Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0993750 | XP_013452347.2 | 60.326 | 184 | 23 | 3 | 1 | 135 | 1 | 183 | 1.66e-56 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0993750 | sp|Q9FLX7|NDUA5_ARATH | 73.077 | 104 | 27 | 1 | 1 | 104 | 1 | 103 | 1.22e-43 | 144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0993750 | I3SP15 | 60.326 | 184 | 23 | 3 | 1 | 135 | 1 | 183 | 7.91e-57 | 184 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011660 | Msa0993750 | -0.801760 | 7.735670e-49 | -8.615850e-47 |
| Msa0044000 | Msa0993750 | 0.802342 | 5.871824e-49 | -8.615850e-47 |
| Msa0602870 | Msa0993750 | 0.811582 | 6.514993e-51 | -8.615850e-47 |
| Msa0607050 | Msa0993750 | 0.803600 | 3.226490e-49 | -8.615850e-47 |
| Msa0610430 | Msa0993750 | 0.814624 | 1.401147e-51 | -8.615850e-47 |
| Msa0610840 | Msa0993750 | -0.804944 | 1.693904e-49 | -8.615850e-47 |
| Msa0643890 | Msa0993750 | 0.804866 | 1.758346e-49 | -8.615850e-47 |
| Msa0683730 | Msa0993750 | 0.807502 | 4.899959e-50 | -8.615850e-47 |
| Msa0729720 | Msa0993750 | 0.808861 | 2.515265e-50 | -8.615850e-47 |
| Msa0743720 | Msa0993750 | 0.820597 | 6.304553e-53 | -8.615850e-47 |
| Msa0749290 | Msa0993750 | 0.801571 | 8.456748e-49 | -8.615850e-47 |
| Msa0808080 | Msa0993750 | 0.824257 | 8.900263e-54 | -8.615850e-47 |
| Msa0820850 | Msa0993750 | 0.818820 | 1.605572e-52 | -8.615850e-47 |
| Msa0127800 | Msa0993750 | 0.806391 | 8.416179e-50 | -8.615850e-47 |
| Msa0211150 | Msa0993750 | 0.803006 | 4.283950e-49 | -8.615850e-47 |
| Msa0218780 | Msa0993750 | 0.805213 | 1.488003e-49 | -8.615850e-47 |
| Msa0440750 | Msa0993750 | 0.807479 | 4.955079e-50 | -8.615850e-47 |
| Msa0453350 | Msa0993750 | 0.812311 | 4.520107e-51 | -8.615850e-47 |
| Msa0992020 | Msa0993750 | 0.987826 | 1.110285e-171 | -8.615850e-47 |
| Msa0993730 | Msa0993750 | 0.987866 | 7.886087e-172 | -8.615850e-47 |
| Msa0993750 | Msa1005990 | 0.815830 | 7.561425e-52 | -8.615850e-47 |
| Msa0993750 | Msa1014540 | 0.808764 | 2.638925e-50 | -8.615850e-47 |
| Msa0993750 | Msa1048160 | 0.814613 | 1.409455e-51 | -8.615850e-47 |
| Msa0993750 | Msa1075540 | 0.806915 | 6.522263e-50 | -8.615850e-47 |
| Msa0993750 | Msa1100050 | 0.831633 | 1.494593e-55 | -8.615850e-47 |
| Msa0993750 | Msa1124960 | 0.803387 | 3.571685e-49 | -8.615850e-47 |
| Msa0993750 | Msa1135470 | 0.840419 | 8.795310e-58 | -8.615850e-47 |
| Msa0993750 | Msa1137570 | 0.806892 | 6.595269e-50 | -8.615850e-47 |
| Msa0993750 | Msa1174040 | 0.817195 | 3.740944e-52 | -8.615850e-47 |
| Msa0993750 | Msa1253020 | 0.800561 | 1.360496e-48 | -8.615850e-47 |
| Msa0993750 | Msa1275360 | 0.803224 | 3.861186e-49 | -8.615850e-47 |
| Msa0993750 | Msa1284550 | 0.800364 | 1.491877e-48 | -8.615850e-47 |
| Msa0993750 | Msa1284680 | 0.804419 | 2.180241e-49 | -8.615850e-47 |
| Msa0993750 | Msa1319800 | 0.807187 | 5.712889e-50 | -8.615850e-47 |
| Msa0993750 | Msa1342900 | 0.807968 | 3.899514e-50 | -8.615850e-47 |
| Msa0993750 | Msa1353470 | 0.819811 | 9.547539e-53 | -8.615850e-47 |
| Msa0993750 | Msa1370070 | -0.819715 | 1.003858e-52 | -8.615850e-47 |
| Msa0993750 | Msa1375560 | 0.800079 | 1.705075e-48 | -8.615850e-47 |
| Msa0326480 | Msa0993750 | 0.805699 | 1.176537e-49 | -8.615850e-47 |
| Msa0547890 | Msa0993750 | 0.801775 | 7.680745e-49 | -8.615850e-47 |
| Msa0849030 | Msa0993750 | 0.825247 | 5.200548e-54 | -8.615850e-47 |
| Msa0861130 | Msa0993750 | 0.820998 | 5.100507e-53 | -8.615850e-47 |
| Msa0876190 | Msa0993750 | 0.814982 | 1.167478e-51 | -8.615850e-47 |
| Msa0958360 | Msa0993750 | 0.988777 | 2.285328e-175 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0993750 | MtrunA17_Chr6g0470231 | 60.326 | 184 | 23 | 3 | 1 | 135 | 87 | 269 | 3.51e-60 | 186 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0993750 | AT5G52840.2 | 72.642 | 106 | 28 | 1 | 1 | 106 | 1 | 105 | 6.80e-46 | 145 |
| Msa0993750 | AT5G52840.1 | 73.077 | 104 | 27 | 1 | 1 | 104 | 1 | 103 | 1.24e-44 | 144 |
Find 30 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGATTCAACAGTCTTTC+AGG | 0.170090 | 6_4:+66868410 | Msa0993750:three_prime_UTR |
| ATTTAGTTTGATGAAATAAA+AGG | 0.246089 | 6_4:-66868370 | None:intergenic |
| TTACGATACCCTTTGTCTTC+TGG | 0.257585 | 6_4:-66866429 | None:intergenic |
| TCAACCAGTTCAAGTTGTTT+TGG | 0.282704 | 6_4:-66868448 | None:intergenic |
| CTTTACGCGTCTTGGACTTA+AGG | 0.317074 | 6_4:+66866467 | Msa0993750:CDS |
| TGCTCCAAAACAACTTGAAC+TGG | 0.351627 | 6_4:+66868444 | Msa0993750:three_prime_UTR |
| ATTAACACTTCTCTTGCGTT+TGG | 0.354432 | 6_4:-66866366 | None:intergenic |
| TTAACACTTCTCTTGCGTTT+GGG | 0.383857 | 6_4:-66866365 | None:intergenic |
| TTTGTCAAGAAGAAGAATAT+TGG | 0.391623 | 6_4:+66866490 | Msa0993750:CDS |
| TCTAATATAGCTGACGTTCA+TGG | 0.401029 | 6_4:-66868317 | None:intergenic |
| TATTGAGAATCGTCTTGGTT+GGG | 0.401668 | 6_4:+66866518 | Msa0993750:CDS |
| GTTGAAAGCTTTACGCGTCT+TGG | 0.426516 | 6_4:+66866459 | Msa0993750:CDS |
| GACACTAGACGAGATCAAAA+AGG | 0.435244 | 6_4:+66866404 | Msa0993750:CDS |
| AAACTTATTTGCCTTATGAA+TGG | 0.436503 | 6_4:+66866582 | Msa0993750:CDS |
| GAATCGTCTTGGTTGGGGTC+AGG | 0.444696 | 6_4:+66866524 | Msa0993750:CDS |
| CGTCTAGTGTCTTACTATAG+AGG | 0.468796 | 6_4:-66866392 | None:intergenic |
| TCAATGGCCGCGCCGTCGCT+CGG | 0.471122 | 6_4:-66866296 | None:intergenic |
| TCAGATTCAACAGTCTTTCA+GGG | 0.476603 | 6_4:+66868411 | Msa0993750:three_prime_UTR |
| ACAAGAAAAGATGGTGCTGC+TGG | 0.493227 | 6_4:+66868269 | Msa0993750:CDS |
| AAAGGAAAACCACATTCAAA+AGG | 0.501827 | 6_4:-66868352 | None:intergenic |
| ATTGAGAATCGTCTTGGTTG+GGG | 0.506457 | 6_4:+66866519 | Msa0993750:CDS |
| ATGAATATTGAGAATCGTCT+TGG | 0.525507 | 6_4:+66866513 | Msa0993750:CDS |
| ATATTGAGAATCGTCTTGGT+TGG | 0.528056 | 6_4:+66866517 | Msa0993750:CDS |
| AAAAGGTTCCAGAAGACAAA+GGG | 0.534276 | 6_4:+66866421 | Msa0993750:CDS |
| GTAAAATACAGGTTTGTCGA+TGG | 0.573538 | 6_4:+66868220 | Msa0993750:intron |
| AAAACAACAACAGGAATCGT+AGG | 0.600187 | 6_4:+66866330 | Msa0993750:CDS |
| GTGGCTGAAACAAGAAAAGA+TGG | 0.607028 | 6_4:+66868260 | Msa0993750:CDS |
| GGCAAAGATAGAAGAACTTG+TGG | 0.623499 | 6_4:+66868241 | Msa0993750:CDS |
| GAAGATGTTTCTCCGAGCGA+CGG | 0.629217 | 6_4:+66866284 | Msa0993750:exon |
| TGTTTCTCCGAGCGACGGCG+CGG | 0.688196 | 6_4:+66866289 | Msa0993750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTTATTTAATCATATGAT+AGG | - | chr6_4:66866793-66866812 | None:intergenic | 15.0% |
| !!! | ATTTAGTTTGATGAAATAAA+AGG | - | chr6_4:66868373-66868392 | None:intergenic | 15.0% |
| !!! | TTGTTATTTAATCATATGAT+AGG | - | chr6_4:66866793-66866812 | None:intergenic | 15.0% |
| !!! | ATTTAGTTTGATGAAATAAA+AGG | - | chr6_4:66868373-66868392 | None:intergenic | 15.0% |
| !! | CAAAAAAAATACCATTCATA+AGG | - | chr6_4:66866596-66866615 | None:intergenic | 20.0% |
| !! | TTAAGTAGATTATTAGTAAG+TGG | + | chr6_4:66866767-66866786 | Msa0993750:intron | 20.0% |
| !! | TCATATGATTAAATAACAAG+AGG | + | chr6_4:66866794-66866813 | Msa0993750:intron | 20.0% |
| !! | TTCTAGTATTTAACTCTAAT+GGG | - | chr6_4:66866821-66866840 | None:intergenic | 20.0% |
| !! | ATTCTAGTATTTAACTCTAA+TGG | - | chr6_4:66866822-66866841 | None:intergenic | 20.0% |
| !! | GATGGTAATTAAATAAAACA+TGG | - | chr6_4:66867015-66867034 | None:intergenic | 20.0% |
| !! | CAAACAAAAAAATAAACAGA+TGG | - | chr6_4:66867033-66867052 | None:intergenic | 20.0% |
| !!! | CATCTGTTTATTTTTTTGTT+TGG | + | chr6_4:66867031-66867050 | Msa0993750:intron | 20.0% |
| !!! | TTGTTTTTCTTTTGTATCAT+CGG | + | chr6_4:66867160-66867179 | Msa0993750:intron | 20.0% |
| !!! | TTTGTTTTCTCATTGAAAAA+AGG | - | chr6_4:66867778-66867797 | None:intergenic | 20.0% |
| !!! | TTCTATGTTGATTAATATGT+GGG | - | chr6_4:66867820-66867839 | None:intergenic | 20.0% |
| !!! | TTTCTATGTTGATTAATATG+TGG | - | chr6_4:66867821-66867840 | None:intergenic | 20.0% |
| !! | CAAAAAAAATACCATTCATA+AGG | - | chr6_4:66866596-66866615 | None:intergenic | 20.0% |
| !! | TTAAGTAGATTATTAGTAAG+TGG | + | chr6_4:66866767-66866786 | Msa0993750:intron | 20.0% |
| !! | TCATATGATTAAATAACAAG+AGG | + | chr6_4:66866794-66866813 | Msa0993750:intron | 20.0% |
| !! | TTCTAGTATTTAACTCTAAT+GGG | - | chr6_4:66866821-66866840 | None:intergenic | 20.0% |
| !! | ATTCTAGTATTTAACTCTAA+TGG | - | chr6_4:66866822-66866841 | None:intergenic | 20.0% |
| !! | GATGGTAATTAAATAAAACA+TGG | - | chr6_4:66867015-66867034 | None:intergenic | 20.0% |
| !! | CAAACAAAAAAATAAACAGA+TGG | - | chr6_4:66867033-66867052 | None:intergenic | 20.0% |
| !!! | CATCTGTTTATTTTTTTGTT+TGG | + | chr6_4:66867031-66867050 | Msa0993750:intron | 20.0% |
| !!! | TTGTTTTTCTTTTGTATCAT+CGG | + | chr6_4:66867160-66867179 | Msa0993750:intron | 20.0% |
| !!! | TTTGTTTTCTCATTGAAAAA+AGG | - | chr6_4:66867778-66867797 | None:intergenic | 20.0% |
| !!! | TTCTATGTTGATTAATATGT+GGG | - | chr6_4:66867820-66867839 | None:intergenic | 20.0% |
| !!! | TTTCTATGTTGATTAATATG+TGG | - | chr6_4:66867821-66867840 | None:intergenic | 20.0% |
| !! | GTTTTTATTCTTGTCATCAA+TGG | - | chr6_4:66866315-66866334 | None:intergenic | 25.0% |
| ! | ACAAGAATAAAAACAACAAC+AGG | + | chr6_4:66866321-66866340 | Msa0993750:CDS | 25.0% |
| ! | TTTGTCAAGAAGAAGAATAT+TGG | + | chr6_4:66866490-66866509 | Msa0993750:CDS | 25.0% |
| ! | AAACTTATTTGCCTTATGAA+TGG | + | chr6_4:66866582-66866601 | Msa0993750:CDS | 25.0% |
| !!! | ATGGTATTTTTTTTGTGATC+TGG | + | chr6_4:66866601-66866620 | Msa0993750:intron | 25.0% |
| !! | TTCTACTATTTGTTGCAAAT+TGG | + | chr6_4:66866689-66866708 | Msa0993750:intron | 25.0% |
| ! | TAATTAGTAGGTCGTTAATT+AGG | + | chr6_4:66866743-66866762 | Msa0993750:intron | 25.0% |
| ! | TCTAGTATTTAACTCTAATG+GGG | - | chr6_4:66866820-66866839 | None:intergenic | 25.0% |
| ! | AGAATGTTCTCTATATAAAG+CGG | + | chr6_4:66866837-66866856 | Msa0993750:intron | 25.0% |
| ! | ATTTCCATTCGTATGAATAA+AGG | + | chr6_4:66866987-66867006 | Msa0993750:intron | 25.0% |
| !! | TGTTTTTCTTTTGTATCATC+GGG | + | chr6_4:66867161-66867180 | Msa0993750:intron | 25.0% |
| !! | GTAACTTATCATATTTTACC+TGG | + | chr6_4:66867237-66867256 | Msa0993750:intron | 25.0% |
| ! | ATGTGGTTACATTCAATTAT+TGG | + | chr6_4:66867618-66867637 | Msa0993750:intron | 25.0% |
| !!! | TAAGAAAATAGGTTTTTCGA+AGG | - | chr6_4:66867887-66867906 | None:intergenic | 25.0% |
| !!! | TTAAGAGACTGTATTTTAGA+AGG | - | chr6_4:66868102-66868121 | None:intergenic | 25.0% |
| !!! | TCATTTGTTGTGTAAAATAC+AGG | + | chr6_4:66868209-66868228 | Msa0993750:intron | 25.0% |
| ! | AAATAACATTGAACTTTGCA+TGG | + | chr6_4:66868480-66868499 | Msa0993750:three_prime_UTR | 25.0% |
| !! | GTTTTTATTCTTGTCATCAA+TGG | - | chr6_4:66866315-66866334 | None:intergenic | 25.0% |
| ! | ACAAGAATAAAAACAACAAC+AGG | + | chr6_4:66866321-66866340 | Msa0993750:CDS | 25.0% |
| ! | TTTGTCAAGAAGAAGAATAT+TGG | + | chr6_4:66866490-66866509 | Msa0993750:CDS | 25.0% |
| ! | AAACTTATTTGCCTTATGAA+TGG | + | chr6_4:66866582-66866601 | Msa0993750:CDS | 25.0% |
| !!! | ATGGTATTTTTTTTGTGATC+TGG | + | chr6_4:66866601-66866620 | Msa0993750:intron | 25.0% |
| !! | TTCTACTATTTGTTGCAAAT+TGG | + | chr6_4:66866689-66866708 | Msa0993750:intron | 25.0% |
| ! | TAATTAGTAGGTCGTTAATT+AGG | + | chr6_4:66866743-66866762 | Msa0993750:intron | 25.0% |
| ! | TCTAGTATTTAACTCTAATG+GGG | - | chr6_4:66866820-66866839 | None:intergenic | 25.0% |
| ! | AGAATGTTCTCTATATAAAG+CGG | + | chr6_4:66866837-66866856 | Msa0993750:intron | 25.0% |
| ! | ATTTCCATTCGTATGAATAA+AGG | + | chr6_4:66866987-66867006 | Msa0993750:intron | 25.0% |
| !! | TGTTTTTCTTTTGTATCATC+GGG | + | chr6_4:66867161-66867180 | Msa0993750:intron | 25.0% |
| !! | GTAACTTATCATATTTTACC+TGG | + | chr6_4:66867237-66867256 | Msa0993750:intron | 25.0% |
| ! | ATGTGGTTACATTCAATTAT+TGG | + | chr6_4:66867618-66867637 | Msa0993750:intron | 25.0% |
| !!! | TAAGAAAATAGGTTTTTCGA+AGG | - | chr6_4:66867887-66867906 | None:intergenic | 25.0% |
| !!! | TTAAGAGACTGTATTTTAGA+AGG | - | chr6_4:66868102-66868121 | None:intergenic | 25.0% |
| !!! | TCATTTGTTGTGTAAAATAC+AGG | + | chr6_4:66868209-66868228 | Msa0993750:intron | 25.0% |
| ATGAATATTGAGAATCGTCT+TGG | + | chr6_4:66866513-66866532 | Msa0993750:CDS | 30.0% | |
| !! | TTGTGTTTTTGTGAGCTTAT+TGG | + | chr6_4:66866625-66866644 | Msa0993750:intron | 30.0% |
| TGAGCTTATTGGCAATTATT+TGG | + | chr6_4:66866636-66866655 | Msa0993750:intron | 30.0% | |
| ! | TTTGTTGCAAATTGGTAGTT+AGG | + | chr6_4:66866697-66866716 | Msa0993750:intron | 30.0% |
| TAGTTAGGATCTAATATGAG+AGG | + | chr6_4:66866712-66866731 | Msa0993750:intron | 30.0% | |
| AGTTAGGATCTAATATGAGA+GGG | + | chr6_4:66866713-66866732 | Msa0993750:intron | 30.0% | |
| CTATATAAAGCGGAATTCTT+AGG | + | chr6_4:66866847-66866866 | Msa0993750:intron | 30.0% | |
| !!! | ATTCTTAGGTGTTTTAGAGT+AGG | + | chr6_4:66866861-66866880 | Msa0993750:intron | 30.0% |
| ! | ACGGAATAACTTTTCTGTTT+AGG | + | chr6_4:66866884-66866903 | Msa0993750:intron | 30.0% |
| ! | CGGAATAACTTTTCTGTTTA+GGG | + | chr6_4:66866885-66866904 | Msa0993750:intron | 30.0% |
| GTTACTGTTAATTCGATTCT+AGG | + | chr6_4:66867063-66867082 | Msa0993750:intron | 30.0% | |
| ! | TCATTCACACAATTCTAGAA+AGG | - | chr6_4:66867340-66867359 | None:intergenic | 30.0% |
| AATTGTGTGAATGAATACTG+AGG | + | chr6_4:66867346-66867365 | Msa0993750:intron | 30.0% | |
| ATTGTGTGAATGAATACTGA+GGG | + | chr6_4:66867347-66867366 | Msa0993750:intron | 30.0% | |
| ACAATAGATACGGTATAACA+AGG | - | chr6_4:66867400-66867419 | None:intergenic | 30.0% | |
| !!! | CCATTTTTTGTTACACAGAA+TGG | - | chr6_4:66867425-66867444 | None:intergenic | 30.0% |
| CCATTCTGTGTAACAAAAAA+TGG | + | chr6_4:66867422-66867441 | Msa0993750:intron | 30.0% | |
| ATTTGTCACACCAAATTACA+GGG | + | chr6_4:66867466-66867485 | Msa0993750:intron | 30.0% | |
| GTCGAAATTACATCAAAAGT+GGG | - | chr6_4:66867735-66867754 | None:intergenic | 30.0% | |
| TGTCGAAATTACATCAAAAG+TGG | - | chr6_4:66867736-66867755 | None:intergenic | 30.0% | |
| AAAAAGGTAGTGACTTATGA+AGG | - | chr6_4:66867762-66867781 | None:intergenic | 30.0% | |
| AGGAAAAATGAAGTTGAACT+TGG | - | chr6_4:66867867-66867886 | None:intergenic | 30.0% | |
| ! | AAACAGATTGGTGTTCTATT+TGG | - | chr6_4:66867932-66867951 | None:intergenic | 30.0% |
| GTTACTAGAGAAAAACAGAT+TGG | - | chr6_4:66867944-66867963 | None:intergenic | 30.0% | |
| ! | AGTCTCTTAATTTTGTTCAG+TGG | + | chr6_4:66868112-66868131 | Msa0993750:intron | 30.0% |
| !!! | TTCAGTGGTTCTTATTTTTC+TGG | + | chr6_4:66868127-66868146 | Msa0993750:intron | 30.0% |
| ! | TTGAATTCTCCTTTTGAATG+TGG | + | chr6_4:66868343-66868362 | Msa0993750:three_prime_UTR | 30.0% |
| AAAGGAAAACCACATTCAAA+AGG | - | chr6_4:66868355-66868374 | None:intergenic | 30.0% | |
| ATGAATATTGAGAATCGTCT+TGG | + | chr6_4:66866513-66866532 | Msa0993750:CDS | 30.0% | |
| !! | TTGTGTTTTTGTGAGCTTAT+TGG | + | chr6_4:66866625-66866644 | Msa0993750:intron | 30.0% |
| TGAGCTTATTGGCAATTATT+TGG | + | chr6_4:66866636-66866655 | Msa0993750:intron | 30.0% | |
| ! | TTTGTTGCAAATTGGTAGTT+AGG | + | chr6_4:66866697-66866716 | Msa0993750:intron | 30.0% |
| TAGTTAGGATCTAATATGAG+AGG | + | chr6_4:66866712-66866731 | Msa0993750:intron | 30.0% | |
| AGTTAGGATCTAATATGAGA+GGG | + | chr6_4:66866713-66866732 | Msa0993750:intron | 30.0% | |
| CTATATAAAGCGGAATTCTT+AGG | + | chr6_4:66866847-66866866 | Msa0993750:intron | 30.0% | |
| !!! | ATTCTTAGGTGTTTTAGAGT+AGG | + | chr6_4:66866861-66866880 | Msa0993750:intron | 30.0% |
| ! | ACGGAATAACTTTTCTGTTT+AGG | + | chr6_4:66866884-66866903 | Msa0993750:intron | 30.0% |
| ! | CGGAATAACTTTTCTGTTTA+GGG | + | chr6_4:66866885-66866904 | Msa0993750:intron | 30.0% |
| GTTACTGTTAATTCGATTCT+AGG | + | chr6_4:66867063-66867082 | Msa0993750:intron | 30.0% | |
| ! | TCATTCACACAATTCTAGAA+AGG | - | chr6_4:66867340-66867359 | None:intergenic | 30.0% |
| AATTGTGTGAATGAATACTG+AGG | + | chr6_4:66867346-66867365 | Msa0993750:intron | 30.0% | |
| ATTGTGTGAATGAATACTGA+GGG | + | chr6_4:66867347-66867366 | Msa0993750:intron | 30.0% | |
| ACAATAGATACGGTATAACA+AGG | - | chr6_4:66867400-66867419 | None:intergenic | 30.0% | |
| !!! | CCATTTTTTGTTACACAGAA+TGG | - | chr6_4:66867425-66867444 | None:intergenic | 30.0% |
| CCATTCTGTGTAACAAAAAA+TGG | + | chr6_4:66867422-66867441 | Msa0993750:intron | 30.0% | |
| ATTTGTCACACCAAATTACA+GGG | + | chr6_4:66867466-66867485 | Msa0993750:intron | 30.0% | |
| GTCGAAATTACATCAAAAGT+GGG | - | chr6_4:66867735-66867754 | None:intergenic | 30.0% | |
| TGTCGAAATTACATCAAAAG+TGG | - | chr6_4:66867736-66867755 | None:intergenic | 30.0% | |
| AAAAAGGTAGTGACTTATGA+AGG | - | chr6_4:66867762-66867781 | None:intergenic | 30.0% | |
| AGGAAAAATGAAGTTGAACT+TGG | - | chr6_4:66867867-66867886 | None:intergenic | 30.0% | |
| ! | AAACAGATTGGTGTTCTATT+TGG | - | chr6_4:66867932-66867951 | None:intergenic | 30.0% |
| GTTACTAGAGAAAAACAGAT+TGG | - | chr6_4:66867944-66867963 | None:intergenic | 30.0% | |
| ! | AGTCTCTTAATTTTGTTCAG+TGG | + | chr6_4:66868112-66868131 | Msa0993750:intron | 30.0% |
| !!! | TTCAGTGGTTCTTATTTTTC+TGG | + | chr6_4:66868127-66868146 | Msa0993750:intron | 30.0% |
| ! | TTGAATTCTCCTTTTGAATG+TGG | + | chr6_4:66868343-66868362 | Msa0993750:three_prime_UTR | 30.0% |
| AAAGGAAAACCACATTCAAA+AGG | - | chr6_4:66868355-66868374 | None:intergenic | 30.0% | |
| AAAACAACAACAGGAATCGT+AGG | + | chr6_4:66866330-66866349 | Msa0993750:CDS | 35.0% | |
| TTAACACTTCTCTTGCGTTT+GGG | - | chr6_4:66866368-66866387 | None:intergenic | 35.0% | |
| ATTAACACTTCTCTTGCGTT+TGG | - | chr6_4:66866369-66866388 | None:intergenic | 35.0% | |
| AAAAAGGTTCCAGAAGACAA+AGG | + | chr6_4:66866420-66866439 | Msa0993750:CDS | 35.0% | |
| AAAAGGTTCCAGAAGACAAA+GGG | + | chr6_4:66866421-66866440 | Msa0993750:CDS | 35.0% | |
| ATATTGAGAATCGTCTTGGT+TGG | + | chr6_4:66866517-66866536 | Msa0993750:CDS | 35.0% | |
| TATTGAGAATCGTCTTGGTT+GGG | + | chr6_4:66866518-66866537 | Msa0993750:CDS | 35.0% | |
| GCTTATTGGCAATTATTTGG+AGG | + | chr6_4:66866639-66866658 | Msa0993750:intron | 35.0% | |
| !! | GAGGGTGTTAAGTAATTAGT+AGG | + | chr6_4:66866731-66866750 | Msa0993750:intron | 35.0% |
| !!! | TTAGGTGTTTTAGAGTAGGA+CGG | + | chr6_4:66866865-66866884 | Msa0993750:intron | 35.0% |
| !! | TAATTCGATTCTAGGATCCA+TGG | + | chr6_4:66867071-66867090 | Msa0993750:intron | 35.0% |
| !! | AATTCGATTCTAGGATCCAT+GGG | + | chr6_4:66867072-66867091 | Msa0993750:intron | 35.0% |
| ! | TTTTCAGCATCCCAAATGAT+AGG | - | chr6_4:66867100-66867119 | None:intergenic | 35.0% |
| ! | ATTTGGGATGCTGAAAAACT+GGG | + | chr6_4:66867103-66867122 | Msa0993750:intron | 35.0% |
| ! | TTTCTTTTGTATCATCGGGT+TGG | + | chr6_4:66867165-66867184 | Msa0993750:intron | 35.0% |
| ! | AACATAGAGCATTATGTACC+AGG | - | chr6_4:66867258-66867277 | None:intergenic | 35.0% |
| CTCTATGTTGTTCATTCATG+TGG | + | chr6_4:66867269-66867288 | Msa0993750:intron | 35.0% | |
| TTCATGTGGTGTGATGAATT+TGG | + | chr6_4:66867283-66867302 | Msa0993750:intron | 35.0% | |
| TCATGTGGTGTGATGAATTT+GGG | + | chr6_4:66867284-66867303 | Msa0993750:intron | 35.0% | |
| CAGAATGGACACAATAGATA+CGG | - | chr6_4:66867410-66867429 | None:intergenic | 35.0% | |
| GATTTGTCACACCAAATTAC+AGG | + | chr6_4:66867465-66867484 | Msa0993750:intron | 35.0% | |
| CTGTAATCTTCCCTGTAATT+TGG | - | chr6_4:66867479-66867498 | None:intergenic | 35.0% | |
| !! | TGTGGGTTTTATAGTCTTGA+TGG | - | chr6_4:66867803-66867822 | None:intergenic | 35.0% |
| AGTTGAACTTGGCGATTAAT+TGG | - | chr6_4:66867856-66867875 | None:intergenic | 35.0% | |
| ! | GTTCTAGGCTGTAAGAAAAT+AGG | - | chr6_4:66867898-66867917 | None:intergenic | 35.0% |
| GTTCTATTTGGATACAGTTG+TGG | - | chr6_4:66867920-66867939 | None:intergenic | 35.0% | |
| GAACAGAAATGTTGACAAAG+AGG | - | chr6_4:66868017-66868036 | None:intergenic | 35.0% | |
| CAGATAACGACAGACAAATA+GGG | - | chr6_4:66868066-66868085 | None:intergenic | 35.0% | |
| TCAGATAACGACAGACAAAT+AGG | - | chr6_4:66868067-66868086 | None:intergenic | 35.0% | |
| GTCGTTATCTGATATTATCG+AGG | + | chr6_4:66868075-66868094 | Msa0993750:intron | 35.0% | |
| !!! | GTGGTTCTTATTTTTCTGGT+TGG | + | chr6_4:66868131-66868150 | Msa0993750:intron | 35.0% |
| GTAAAATACAGGTTTGTCGA+TGG | + | chr6_4:66868220-66868239 | Msa0993750:intron | 35.0% | |
| !!! | GCTTTTTGGGTTCTTCATTA+GGG | - | chr6_4:66868298-66868317 | None:intergenic | 35.0% |
| TCTAATATAGCTGACGTTCA+TGG | - | chr6_4:66868320-66868339 | None:intergenic | 35.0% | |
| TTCAGATTCAACAGTCTTTC+AGG | + | chr6_4:66868410-66868429 | Msa0993750:three_prime_UTR | 35.0% | |
| TCAGATTCAACAGTCTTTCA+GGG | + | chr6_4:66868411-66868430 | Msa0993750:three_prime_UTR | 35.0% | |
| !!! | TTCAAGTTGTTTTGGAGCAA+AGG | - | chr6_4:66868443-66868462 | None:intergenic | 35.0% |
| !!! | TCAACCAGTTCAAGTTGTTT+TGG | - | chr6_4:66868451-66868470 | None:intergenic | 35.0% |
| AAAACAACAACAGGAATCGT+AGG | + | chr6_4:66866330-66866349 | Msa0993750:CDS | 35.0% | |
| TTAACACTTCTCTTGCGTTT+GGG | - | chr6_4:66866368-66866387 | None:intergenic | 35.0% | |
| ATTAACACTTCTCTTGCGTT+TGG | - | chr6_4:66866369-66866388 | None:intergenic | 35.0% | |
| AAAAAGGTTCCAGAAGACAA+AGG | + | chr6_4:66866420-66866439 | Msa0993750:CDS | 35.0% | |
| AAAAGGTTCCAGAAGACAAA+GGG | + | chr6_4:66866421-66866440 | Msa0993750:CDS | 35.0% | |
| ATATTGAGAATCGTCTTGGT+TGG | + | chr6_4:66866517-66866536 | Msa0993750:CDS | 35.0% | |
| TATTGAGAATCGTCTTGGTT+GGG | + | chr6_4:66866518-66866537 | Msa0993750:CDS | 35.0% | |
| GCTTATTGGCAATTATTTGG+AGG | + | chr6_4:66866639-66866658 | Msa0993750:intron | 35.0% | |
| !! | GAGGGTGTTAAGTAATTAGT+AGG | + | chr6_4:66866731-66866750 | Msa0993750:intron | 35.0% |
| !!! | TTAGGTGTTTTAGAGTAGGA+CGG | + | chr6_4:66866865-66866884 | Msa0993750:intron | 35.0% |
| !! | TAATTCGATTCTAGGATCCA+TGG | + | chr6_4:66867071-66867090 | Msa0993750:intron | 35.0% |
| !! | AATTCGATTCTAGGATCCAT+GGG | + | chr6_4:66867072-66867091 | Msa0993750:intron | 35.0% |
| ! | TTTTCAGCATCCCAAATGAT+AGG | - | chr6_4:66867100-66867119 | None:intergenic | 35.0% |
| ! | ATTTGGGATGCTGAAAAACT+GGG | + | chr6_4:66867103-66867122 | Msa0993750:intron | 35.0% |
| ! | TTTCTTTTGTATCATCGGGT+TGG | + | chr6_4:66867165-66867184 | Msa0993750:intron | 35.0% |
| ! | AACATAGAGCATTATGTACC+AGG | - | chr6_4:66867258-66867277 | None:intergenic | 35.0% |
| CTCTATGTTGTTCATTCATG+TGG | + | chr6_4:66867269-66867288 | Msa0993750:intron | 35.0% | |
| TTCATGTGGTGTGATGAATT+TGG | + | chr6_4:66867283-66867302 | Msa0993750:intron | 35.0% | |
| TCATGTGGTGTGATGAATTT+GGG | + | chr6_4:66867284-66867303 | Msa0993750:intron | 35.0% | |
| CAGAATGGACACAATAGATA+CGG | - | chr6_4:66867410-66867429 | None:intergenic | 35.0% | |
| GATTTGTCACACCAAATTAC+AGG | + | chr6_4:66867465-66867484 | Msa0993750:intron | 35.0% | |
| CTGTAATCTTCCCTGTAATT+TGG | - | chr6_4:66867479-66867498 | None:intergenic | 35.0% | |
| !! | TGTGGGTTTTATAGTCTTGA+TGG | - | chr6_4:66867803-66867822 | None:intergenic | 35.0% |
| AGTTGAACTTGGCGATTAAT+TGG | - | chr6_4:66867856-66867875 | None:intergenic | 35.0% | |
| ! | GTTCTAGGCTGTAAGAAAAT+AGG | - | chr6_4:66867898-66867917 | None:intergenic | 35.0% |
| GTTCTATTTGGATACAGTTG+TGG | - | chr6_4:66867920-66867939 | None:intergenic | 35.0% | |
| GAACAGAAATGTTGACAAAG+AGG | - | chr6_4:66868017-66868036 | None:intergenic | 35.0% | |
| CAGATAACGACAGACAAATA+GGG | - | chr6_4:66868066-66868085 | None:intergenic | 35.0% | |
| TCAGATAACGACAGACAAAT+AGG | - | chr6_4:66868067-66868086 | None:intergenic | 35.0% | |
| GTCGTTATCTGATATTATCG+AGG | + | chr6_4:66868075-66868094 | Msa0993750:intron | 35.0% | |
| !!! | GTGGTTCTTATTTTTCTGGT+TGG | + | chr6_4:66868131-66868150 | Msa0993750:intron | 35.0% |
| GTAAAATACAGGTTTGTCGA+TGG | + | chr6_4:66868220-66868239 | Msa0993750:intron | 35.0% | |
| !!! | GCTTTTTGGGTTCTTCATTA+GGG | - | chr6_4:66868298-66868317 | None:intergenic | 35.0% |
| TCTAATATAGCTGACGTTCA+TGG | - | chr6_4:66868320-66868339 | None:intergenic | 35.0% | |
| TTCAGATTCAACAGTCTTTC+AGG | + | chr6_4:66868410-66868429 | Msa0993750:three_prime_UTR | 35.0% | |
| TCAGATTCAACAGTCTTTCA+GGG | + | chr6_4:66868411-66868430 | Msa0993750:three_prime_UTR | 35.0% | |
| !!! | TTCAAGTTGTTTTGGAGCAA+AGG | - | chr6_4:66868443-66868462 | None:intergenic | 35.0% |
| !!! | TCAACCAGTTCAAGTTGTTT+TGG | - | chr6_4:66868451-66868470 | None:intergenic | 35.0% |
| CGTCTAGTGTCTTACTATAG+AGG | - | chr6_4:66866395-66866414 | None:intergenic | 40.0% | |
| GACACTAGACGAGATCAAAA+AGG | + | chr6_4:66866404-66866423 | Msa0993750:CDS | 40.0% | |
| TTACGATACCCTTTGTCTTC+TGG | - | chr6_4:66866432-66866451 | None:intergenic | 40.0% | |
| ATTGAGAATCGTCTTGGTTG+GGG | + | chr6_4:66866519-66866538 | Msa0993750:CDS | 40.0% | |
| ! | TTTCTGTTTAGGGTCAGAGT+AGG | + | chr6_4:66866895-66866914 | Msa0993750:intron | 40.0% |
| !! | GATTCCTCTTTGAGTTGTGT+CGG | + | chr6_4:66866917-66866936 | Msa0993750:intron | 40.0% |
| GGTGCCTTTATTCATACGAA+TGG | - | chr6_4:66866994-66867013 | None:intergenic | 40.0% | |
| ATCCATGGGTTCCTATCATT+TGG | + | chr6_4:66867086-66867105 | Msa0993750:intron | 40.0% | |
| TCCATGGGTTCCTATCATTT+GGG | + | chr6_4:66867087-66867106 | Msa0993750:intron | 40.0% | |
| ! | CATTTGGGATGCTGAAAAAC+TGG | + | chr6_4:66867102-66867121 | Msa0993750:intron | 40.0% |
| ! | TTTGGGATGCTGAAAAACTG+GGG | + | chr6_4:66867104-66867123 | Msa0993750:intron | 40.0% |
| GAATGAATACTGAGGGAAAC+TGG | + | chr6_4:66867354-66867373 | Msa0993750:intron | 40.0% | |
| TGTCAGATACCAACACATGT+CGG | - | chr6_4:66867593-66867612 | None:intergenic | 40.0% | |
| TGGTATCTGACATCAACATG+TGG | + | chr6_4:66867601-66867620 | Msa0993750:intron | 40.0% | |
| TTGGATACAGTTGTGGTTCT+AGG | - | chr6_4:66867913-66867932 | None:intergenic | 40.0% | |
| TCACTAGTCGTCATAACACA+AGG | - | chr6_4:66868168-66868187 | None:intergenic | 40.0% | |
| GGCAAAGATAGAAGAACTTG+TGG | + | chr6_4:66868241-66868260 | Msa0993750:CDS | 40.0% | |
| GTGGCTGAAACAAGAAAAGA+TGG | + | chr6_4:66868260-66868279 | Msa0993750:CDS | 40.0% | |
| !!! | GGCTTTTTGGGTTCTTCATT+AGG | - | chr6_4:66868299-66868318 | None:intergenic | 40.0% |
| !!! | GTTGTTTTGGAGCAAAGGAT+TGG | - | chr6_4:66868438-66868457 | None:intergenic | 40.0% |
| TGCTCCAAAACAACTTGAAC+TGG | + | chr6_4:66868444-66868463 | Msa0993750:three_prime_UTR | 40.0% | |
| CGTCTAGTGTCTTACTATAG+AGG | - | chr6_4:66866395-66866414 | None:intergenic | 40.0% | |
| GACACTAGACGAGATCAAAA+AGG | + | chr6_4:66866404-66866423 | Msa0993750:CDS | 40.0% | |
| TTACGATACCCTTTGTCTTC+TGG | - | chr6_4:66866432-66866451 | None:intergenic | 40.0% | |
| ATTGAGAATCGTCTTGGTTG+GGG | + | chr6_4:66866519-66866538 | Msa0993750:CDS | 40.0% | |
| ! | TTTCTGTTTAGGGTCAGAGT+AGG | + | chr6_4:66866895-66866914 | Msa0993750:intron | 40.0% |
| !! | GATTCCTCTTTGAGTTGTGT+CGG | + | chr6_4:66866917-66866936 | Msa0993750:intron | 40.0% |
| GGTGCCTTTATTCATACGAA+TGG | - | chr6_4:66866994-66867013 | None:intergenic | 40.0% | |
| ATCCATGGGTTCCTATCATT+TGG | + | chr6_4:66867086-66867105 | Msa0993750:intron | 40.0% | |
| TCCATGGGTTCCTATCATTT+GGG | + | chr6_4:66867087-66867106 | Msa0993750:intron | 40.0% | |
| ! | CATTTGGGATGCTGAAAAAC+TGG | + | chr6_4:66867102-66867121 | Msa0993750:intron | 40.0% |
| ! | TTTGGGATGCTGAAAAACTG+GGG | + | chr6_4:66867104-66867123 | Msa0993750:intron | 40.0% |
| GAATGAATACTGAGGGAAAC+TGG | + | chr6_4:66867354-66867373 | Msa0993750:intron | 40.0% | |
| TGTCAGATACCAACACATGT+CGG | - | chr6_4:66867593-66867612 | None:intergenic | 40.0% | |
| TGGTATCTGACATCAACATG+TGG | + | chr6_4:66867601-66867620 | Msa0993750:intron | 40.0% | |
| TTGGATACAGTTGTGGTTCT+AGG | - | chr6_4:66867913-66867932 | None:intergenic | 40.0% | |
| TCACTAGTCGTCATAACACA+AGG | - | chr6_4:66868168-66868187 | None:intergenic | 40.0% | |
| GGCAAAGATAGAAGAACTTG+TGG | + | chr6_4:66868241-66868260 | Msa0993750:CDS | 40.0% | |
| GTGGCTGAAACAAGAAAAGA+TGG | + | chr6_4:66868260-66868279 | Msa0993750:CDS | 40.0% | |
| !!! | GGCTTTTTGGGTTCTTCATT+AGG | - | chr6_4:66868299-66868318 | None:intergenic | 40.0% |
| !!! | GTTGTTTTGGAGCAAAGGAT+TGG | - | chr6_4:66868438-66868457 | None:intergenic | 40.0% |
| TGCTCCAAAACAACTTGAAC+TGG | + | chr6_4:66868444-66868463 | Msa0993750:three_prime_UTR | 40.0% | |
| GTTGAAAGCTTTACGCGTCT+TGG | + | chr6_4:66866459-66866478 | Msa0993750:CDS | 45.0% | |
| CTTTACGCGTCTTGGACTTA+AGG | + | chr6_4:66866467-66866486 | Msa0993750:CDS | 45.0% | |
| TCCCAAATGATAGGAACCCA+TGG | - | chr6_4:66867091-66867110 | None:intergenic | 45.0% | |
| TCTAAGTGTCCGACATGTGT+TGG | + | chr6_4:66867581-66867600 | Msa0993750:intron | 45.0% | |
| AAAGTGGGCACAACTTGTGT+CGG | - | chr6_4:66867720-66867739 | None:intergenic | 45.0% | |
| TAGGGAGACTTGGAACAAAG+AGG | - | chr6_4:66868048-66868067 | None:intergenic | 45.0% | |
| GACAGACAAATAGGGAGACT+TGG | - | chr6_4:66868058-66868077 | None:intergenic | 45.0% | |
| !! | ACAAGAAAAGATGGTGCTGC+TGG | + | chr6_4:66868269-66868288 | Msa0993750:CDS | 45.0% |
| ! | GCTGACGTTCATGGCTTTTT+GGG | - | chr6_4:66868311-66868330 | None:intergenic | 45.0% |
| ! | AGCTGACGTTCATGGCTTTT+TGG | - | chr6_4:66868312-66868331 | None:intergenic | 45.0% |
| GTTGAAAGCTTTACGCGTCT+TGG | + | chr6_4:66866459-66866478 | Msa0993750:CDS | 45.0% | |
| CTTTACGCGTCTTGGACTTA+AGG | + | chr6_4:66866467-66866486 | Msa0993750:CDS | 45.0% | |
| TCCCAAATGATAGGAACCCA+TGG | - | chr6_4:66867091-66867110 | None:intergenic | 45.0% | |
| TCTAAGTGTCCGACATGTGT+TGG | + | chr6_4:66867581-66867600 | Msa0993750:intron | 45.0% | |
| AAAGTGGGCACAACTTGTGT+CGG | - | chr6_4:66867720-66867739 | None:intergenic | 45.0% | |
| TAGGGAGACTTGGAACAAAG+AGG | - | chr6_4:66868048-66868067 | None:intergenic | 45.0% | |
| GACAGACAAATAGGGAGACT+TGG | - | chr6_4:66868058-66868077 | None:intergenic | 45.0% | |
| !! | ACAAGAAAAGATGGTGCTGC+TGG | + | chr6_4:66868269-66868288 | Msa0993750:CDS | 45.0% |
| ! | GCTGACGTTCATGGCTTTTT+GGG | - | chr6_4:66868311-66868330 | None:intergenic | 45.0% |
| ! | AGCTGACGTTCATGGCTTTT+TGG | - | chr6_4:66868312-66868331 | None:intergenic | 45.0% |
| GAAGATGTTTCTCCGAGCGA+CGG | + | chr6_4:66866284-66866303 | Msa0993750:exon | 50.0% | |
| AGCTCCGACACAACTCAAAG+AGG | - | chr6_4:66866924-66866943 | None:intergenic | 50.0% | |
| TTGTGTCGGAGCTTTGCTCT+GGG | + | chr6_4:66866931-66866950 | Msa0993750:intron | 50.0% | |
| AAGTGGGCACAACTTGTGTC+GGG | - | chr6_4:66867719-66867738 | None:intergenic | 50.0% | |
| GAAGATGTTTCTCCGAGCGA+CGG | + | chr6_4:66866284-66866303 | Msa0993750:exon | 50.0% | |
| AGCTCCGACACAACTCAAAG+AGG | - | chr6_4:66866924-66866943 | None:intergenic | 50.0% | |
| TTGTGTCGGAGCTTTGCTCT+GGG | + | chr6_4:66866931-66866950 | Msa0993750:intron | 50.0% | |
| AAGTGGGCACAACTTGTGTC+GGG | - | chr6_4:66867719-66867738 | None:intergenic | 50.0% | |
| GAATCGTCTTGGTTGGGGTC+AGG | + | chr6_4:66866524-66866543 | Msa0993750:CDS | 55.0% | |
| GTTGTGTCGGAGCTTTGCTC+TGG | + | chr6_4:66866930-66866949 | Msa0993750:intron | 55.0% | |
| AACTTGTGTCGGGGACTCGA+GGG | - | chr6_4:66867709-66867728 | None:intergenic | 55.0% | |
| AGTGGGCACAACTTGTGTCG+GGG | - | chr6_4:66867718-66867737 | None:intergenic | 55.0% | |
| GAATCGTCTTGGTTGGGGTC+AGG | + | chr6_4:66866524-66866543 | Msa0993750:CDS | 55.0% | |
| GTTGTGTCGGAGCTTTGCTC+TGG | + | chr6_4:66866930-66866949 | Msa0993750:intron | 55.0% | |
| AACTTGTGTCGGGGACTCGA+GGG | - | chr6_4:66867709-66867728 | None:intergenic | 55.0% | |
| AGTGGGCACAACTTGTGTCG+GGG | - | chr6_4:66867718-66867737 | None:intergenic | 55.0% | |
| !! | GGGGACTCGAGGGTATCTAG+GGG | - | chr6_4:66867699-66867718 | None:intergenic | 60.0% |
| !! | CGGGGACTCGAGGGTATCTA+GGG | - | chr6_4:66867700-66867719 | None:intergenic | 60.0% |
| !! | TCGGGGACTCGAGGGTATCT+AGG | - | chr6_4:66867701-66867720 | None:intergenic | 60.0% |
| CAACTTGTGTCGGGGACTCG+AGG | - | chr6_4:66867710-66867729 | None:intergenic | 60.0% | |
| !! | GGGGACTCGAGGGTATCTAG+GGG | - | chr6_4:66867699-66867718 | None:intergenic | 60.0% |
| !! | CGGGGACTCGAGGGTATCTA+GGG | - | chr6_4:66867700-66867719 | None:intergenic | 60.0% |
| !! | TCGGGGACTCGAGGGTATCT+AGG | - | chr6_4:66867701-66867720 | None:intergenic | 60.0% |
| CAACTTGTGTCGGGGACTCG+AGG | - | chr6_4:66867710-66867729 | None:intergenic | 60.0% | |
| TGTTTCTCCGAGCGACGGCG+CGG | + | chr6_4:66866289-66866308 | Msa0993750:CDS | 65.0% | |
| TGTTTCTCCGAGCGACGGCG+CGG | + | chr6_4:66866289-66866308 | Msa0993750:CDS | 65.0% | |
| TCAATGGCCGCGCCGTCGCT+CGG | - | chr6_4:66866299-66866318 | None:intergenic | 70.0% | |
| TCAATGGCCGCGCCGTCGCT+CGG | - | chr6_4:66866299-66866318 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 66866266 | 66868501 | 66866266 | ID=Msa0993750;Name=Msa0993750 |
| chr6_4 | mRNA | 66866266 | 66868501 | 66866266 | ID=Msa0993750-mRNA-1;Parent=Msa0993750;Name=Msa0993750-mRNA-1;_AED=0.00;_eAED=0.00;_QI=22|1|1|1|1|1|2|179|135 |
| chr6_4 | exon | 66866266 | 66866603 | 66866266 | ID=Msa0993750-mRNA-1:exon:12457;Parent=Msa0993750-mRNA-1 |
| chr6_4 | exon | 66868231 | 66868501 | 66868231 | ID=Msa0993750-mRNA-1:exon:12458;Parent=Msa0993750-mRNA-1 |
| chr6_4 | five_prime_UTR | 66866266 | 66866287 | 66866266 | ID=Msa0993750-mRNA-1:five_prime_utr;Parent=Msa0993750-mRNA-1 |
| chr6_4 | CDS | 66866288 | 66866603 | 66866288 | ID=Msa0993750-mRNA-1:cds;Parent=Msa0993750-mRNA-1 |
| chr6_4 | CDS | 66868231 | 66868322 | 66868231 | ID=Msa0993750-mRNA-1:cds;Parent=Msa0993750-mRNA-1 |
| chr6_4 | three_prime_UTR | 66868323 | 66868501 | 66868323 | ID=Msa0993750-mRNA-1:three_prime_utr;Parent=Msa0993750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
