Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0152430 | KEH40644.1 | 93.750 | 176 | 11 | 0 | 1 | 176 | 1 | 176 | 7.72e-112 | 347 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0152430 | sp|Q9LQV2|RDR1_ARATH | 49.133 | 173 | 86 | 2 | 5 | 176 | 3 | 174 | 2.32e-51 | 180 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0152430 | A0A072VF31 | 93.750 | 176 | 11 | 0 | 1 | 176 | 1 | 176 | 3.69e-112 | 347 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004640 | Msa0152430 | 0.804003 | 2.661422e-49 | -8.615850e-47 |
| Msa0008670 | Msa0152430 | 0.801806 | 7.565846e-49 | -8.615850e-47 |
| Msa0010890 | Msa0152430 | 0.814368 | 1.596553e-51 | -8.615850e-47 |
| Msa0011500 | Msa0152430 | 0.810553 | 1.088794e-50 | -8.615850e-47 |
| Msa0012060 | Msa0152430 | 0.821168 | 4.659746e-53 | -8.615850e-47 |
| Msa0012530 | Msa0152430 | 0.875941 | 2.070616e-68 | -8.615850e-47 |
| Msa0012550 | Msa0152430 | 0.823429 | 1.391542e-53 | -8.615850e-47 |
| Msa0017510 | Msa0152430 | 0.851411 | 9.032391e-61 | -8.615850e-47 |
| Msa0028640 | Msa0152430 | 0.810873 | 9.283048e-51 | -8.615850e-47 |
| Msa0034270 | Msa0152430 | 0.851163 | 1.061131e-60 | -8.615850e-47 |
| Msa0040450 | Msa0152430 | 0.806029 | 1.002996e-49 | -8.615850e-47 |
| Msa0045790 | Msa0152430 | 0.816236 | 6.134985e-52 | -8.615850e-47 |
| Msa0046160 | Msa0152430 | 0.814635 | 1.393221e-51 | -8.615850e-47 |
| Msa0047050 | Msa0152430 | 0.829327 | 5.478365e-55 | -8.615850e-47 |
| Msa0060400 | Msa0152430 | 0.803558 | 3.292253e-49 | -8.615850e-47 |
| Msa0061340 | Msa0152430 | 0.804050 | 2.601726e-49 | -8.615850e-47 |
| Msa0061380 | Msa0152430 | 0.881402 | 2.474052e-70 | -8.615850e-47 |
| Msa0068680 | Msa0152430 | 0.804091 | 2.551391e-49 | -8.615850e-47 |
| Msa0079400 | Msa0152430 | 0.810712 | 1.005873e-50 | -8.615850e-47 |
| Msa0087470 | Msa0152430 | 0.801042 | 1.085188e-48 | -8.615850e-47 |
| Msa0089380 | Msa0152430 | 0.821562 | 3.779855e-53 | -8.615850e-47 |
| Msa0093400 | Msa0152430 | 0.811974 | 5.353148e-51 | -8.615850e-47 |
| Msa0094130 | Msa0152430 | 0.818122 | 2.311411e-52 | -8.615850e-47 |
| Msa0094140 | Msa0152430 | 0.816961 | 4.222573e-52 | -8.615850e-47 |
| Msa0101810 | Msa0152430 | -0.813161 | 2.945153e-51 | -8.615850e-47 |
| Msa0110970 | Msa0152430 | 0.830431 | 2.948321e-55 | -8.615850e-47 |
| Msa0115000 | Msa0152430 | 0.880078 | 7.381185e-70 | -8.615850e-47 |
| Msa0125090 | Msa0152430 | 0.807362 | 5.245786e-50 | -8.615850e-47 |
| Msa0131900 | Msa0152430 | 0.807461 | 4.997818e-50 | -8.615850e-47 |
| Msa0139060 | Msa0152430 | 0.814594 | 1.422906e-51 | -8.615850e-47 |
| Msa0140780 | Msa0152430 | 0.805087 | 1.581373e-49 | -8.615850e-47 |
| Msa0142200 | Msa0152430 | 0.820606 | 6.275490e-53 | -8.615850e-47 |
| Msa0152400 | Msa0152430 | 0.812892 | 3.373516e-51 | -8.615850e-47 |
| Msa0152430 | Msa0153680 | 0.805866 | 1.085540e-49 | -8.615850e-47 |
| Msa0152430 | Msa0157290 | 0.851717 | 7.396746e-61 | -8.615850e-47 |
| Msa0152430 | Msa0165210 | 0.802497 | 5.454105e-49 | -8.615850e-47 |
| Msa0152430 | Msa0166870 | 0.802171 | 6.366850e-49 | -8.615850e-47 |
| Msa0152430 | Msa0173660 | 0.819989 | 8.694285e-53 | -8.615850e-47 |
| Msa0152430 | Msa0173990 | 0.819046 | 1.426496e-52 | -8.615850e-47 |
| Msa0152430 | Msa0191250 | 0.805098 | 1.572634e-49 | -8.615850e-47 |
| Msa0152430 | Msa0200260 | 0.810587 | 1.070202e-50 | -8.615850e-47 |
| Msa0152430 | Msa0212310 | 0.829613 | 4.666362e-55 | -8.615850e-47 |
| Msa0152430 | Msa0212990 | 0.813345 | 2.682408e-51 | -8.615850e-47 |
| Msa0152430 | Msa0213520 | 0.807116 | 5.914488e-50 | -8.615850e-47 |
| Msa0152430 | Msa0217400 | 0.801100 | 1.055669e-48 | -8.615850e-47 |
| Msa0152430 | Msa0220290 | -0.803562 | 3.285906e-49 | -8.615850e-47 |
| Msa0152430 | Msa0220740 | 0.820208 | 7.742478e-53 | -8.615850e-47 |
| Msa0152430 | Msa0221060 | 0.808787 | 2.608628e-50 | -8.615850e-47 |
| Msa0152430 | Msa0221290 | 0.808410 | 3.139986e-50 | -8.615850e-47 |
| Msa0152430 | Msa0225320 | 0.825333 | 4.963810e-54 | -8.615850e-47 |
| Msa0152430 | Msa0225460 | 0.823639 | 1.243110e-53 | -8.615850e-47 |
| Msa0152430 | Msa0225680 | 0.823476 | 1.357324e-53 | -8.615850e-47 |
| Msa0152430 | Msa0225750 | 0.805995 | 1.019574e-49 | -8.615850e-47 |
| Msa0152430 | Msa0225760 | 0.811550 | 6.618487e-51 | -8.615850e-47 |
| Msa0152430 | Msa0227470 | 0.831237 | 1.870606e-55 | -8.615850e-47 |
| Msa0152430 | Msa0237310 | 0.801014 | 1.099687e-48 | -8.615850e-47 |
| Msa0152430 | Msa0240110 | 0.817212 | 3.708066e-52 | -8.615850e-47 |
| Msa0152430 | Msa0240150 | 0.809582 | 1.761823e-50 | -8.615850e-47 |
| Msa0152430 | Msa0243100 | 0.832457 | 9.352309e-56 | -8.615850e-47 |
| Msa0152430 | Msa0244860 | 0.835742 | 1.405963e-56 | -8.615850e-47 |
| Msa0152430 | Msa0248970 | 0.810305 | 1.231163e-50 | -8.615850e-47 |
| Msa0152430 | Msa0260610 | 0.805809 | 1.115828e-49 | -8.615850e-47 |
| Msa0152430 | Msa0260670 | 0.810922 | 9.059103e-51 | -8.615850e-47 |
| Msa0152430 | Msa0261340 | 0.828856 | 7.124277e-55 | -8.615850e-47 |
| Msa0152430 | Msa0262510 | 0.809849 | 1.543768e-50 | -8.615850e-47 |
| Msa0152430 | Msa0283450 | 0.848643 | 5.377818e-60 | -8.615850e-47 |
| Msa0152430 | Msa0283520 | 0.834312 | 3.223439e-56 | -8.615850e-47 |
| Msa0152430 | Msa0284420 | 0.802272 | 6.068969e-49 | -8.615850e-47 |
| Msa0152430 | Msa0284520 | 0.804248 | 2.366716e-49 | -8.615850e-47 |
| Msa0152430 | Msa0287650 | 0.822743 | 2.012107e-53 | -8.615850e-47 |
| Msa0152430 | Msa0296560 | 0.821401 | 4.117504e-53 | -8.615850e-47 |
| Msa0152430 | Msa0302000 | 0.807653 | 4.551164e-50 | -8.615850e-47 |
| Msa0152430 | Msa0317510 | 0.801108 | 1.051922e-48 | -8.615850e-47 |
| Msa0152430 | Msa0317730 | 0.804118 | 2.518883e-49 | -8.615850e-47 |
| Msa0152430 | Msa0317740 | 0.809935 | 1.479226e-50 | -8.615850e-47 |
| Msa0152430 | Msa0322690 | 0.810013 | 1.423503e-50 | -8.615850e-47 |
| Msa0152430 | Msa0323610 | 0.801393 | 9.197683e-49 | -8.615850e-47 |
| Msa0152430 | Msa0330340 | 0.802682 | 4.995794e-49 | -8.615850e-47 |
| Msa0152430 | Msa0332000 | 0.842472 | 2.532260e-58 | -8.615850e-47 |
| Msa0152430 | Msa0335040 | 0.823731 | 1.183054e-53 | -8.615850e-47 |
| Msa0152430 | Msa0338110 | 0.822884 | 1.865157e-53 | -8.615850e-47 |
| Msa0152430 | Msa0340090 | 0.816669 | 4.909929e-52 | -8.615850e-47 |
| Msa0152430 | Msa0340450 | 0.806634 | 7.479101e-50 | -8.615850e-47 |
| Msa0152430 | Msa0341540 | 0.805771 | 1.136268e-49 | -8.615850e-47 |
| Msa0152430 | Msa0341910 | 0.809612 | 1.736457e-50 | -8.615850e-47 |
| Msa0152430 | Msa0345970 | 0.809131 | 2.201739e-50 | -8.615850e-47 |
| Msa0152430 | Msa0351380 | 0.812120 | 4.973415e-51 | -8.615850e-47 |
| Msa0152430 | Msa0363200 | 0.807360 | 5.250747e-50 | -8.615850e-47 |
| Msa0152430 | Msa0369850 | 0.826614 | 2.462920e-54 | -8.615850e-47 |
| Msa0152430 | Msa0376350 | 0.844231 | 8.594391e-59 | -8.615850e-47 |
| Msa0152430 | Msa0380740 | 0.805633 | 1.214819e-49 | -8.615850e-47 |
| Msa0152430 | Msa0388960 | 0.846372 | 2.263455e-59 | -8.615850e-47 |
| Msa0152430 | Msa0389340 | 0.819373 | 1.201557e-52 | -8.615850e-47 |
| Msa0152430 | Msa0392510 | 0.803632 | 3.177695e-49 | -8.615850e-47 |
| Msa0152430 | Msa0393080 | 0.811409 | 7.102994e-51 | -8.615850e-47 |
| Msa0152430 | Msa0395790 | 0.805699 | 1.176679e-49 | -8.615850e-47 |
| Msa0152430 | Msa0397150 | 0.802666 | 5.035308e-49 | -8.615850e-47 |
| Msa0152430 | Msa0399300 | 0.810457 | 1.141545e-50 | -8.615850e-47 |
| Msa0152430 | Msa0407780 | 0.816046 | 6.766733e-52 | -8.615850e-47 |
| Msa0152430 | Msa0407910 | 0.814811 | 1.274129e-51 | -8.615850e-47 |
| Msa0152430 | Msa0407920 | 0.818367 | 2.033642e-52 | -8.615850e-47 |
| Msa0152430 | Msa0410500 | 0.822470 | 2.328765e-53 | -8.615850e-47 |
| Msa0152430 | Msa0410650 | 0.837954 | 3.831708e-57 | -8.615850e-47 |
| Msa0152430 | Msa0417880 | 0.840070 | 1.084897e-57 | -8.615850e-47 |
| Msa0152430 | Msa0422280 | 0.801826 | 7.497673e-49 | -8.615850e-47 |
| Msa0152430 | Msa0422850 | 0.811381 | 7.203307e-51 | -8.615850e-47 |
| Msa0152430 | Msa0422930 | 0.814076 | 1.852289e-51 | -8.615850e-47 |
| Msa0152430 | Msa0424790 | 0.835643 | 1.489229e-56 | -8.615850e-47 |
| Msa0152430 | Msa0428080 | 0.821803 | 3.324404e-53 | -8.615850e-47 |
| Msa0152430 | Msa0432300 | 0.808686 | 2.742196e-50 | -8.615850e-47 |
| Msa0152430 | Msa0437560 | 0.812483 | 4.144339e-51 | -8.615850e-47 |
| Msa0152430 | Msa0439970 | 0.807120 | 5.904230e-50 | -8.615850e-47 |
| Msa0152430 | Msa0440750 | 0.800432 | 1.445061e-48 | -8.615850e-47 |
| Msa0152430 | Msa0452920 | 0.837352 | 5.469387e-57 | -8.615850e-47 |
| Msa0152430 | Msa0452960 | 0.806206 | 9.206595e-50 | -8.615850e-47 |
| Msa0152430 | Msa0464380 | 0.820327 | 7.272943e-53 | -8.615850e-47 |
| Msa0152430 | Msa0466390 | 0.800982 | 1.116302e-48 | -8.615850e-47 |
| Msa0152430 | Msa0467430 | 0.831533 | 1.581632e-55 | -8.615850e-47 |
| Msa0152430 | Msa0468290 | 0.813748 | 2.187384e-51 | -8.615850e-47 |
| Msa0152430 | Msa0469160 | 0.812991 | 3.208017e-51 | -8.615850e-47 |
| Msa0152430 | Msa0483650 | 0.802167 | 6.379707e-49 | -8.615850e-47 |
| Msa0152430 | Msa0484650 | 0.802305 | 5.975583e-49 | -8.615850e-47 |
| Msa0152430 | Msa0484780 | 0.836726 | 7.902942e-57 | -8.615850e-47 |
| Msa0152430 | Msa0488560 | 0.839411 | 1.610238e-57 | -8.615850e-47 |
| Msa0152430 | Msa0490730 | -0.818971 | 1.483774e-52 | -8.615850e-47 |
| Msa0152430 | Msa0495320 | 0.804803 | 1.812572e-49 | -8.615850e-47 |
| Msa0152430 | Msa0498060 | 0.800917 | 1.150833e-48 | -8.615850e-47 |
| Msa0152430 | Msa0503060 | 0.806286 | 8.855978e-50 | -8.615850e-47 |
| Msa0152430 | Msa0507680 | 0.838233 | 3.247495e-57 | -8.615850e-47 |
| Msa0152430 | Msa0509610 | 0.824855 | 6.437960e-54 | -8.615850e-47 |
| Msa0152430 | Msa0512900 | 0.823035 | 1.720145e-53 | -8.615850e-47 |
| Msa0152430 | Msa0516170 | 0.831714 | 1.427176e-55 | -8.615850e-47 |
| Msa0152430 | Msa0524190 | 0.801860 | 7.376730e-49 | -8.615850e-47 |
| Msa0152430 | Msa0533070 | 0.802202 | 6.274161e-49 | -8.615850e-47 |
| Msa0152430 | Msa0545210 | 0.841575 | 4.371500e-58 | -8.615850e-47 |
| Msa0152430 | Msa0546680 | 0.852391 | 4.759353e-61 | -8.615850e-47 |
| Msa0152430 | Msa0563840 | 0.808174 | 3.524975e-50 | -8.615850e-47 |
| Msa0152430 | Msa0569200 | 0.811608 | 6.430333e-51 | -8.615850e-47 |
| Msa0152430 | Msa0574890 | 0.828178 | 1.038441e-54 | -8.615850e-47 |
| Msa0152430 | Msa0581050 | 0.811381 | 7.202281e-51 | -8.615850e-47 |
| Msa0152430 | Msa0602240 | 0.814249 | 1.695734e-51 | -8.615850e-47 |
| Msa0152430 | Msa0602250 | 0.812209 | 4.755885e-51 | -8.615850e-47 |
| Msa0152430 | Msa0620790 | 0.800964 | 1.125698e-48 | -8.615850e-47 |
| Msa0152430 | Msa0623080 | 0.801619 | 8.266154e-49 | -8.615850e-47 |
| Msa0152430 | Msa0625190 | 0.817757 | 2.794431e-52 | -8.615850e-47 |
| Msa0152430 | Msa0625720 | 0.800471 | 1.419330e-48 | -8.615850e-47 |
| Msa0152430 | Msa0626280 | 0.833629 | 4.779063e-56 | -8.615850e-47 |
| Msa0152430 | Msa0633700 | 0.806625 | 7.512889e-50 | -8.615850e-47 |
| Msa0152430 | Msa0639430 | 0.816607 | 5.067739e-52 | -8.615850e-47 |
| Msa0152430 | Msa0648880 | 0.801354 | 9.367855e-49 | -8.615850e-47 |
| Msa0152430 | Msa0655560 | 0.801429 | 9.040324e-49 | -8.615850e-47 |
| Msa0152430 | Msa0657970 | 0.843320 | 1.506306e-58 | -8.615850e-47 |
| Msa0152430 | Msa0664570 | 0.805361 | 1.385363e-49 | -8.615850e-47 |
| Msa0152430 | Msa0682330 | 0.831513 | 1.599479e-55 | -8.615850e-47 |
| Msa0152430 | Msa0682550 | 0.834460 | 2.959741e-56 | -8.615850e-47 |
| Msa0152430 | Msa0685750 | 0.816261 | 6.058162e-52 | -8.615850e-47 |
| Msa0152430 | Msa0692230 | 0.803148 | 4.002734e-49 | -8.615850e-47 |
| Msa0152430 | Msa0693380 | 0.833642 | 4.743237e-56 | -8.615850e-47 |
| Msa0152430 | Msa0702680 | 0.801304 | 9.590011e-49 | -8.615850e-47 |
| Msa0152430 | Msa0723990 | 0.825318 | 5.005349e-54 | -8.615850e-47 |
| Msa0152430 | Msa0724210 | 0.800204 | 1.607928e-48 | -8.615850e-47 |
| Msa0152430 | Msa0727710 | 0.807617 | 4.630487e-50 | -8.615850e-47 |
| Msa0152430 | Msa0737570 | 0.817296 | 3.549940e-52 | -8.615850e-47 |
| Msa0152430 | Msa0745790 | 0.801435 | 9.016603e-49 | -8.615850e-47 |
| Msa0152430 | Msa0754520 | 0.805294 | 1.430636e-49 | -8.615850e-47 |
| Msa0152430 | Msa0760130 | 0.800453 | 1.431389e-48 | -8.615850e-47 |
| Msa0152430 | Msa0764570 | 0.820805 | 5.648723e-53 | -8.615850e-47 |
| Msa0152430 | Msa0777930 | 0.801288 | 9.663977e-49 | -8.615850e-47 |
| Msa0152430 | Msa0779330 | 0.825669 | 4.131461e-54 | -8.615850e-47 |
| Msa0152430 | Msa0795560 | 0.816250 | 6.090858e-52 | -8.615850e-47 |
| Msa0152430 | Msa0816710 | 0.811422 | 7.058774e-51 | -8.615850e-47 |
| Msa0152430 | Msa0824660 | 0.811653 | 6.288038e-51 | -8.615850e-47 |
| Msa0152430 | Msa0828540 | 0.805121 | 1.555534e-49 | -8.615850e-47 |
| Msa0152430 | Msa0828560 | 0.810289 | 1.241359e-50 | -8.615850e-47 |
| Msa0152430 | Msa0832320 | 0.821756 | 3.408991e-53 | -8.615850e-47 |
| Msa0152430 | Msa0833220 | 0.804324 | 2.281210e-49 | -8.615850e-47 |
| Msa0152430 | Msa0844240 | 0.801413 | 9.108980e-49 | -8.615850e-47 |
| Msa0152430 | Msa0844570 | 0.801573 | 8.447424e-49 | -8.615850e-47 |
| Msa0152430 | Msa0856920 | 0.821534 | 3.836176e-53 | -8.615850e-47 |
| Msa0152430 | Msa0858840 | 0.810204 | 1.294523e-50 | -8.615850e-47 |
| Msa0152430 | Msa0861510 | 0.805290 | 1.433452e-49 | -8.615850e-47 |
| Msa0152430 | Msa0861600 | 0.810570 | 1.079266e-50 | -8.615850e-47 |
| Msa0152430 | Msa0863930 | 0.810046 | 1.400049e-50 | -8.615850e-47 |
| Msa0152430 | Msa0867890 | 0.816942 | 4.264008e-52 | -8.615850e-47 |
| Msa0152430 | Msa0880140 | 0.848468 | 6.013894e-60 | -8.615850e-47 |
| Msa0152430 | Msa0880950 | 0.807664 | 4.526264e-50 | -8.615850e-47 |
| Msa0152430 | Msa0896540 | 0.802399 | 5.713741e-49 | -8.615850e-47 |
| Msa0152430 | Msa0896750 | 0.815675 | 8.188373e-52 | -8.615850e-47 |
| Msa0152430 | Msa0903690 | 0.802322 | 5.926803e-49 | -8.615850e-47 |
| Msa0152430 | Msa0908050 | 0.830664 | 2.584926e-55 | -8.615850e-47 |
| Msa0152430 | Msa0909120 | 0.857199 | 1.920168e-62 | -8.615850e-47 |
| Msa0152430 | Msa0909140 | 0.825631 | 4.218498e-54 | -8.615850e-47 |
| Msa0152430 | Msa0923010 | 0.806996 | 6.271944e-50 | -8.615850e-47 |
| Msa0152430 | Msa0926890 | 0.825406 | 4.769089e-54 | -8.615850e-47 |
| Msa0152430 | Msa0930780 | 0.810904 | 9.138906e-51 | -8.615850e-47 |
| Msa0152430 | Msa0952120 | 0.806823 | 6.823247e-50 | -8.615850e-47 |
| Msa0152430 | Msa0954130 | 0.816671 | 4.904581e-52 | -8.615850e-47 |
| Msa0152430 | Msa0954550 | 0.815640 | 8.336246e-52 | -8.615850e-47 |
| Msa0152430 | Msa0969520 | 0.805937 | 1.048862e-49 | -8.615850e-47 |
| Msa0152430 | Msa0973160 | 0.800389 | 1.474607e-48 | -8.615850e-47 |
| Msa0152430 | Msa0980310 | 0.810521 | 1.106303e-50 | -8.615850e-47 |
| Msa0152430 | Msa0990350 | 0.811993 | 5.300498e-51 | -8.615850e-47 |
| Msa0152430 | Msa1003750 | 0.815550 | 8.728738e-52 | -8.615850e-47 |
| Msa0152430 | Msa1004800 | 0.810443 | 1.149903e-50 | -8.615850e-47 |
| Msa0152430 | Msa1007270 | 0.817418 | 3.331342e-52 | -8.615850e-47 |
| Msa0152430 | Msa1019000 | 0.830258 | 3.248947e-55 | -8.615850e-47 |
| Msa0152430 | Msa1019150 | 0.818458 | 1.939737e-52 | -8.615850e-47 |
| Msa0152430 | Msa1027630 | 0.806921 | 6.504698e-50 | -8.615850e-47 |
| Msa0152430 | Msa1029250 | 0.803779 | 2.962364e-49 | -8.615850e-47 |
| Msa0152430 | Msa1030970 | 0.818354 | 2.047544e-52 | -8.615850e-47 |
| Msa0152430 | Msa1045200 | 0.802677 | 5.007964e-49 | -8.615850e-47 |
| Msa0152430 | Msa1047080 | 0.805935 | 1.049586e-49 | -8.615850e-47 |
| Msa0152430 | Msa1052830 | 0.804355 | 2.248468e-49 | -8.615850e-47 |
| Msa0152430 | Msa1081330 | 0.830085 | 3.581480e-55 | -8.615850e-47 |
| Msa0152430 | Msa1082500 | 0.852435 | 4.624907e-61 | -8.615850e-47 |
| Msa0152430 | Msa1085200 | 0.833717 | 4.543290e-56 | -8.615850e-47 |
| Msa0152430 | Msa1085300 | 0.803657 | 3.140370e-49 | -8.615850e-47 |
| Msa0152430 | Msa1089940 | 0.811803 | 5.831125e-51 | -8.615850e-47 |
| Msa0152430 | Msa1104000 | 0.817900 | 2.594234e-52 | -8.615850e-47 |
| Msa0152430 | Msa1108160 | 0.826949 | 2.048271e-54 | -8.615850e-47 |
| Msa0152430 | Msa1111110 | 0.824517 | 7.732992e-54 | -8.615850e-47 |
| Msa0152430 | Msa1122520 | 0.803092 | 4.111917e-49 | -8.615850e-47 |
| Msa0152430 | Msa1147740 | 0.811738 | 6.024982e-51 | -8.615850e-47 |
| Msa0152430 | Msa1151910 | 0.841558 | 4.419104e-58 | -8.615850e-47 |
| Msa0152430 | Msa1154710 | 0.814310 | 1.644327e-51 | -8.615850e-47 |
| Msa0152430 | Msa1158310 | 0.811225 | 7.787102e-51 | -8.615850e-47 |
| Msa0152430 | Msa1165520 | 0.816288 | 5.973998e-52 | -8.615850e-47 |
| Msa0152430 | Msa1170440 | 0.808069 | 3.711427e-50 | -8.615850e-47 |
| Msa0152430 | Msa1172670 | 0.815233 | 1.026630e-51 | -8.615850e-47 |
| Msa0152430 | Msa1179120 | 0.813791 | 2.140432e-51 | -8.615850e-47 |
| Msa0152430 | Msa1179280 | 0.800891 | 1.165094e-48 | -8.615850e-47 |
| Msa0152430 | Msa1179940 | 0.842547 | 2.419525e-58 | -8.615850e-47 |
| Msa0152430 | Msa1179970 | 0.839915 | 1.191063e-57 | -8.615850e-47 |
| Msa0152430 | Msa1186060 | 0.815931 | 7.179421e-52 | -8.615850e-47 |
| Msa0152430 | Msa1192990 | 0.815935 | 7.165327e-52 | -8.615850e-47 |
| Msa0152430 | Msa1199570 | 0.812926 | 3.315443e-51 | -8.615850e-47 |
| Msa0152430 | Msa1209460 | 0.812645 | 3.819262e-51 | -8.615850e-47 |
| Msa0152430 | Msa1228210 | 0.804560 | 2.037233e-49 | -8.615850e-47 |
| Msa0152430 | Msa1229600 | 0.805838 | 1.099973e-49 | -8.615850e-47 |
| Msa0152430 | Msa1238470 | 0.828583 | 8.295542e-55 | -8.615850e-47 |
| Msa0152430 | Msa1239920 | 0.802514 | 5.410476e-49 | -8.615850e-47 |
| Msa0152430 | Msa1242220 | 0.818383 | 2.016918e-52 | -8.615850e-47 |
| Msa0152430 | Msa1249490 | 0.804475 | 2.122425e-49 | -8.615850e-47 |
| Msa0152430 | Msa1269480 | 0.840042 | 1.103325e-57 | -8.615850e-47 |
| Msa0152430 | Msa1270610 | 0.811641 | 6.324533e-51 | -8.615850e-47 |
| Msa0152430 | Msa1271300 | 0.813841 | 2.086468e-51 | -8.615850e-47 |
| Msa0152430 | Msa1276530 | 0.800297 | 1.539532e-48 | -8.615850e-47 |
| Msa0152430 | Msa1278840 | 0.835612 | 1.516018e-56 | -8.615850e-47 |
| Msa0152430 | Msa1283860 | 0.827054 | 1.933234e-54 | -8.615850e-47 |
| Msa0152430 | Msa1287440 | 0.830130 | 3.492818e-55 | -8.615850e-47 |
| Msa0152430 | Msa1289280 | 0.808278 | 3.349523e-50 | -8.615850e-47 |
| Msa0152430 | Msa1297290 | 0.807753 | 4.332942e-50 | -8.615850e-47 |
| Msa0152430 | Msa1298820 | 0.800807 | 1.212045e-48 | -8.615850e-47 |
| Msa0152430 | Msa1302830 | 0.811199 | 7.890190e-51 | -8.615850e-47 |
| Msa0152430 | Msa1308380 | 0.839963 | 1.156765e-57 | -8.615850e-47 |
| Msa0152430 | Msa1308620 | 0.801674 | 8.054313e-49 | -8.615850e-47 |
| Msa0152430 | Msa1313150 | 0.846151 | 2.600896e-59 | -8.615850e-47 |
| Msa0152430 | Msa1314170 | 0.827616 | 1.417957e-54 | -8.615850e-47 |
| Msa0152430 | Msa1314340 | 0.810497 | 1.119142e-50 | -8.615850e-47 |
| Msa0152430 | Msa1318240 | 0.811125 | 8.186886e-51 | -8.615850e-47 |
| Msa0152430 | Msa1320740 | 0.801945 | 7.084585e-49 | -8.615850e-47 |
| Msa0152430 | Msa1322890 | 0.831131 | 1.986415e-55 | -8.615850e-47 |
| Msa0152430 | Msa1324500 | 0.823309 | 1.484297e-53 | -8.615850e-47 |
| Msa0152430 | Msa1324550 | 0.803814 | 2.913240e-49 | -8.615850e-47 |
| Msa0152430 | Msa1327050 | 0.805509 | 1.289627e-49 | -8.615850e-47 |
| Msa0152430 | Msa1328710 | 0.808560 | 2.916790e-50 | -8.615850e-47 |
| Msa0152430 | Msa1331000 | 0.818620 | 1.782295e-52 | -8.615850e-47 |
| Msa0152430 | Msa1332000 | 0.834051 | 3.748195e-56 | -8.615850e-47 |
| Msa0152430 | Msa1355800 | 0.810303 | 1.232886e-50 | -8.615850e-47 |
| Msa0152430 | Msa1359040 | 0.803159 | 3.982729e-49 | -8.615850e-47 |
| Msa0152430 | Msa1360060 | 0.832743 | 7.942253e-56 | -8.615850e-47 |
| Msa0152430 | Msa1366600 | 0.805247 | 1.464000e-49 | -8.615850e-47 |
| Msa0152430 | Msa1367370 | 0.805350 | 1.392625e-49 | -8.615850e-47 |
| Msa0152430 | Msa1372760 | 0.841624 | 4.244829e-58 | -8.615850e-47 |
| Msa0152430 | Msa1378760 | 0.802887 | 4.531846e-49 | -8.615850e-47 |
| Msa0152430 | Msa1384350 | 0.822188 | 2.706952e-53 | -8.615850e-47 |
| Msa0152430 | Msa1385000 | 0.807095 | 5.974350e-50 | -8.615850e-47 |
| Msa0152430 | Msa1392260 | 0.815226 | 1.030657e-51 | -8.615850e-47 |
| Msa0152430 | Msa1393410 | 0.811061 | 8.451487e-51 | -8.615850e-47 |
| Msa0152430 | Msa1398340 | 0.822453 | 2.349503e-53 | -8.615850e-47 |
| Msa0152430 | Msa1402400 | 0.805739 | 1.154170e-49 | -8.615850e-47 |
| Msa0152430 | Msa1409700 | 0.809343 | 1.983373e-50 | -8.615850e-47 |
| Msa0152430 | Msa1409870 | 0.846062 | 2.749220e-59 | -8.615850e-47 |
| Msa0152430 | Msa1422420 | 0.830725 | 2.498122e-55 | -8.615850e-47 |
| Msa0152430 | Msa1423880 | 0.839452 | 1.571521e-57 | -8.615850e-47 |
| Msa0152430 | Msa1424680 | 0.813868 | 2.058809e-51 | -8.615850e-47 |
| Msa0152430 | Msa1429900 | 0.803258 | 3.797681e-49 | -8.615850e-47 |
| Msa0152430 | Msa1431430 | 0.802503 | 5.440922e-49 | -8.615850e-47 |
| Msa0152430 | Msa1435420 | 0.807934 | 3.966232e-50 | -8.615850e-47 |
| Msa0152430 | Msa1436480 | 0.803720 | 3.046907e-49 | -8.615850e-47 |
| Msa0152430 | Msa1438250 | 0.820919 | 5.317630e-53 | -8.615850e-47 |
| Msa0152430 | Msa1443110 | 0.806993 | 6.278754e-50 | -8.615850e-47 |
| Msa0152430 | Msa1452120 | 0.816302 | 5.931054e-52 | -8.615850e-47 |
| Msa0152430 | Msa1455460 | 0.803744 | 3.012475e-49 | -8.615850e-47 |
| Msa0152430 | Msa1460020 | 0.827879 | 1.226197e-54 | -8.615850e-47 |
| Msa0152430 | Msa1466540 | 0.803563 | 3.283420e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0152430 | MtrunA17_Chr1g0161491 | 93.750 | 176 | 11 | 0 | 1 | 176 | 15 | 190 | 4.84e-113 | 347 |
| Msa0152430 | MtrunA17_Chr1g0161521 | 70.352 | 199 | 52 | 3 | 1 | 192 | 1 | 199 | 9.81e-85 | 270 |
| Msa0152430 | MtrunA17_Chr1g0161511 | 69.154 | 201 | 54 | 4 | 1 | 194 | 1 | 200 | 6.60e-83 | 265 |
| Msa0152430 | MtrunA17_Chr1g0161471 | 70.950 | 179 | 49 | 2 | 1 | 176 | 1 | 179 | 1.85e-79 | 256 |
| Msa0152430 | MtrunA17_Chr1g0161451 | 34.104 | 173 | 112 | 2 | 4 | 175 | 2 | 173 | 1.86e-26 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0152430 | AT1G14790.1 | 49.133 | 173 | 86 | 2 | 5 | 176 | 3 | 174 | 2.36e-52 | 180 |
Find 52 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACGATGTTAAACTGTATTT+TGG | 0.159141 | 1_4:+15041556 | Msa0152430:CDS |
| TTGACATTGACGCAATATTT+AGG | 0.159956 | 1_4:+15040645 | Msa0152430:five_prime_UTR |
| GTGGATGCTAGTGTAGATTT+TGG | 0.172622 | 1_4:+15041619 | Msa0152430:CDS |
| AGCTTTCATATGAGAATATT+TGG | 0.191630 | 1_4:+15041701 | Msa0152430:CDS |
| GGAACTCCTATTTAAAAGTT+AGG | 0.218706 | 1_4:+15041482 | Msa0152430:CDS |
| ACAATTCACTTGAAATAGTT+TGG | 0.233189 | 1_4:+15040597 | Msa0152430:five_prime_UTR |
| TCCAAAGCCAAGGGCATTCT+TGG | 0.267359 | 1_4:+15041525 | Msa0152430:CDS |
| TGCAAAGTATCTATTGATTC+AGG | 0.268018 | 1_4:+15041756 | Msa0152430:CDS |
| AGGAAAGATTCTCTATATTA+TGG | 0.268444 | 1_4:+15041593 | Msa0152430:CDS |
| GTCCCCTTTATTTATTGTAT+TGG | 0.275365 | 1_4:+15040552 | None:intergenic |
| TTTATTTATTGTATTGGAAT+TGG | 0.288281 | 1_4:+15040558 | Msa0152430:five_prime_UTR |
| AATTCCAATACAATAAATAA+AGG | 0.296363 | 1_4:-15040556 | None:intergenic |
| TCCAAGAATGCCCTTGGCTT+TGG | 0.307615 | 1_4:-15041526 | None:intergenic |
| CAATTCACTTGAAATAGTTT+GGG | 0.318375 | 1_4:+15040598 | Msa0152430:five_prime_UTR |
| TGACATTGACGCAATATTTA+GGG | 0.320741 | 1_4:+15040646 | Msa0152430:five_prime_UTR |
| ACCATTGTTCATAATTCATA+TGG | 0.333704 | 1_4:-15041906 | None:intergenic |
| AGTAAAACAATTGAGTTGTA+TGG | 0.346819 | 1_4:+15041265 | Msa0152430:CDS |
| CTTGAAATAGTTTGGGGAAG+TGG | 0.350279 | 1_4:+15040605 | Msa0152430:five_prime_UTR |
| TGAATAATTGCAAATGCTCT+TGG | 0.351532 | 1_4:-15041394 | None:intergenic |
| GCAGAAATAAATTGCGGTTC+GGG | 0.358856 | 1_4:+15041461 | Msa0152430:CDS |
| ATTCCAATACAATAAATAAA+GGG | 0.376783 | 1_4:-15040555 | None:intergenic |
| AGCAGAAATAAATTGCGGTT+CGG | 0.414372 | 1_4:+15041460 | Msa0152430:CDS |
| CTATTTAAAAGTTAGGGAAA+TGG | 0.416320 | 1_4:+15041489 | Msa0152430:CDS |
| ATATTTGTAGAGCATTATAC+TGG | 0.432174 | 1_4:+15041322 | Msa0152430:CDS |
| TGAGACACGTTCACAAAAGA+AGG | 0.445945 | 1_4:-15041292 | None:intergenic |
| GAACTCCTATTTAAAAGTTA+GGG | 0.447970 | 1_4:+15041483 | Msa0152430:CDS |
| CAATTTATTTCTGCTAGGTA+AGG | 0.480562 | 1_4:-15041452 | None:intergenic |
| TTGGGATTGGTATGAGAAAG+TGG | 0.485612 | 1_4:+15041638 | Msa0152430:CDS |
| TGTTTAAATCATTCAATGAA+AGG | 0.495154 | 1_4:-15041792 | None:intergenic |
| TCTTCTTCCTCAAAATCTCT+CGG | 0.506168 | 1_4:+15040692 | Msa0152430:five_prime_UTR |
| GGAAGAAGAAAGTGAAAGAG+AGG | 0.506844 | 1_4:-15040678 | None:intergenic |
| TCGGTCATCGTCATCATCAT+CGG | 0.534549 | 1_4:+15040711 | Msa0152430:five_prime_UTR |
| GATTGAGCTGCATCAACCAC+AGG | 0.538892 | 1_4:+15041726 | Msa0152430:CDS |
| AAACTGTCCAAGAATGCCCT+TGG | 0.565377 | 1_4:-15041532 | None:intergenic |
| GTAGAGCATTATACTGGTGA+AGG | 0.567027 | 1_4:+15041328 | Msa0152430:CDS |
| ATTCTCTATATTATGGAAGG+TGG | 0.569959 | 1_4:+15041600 | Msa0152430:CDS |
| AAGATTCTCTATATTATGGA+AGG | 0.592994 | 1_4:+15041597 | Msa0152430:CDS |
| AAAACATGCTACATTCATGA+TGG | 0.594459 | 1_4:+15041429 | Msa0152430:CDS |
| TTCCAATACAATAAATAAAG+GGG | 0.602510 | 1_4:-15040554 | None:intergenic |
| GTTGCTATGAAGATTAGAGT+AGG | 0.605906 | 1_4:+15041358 | Msa0152430:CDS |
| GAGATATTGATCCAAAGCCA+AGG | 0.607190 | 1_4:+15041515 | Msa0152430:CDS |
| AACCGCAATTTATTTCTGCT+AGG | 0.621853 | 1_4:-15041457 | None:intergenic |
| TACCTAGCAGAAATAAATTG+CGG | 0.630732 | 1_4:+15041455 | Msa0152430:CDS |
| GAGACACGTTCACAAAAGAA+GGG | 0.638551 | 1_4:-15041291 | None:intergenic |
| AGATATTGATCCAAAGCCAA+GGG | 0.640291 | 1_4:+15041516 | Msa0152430:CDS |
| ATATGAATTATGAACAATGG+TGG | 0.643067 | 1_4:+15041908 | Msa0152430:three_prime_UTR |
| ATGAAGATTAGAGTAGGCAA+AGG | 0.643746 | 1_4:+15041364 | Msa0152430:CDS |
| AATTCACTTGAAATAGTTTG+GGG | 0.644524 | 1_4:+15040599 | Msa0152430:five_prime_UTR |
| GGAAAGATTCATGAATGACA+TGG | 0.648184 | 1_4:+15041994 | Msa0152430:three_prime_UTR |
| TCCATATGAATTATGAACAA+TGG | 0.662687 | 1_4:+15041905 | Msa0152430:three_prime_UTR |
| ATTGAGCTGCATCAACCACA+GGG | 0.682058 | 1_4:+15041727 | Msa0152430:CDS |
| TTATACTGGTGAAGGAAGTG+TGG | 0.711055 | 1_4:+15041336 | Msa0152430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGAATTTTTTTACTTTAAA+GGG | + | chr1_4:15040963-15040982 | Msa0152430:intron | 10.0% |
| !! | AGAAAAAAAATTGAAAAAAA+AGG | - | chr1_4:15041193-15041212 | None:intergenic | 10.0% |
| !!! | TTGAATTTTTTTACTTTAAA+GGG | + | chr1_4:15040963-15040982 | Msa0152430:intron | 10.0% |
| !! | AGAAAAAAAATTGAAAAAAA+AGG | - | chr1_4:15041193-15041212 | None:intergenic | 10.0% |
| !! | TTTATTTATTGTATTGGAAT+TGG | + | chr1_4:15040558-15040577 | Msa0152430:five_prime_UTR | 15.0% |
| !! | AAAAGGTTCATATATATAAA+TGG | - | chr1_4:15040758-15040777 | None:intergenic | 15.0% |
| !! | TGAAAATATAAAAAAAGTGA+AGG | - | chr1_4:15040889-15040908 | None:intergenic | 15.0% |
| !!! | ATTTTGTTTATTTTTGGATA+AGG | + | chr1_4:15040938-15040957 | Msa0152430:intron | 15.0% |
| !!! | GTTGAATTTTTTTACTTTAA+AGG | + | chr1_4:15040962-15040981 | Msa0152430:intron | 15.0% |
| !!! | GAATAATAAATGATTTTCTA+TGG | - | chr1_4:15041114-15041133 | None:intergenic | 15.0% |
| !! | TTTATTTATTGTATTGGAAT+TGG | + | chr1_4:15040558-15040577 | Msa0152430:five_prime_UTR | 15.0% |
| !! | AAAAGGTTCATATATATAAA+TGG | - | chr1_4:15040758-15040777 | None:intergenic | 15.0% |
| !! | TGAAAATATAAAAAAAGTGA+AGG | - | chr1_4:15040889-15040908 | None:intergenic | 15.0% |
| !!! | ATTTTGTTTATTTTTGGATA+AGG | + | chr1_4:15040938-15040957 | Msa0152430:intron | 15.0% |
| !!! | GTTGAATTTTTTTACTTTAA+AGG | + | chr1_4:15040962-15040981 | Msa0152430:intron | 15.0% |
| !!! | GAATAATAAATGATTTTCTA+TGG | - | chr1_4:15041114-15041133 | None:intergenic | 15.0% |
| !!! | TCCTCTATTTTGTTTATTTT+TGG | + | chr1_4:15040932-15040951 | Msa0152430:intron | 20.0% |
| !! | TCCAAAAATAAACAAAATAG+AGG | - | chr1_4:15040936-15040955 | None:intergenic | 20.0% |
| !!! | AAAGTGTTAAAATGCTTTTA+TGG | + | chr1_4:15041058-15041077 | Msa0152430:intron | 20.0% |
| !! | TGTTTAAATCATTCAATGAA+AGG | - | chr1_4:15041795-15041814 | None:intergenic | 20.0% |
| !!! | ATATCAAGAATGATTTTATC+AGG | + | chr1_4:15041973-15041992 | Msa0152430:three_prime_UTR | 20.0% |
| !!! | TCCTCTATTTTGTTTATTTT+TGG | + | chr1_4:15040932-15040951 | Msa0152430:intron | 20.0% |
| !! | TCCAAAAATAAACAAAATAG+AGG | - | chr1_4:15040936-15040955 | None:intergenic | 20.0% |
| !!! | AAAGTGTTAAAATGCTTTTA+TGG | + | chr1_4:15041058-15041077 | Msa0152430:intron | 20.0% |
| !! | TGTTTAAATCATTCAATGAA+AGG | - | chr1_4:15041795-15041814 | None:intergenic | 20.0% |
| !!! | ATATCAAGAATGATTTTATC+AGG | + | chr1_4:15041973-15041992 | Msa0152430:three_prime_UTR | 20.0% |
| ! | ACAATTCACTTGAAATAGTT+TGG | + | chr1_4:15040597-15040616 | Msa0152430:five_prime_UTR | 25.0% |
| ! | CAATTCACTTGAAATAGTTT+GGG | + | chr1_4:15040598-15040617 | Msa0152430:five_prime_UTR | 25.0% |
| ! | AATTCACTTGAAATAGTTTG+GGG | + | chr1_4:15040599-15040618 | Msa0152430:five_prime_UTR | 25.0% |
| !! | AGTAAAACAATTGAGTTGTA+TGG | + | chr1_4:15041265-15041284 | Msa0152430:CDS | 25.0% |
| !! | ATATTTGTAGAGCATTATAC+TGG | + | chr1_4:15041322-15041341 | Msa0152430:CDS | 25.0% |
| ! | GAACTCCTATTTAAAAGTTA+GGG | + | chr1_4:15041483-15041502 | Msa0152430:CDS | 25.0% |
| !! | CATTTCCCTAACTTTTAAAT+AGG | - | chr1_4:15041491-15041510 | None:intergenic | 25.0% |
| ! | CTATTTAAAAGTTAGGGAAA+TGG | + | chr1_4:15041489-15041508 | Msa0152430:CDS | 25.0% |
| ! | AGGAAAGATTCTCTATATTA+TGG | + | chr1_4:15041593-15041612 | Msa0152430:CDS | 25.0% |
| ! | AAGATTCTCTATATTATGGA+AGG | + | chr1_4:15041597-15041616 | Msa0152430:CDS | 25.0% |
| !!! | GTTTGAACTTCTTATTTTCA+TGG | - | chr1_4:15041678-15041697 | None:intergenic | 25.0% |
| ! | AGCTTTCATATGAGAATATT+TGG | + | chr1_4:15041701-15041720 | Msa0152430:CDS | 25.0% |
| ! | TCCATATGAATTATGAACAA+TGG | + | chr1_4:15041905-15041924 | Msa0152430:three_prime_UTR | 25.0% |
| ! | ACCATTGTTCATAATTCATA+TGG | - | chr1_4:15041909-15041928 | None:intergenic | 25.0% |
| ! | ATATGAATTATGAACAATGG+TGG | + | chr1_4:15041908-15041927 | Msa0152430:three_prime_UTR | 25.0% |
| ! | ACAATTCACTTGAAATAGTT+TGG | + | chr1_4:15040597-15040616 | Msa0152430:five_prime_UTR | 25.0% |
| ! | CAATTCACTTGAAATAGTTT+GGG | + | chr1_4:15040598-15040617 | Msa0152430:five_prime_UTR | 25.0% |
| ! | AATTCACTTGAAATAGTTTG+GGG | + | chr1_4:15040599-15040618 | Msa0152430:five_prime_UTR | 25.0% |
| !! | AGTAAAACAATTGAGTTGTA+TGG | + | chr1_4:15041265-15041284 | Msa0152430:CDS | 25.0% |
| !! | ATATTTGTAGAGCATTATAC+TGG | + | chr1_4:15041322-15041341 | Msa0152430:CDS | 25.0% |
| ! | GAACTCCTATTTAAAAGTTA+GGG | + | chr1_4:15041483-15041502 | Msa0152430:CDS | 25.0% |
| !! | CATTTCCCTAACTTTTAAAT+AGG | - | chr1_4:15041491-15041510 | None:intergenic | 25.0% |
| ! | CTATTTAAAAGTTAGGGAAA+TGG | + | chr1_4:15041489-15041508 | Msa0152430:CDS | 25.0% |
| ! | AGGAAAGATTCTCTATATTA+TGG | + | chr1_4:15041593-15041612 | Msa0152430:CDS | 25.0% |
| ! | AAGATTCTCTATATTATGGA+AGG | + | chr1_4:15041597-15041616 | Msa0152430:CDS | 25.0% |
| !!! | GTTTGAACTTCTTATTTTCA+TGG | - | chr1_4:15041678-15041697 | None:intergenic | 25.0% |
| ! | AGCTTTCATATGAGAATATT+TGG | + | chr1_4:15041701-15041720 | Msa0152430:CDS | 25.0% |
| ! | TCCATATGAATTATGAACAA+TGG | + | chr1_4:15041905-15041924 | Msa0152430:three_prime_UTR | 25.0% |
| ! | ACCATTGTTCATAATTCATA+TGG | - | chr1_4:15041909-15041928 | None:intergenic | 25.0% |
| ! | ATATGAATTATGAACAATGG+TGG | + | chr1_4:15041908-15041927 | Msa0152430:three_prime_UTR | 25.0% |
| TTGACATTGACGCAATATTT+AGG | + | chr1_4:15040645-15040664 | Msa0152430:five_prime_UTR | 30.0% | |
| TGACATTGACGCAATATTTA+GGG | + | chr1_4:15040646-15040665 | Msa0152430:five_prime_UTR | 30.0% | |
| ! | AAATGGTGTTGAGAAAGAAA+GGG | - | chr1_4:15040741-15040760 | None:intergenic | 30.0% |
| ! | TAAATGGTGTTGAGAAAGAA+AGG | - | chr1_4:15040742-15040761 | None:intergenic | 30.0% |
| !!! | CTTTTTTGACTTTCCTGAAT+AGG | - | chr1_4:15041224-15041243 | None:intergenic | 30.0% |
| ! | AAAAAAGTTAGCACTGAAGA+TGG | + | chr1_4:15041237-15041256 | Msa0152430:exon | 30.0% |
| ! | AAAAAGTTAGCACTGAAGAT+GGG | + | chr1_4:15041238-15041257 | Msa0152430:exon | 30.0% |
| TGAATAATTGCAAATGCTCT+TGG | - | chr1_4:15041397-15041416 | None:intergenic | 30.0% | |
| AAAACATGCTACATTCATGA+TGG | + | chr1_4:15041429-15041448 | Msa0152430:CDS | 30.0% | |
| !! | CAATTTATTTCTGCTAGGTA+AGG | - | chr1_4:15041455-15041474 | None:intergenic | 30.0% |
| TACCTAGCAGAAATAAATTG+CGG | + | chr1_4:15041455-15041474 | Msa0152430:CDS | 30.0% | |
| GGAACTCCTATTTAAAAGTT+AGG | + | chr1_4:15041482-15041501 | Msa0152430:CDS | 30.0% | |
| ! | GACGATGTTAAACTGTATTT+TGG | + | chr1_4:15041556-15041575 | Msa0152430:CDS | 30.0% |
| ATTCTCTATATTATGGAAGG+TGG | + | chr1_4:15041600-15041619 | Msa0152430:CDS | 30.0% | |
| !! | TGCAAAGTATCTATTGATTC+AGG | + | chr1_4:15041756-15041775 | Msa0152430:CDS | 30.0% |
| TTGACATTGACGCAATATTT+AGG | + | chr1_4:15040645-15040664 | Msa0152430:five_prime_UTR | 30.0% | |
| TGACATTGACGCAATATTTA+GGG | + | chr1_4:15040646-15040665 | Msa0152430:five_prime_UTR | 30.0% | |
| ! | AAATGGTGTTGAGAAAGAAA+GGG | - | chr1_4:15040741-15040760 | None:intergenic | 30.0% |
| ! | TAAATGGTGTTGAGAAAGAA+AGG | - | chr1_4:15040742-15040761 | None:intergenic | 30.0% |
| !!! | CTTTTTTGACTTTCCTGAAT+AGG | - | chr1_4:15041224-15041243 | None:intergenic | 30.0% |
| ! | AAAAAAGTTAGCACTGAAGA+TGG | + | chr1_4:15041237-15041256 | Msa0152430:exon | 30.0% |
| ! | AAAAAGTTAGCACTGAAGAT+GGG | + | chr1_4:15041238-15041257 | Msa0152430:exon | 30.0% |
| TGAATAATTGCAAATGCTCT+TGG | - | chr1_4:15041397-15041416 | None:intergenic | 30.0% | |
| AAAACATGCTACATTCATGA+TGG | + | chr1_4:15041429-15041448 | Msa0152430:CDS | 30.0% | |
| !! | CAATTTATTTCTGCTAGGTA+AGG | - | chr1_4:15041455-15041474 | None:intergenic | 30.0% |
| TACCTAGCAGAAATAAATTG+CGG | + | chr1_4:15041455-15041474 | Msa0152430:CDS | 30.0% | |
| GGAACTCCTATTTAAAAGTT+AGG | + | chr1_4:15041482-15041501 | Msa0152430:CDS | 30.0% | |
| ! | GACGATGTTAAACTGTATTT+TGG | + | chr1_4:15041556-15041575 | Msa0152430:CDS | 30.0% |
| ATTCTCTATATTATGGAAGG+TGG | + | chr1_4:15041600-15041619 | Msa0152430:CDS | 30.0% | |
| !! | TGCAAAGTATCTATTGATTC+AGG | + | chr1_4:15041756-15041775 | Msa0152430:CDS | 30.0% |
| TCTTCTTCCTCAAAATCTCT+CGG | + | chr1_4:15040692-15040711 | Msa0152430:five_prime_UTR | 35.0% | |
| GAAGCATAGCATACATGAAA+AGG | - | chr1_4:15040775-15040794 | None:intergenic | 35.0% | |
| !!! | AAGGGTCACTTTTAGAATGA+CGG | + | chr1_4:15040981-15041000 | Msa0152430:intron | 35.0% |
| GAATGACGGTAGAAAATTCT+TGG | + | chr1_4:15040995-15041014 | Msa0152430:intron | 35.0% | |
| TTTCTTCTGCTATCCTATTC+AGG | + | chr1_4:15041208-15041227 | Msa0152430:intron | 35.0% | |
| GTTGCTATGAAGATTAGAGT+AGG | + | chr1_4:15041358-15041377 | Msa0152430:CDS | 35.0% | |
| ATGAAGATTAGAGTAGGCAA+AGG | + | chr1_4:15041364-15041383 | Msa0152430:CDS | 35.0% | |
| !! | AACCGCAATTTATTTCTGCT+AGG | - | chr1_4:15041460-15041479 | None:intergenic | 35.0% |
| AGCAGAAATAAATTGCGGTT+CGG | + | chr1_4:15041460-15041479 | Msa0152430:CDS | 35.0% | |
| AGATATTGATCCAAAGCCAA+GGG | + | chr1_4:15041516-15041535 | Msa0152430:CDS | 35.0% | |
| ! | TGGATGCTAGTGTAGATTTT+GGG | + | chr1_4:15041620-15041639 | Msa0152430:CDS | 35.0% |
| GGAAAGATTCATGAATGACA+TGG | + | chr1_4:15041994-15042013 | Msa0152430:three_prime_UTR | 35.0% | |
| TCTTCTTCCTCAAAATCTCT+CGG | + | chr1_4:15040692-15040711 | Msa0152430:five_prime_UTR | 35.0% | |
| GAAGCATAGCATACATGAAA+AGG | - | chr1_4:15040775-15040794 | None:intergenic | 35.0% | |
| !!! | AAGGGTCACTTTTAGAATGA+CGG | + | chr1_4:15040981-15041000 | Msa0152430:intron | 35.0% |
| GAATGACGGTAGAAAATTCT+TGG | + | chr1_4:15040995-15041014 | Msa0152430:intron | 35.0% | |
| TTTCTTCTGCTATCCTATTC+AGG | + | chr1_4:15041208-15041227 | Msa0152430:intron | 35.0% | |
| GTTGCTATGAAGATTAGAGT+AGG | + | chr1_4:15041358-15041377 | Msa0152430:CDS | 35.0% | |
| ATGAAGATTAGAGTAGGCAA+AGG | + | chr1_4:15041364-15041383 | Msa0152430:CDS | 35.0% | |
| !! | AACCGCAATTTATTTCTGCT+AGG | - | chr1_4:15041460-15041479 | None:intergenic | 35.0% |
| AGCAGAAATAAATTGCGGTT+CGG | + | chr1_4:15041460-15041479 | Msa0152430:CDS | 35.0% | |
| AGATATTGATCCAAAGCCAA+GGG | + | chr1_4:15041516-15041535 | Msa0152430:CDS | 35.0% | |
| ! | TGGATGCTAGTGTAGATTTT+GGG | + | chr1_4:15041620-15041639 | Msa0152430:CDS | 35.0% |
| GGAAAGATTCATGAATGACA+TGG | + | chr1_4:15041994-15042013 | Msa0152430:three_prime_UTR | 35.0% | |
| CTTGAAATAGTTTGGGGAAG+TGG | + | chr1_4:15040605-15040624 | Msa0152430:five_prime_UTR | 40.0% | |
| GGAAGAAGAAAGTGAAAGAG+AGG | - | chr1_4:15040681-15040700 | None:intergenic | 40.0% | |
| GAGACACGTTCACAAAAGAA+GGG | - | chr1_4:15041294-15041313 | None:intergenic | 40.0% | |
| TGAGACACGTTCACAAAAGA+AGG | - | chr1_4:15041295-15041314 | None:intergenic | 40.0% | |
| ! | GTAGAGCATTATACTGGTGA+AGG | + | chr1_4:15041328-15041347 | Msa0152430:CDS | 40.0% |
| TTATACTGGTGAAGGAAGTG+TGG | + | chr1_4:15041336-15041355 | Msa0152430:CDS | 40.0% | |
| GCAGAAATAAATTGCGGTTC+GGG | + | chr1_4:15041461-15041480 | Msa0152430:CDS | 40.0% | |
| GAGATATTGATCCAAAGCCA+AGG | + | chr1_4:15041515-15041534 | Msa0152430:CDS | 40.0% | |
| !! | TTTTGGCTGTCAGATCTCAA+AGG | + | chr1_4:15041573-15041592 | Msa0152430:CDS | 40.0% |
| ! | GTGGATGCTAGTGTAGATTT+TGG | + | chr1_4:15041619-15041638 | Msa0152430:CDS | 40.0% |
| !!! | GCTAGTGTAGATTTTGGGAT+TGG | + | chr1_4:15041625-15041644 | Msa0152430:CDS | 40.0% |
| ! | TTGGGATTGGTATGAGAAAG+TGG | + | chr1_4:15041638-15041657 | Msa0152430:CDS | 40.0% |
| ! | TACTTTGCAGTTTTACCCTG+TGG | - | chr1_4:15041745-15041764 | None:intergenic | 40.0% |
| CTTGAAATAGTTTGGGGAAG+TGG | + | chr1_4:15040605-15040624 | Msa0152430:five_prime_UTR | 40.0% | |
| GGAAGAAGAAAGTGAAAGAG+AGG | - | chr1_4:15040681-15040700 | None:intergenic | 40.0% | |
| GAGACACGTTCACAAAAGAA+GGG | - | chr1_4:15041294-15041313 | None:intergenic | 40.0% | |
| TGAGACACGTTCACAAAAGA+AGG | - | chr1_4:15041295-15041314 | None:intergenic | 40.0% | |
| ! | GTAGAGCATTATACTGGTGA+AGG | + | chr1_4:15041328-15041347 | Msa0152430:CDS | 40.0% |
| TTATACTGGTGAAGGAAGTG+TGG | + | chr1_4:15041336-15041355 | Msa0152430:CDS | 40.0% | |
| GCAGAAATAAATTGCGGTTC+GGG | + | chr1_4:15041461-15041480 | Msa0152430:CDS | 40.0% | |
| GAGATATTGATCCAAAGCCA+AGG | + | chr1_4:15041515-15041534 | Msa0152430:CDS | 40.0% | |
| !! | TTTTGGCTGTCAGATCTCAA+AGG | + | chr1_4:15041573-15041592 | Msa0152430:CDS | 40.0% |
| ! | GTGGATGCTAGTGTAGATTT+TGG | + | chr1_4:15041619-15041638 | Msa0152430:CDS | 40.0% |
| !!! | GCTAGTGTAGATTTTGGGAT+TGG | + | chr1_4:15041625-15041644 | Msa0152430:CDS | 40.0% |
| ! | TTGGGATTGGTATGAGAAAG+TGG | + | chr1_4:15041638-15041657 | Msa0152430:CDS | 40.0% |
| ! | TACTTTGCAGTTTTACCCTG+TGG | - | chr1_4:15041745-15041764 | None:intergenic | 40.0% |
| ! | ACGATGACCGAGAGATTTTG+AGG | - | chr1_4:15040702-15040721 | None:intergenic | 45.0% |
| TCGGTCATCGTCATCATCAT+CGG | + | chr1_4:15040711-15040730 | Msa0152430:five_prime_UTR | 45.0% | |
| AAACTGTCCAAGAATGCCCT+TGG | - | chr1_4:15041535-15041554 | None:intergenic | 45.0% | |
| ATTGAGCTGCATCAACCACA+GGG | + | chr1_4:15041727-15041746 | Msa0152430:CDS | 45.0% | |
| ! | ACGATGACCGAGAGATTTTG+AGG | - | chr1_4:15040702-15040721 | None:intergenic | 45.0% |
| TCGGTCATCGTCATCATCAT+CGG | + | chr1_4:15040711-15040730 | Msa0152430:five_prime_UTR | 45.0% | |
| AAACTGTCCAAGAATGCCCT+TGG | - | chr1_4:15041535-15041554 | None:intergenic | 45.0% | |
| ATTGAGCTGCATCAACCACA+GGG | + | chr1_4:15041727-15041746 | Msa0152430:CDS | 45.0% | |
| !!! | AACAAAATTTAAAATAAAAA+AGG | - | chr1_4:15041832-15041851 | None:intergenic | 5.0% |
| !!! | TAATAGATATATATATTTTT+AGG | + | chr1_4:15041940-15041959 | Msa0152430:three_prime_UTR | 5.0% |
| !!! | AACAAAATTTAAAATAAAAA+AGG | - | chr1_4:15041832-15041851 | None:intergenic | 5.0% |
| !!! | TAATAGATATATATATTTTT+AGG | + | chr1_4:15041940-15041959 | Msa0152430:three_prime_UTR | 5.0% |
| !! | TCCAAAGCCAAGGGCATTCT+TGG | + | chr1_4:15041525-15041544 | Msa0152430:CDS | 50.0% |
| TCCAAGAATGCCCTTGGCTT+TGG | - | chr1_4:15041529-15041548 | None:intergenic | 50.0% | |
| GATTGAGCTGCATCAACCAC+AGG | + | chr1_4:15041726-15041745 | Msa0152430:CDS | 50.0% | |
| !! | TCCAAAGCCAAGGGCATTCT+TGG | + | chr1_4:15041525-15041544 | Msa0152430:CDS | 50.0% |
| TCCAAGAATGCCCTTGGCTT+TGG | - | chr1_4:15041529-15041548 | None:intergenic | 50.0% | |
| GATTGAGCTGCATCAACCAC+AGG | + | chr1_4:15041726-15041745 | Msa0152430:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 15040557 | 15042020 | 15040557 | ID=Msa0152430;Name=Msa0152430 |
| chr1_4 | mRNA | 15040557 | 15042020 | 15040557 | ID=Msa0152430-mRNA-1;Parent=Msa0152430;Name=Msa0152430-mRNA-1;_AED=0.00;_eAED=0.00;_QI=202|1|1|1|0|0.5|2|177|195 |
| chr1_4 | exon | 15040557 | 15040732 | 15040557 | ID=Msa0152430-mRNA-1:exon:5912;Parent=Msa0152430-mRNA-1 |
| chr1_4 | exon | 15041230 | 15042020 | 15041230 | ID=Msa0152430-mRNA-1:exon:5913;Parent=Msa0152430-mRNA-1 |
| chr1_4 | five_prime_UTR | 15040557 | 15040732 | 15040557 | ID=Msa0152430-mRNA-1:five_prime_utr;Parent=Msa0152430-mRNA-1 |
| chr1_4 | five_prime_UTR | 15041230 | 15041255 | 15041230 | ID=Msa0152430-mRNA-1:five_prime_utr;Parent=Msa0152430-mRNA-1 |
| chr1_4 | CDS | 15041256 | 15041843 | 15041256 | ID=Msa0152430-mRNA-1:cds;Parent=Msa0152430-mRNA-1 |
| chr1_4 | three_prime_UTR | 15041844 | 15042020 | 15041844 | ID=Msa0152430-mRNA-1:three_prime_utr;Parent=Msa0152430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
