 40.0% | |
| TTGAGAAAATGGGAGGACTT+CGG | - | chr6_4:18329878-18329897 | Msa0980310:intron | 40.0% | |
| ! | TTCGGCTTCCCTTTGAAAAT+TGG | - | chr6_4:18329896-18329915 | Msa0980310:intron | 40.0% |
| !!! | TTTGCTTGGTTTTAGTGCAG+GGG | + | chr6_4:18329948-18329967 | None:intergenic | 40.0% |
| !!! | CTTTGCTTGGTTTTAGTGCA+GGG | + | chr6_4:18329949-18329968 | None:intergenic | 40.0% |
| TGAATTGCTAACAATCTGCC+CGG | - | chr6_4:18330024-18330043 | Msa0980310:intron | 40.0% | |
| ! | CGGACACTTTTGAATAATCC+TGG | - | chr6_4:18330044-18330063 | Msa0980310:intron | 40.0% |
| CATAAACCATAGGGGATATG+CGG | - | chr6_4:18330167-18330186 | Msa0980310:intron | 40.0% | |
| ATTCTTCTCTTGCTCTCATG+GGG | + | chr6_4:18330281-18330300 | None:intergenic | 40.0% | |
| GATTCTTCTCTTGCTCTCAT+GGG | + | chr6_4:18330282-18330301 | None:intergenic | 40.0% | |
| ATTGCCGTCCTTACTCAATT+TGG | + | chr6_4:18330388-18330407 | None:intergenic | 40.0% | |
| ATTGATAAGCGTCAGTTTGG+TGG | + | chr6_4:18330472-18330491 | None:intergenic | 40.0% | |
| AATTAATAGCCTCGGAAGCT+AGG | - | chr6_4:18330494-18330513 | Msa0980310:CDS | 40.0% | |
| CAAAGTCTATGGGTGAATTC+CGG | + | chr6_4:18330657-18330676 | None:intergenic | 40.0% | |
| !!! | GTTCAGGATTTTTTTCGCAC+AGG | + | chr6_4:18330739-18330758 | None:intergenic | 40.0% |
| ! | GTCACTTCTACCAGACATTT+TGG | + | chr6_4:18330792-18330811 | None:intergenic | 40.0% |
| AGCGGTATTTGACCTTAATG+GGG | + | chr6_4:18330845-18330864 | None:intergenic | 40.0% | |
| CAGCGGTATTTGACCTTAAT+GGG | + | chr6_4:18330846-18330865 | None:intergenic | 40.0% | |
| TCAGCGGTATTTGACCTTAA+TGG | + | chr6_4:18330847-18330866 | None:intergenic | 40.0% | |
| ! | GGAGCAATTGATTCCAAGAT+TGG | + | chr6_4:18330926-18330945 | None:intergenic | 40.0% |
| TTCGTGAGTGCGTTCAAATA+TGG | - | chr6_4:18331145-18331164 | Msa0980310:intron | 40.0% | |
| ! | CTGAGTATTGTATTCTTGGG+TGG | - | chr6_4:18331409-18331428 | Msa0980310:CDS | 40.0% |
| TTGGGTGGGAAAATTTACCA+AGG | - | chr6_4:18331424-18331443 | Msa0980310:CDS | 40.0% | |
| ACTGTTTGGAAATACCCTTC+TGG | + | chr6_4:18331486-18331505 | None:intergenic | 40.0% | |
| GTGTAGATCATTGTTAGCTG+TGG | + | chr6_4:18331538-18331557 | None:intergenic | 40.0% | |
| !!! | GATCTTGGATGTTGTTTTGG+AGG | + | chr6_4:18331579-18331598 | None:intergenic | 40.0% |
| ! | CGTGGACAATTTTCTTTTGG+AGG | - | chr6_4:18331714-18331733 | Msa0980310:CDS | 40.0% |
| !!! | ATCTTTTTTGAGGCCAGACT+TGG | + | chr6_4:18331819-18331838 | None:intergenic | 40.0% |
| ! | TTGAAGGCTTTGTACCATCC+AGG | - | chr6_4:18326139-18326158 | Msa0980310:CDS | 45.0% |
| ACACAAGATGGTATGGTGAG+TGG | - | chr6_4:18326409-18326428 | Msa0980310:intron | 45.0% | |
| ! | GATCTGATCCATGCCTTTTC+TGG | - | chr6_4:18326548-18326567 | Msa0980310:intron | 45.0% |
| ACCATAGCAGTCATTTGGGT+TGG | - | chr6_4:18326597-18326616 | Msa0980310:intron | 45.0% | |
| TCCAACCCAAATGACTGCTA+TGG | + | chr6_4:18326601-18326620 | None:intergenic | 45.0% | |
| ! | AGGGGCATAGTACAAGTGAT+TGG | + | chr6_4:18326941-18326960 | None:intergenic | 45.0% |
| ! | TGGCTTCCCTCTTTTATTGC+TGG | + | chr6_4:18327085-18327104 | None:intergenic | 45.0% |
| TTCCAATATTGCATCCCTCG+AGG | - | chr6_4:18327390-18327409 | Msa0980310:intron | 45.0% | |
| TCCAATATTGCATCCCTCGA+GGG | - | chr6_4:18327391-18327410 | Msa0980310:intron | 45.0% | |
| TCATAAGCTAAATCAGGCGG+TGG | - | chr6_4:18328138-18328157 | Msa0980310:intron | 45.0% | |
| CCGAAGCATAATAGGAACCA+AGG | - | chr6_4:18328293-18328312 | Msa0980310:intron | 45.0% | |
| TATCTTTCACTCTCCCTCCT+TGG | + | chr6_4:18328313-18328332 | None:intergenic | 45.0% | |
| GGGAGAGTGAAAGATAGCAA+TGG | - | chr6_4:18328317-18328336 | Msa0980310:intron | 45.0% | |
| GGTAAATACGGATGGTTCAG+TGG | + | chr6_4:18328529-18328548 | None:intergenic | 45.0% | |
| !! | GAAGGCGCTTTCCAAAACAT+CGG | - | chr6_4:18328564-18328583 | Msa0980310:intron | 45.0% |
| CTTGGCAGCATGCAAAGATA+CGG | - | chr6_4:18328713-18328732 | Msa0980310:intron | 45.0% | |
| GCATGCAAAGATACGGCATT+CGG | - | chr6_4:18328720-18328739 | Msa0980310:intron | 45.0% | |
| GGTAACTGACATCTTTGTGG+CGG | + | chr6_4:18328802-18328821 | None:intergenic | 45.0% | |
| GCAGGTAACTGACATCTTTG+TGG | + | chr6_4:18328805-18328824 | None:intergenic | 45.0% | |
| AAAGATGTCAGTTACCTGCG+TGG | - | chr6_4:18328806-18328825 | Msa0980310:intron | 45.0% | |
| ! | TTTTGGATTGTGTCCCGTTG+AGG | + | chr6_4:18328836-18328855 | None:intergenic | 45.0% |
| GATGAGAATCTTCGTGCTAG+GGG | + | chr6_4:18329008-18329027 | None:intergenic | 45.0% | |
| CTGATGAGAATCTTCGTGCT+AGG | + | chr6_4:18329010-18329029 | None:intergenic | 45.0% | |
| AGCACGAAGATTCTCATCAG+TGG | - | chr6_4:18329010-18329029 | Msa0980310:intron | 45.0% | |
| GCACGAAGATTCTCATCAGT+GGG | - | chr6_4:18329011-18329030 | Msa0980310:intron | 45.0% | |
| TTTGGCCGGATTTGATATGG+CGG | + | chr6_4:18329094-18329113 | None:intergenic | 45.0% | |
| AAATCCGGCCAAAGAAGTTC+AGG | - | chr6_4:18329101-18329120 | Msa0980310:intron | 45.0% | |
| ! | AATGGAGTTTGGAACTTCCC+GGG | + | chr6_4:18329269-18329288 | None:intergenic | 45.0% |
| ! | CAATGGAGTTTGGAACTTCC+CGG | + | chr6_4:18329270-18329289 | None:intergenic | 45.0% |
| GTGGCTGATGTGATTGACAA+TGG | + | chr6_4:18329287-18329306 | None:intergenic | 45.0% | |
| ! | AATCACATCAGCCACTTTCC+CGG | - | chr6_4:18329292-18329311 | Msa0980310:intron | 45.0% |
| ! | ACCTTCATGACCTTTTCTCC+GGG | + | chr6_4:18329313-18329332 | None:intergenic | 45.0% |
| CGGTTCACCCATCCAATTAT+CGG | - | chr6_4:18329361-18329380 | Msa0980310:intron | 45.0% | |
| ! | TATTGGCATCGGATGGTCAA+TGG | + | chr6_4:18329541-18329560 | None:intergenic | 45.0% |
| ! | TGGGATTTATTGGCATCGGA+TGG | + | chr6_4:18329548-18329567 | None:intergenic | 45.0% |
| GGCATGGGATTTATTGGCAT+CGG | + | chr6_4:18329552-18329571 | None:intergenic | 45.0% | |
| TACGAGGCCACATATAGACA+TGG | - | chr6_4:18329741-18329760 | Msa0980310:intron | 45.0% | |
| ! | GTGTTACTCTCTCCATCATG+GGG | + | chr6_4:18329817-18329836 | None:intergenic | 45.0% |
| !! | GGTGTTACTCTCTCCATCAT+GGG | + | chr6_4:18329818-18329837 | None:intergenic | 45.0% |
| !! | AGGTGTTACTCTCTCCATCA+TGG | + | chr6_4:18329819-18329838 | None:intergenic | 45.0% |
| !!! | GCTTTGCTTGGTTTTAGTGC+AGG | + | chr6_4:18329950-18329969 | None:intergenic | 45.0% |
| TCCCTGCAGCATAAACCATA+GGG | - | chr6_4:18330158-18330177 | Msa0980310:intron | 45.0% | |
| !!! | CCTTTTTTGTCTGGCTGAAG+AGG | + | chr6_4:18330230-18330249 | None:intergenic | 45.0% |
| CCTCTTCAGCCAGACAAAAA+AGG | - | chr6_4:18330227-18330246 | Msa0980310:intron | 45.0% | |
| TCAGCCAGACAAAAAAGGAG+CGG | - | chr6_4:18330232-18330251 | Msa0980310:intron | 45.0% | |
| GGATTCTTCTCTTGCTCTCA+TGG | + | chr6_4:18330283-18330302 | None:intergenic | 45.0% | |
| TTGGTGAATGCTAAGGCTGT+TGG | + | chr6_4:18330304-18330323 | None:intergenic | 45.0% | |
| ! | ATCTGCCCGCCTATCTATTT+TGG | + | chr6_4:18330323-18330342 | None:intergenic | 45.0% |
| !! | TTGTTTCTGTTGAGCAGCGT+GGG | + | chr6_4:18330555-18330574 | None:intergenic | 45.0% |
| !! | ATTGTTTCTGTTGAGCAGCG+TGG | + | chr6_4:18330556-18330575 | None:intergenic | 45.0% |
| GCGTTGTGATAGATGACAAC+CGG | - | chr6_4:18330578-18330597 | Msa0980310:intron | 45.0% | |
| AGTTTGCAAGAGCAATAGGC+CGG | - | chr6_4:18330635-18330654 | Msa0980310:intron | 45.0% | |
| ATTCCAGGGGCAAAGTCTAT+GGG | + | chr6_4:18330667-18330686 | None:intergenic | 45.0% | |
| AATTCCAGGGGCAAAGTCTA+TGG | + | chr6_4:18330668-18330687 | None:intergenic | 45.0% | |
| ! | GACTTTGCCCCTGGAATTTT+CGG | - | chr6_4:18330670-18330689 | Msa0980310:intron | 45.0% |
| TCCTCATCCGTAACCAATCT+TGG | - | chr6_4:18330910-18330929 | Msa0980310:intron | 45.0% | |
| ! | TCCAAGATTGGTTACGGATG+AGG | + | chr6_4:18330914-18330933 | None:intergenic | 45.0% |
| TAGTATAGGAGGAGGATCCT+TGG | + | chr6_4:18331444-18331463 | None:intergenic | 45.0% | |
| !! | GAGCTTTTGAGGAGAAATCG+TGG | - | chr6_4:18331696-18331715 | Msa0980310:CDS | 45.0% |
| TGGTGTTCATCACCATCACA+AGG | - | chr6_4:18331738-18331757 | Msa0980310:exon | 45.0% | |
| TGTTCATCACCATCACAAGG+TGG | - | chr6_4:18331741-18331760 | Msa0980310:exon | 45.0% | |
| CTATGCTTTCCACCTTGTGA+TGG | + | chr6_4:18331753-18331772 | None:intergenic | 45.0% | |
| ! | GGAAAGCATAGAGCATGTCA+TGG | - | chr6_4:18331762-18331781 | Msa0980310:five_prime_UTR | 45.0% |
| TGGTGTTCTTAAGCCAAGTC+TGG | - | chr6_4:18331803-18331822 | Msa0980310:five_prime_UTR | 45.0% | |
| !!! | AATTAAATTCTATAATTTTA+GGG | + | chr6_4:18326732-18326751 | None:intergenic | 5.0% |
| !!! | TAATTAAATTCTATAATTTT+AGG | + | chr6_4:18326733-18326752 | None:intergenic | 5.0% |
| !!! | TTGTTTATTTTTTTTTTTTT+TGG | - | chr6_4:18327881-18327900 | Msa0980310:intron | 5.0% |
| !!! | TCAAATTTTATTAAAAAAAT+GGG | - | chr6_4:18327996-18328015 | Msa0980310:intron | 5.0% |
| !! | GGCTCTGAATCCAAACAGAG+TGG | - | chr6_4:18327350-18327369 | Msa0980310:intron | 50.0% |
| ACCCTCGAGGGATGCAATAT+TGG | + | chr6_4:18327395-18327414 | None:intergenic | 50.0% | |
| ! | TTTTGGATAAACCGGGAGCG+TGG | - | chr6_4:18327898-18327917 | Msa0980310:intron | 50.0% |
| GAAACACCGACATCCCAACT+AGG | - | chr6_4:18327935-18327954 | Msa0980310:intron | 50.0% | |
| TGCCAACCTAGTTGGGATGT+CGG | + | chr6_4:18327944-18327963 | None:intergenic | 50.0% | |
| TATAGGATGGAGGTTTCCCG+GGG | + | chr6_4:18327967-18327986 | None:intergenic | 50.0% | |
| GTATAGGATGGAGGTTTCCC+GGG | + | chr6_4:18327968-18327987 | None:intergenic | 50.0% | |
| GGTATAGGATGGAGGTTTCC+CGG | + | chr6_4:18327969-18327988 | None:intergenic | 50.0% | |
| TTGAGTGTGGCGGTATAGGA+TGG | + | chr6_4:18327980-18327999 | None:intergenic | 50.0% | |
| ATACACAAAGAGGGGGGACT+AGG | - | chr6_4:18328029-18328048 | Msa0980310:intron | 50.0% | |
| ATGCCAAACCGCACCAGTAA+TGG | - | chr6_4:18328167-18328186 | Msa0980310:intron | 50.0% | |
| ACTCCATTACTGGTGCGGTT+TGG | + | chr6_4:18328173-18328192 | None:intergenic | 50.0% | |
| TGGTCACTCCATTACTGGTG+CGG | + | chr6_4:18328178-18328197 | None:intergenic | 50.0% | |
| TGGCATAATGCTTCTCGCCT+AGG | + | chr6_4:18328267-18328286 | None:intergenic | 50.0% | |
| TGGCTGGACCAACATATGGT+TGG | + | chr6_4:18328361-18328380 | None:intergenic | 50.0% | |
| ACCATATGTTGGTCCAGCCA+TGG | - | chr6_4:18328361-18328380 | Msa0980310:intron | 50.0% | |
| TCCATGGCTGGACCAACATA+TGG | + | chr6_4:18328365-18328384 | None:intergenic | 50.0% | |
| ATGGAGTATGCGGCTATCCA+TGG | + | chr6_4:18328381-18328400 | None:intergenic | 50.0% | |
| ACCTTCTTCCACGGATGTGA+AGG | - | chr6_4:18328546-18328565 | Msa0980310:intron | 50.0% | |
| TCCTTGAATCGGCGATGATG+AGG | - | chr6_4:18328594-18328613 | Msa0980310:intron | 50.0% | |
| !! | TCCTCATCATCGCCGATTCA+AGG | + | chr6_4:18328598-18328617 | None:intergenic | 50.0% |
| TTGAATCGGCGATGATGAGG+AGG | - | chr6_4:18328597-18328616 | Msa0980310:intron | 50.0% | |
| CTTAGTGGCAACTTGTCAGC+TGG | + | chr6_4:18328669-18328688 | None:intergenic | 50.0% | |
| CAAGTTGCCACTAAGAGCCA+CGG | - | chr6_4:18328674-18328693 | Msa0980310:intron | 50.0% | |
| CGTATCTTTGCATGCTGCCA+AGG | + | chr6_4:18328715-18328734 | None:intergenic | 50.0% | |
| ATACGGCATTCGGAGAGAAG+CGG | - | chr6_4:18328730-18328749 | Msa0980310:intron | 50.0% | |
| TACCTCCAAGCCAAGACCAA+AGG | - | chr6_4:18328895-18328914 | Msa0980310:intron | 50.0% | |
| ACCTCCAAGCCAAGACCAAA+GGG | - | chr6_4:18328896-18328915 | Msa0980310:intron | 50.0% | |
| TTGGCCGGATTTGATATGGC+GGG | + | chr6_4:18329093-18329112 | None:intergenic | 50.0% | |
| TGCACCTGAACTTCTTTGGC+CGG | + | chr6_4:18329108-18329127 | None:intergenic | 50.0% | |
| CAAAGAAGTTCAGGTGCAGC+CGG | - | chr6_4:18329110-18329129 | Msa0980310:intron | 50.0% | |
| ACGTCTGCCATAGGAGAAGT+AGG | - | chr6_4:18329197-18329216 | Msa0980310:intron | 50.0% | |
| AGTGCTGCCTACTTCTCCTA+TGG | + | chr6_4:18329207-18329226 | None:intergenic | 50.0% | |
| GCCGCATGTGACTTCTTTCT+TGG | + | chr6_4:18329237-18329256 | None:intergenic | 50.0% | |
| ! | TGACCTTTTCTCCGGGAAAG+TGG | + | chr6_4:18329306-18329325 | None:intergenic | 50.0% |
| TCCCGGAGAAAAGGTCATGA+AGG | - | chr6_4:18329309-18329328 | Msa0980310:intron | 50.0% | |
| TCAAGTCCACCAGCATTCCA+AGG | - | chr6_4:18329617-18329636 | Msa0980310:intron | 50.0% | |
| ATGTGTAGGCCTTGGAATGC+TGG | + | chr6_4:18329629-18329648 | None:intergenic | 50.0% | |
| GGAGAGAGTAACACCTTTCC+AGG | - | chr6_4:18329823-18329842 | Msa0980310:intron | 50.0% | |
| GCAAAGTTGGCTACCTGGAA+AGG | + | chr6_4:18329839-18329858 | None:intergenic | 50.0% | |
| CTCCAGAGTTCAGATGCTAG+CGG | + | chr6_4:18329972-18329991 | None:intergenic | 50.0% | |
| ! | CTGAACTCTGGAGGTTGTCA+TGG | - | chr6_4:18329979-18329998 | Msa0980310:intron | 50.0% |
| GTCCCTGCAGCATAAACCAT+AGG | - | chr6_4:18330157-18330176 | Msa0980310:intron | 50.0% | |
| CCCCTATGGTTTATGCTGCA+GGG | + | chr6_4:18330162-18330181 | None:intergenic | 50.0% | |
| CCCTGCAGCATAAACCATAG+GGG | - | chr6_4:18330159-18330178 | Msa0980310:intron | 50.0% | |
| TCCCCTATGGTTTATGCTGC+AGG | + | chr6_4:18330163-18330182 | None:intergenic | 50.0% | |
| !! | TGGCTGAAGAGGTGCTTAGT+CGG | + | chr6_4:18330219-18330238 | None:intergenic | 50.0% |
| !!! | GTCTCCGCTCCTTTTTTGTC+TGG | + | chr6_4:18330239-18330258 | None:intergenic | 50.0% |
| CAAAAAAGGAGCGGAGACAG+TGG | - | chr6_4:18330241-18330260 | Msa0980310:intron | 50.0% | |
| ! | GCGTCAGTTTGGTGGTAATG+TGG | + | chr6_4:18330464-18330483 | None:intergenic | 50.0% |
| CTGTGTTATCCTAGCTTCCG+AGG | + | chr6_4:18330506-18330525 | None:intergenic | 50.0% | |
| !!! | TGACGTGGTTTTGTCGGTTC+AGG | + | chr6_4:18330755-18330774 | None:intergenic | 50.0% |
| CTTAATGGGGATAGTGCACC+GGG | + | chr6_4:18330832-18330851 | None:intergenic | 50.0% | |
| CCTTAATGGGGATAGTGCAC+CGG | + | chr6_4:18330833-18330852 | None:intergenic | 50.0% | |
| TTGATGCTTGTCCACGCTCC+CGG | + | chr6_4:18327912-18327931 | None:intergenic | 55.0% | |
| GAGCGTGGACAAGCATCAAG+AGG | - | chr6_4:18327913-18327932 | Msa0980310:intron | 55.0% | |
| CACCGACATCCCAACTAGGT+TGG | - | chr6_4:18327939-18327958 | Msa0980310:intron | 55.0% | |
| AGTGTGGCGGTATAGGATGG+AGG | + | chr6_4:18327977-18327996 | None:intergenic | 55.0% | |
| TGCTTCTCGCCTAGGAGTTC+AGG | + | chr6_4:18328259-18328278 | None:intergenic | 55.0% | |
| AGTATGCGGCTATCCATGGC+TGG | + | chr6_4:18328377-18328396 | None:intergenic | 55.0% | |
| GCCTTCACATCCGTGGAAGA+AGG | + | chr6_4:18328550-18328569 | None:intergenic | 55.0% | |
| TGCTGCCAAGGTGAGAATCC+AGG | + | chr6_4:18328703-18328722 | None:intergenic | 55.0% | |
| !! | GTTGCCCTTTGGTCTTGGCT+TGG | + | chr6_4:18328903-18328922 | None:intergenic | 55.0% |
| TTGCGGTTGCCCTTTGGTCT+TGG | + | chr6_4:18328908-18328927 | None:intergenic | 55.0% | |
| AGACCAAAGGGCAACCGCAA+AGG | - | chr6_4:18328908-18328927 | Msa0980310:intron | 55.0% | |
| GTTCCTTTGCGGTTGCCCTT+TGG | + | chr6_4:18328914-18328933 | None:intergenic | 55.0% | |
| CAGCCCCGCCATATCAAATC+CGG | - | chr6_4:18329086-18329105 | Msa0980310:intron | 55.0% | |
| TGGCCGGATTTGATATGGCG+GGG | + | chr6_4:18329092-18329111 | None:intergenic | 55.0% | |
| CGGCTGCACCTGAACTTCTT+TGG | + | chr6_4:18329112-18329131 | None:intergenic | 55.0% | |
| AGGTGCAGCCGGCGTTAAAA+AGG | - | chr6_4:18329121-18329140 | Msa0980310:intron | 55.0% | |
| GCTTGGCAGCACACTACAGA+TGG | + | chr6_4:18329173-18329192 | None:intergenic | 55.0% | |
| TTCTCCTATGGCAGACGTGC+TGG | + | chr6_4:18329195-18329214 | None:intergenic | 55.0% | |
| AGAAGTCACATGCGGCAGCA+AGG | - | chr6_4:18329241-18329260 | Msa0980310:intron | 55.0% | |
| ! | CAGCCACTTTCCCGGAGAAA+AGG | - | chr6_4:18329300-18329319 | Msa0980310:intron | 55.0% |
| TGTAGGCCTTGGAATGCTGG+TGG | + | chr6_4:18329626-18329645 | None:intergenic | 55.0% | |
| CATCATGGGGCGTATCCAAC+TGG | + | chr6_4:18329804-18329823 | None:intergenic | 55.0% | |
| CAGTTGGATACGCCCCATGA+TGG | - | chr6_4:18329802-18329821 | Msa0980310:intron | 55.0% | |
| CAGATGCTAGCGGCTTTGCT+TGG | + | chr6_4:18329962-18329981 | None:intergenic | 55.0% | |
| AGCCGCTAGCATCTGAACTC+TGG | - | chr6_4:18329967-18329986 | Msa0980310:intron | 55.0% | |
| CGCTAGCATCTGAACTCTGG+AGG | - | chr6_4:18329970-18329989 | Msa0980310:intron | 55.0% | |
| ATCTCTGCAGCTCATGCTGC+TGG | + | chr6_4:18330193-18330212 | None:intergenic | 55.0% | |
| !! | GGCTGAAGAGGTGCTTAGTC+GGG | + | chr6_4:18330218-18330237 | None:intergenic | 55.0% |
| TGCTCTCATGGGGTTCGACA+AGG | + | chr6_4:18330271-18330290 | None:intergenic | 55.0% | |
| ! | TGGTAATGTGGCGCTCAAGG+TGG | + | chr6_4:18330452-18330471 | None:intergenic | 55.0% |
| ! | TGGTGGTAATGTGGCGCTCA+AGG | + | chr6_4:18330455-18330474 | None:intergenic | 55.0% |
| TCACCCATAGACTTTGCCCC+TGG | - | chr6_4:18330661-18330680 | Msa0980310:intron | 55.0% | |
| AAGTGACCTCCAAACCCGTC+TGG | - | chr6_4:18330805-18330824 | Msa0980310:intron | 55.0% | |
| CCGGTGCACTATCCCCATTA+AGG | - | chr6_4:18330830-18330849 | Msa0980310:intron | 55.0% | |
| ! | TCCCAACTAGGTTGGCACCC+CGG | - | chr6_4:18327947-18327966 | Msa0980310:intron | 60.0% |
| !! | GGAAAGCGCCTTCACATCCG+TGG | + | chr6_4:18328557-18328576 | None:intergenic | 60.0% |
| GGCAGCCTGGATTCTCACCT+TGG | - | chr6_4:18328695-18328714 | Msa0980310:intron | 60.0% | |
| ! | ACCTGCGTGGAGCACCTCAA+CGG | - | chr6_4:18328819-18328838 | Msa0980310:intron | 60.0% |
| !! | GCCCTTTGGTCTTGGCTTGG+AGG | + | chr6_4:18328900-18328919 | None:intergenic | 60.0% |
| !! | CTATGGCAGACGTGCTGGCT+TGG | + | chr6_4:18329190-18329209 | None:intergenic | 60.0% |
| CAAGCCAGCACGTCTGCCAT+AGG | - | chr6_4:18329188-18329207 | Msa0980310:intron | 60.0% | |
| TTGGATGGGTGAACCGCTGC+TGG | + | chr6_4:18329357-18329376 | None:intergenic | 60.0% | |
| TGCTGGCCGCATATCCCCTA+TGG | + | chr6_4:18330176-18330195 | None:intergenic | 60.0% | |
| ATAGTGCACCGGGTCCAGAC+GGG | + | chr6_4:18330822-18330841 | None:intergenic | 60.0% | |
| GATAGTGCACCGGGTCCAGA+CGG | + | chr6_4:18330823-18330842 | None:intergenic | 60.0% | |
| ! | CCCGGGGTGCCAACCTAGTT+GGG | + | chr6_4:18327951-18327970 | None:intergenic | 65.0% |
| ! | CCCAACTAGGTTGGCACCCC+GGG | - | chr6_4:18327948-18327967 | Msa0980310:intron | 65.0% |
| ! | TCCCGGGGTGCCAACCTAGT+TGG | + | chr6_4:18327952-18327971 | None:intergenic | 65.0% |
| CAGGCTGCCGTGGCTCTTAG+TGG | + | chr6_4:18328684-18328703 | None:intergenic | 65.0% | |
| CACTAAGAGCCACGGCAGCC+TGG | - | chr6_4:18328682-18328701 | Msa0980310:intron | 65.0% | |
| GGTGAGAATCCAGGCTGCCG+TGG | + | chr6_4:18328694-18328713 | None:intergenic | 65.0% | |
| ! | CCTGCGTGGAGCACCTCAAC+GGG | - | chr6_4:18328820-18328839 | Msa0980310:intron | 65.0% |
| ! | ACATGCGGCAGCAAGGCACC+CGG | - | chr6_4:18329248-18329267 | Msa0980310:intron | 65.0% |
| CCTCCAAACCCGTCTGGACC+CGG | - | chr6_4:18330811-18330830 | Msa0980310:intron | 65.0% | |
| ! | CCCGTTGAGGTGCTCCACGC+AGG | + | chr6_4:18328823-18328842 | None:intergenic | 70.0% |
| ! | CATGCGGCAGCAAGGCACCC+GGG | - | chr6_4:18329249-18329268 | Msa0980310:intron | 70.0% |
| ! | CCGGGTCCAGACGGGTTTGG+AGG | + | chr6_4:18330814-18330833 | None:intergenic | 70.0% |
| ! | GCACCGGGTCCAGACGGGTT+TGG | + | chr6_4:18330817-18330836 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 18325689 | 18331974 | 18325689 | ID=Msa0980310;Name=Msa0980310 |
| chr6_4 | mRNA | 18325689 | 18331974 | 18325689 | ID=Msa0980310-mRNA-1;Parent=Msa0980310;Name=Msa0980310-mRNA-1;_AED=0.12;_eAED=0.12;_QI=231|1|1|1|1|1|4|75|404 |
| chr6_4 | exon | 18325689 | 18326287 | 18325689 | ID=Msa0980310-mRNA-1:exon:5701;Parent=Msa0980310-mRNA-1 |
| chr6_4 | exon | 18330462 | 18330577 | 18330462 | ID=Msa0980310-mRNA-1:exon:5700;Parent=Msa0980310-mRNA-1 |
| chr6_4 | exon | 18331039 | 18331114 | 18331039 | ID=Msa0980310-mRNA-1:exon:5699;Parent=Msa0980310-mRNA-1 |
| chr6_4 | exon | 18331245 | 18331974 | 18331245 | ID=Msa0980310-mRNA-1:exon:5698;Parent=Msa0980310-mRNA-1 |
| chr6_4 | five_prime_UTR | 18331744 | 18331974 | 18331744 | ID=Msa0980310-mRNA-1:five_prime_utr;Parent=Msa0980310-mRNA-1 |
| chr6_4 | CDS | 18331245 | 18331743 | 18331245 | ID=Msa0980310-mRNA-1:cds;Parent=Msa0980310-mRNA-1 |
| chr6_4 | CDS | 18331039 | 18331114 | 18331039 | ID=Msa0980310-mRNA-1:cds;Parent=Msa0980310-mRNA-1 |
| chr6_4 | CDS | 18330462 | 18330577 | 18330462 | ID=Msa0980310-mRNA-1:cds;Parent=Msa0980310-mRNA-1 |
| chr6_4 | CDS | 18325764 | 18326287 | 18325764 | ID=Msa0980310-mRNA-1:cds;Parent=Msa0980310-mRNA-1 |
| chr6_4 | three_prime_UTR | 18325689 | 18325763 | 18325689 | ID=Msa0980310-mRNA-1:three_prime_utr;Parent=Msa0980310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
