Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547890 | XP_003607149.1 | 98.034 | 356 | 7 | 0 | 1 | 356 | 1 | 356 | 0.0 | 709 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547890 | sp|Q6K508|GLUD1_ORYSJ | 26.064 | 376 | 202 | 9 | 48 | 350 | 85 | 457 | 1.76e-36 | 140 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547890 | G7JMA3 | 98.034 | 356 | 7 | 0 | 1 | 356 | 1 | 356 | 0.0 | 709 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0547890 | 0.800788 | 1.222705e-48 | -8.615850e-47 |
| Msa0003700 | Msa0547890 | 0.825229 | 5.252240e-54 | -8.615850e-47 |
| Msa0014710 | Msa0547890 | 0.809251 | 2.075032e-50 | -8.615850e-47 |
| Msa0015390 | Msa0547890 | 0.876945 | 9.322899e-69 | -8.615850e-47 |
| Msa0017510 | Msa0547890 | 0.843050 | 1.778009e-58 | -8.615850e-47 |
| Msa0028640 | Msa0547890 | 0.807797 | 4.240115e-50 | -8.615850e-47 |
| Msa0029310 | Msa0547890 | 0.805807 | 1.116648e-49 | -8.615850e-47 |
| Msa0031340 | Msa0547890 | 0.800706 | 1.271031e-48 | -8.615850e-47 |
| Msa0048000 | Msa0547890 | 0.806996 | 6.270645e-50 | -8.615850e-47 |
| Msa0053780 | Msa0547890 | 0.817644 | 2.962998e-52 | -8.615850e-47 |
| Msa0069330 | Msa0547890 | 0.834702 | 2.572848e-56 | -8.615850e-47 |
| Msa0078650 | Msa0547890 | 0.805371 | 1.378948e-49 | -8.615850e-47 |
| Msa0089360 | Msa0547890 | 0.818295 | 2.111636e-52 | -8.615850e-47 |
| Msa0090360 | Msa0547890 | 0.807212 | 5.643989e-50 | -8.615850e-47 |
| Msa0091600 | Msa0547890 | 0.809776 | 1.600470e-50 | -8.615850e-47 |
| Msa0095560 | Msa0547890 | 0.819230 | 1.295471e-52 | -8.615850e-47 |
| Msa0096450 | Msa0547890 | 0.820264 | 7.520694e-53 | -8.615850e-47 |
| Msa0104550 | Msa0547890 | 0.835660 | 1.474442e-56 | -8.615850e-47 |
| Msa0110970 | Msa0547890 | 0.817128 | 3.871371e-52 | -8.615850e-47 |
| Msa0115270 | Msa0547890 | 0.803299 | 3.724678e-49 | -8.615850e-47 |
| Msa0126370 | Msa0547890 | 0.814909 | 1.211561e-51 | -8.615850e-47 |
| Msa0127800 | Msa0547890 | 0.807321 | 5.351152e-50 | -8.615850e-47 |
| Msa0131770 | Msa0547890 | 0.812050 | 5.153217e-51 | -8.615850e-47 |
| Msa0137840 | Msa0547890 | 0.801008 | 1.102639e-48 | -8.615850e-47 |
| Msa0140780 | Msa0547890 | 0.801103 | 1.054192e-48 | -8.615850e-47 |
| Msa0141620 | Msa0547890 | 0.802839 | 4.637615e-49 | -8.615850e-47 |
| Msa0143560 | Msa0547890 | 0.801315 | 9.543363e-49 | -8.615850e-47 |
| Msa0146260 | Msa0547890 | 0.800789 | 1.221981e-48 | -8.615850e-47 |
| Msa0148100 | Msa0547890 | 0.810991 | 8.751129e-51 | -8.615850e-47 |
| Msa0150570 | Msa0547890 | 0.818037 | 2.415617e-52 | -8.615850e-47 |
| Msa0152400 | Msa0547890 | 0.800257 | 1.568616e-48 | -8.615850e-47 |
| Msa0157290 | Msa0547890 | 0.842776 | 2.102615e-58 | -8.615850e-47 |
| Msa0159930 | Msa0547890 | 0.802516 | 5.405209e-49 | -8.615850e-47 |
| Msa0168500 | Msa0547890 | 0.813892 | 2.033007e-51 | -8.615850e-47 |
| Msa0169860 | Msa0547890 | 0.813489 | 2.493956e-51 | -8.615850e-47 |
| Msa0184040 | Msa0547890 | 0.806823 | 6.822309e-50 | -8.615850e-47 |
| Msa0195630 | Msa0547890 | 0.816815 | 4.552330e-52 | -8.615850e-47 |
| Msa0195980 | Msa0547890 | 0.815695 | 8.102256e-52 | -8.615850e-47 |
| Msa0200260 | Msa0547890 | 0.802030 | 6.808292e-49 | -8.615850e-47 |
| Msa0202950 | Msa0547890 | 0.805734 | 1.157237e-49 | -8.615850e-47 |
| Msa0205510 | Msa0547890 | 0.840056 | 1.094173e-57 | -8.615850e-47 |
| Msa0206010 | Msa0547890 | 0.809284 | 2.041249e-50 | -8.615850e-47 |
| Msa0210450 | Msa0547890 | 0.809776 | 1.600804e-50 | -8.615850e-47 |
| Msa0211150 | Msa0547890 | 0.836087 | 1.149451e-56 | -8.615850e-47 |
| Msa0212990 | Msa0547890 | 0.807039 | 6.141177e-50 | -8.615850e-47 |
| Msa0220740 | Msa0547890 | 0.805795 | 1.123151e-49 | -8.615850e-47 |
| Msa0237310 | Msa0547890 | 0.811122 | 8.198201e-51 | -8.615850e-47 |
| Msa0237410 | Msa0547890 | 0.819305 | 1.245545e-52 | -8.615850e-47 |
| Msa0376350 | Msa0547890 | 0.831140 | 1.975554e-55 | -8.615850e-47 |
| Msa0379640 | Msa0547890 | 0.832889 | 7.307271e-56 | -8.615850e-47 |
| Msa0388950 | Msa0547890 | 0.802790 | 4.746281e-49 | -8.615850e-47 |
| Msa0388960 | Msa0547890 | 0.837619 | 4.670826e-57 | -8.615850e-47 |
| Msa0389340 | Msa0547890 | 0.831863 | 1.311344e-55 | -8.615850e-47 |
| Msa0394490 | Msa0547890 | 0.804299 | 2.309440e-49 | -8.615850e-47 |
| Msa0406770 | Msa0547890 | 0.809591 | 1.754732e-50 | -8.615850e-47 |
| Msa0410650 | Msa0547890 | 0.840841 | 6.820124e-58 | -8.615850e-47 |
| Msa0417270 | Msa0547890 | 0.813961 | 1.963019e-51 | -8.615850e-47 |
| Msa0420960 | Msa0547890 | 0.804024 | 2.634616e-49 | -8.615850e-47 |
| Msa0422850 | Msa0547890 | 0.816591 | 5.111571e-52 | -8.615850e-47 |
| Msa0422930 | Msa0547890 | 0.818929 | 1.516232e-52 | -8.615850e-47 |
| Msa0423520 | Msa0547890 | 0.806832 | 6.792332e-50 | -8.615850e-47 |
| Msa0424790 | Msa0547890 | 0.814168 | 1.767466e-51 | -8.615850e-47 |
| Msa0426640 | Msa0547890 | 0.820079 | 8.291186e-53 | -8.615850e-47 |
| Msa0428590 | Msa0547890 | 0.804117 | 2.519408e-49 | -8.615850e-47 |
| Msa0428930 | Msa0547890 | 0.824563 | 7.540966e-54 | -8.615850e-47 |
| Msa0433360 | Msa0547890 | 0.824952 | 6.106658e-54 | -8.615850e-47 |
| Msa0435390 | Msa0547890 | 0.806915 | 6.521844e-50 | -8.615850e-47 |
| Msa0435400 | Msa0547890 | 0.802798 | 4.727504e-49 | -8.615850e-47 |
| Msa0439970 | Msa0547890 | 0.813302 | 2.742567e-51 | -8.615850e-47 |
| Msa0440750 | Msa0547890 | 0.821170 | 4.654941e-53 | -8.615850e-47 |
| Msa0453000 | Msa0547890 | 0.816633 | 5.000465e-52 | -8.615850e-47 |
| Msa0453350 | Msa0547890 | 0.802951 | 4.397242e-49 | -8.615850e-47 |
| Msa0455040 | Msa0547890 | 0.803142 | 4.015064e-49 | -8.615850e-47 |
| Msa0461720 | Msa0547890 | 0.804242 | 2.373162e-49 | -8.615850e-47 |
| Msa0464680 | Msa0547890 | 0.809917 | 1.493034e-50 | -8.615850e-47 |
| Msa0467060 | Msa0547890 | 0.830341 | 3.102205e-55 | -8.615850e-47 |
| Msa0469990 | Msa0547890 | 0.802437 | 5.611614e-49 | -8.615850e-47 |
| Msa0471670 | Msa0547890 | 0.804943 | 1.694825e-49 | -8.615850e-47 |
| Msa0479170 | Msa0547890 | 0.831409 | 1.696574e-55 | -8.615850e-47 |
| Msa0479970 | Msa0547890 | 0.805159 | 1.527085e-49 | -8.615850e-47 |
| Msa0481530 | Msa0547890 | 0.813734 | 2.203718e-51 | -8.615850e-47 |
| Msa0243100 | Msa0547890 | 0.812085 | 5.061849e-51 | -8.615850e-47 |
| Msa0244860 | Msa0547890 | 0.802097 | 6.594582e-49 | -8.615850e-47 |
| Msa0244960 | Msa0547890 | 0.802093 | 6.607212e-49 | -8.615850e-47 |
| Msa0250880 | Msa0547890 | 0.803232 | 3.845441e-49 | -8.615850e-47 |
| Msa0253200 | Msa0547890 | 0.813567 | 2.397428e-51 | -8.615850e-47 |
| Msa0257460 | Msa0547890 | 0.806195 | 9.253865e-50 | -8.615850e-47 |
| Msa0258310 | Msa0547890 | 0.807619 | 4.626372e-50 | -8.615850e-47 |
| Msa0259500 | Msa0547890 | 0.836613 | 8.443118e-57 | -8.615850e-47 |
| Msa0260810 | Msa0547890 | 0.811034 | 8.566932e-51 | -8.615850e-47 |
| Msa0264150 | Msa0547890 | 0.800749 | 1.245630e-48 | -8.615850e-47 |
| Msa0272690 | Msa0547890 | 0.803231 | 3.848154e-49 | -8.615850e-47 |
| Msa0273900 | Msa0547890 | 0.811977 | 5.343929e-51 | -8.615850e-47 |
| Msa0274730 | Msa0547890 | 0.809473 | 1.859939e-50 | -8.615850e-47 |
| Msa0282250 | Msa0547890 | 0.825550 | 4.410381e-54 | -8.615850e-47 |
| Msa0283450 | Msa0547890 | 0.805925 | 1.055038e-49 | -8.615850e-47 |
| Msa0284410 | Msa0547890 | 0.811833 | 5.745771e-51 | -8.615850e-47 |
| Msa0284420 | Msa0547890 | 0.811110 | 8.246066e-51 | -8.615850e-47 |
| Msa0287410 | Msa0547890 | 0.831066 | 2.060037e-55 | -8.615850e-47 |
| Msa0287650 | Msa0547890 | 0.823977 | 1.035982e-53 | -8.615850e-47 |
| Msa0288100 | Msa0547890 | 0.810359 | 1.198932e-50 | -8.615850e-47 |
| Msa0292030 | Msa0547890 | 0.816153 | 6.404453e-52 | -8.615850e-47 |
| Msa0304510 | Msa0547890 | 0.812325 | 4.487792e-51 | -8.615850e-47 |
| Msa0305700 | Msa0547890 | 0.825954 | 3.535819e-54 | -8.615850e-47 |
| Msa0306210 | Msa0547890 | -0.806718 | 7.180440e-50 | -8.615850e-47 |
| Msa0311700 | Msa0547890 | 0.824098 | 9.700922e-54 | -8.615850e-47 |
| Msa0315290 | Msa0547890 | 0.801679 | 8.037204e-49 | -8.615850e-47 |
| Msa0315530 | Msa0547890 | 0.821693 | 3.524822e-53 | -8.615850e-47 |
| Msa0326110 | Msa0547890 | 0.816344 | 5.805245e-52 | -8.615850e-47 |
| Msa0326520 | Msa0547890 | 0.809275 | 2.051187e-50 | -8.615850e-47 |
| Msa0330340 | Msa0547890 | 0.801507 | 8.716810e-49 | -8.615850e-47 |
| Msa0332000 | Msa0547890 | 0.804791 | 1.823383e-49 | -8.615850e-47 |
| Msa0333920 | Msa0547890 | 0.803837 | 2.881485e-49 | -8.615850e-47 |
| Msa0334040 | Msa0547890 | 0.816098 | 6.588520e-52 | -8.615850e-47 |
| Msa0334360 | Msa0547890 | 0.802548 | 5.325206e-49 | -8.615850e-47 |
| Msa0340470 | Msa0547890 | 0.802343 | 5.869643e-49 | -8.615850e-47 |
| Msa0341540 | Msa0547890 | 0.842462 | 2.548971e-58 | -8.615850e-47 |
| Msa0343850 | Msa0547890 | 0.809335 | 1.990896e-50 | -8.615850e-47 |
| Msa0345970 | Msa0547890 | 0.809466 | 1.865738e-50 | -8.615850e-47 |
| Msa0347770 | Msa0547890 | 0.816017 | 6.869700e-52 | -8.615850e-47 |
| Msa0357340 | Msa0547890 | 0.812652 | 3.807093e-51 | -8.615850e-47 |
| Msa0360210 | Msa0547890 | 0.809285 | 2.040614e-50 | -8.615850e-47 |
| Msa0363790 | Msa0547890 | 0.815645 | 8.312337e-52 | -8.615850e-47 |
| Msa0484780 | Msa0547890 | 0.831267 | 1.839534e-55 | -8.615850e-47 |
| Msa0488270 | Msa0547890 | 0.800726 | 1.258683e-48 | -8.615850e-47 |
| Msa0488560 | Msa0547890 | 0.807143 | 5.837838e-50 | -8.615850e-47 |
| Msa0493630 | Msa0547890 | 0.800323 | 1.520751e-48 | -8.615850e-47 |
| Msa0495320 | Msa0547890 | 0.818286 | 2.121616e-52 | -8.615850e-47 |
| Msa0498060 | Msa0547890 | 0.807204 | 5.665533e-50 | -8.615850e-47 |
| Msa0502880 | Msa0547890 | 0.805356 | 1.388926e-49 | -8.615850e-47 |
| Msa0507680 | Msa0547890 | 0.838164 | 3.382520e-57 | -8.615850e-47 |
| Msa0516170 | Msa0547890 | 0.828819 | 7.271381e-55 | -8.615850e-47 |
| Msa0516440 | Msa0547890 | 0.817310 | 3.523099e-52 | -8.615850e-47 |
| Msa0523460 | Msa0547890 | 0.849533 | 3.041784e-60 | -8.615850e-47 |
| Msa0524500 | Msa0547890 | 0.801334 | 9.455936e-49 | -8.615850e-47 |
| Msa0529890 | Msa0547890 | 0.806545 | 7.811073e-50 | -8.615850e-47 |
| Msa0542520 | Msa0547890 | 0.820167 | 7.915552e-53 | -8.615850e-47 |
| Msa0545070 | Msa0547890 | 0.803621 | 3.193900e-49 | -8.615850e-47 |
| Msa0547890 | Msa0548170 | 0.805550 | 1.264878e-49 | -8.615850e-47 |
| Msa0547890 | Msa0550430 | 0.800421 | 1.452620e-48 | -8.615850e-47 |
| Msa0547890 | Msa0551890 | 0.832831 | 7.549942e-56 | -8.615850e-47 |
| Msa0547890 | Msa0574890 | 0.832526 | 8.987635e-56 | -8.615850e-47 |
| Msa0547890 | Msa0576880 | 0.809225 | 2.102431e-50 | -8.615850e-47 |
| Msa0547890 | Msa0577500 | 0.804688 | 1.915563e-49 | -8.615850e-47 |
| Msa0547890 | Msa0585300 | 0.815695 | 8.104539e-52 | -8.615850e-47 |
| Msa0547890 | Msa0585560 | 0.809023 | 2.322155e-50 | -8.615850e-47 |
| Msa0547890 | Msa0593650 | 0.811633 | 6.350386e-51 | -8.615850e-47 |
| Msa0547890 | Msa0599890 | 0.813804 | 2.126613e-51 | -8.615850e-47 |
| Msa0547890 | Msa0601750 | 0.815422 | 9.320822e-52 | -8.615850e-47 |
| Msa0547890 | Msa0602240 | 0.812523 | 4.061057e-51 | -8.615850e-47 |
| Msa0547890 | Msa0602250 | 0.819310 | 1.242061e-52 | -8.615850e-47 |
| Msa0547890 | Msa0602310 | 0.806418 | 8.306328e-50 | -8.615850e-47 |
| Msa0547890 | Msa0602870 | 0.917052 | 8.481528e-86 | -8.615850e-47 |
| Msa0547890 | Msa0607910 | 0.801956 | 7.048313e-49 | -8.615850e-47 |
| Msa0547890 | Msa0610430 | 0.832117 | 1.135116e-55 | -8.615850e-47 |
| Msa0547890 | Msa0615710 | 0.805537 | 1.272596e-49 | -8.615850e-47 |
| Msa0547890 | Msa0616160 | 0.809171 | 2.158707e-50 | -8.615850e-47 |
| Msa0547890 | Msa0622650 | 0.806160 | 9.414720e-50 | -8.615850e-47 |
| Msa0547890 | Msa0625720 | 0.804084 | 2.559549e-49 | -8.615850e-47 |
| Msa0547890 | Msa0626090 | 0.819486 | 1.132447e-52 | -8.615850e-47 |
| Msa0547890 | Msa0635380 | 0.806196 | 9.249474e-50 | -8.615850e-47 |
| Msa0547890 | Msa0643890 | 0.919371 | 4.893923e-87 | -8.615850e-47 |
| Msa0547890 | Msa0657970 | 0.836963 | 6.876278e-57 | -8.615850e-47 |
| Msa0547890 | Msa0663380 | 0.809296 | 2.030073e-50 | -8.615850e-47 |
| Msa0547890 | Msa0663390 | 0.819605 | 1.063806e-52 | -8.615850e-47 |
| Msa0547890 | Msa0663810 | 0.819311 | 1.241385e-52 | -8.615850e-47 |
| Msa0547890 | Msa0663920 | 0.812963 | 3.253508e-51 | -8.615850e-47 |
| Msa0547890 | Msa0667050 | 0.803230 | 3.849036e-49 | -8.615850e-47 |
| Msa0547890 | Msa0669320 | 0.804851 | 1.771587e-49 | -8.615850e-47 |
| Msa0547890 | Msa0672570 | 0.801713 | 7.906517e-49 | -8.615850e-47 |
| Msa0547890 | Msa0673460 | 0.816797 | 4.594187e-52 | -8.615850e-47 |
| Msa0547890 | Msa0674580 | 0.817485 | 3.217737e-52 | -8.615850e-47 |
| Msa0547890 | Msa0683730 | 0.943696 | 7.544163e-103 | -8.615850e-47 |
| Msa0547890 | Msa0685920 | 0.807402 | 5.145285e-50 | -8.615850e-47 |
| Msa0547890 | Msa0692950 | 0.802680 | 5.000605e-49 | -8.615850e-47 |
| Msa0547890 | Msa0693380 | 0.826686 | 2.366812e-54 | -8.615850e-47 |
| Msa0547890 | Msa0700650 | 0.800836 | 1.195434e-48 | -8.615850e-47 |
| Msa0547890 | Msa0702470 | 0.800521 | 1.386032e-48 | -8.615850e-47 |
| Msa0547890 | Msa0703050 | 0.822108 | 2.826172e-53 | -8.615850e-47 |
| Msa0547890 | Msa0708520 | 0.814266 | 1.681288e-51 | -8.615850e-47 |
| Msa0547890 | Msa0709400 | 0.804601 | 1.997972e-49 | -8.615850e-47 |
| Msa0547890 | Msa0716690 | 0.802449 | 5.579827e-49 | -8.615850e-47 |
| Msa0547890 | Msa0720690 | 0.809636 | 1.715277e-50 | -8.615850e-47 |
| Msa0547890 | Msa0721280 | 0.805972 | 1.031373e-49 | -8.615850e-47 |
| Msa0547890 | Msa0728440 | 0.807403 | 5.142466e-50 | -8.615850e-47 |
| Msa0547890 | Msa0728630 | 0.822383 | 2.438925e-53 | -8.615850e-47 |
| Msa0547890 | Msa0729720 | 0.862698 | 4.214240e-64 | -8.615850e-47 |
| Msa0547890 | Msa0730430 | 0.808395 | 3.162894e-50 | -8.615850e-47 |
| Msa0547890 | Msa0740510 | 0.826271 | 2.972155e-54 | -8.615850e-47 |
| Msa0547890 | Msa0740640 | 0.802845 | 4.624166e-49 | -8.615850e-47 |
| Msa0547890 | Msa0741240 | 0.826078 | 3.304536e-54 | -8.615850e-47 |
| Msa0547890 | Msa0743720 | 0.814748 | 1.315565e-51 | -8.615850e-47 |
| Msa0547890 | Msa0764830 | 0.806343 | 8.615262e-50 | -8.615850e-47 |
| Msa0547890 | Msa0770080 | 0.857352 | 1.730311e-62 | -8.615850e-47 |
| Msa0547890 | Msa0772410 | 0.806388 | 8.426249e-50 | -8.615850e-47 |
| Msa0547890 | Msa0775190 | 0.801613 | 8.288251e-49 | -8.615850e-47 |
| Msa0547890 | Msa0798430 | 0.819764 | 9.786425e-53 | -8.615850e-47 |
| Msa0547890 | Msa0801760 | 0.806676 | 7.325804e-50 | -8.615850e-47 |
| Msa0547890 | Msa0806800 | 0.802463 | 5.544944e-49 | -8.615850e-47 |
| Msa0547890 | Msa0820770 | 0.831901 | 1.283724e-55 | -8.615850e-47 |
| Msa0547890 | Msa0824680 | 0.816017 | 6.866838e-52 | -8.615850e-47 |
| Msa0547890 | Msa0828560 | 0.811174 | 7.989858e-51 | -8.615850e-47 |
| Msa0547890 | Msa0832340 | 0.824628 | 7.283300e-54 | -8.615850e-47 |
| Msa0547890 | Msa0834770 | 0.811031 | 8.577843e-51 | -8.615850e-47 |
| Msa0547890 | Msa0838580 | 0.832521 | 9.013960e-56 | -8.615850e-47 |
| Msa0547890 | Msa0844240 | 0.803693 | 3.086419e-49 | -8.615850e-47 |
| Msa0547890 | Msa0844570 | 0.826658 | 2.404646e-54 | -8.615850e-47 |
| Msa0547890 | Msa0849100 | 0.817885 | 2.614075e-52 | -8.615850e-47 |
| Msa0547890 | Msa0861090 | 0.826396 | 2.776707e-54 | -8.615850e-47 |
| Msa0547890 | Msa0861540 | 0.817202 | 3.726475e-52 | -8.615850e-47 |
| Msa0547890 | Msa0861870 | 0.830150 | 3.452446e-55 | -8.615850e-47 |
| Msa0547890 | Msa0866270 | 0.813008 | 3.180763e-51 | -8.615850e-47 |
| Msa0547890 | Msa0876190 | 0.839006 | 2.050889e-57 | -8.615850e-47 |
| Msa0547890 | Msa0878290 | 0.808197 | 3.485561e-50 | -8.615850e-47 |
| Msa0547890 | Msa0880140 | 0.840191 | 1.008578e-57 | -8.615850e-47 |
| Msa0547890 | Msa0881460 | 0.801039 | 1.086742e-48 | -8.615850e-47 |
| Msa0547890 | Msa0893950 | 0.802085 | 6.633166e-49 | -8.615850e-47 |
| Msa0547890 | Msa0896750 | 0.804864 | 1.760186e-49 | -8.615850e-47 |
| Msa0547890 | Msa0909120 | 0.800580 | 1.348379e-48 | -8.615850e-47 |
| Msa0547890 | Msa0909140 | 0.811844 | 5.713745e-51 | -8.615850e-47 |
| Msa0547890 | Msa0922410 | 0.805386 | 1.368613e-49 | -8.615850e-47 |
| Msa0547890 | Msa0924470 | 0.805360 | 1.386342e-49 | -8.615850e-47 |
| Msa0547890 | Msa0933100 | 0.804452 | 2.145647e-49 | -8.615850e-47 |
| Msa0547890 | Msa0933230 | 0.820689 | 6.007096e-53 | -8.615850e-47 |
| Msa0547890 | Msa0933310 | 0.800840 | 1.193030e-48 | -8.615850e-47 |
| Msa0547890 | Msa0938480 | 0.819844 | 9.383125e-53 | -8.615850e-47 |
| Msa0547890 | Msa0944030 | 0.814960 | 1.180756e-51 | -8.615850e-47 |
| Msa0547890 | Msa0953550 | 0.810830 | 9.483314e-51 | -8.615850e-47 |
| Msa0547890 | Msa0954130 | 0.816122 | 6.507475e-52 | -8.615850e-47 |
| Msa0547890 | Msa0954550 | 0.813900 | 2.025451e-51 | -8.615850e-47 |
| Msa0547890 | Msa0969450 | 0.808881 | 2.490286e-50 | -8.615850e-47 |
| Msa0547890 | Msa0969520 | 0.847544 | 1.081677e-59 | -8.615850e-47 |
| Msa0547890 | Msa0974060 | 0.810263 | 1.257104e-50 | -8.615850e-47 |
| Msa0547890 | Msa0980880 | 0.818749 | 1.666690e-52 | -8.615850e-47 |
| Msa0547890 | Msa0990350 | 0.806986 | 6.300019e-50 | -8.615850e-47 |
| Msa0547890 | Msa0992020 | 0.803591 | 3.240776e-49 | -8.615850e-47 |
| Msa0547890 | Msa0993290 | 0.807695 | 4.458356e-50 | -8.615850e-47 |
| Msa0547890 | Msa0993600 | 0.800794 | 1.219428e-48 | -8.615850e-47 |
| Msa0547890 | Msa0993730 | 0.807870 | 4.091291e-50 | -8.615850e-47 |
| Msa0547890 | Msa0993750 | 0.801775 | 7.680745e-49 | -8.615850e-47 |
| Msa0547890 | Msa1002850 | 0.809634 | 1.717800e-50 | -8.615850e-47 |
| Msa0547890 | Msa1004550 | 0.818886 | 1.550816e-52 | -8.615850e-47 |
| Msa0547890 | Msa1004600 | 0.808931 | 2.430148e-50 | -8.615850e-47 |
| Msa0547890 | Msa1010350 | 0.845041 | 5.199975e-59 | -8.615850e-47 |
| Msa0547890 | Msa1014540 | 0.815989 | 6.966791e-52 | -8.615850e-47 |
| Msa0547890 | Msa1019000 | 0.854372 | 1.286348e-61 | -8.615850e-47 |
| Msa0547890 | Msa1019150 | 0.810711 | 1.006477e-50 | -8.615850e-47 |
| Msa0547890 | Msa1030970 | 0.815595 | 8.530675e-52 | -8.615850e-47 |
| Msa0547890 | Msa1043390 | 0.803455 | 3.458008e-49 | -8.615850e-47 |
| Msa0547890 | Msa1043450 | 0.804045 | 2.607739e-49 | -8.615850e-47 |
| Msa0547890 | Msa1046280 | 0.811670 | 6.233879e-51 | -8.615850e-47 |
| Msa0547890 | Msa1075220 | -0.835521 | 1.598390e-56 | -8.615850e-47 |
| Msa0547890 | Msa1075540 | 0.815826 | 7.577875e-52 | -8.615850e-47 |
| Msa0547890 | Msa1078170 | 0.800758 | 1.240196e-48 | -8.615850e-47 |
| Msa0547890 | Msa1081330 | 0.810963 | 8.876462e-51 | -8.615850e-47 |
| Msa0547890 | Msa1082500 | 0.846984 | 1.540024e-59 | -8.615850e-47 |
| Msa0547890 | Msa1083840 | 0.817140 | 3.848717e-52 | -8.615850e-47 |
| Msa0547890 | Msa1084430 | 0.804933 | 1.703063e-49 | -8.615850e-47 |
| Msa0547890 | Msa1085200 | 0.847280 | 1.277559e-59 | -8.615850e-47 |
| Msa0547890 | Msa1088950 | 0.805618 | 1.223990e-49 | -8.615850e-47 |
| Msa0547890 | Msa1090260 | 0.803877 | 2.826912e-49 | -8.615850e-47 |
| Msa0547890 | Msa1093840 | 0.812621 | 3.865650e-51 | -8.615850e-47 |
| Msa0547890 | Msa1099910 | 0.824196 | 9.202200e-54 | -8.615850e-47 |
| Msa0547890 | Msa1100050 | 0.826705 | 2.342443e-54 | -8.615850e-47 |
| Msa0547890 | Msa1106700 | 0.801432 | 9.030531e-49 | -8.615850e-47 |
| Msa0547890 | Msa1108160 | 0.810776 | 9.740628e-51 | -8.615850e-47 |
| Msa0547890 | Msa1116130 | -0.823252 | 1.530477e-53 | -8.615850e-47 |
| Msa0547890 | Msa1119480 | 0.800359 | 1.495553e-48 | -8.615850e-47 |
| Msa0547890 | Msa1124960 | 0.805002 | 1.647406e-49 | -8.615850e-47 |
| Msa0547890 | Msa1129550 | 0.810801 | 9.622181e-51 | -8.615850e-47 |
| Msa0547890 | Msa1129730 | 0.813499 | 2.482229e-51 | -8.615850e-47 |
| Msa0547890 | Msa1131220 | 0.808195 | 3.489178e-50 | -8.615850e-47 |
| Msa0547890 | Msa1134110 | 0.802208 | 6.257743e-49 | -8.615850e-47 |
| Msa0547890 | Msa1135470 | 0.807664 | 4.525645e-50 | -8.615850e-47 |
| Msa0547890 | Msa1137570 | 0.823682 | 1.214217e-53 | -8.615850e-47 |
| Msa0547890 | Msa1139000 | -0.806557 | 7.763420e-50 | -8.615850e-47 |
| Msa0547890 | Msa1143270 | 0.805968 | 1.033288e-49 | -8.615850e-47 |
| Msa0547890 | Msa1147740 | 0.804141 | 2.490240e-49 | -8.615850e-47 |
| Msa0547890 | Msa1147900 | 0.808398 | 3.159101e-50 | -8.615850e-47 |
| Msa0547890 | Msa1151720 | 0.804795 | 1.820122e-49 | -8.615850e-47 |
| Msa0547890 | Msa1151910 | 0.825218 | 5.284753e-54 | -8.615850e-47 |
| Msa0547890 | Msa1154280 | 0.802181 | 6.336951e-49 | -8.615850e-47 |
| Msa0547890 | Msa1162550 | -0.829033 | 6.455431e-55 | -8.615850e-47 |
| Msa0547890 | Msa1168160 | 0.804022 | 2.636883e-49 | -8.615850e-47 |
| Msa0547890 | Msa1172670 | 0.820765 | 5.770078e-53 | -8.615850e-47 |
| Msa0547890 | Msa1174040 | 0.830010 | 3.735544e-55 | -8.615850e-47 |
| Msa0547890 | Msa1188710 | 0.803051 | 4.192588e-49 | -8.615850e-47 |
| Msa0547890 | Msa1189070 | 0.829086 | 6.266979e-55 | -8.615850e-47 |
| Msa0547890 | Msa1193290 | 0.821491 | 3.926291e-53 | -8.615850e-47 |
| Msa0547890 | Msa1196440 | 0.801574 | 8.445059e-49 | -8.615850e-47 |
| Msa0547890 | Msa1199570 | 0.804953 | 1.686318e-49 | -8.615850e-47 |
| Msa0547890 | Msa1201560 | 0.808942 | 2.416527e-50 | -8.615850e-47 |
| Msa0547890 | Msa1204530 | 0.801756 | 7.748374e-49 | -8.615850e-47 |
| Msa0547890 | Msa1207220 | 0.804596 | 2.002606e-49 | -8.615850e-47 |
| Msa0547890 | Msa1211150 | -0.803760 | 2.988344e-49 | -8.615850e-47 |
| Msa0547890 | Msa1212940 | 0.822766 | 1.987561e-53 | -8.615850e-47 |
| Msa0547890 | Msa1221050 | 0.814623 | 1.401974e-51 | -8.615850e-47 |
| Msa0547890 | Msa1222840 | -0.804005 | 2.658672e-49 | -8.615850e-47 |
| Msa0547890 | Msa1226660 | 0.816562 | 5.188518e-52 | -8.615850e-47 |
| Msa0547890 | Msa1233890 | 0.806038 | 9.988095e-50 | -8.615850e-47 |
| Msa0547890 | Msa1242220 | 0.809602 | 1.744523e-50 | -8.615850e-47 |
| Msa0547890 | Msa1244610 | 0.819926 | 8.984332e-53 | -8.615850e-47 |
| Msa0547890 | Msa1250530 | 0.813531 | 2.442189e-51 | -8.615850e-47 |
| Msa0547890 | Msa1253020 | 0.814725 | 1.331257e-51 | -8.615850e-47 |
| Msa0547890 | Msa1271990 | 0.803767 | 2.978680e-49 | -8.615850e-47 |
| Msa0547890 | Msa1276660 | 0.800264 | 1.563533e-48 | -8.615850e-47 |
| Msa0547890 | Msa1279400 | 0.806962 | 6.376663e-50 | -8.615850e-47 |
| Msa0547890 | Msa1283860 | 0.828230 | 1.009132e-54 | -8.615850e-47 |
| Msa0547890 | Msa1284550 | 0.832754 | 7.889876e-56 | -8.615850e-47 |
| Msa0547890 | Msa1284680 | 0.830461 | 2.899063e-55 | -8.615850e-47 |
| Msa0547890 | Msa1286800 | 0.802551 | 5.318123e-49 | -8.615850e-47 |
| Msa0547890 | Msa1294480 | 0.804717 | 1.889304e-49 | -8.615850e-47 |
| Msa0547890 | Msa1294820 | 0.804719 | 1.887125e-49 | -8.615850e-47 |
| Msa0547890 | Msa1303250 | 0.811344 | 7.337501e-51 | -8.615850e-47 |
| Msa0547890 | Msa1305340 | 0.824422 | 8.142382e-54 | -8.615850e-47 |
| Msa0547890 | Msa1306840 | 0.802707 | 4.936342e-49 | -8.615850e-47 |
| Msa0547890 | Msa1306850 | 0.806646 | 7.433460e-50 | -8.615850e-47 |
| Msa0547890 | Msa1308380 | 0.831764 | 1.387500e-55 | -8.615850e-47 |
| Msa0547890 | Msa1313140 | 0.804632 | 1.968382e-49 | -8.615850e-47 |
| Msa0547890 | Msa1313150 | 0.826980 | 2.013782e-54 | -8.615850e-47 |
| Msa0547890 | Msa1322890 | 0.808983 | 2.367978e-50 | -8.615850e-47 |
| Msa0547890 | Msa1324500 | 0.809797 | 1.584445e-50 | -8.615850e-47 |
| Msa0547890 | Msa1328710 | 0.811904 | 5.545119e-51 | -8.615850e-47 |
| Msa0547890 | Msa1331000 | 0.800924 | 1.147295e-48 | -8.615850e-47 |
| Msa0547890 | Msa1336710 | 0.822884 | 1.864977e-53 | -8.615850e-47 |
| Msa0547890 | Msa1340650 | 0.817144 | 3.839945e-52 | -8.615850e-47 |
| Msa0547890 | Msa1353470 | 0.844071 | 9.486711e-59 | -8.615850e-47 |
| Msa0547890 | Msa1353980 | 0.816704 | 4.821134e-52 | -8.615850e-47 |
| Msa0547890 | Msa1357890 | 0.803607 | 3.216478e-49 | -8.615850e-47 |
| Msa0547890 | Msa1359040 | 0.819396 | 1.187432e-52 | -8.615850e-47 |
| Msa0547890 | Msa1361650 | 0.801253 | 9.825031e-49 | -8.615850e-47 |
| Msa0547890 | Msa1367590 | 0.802408 | 5.690964e-49 | -8.615850e-47 |
| Msa0547890 | Msa1370070 | -0.805858 | 1.089575e-49 | -8.615850e-47 |
| Msa0547890 | Msa1372760 | 0.838283 | 3.151980e-57 | -8.615850e-47 |
| Msa0547890 | Msa1374040 | 0.802419 | 5.662135e-49 | -8.615850e-47 |
| Msa0547890 | Msa1374550 | 0.804727 | 1.880058e-49 | -8.615850e-47 |
| Msa0547890 | Msa1375560 | 0.832444 | 9.419192e-56 | -8.615850e-47 |
| Msa0547890 | Msa1382540 | 0.805864 | 1.086590e-49 | -8.615850e-47 |
| Msa0547890 | Msa1384350 | 0.812579 | 3.949943e-51 | -8.615850e-47 |
| Msa0547890 | Msa1397120 | 0.804175 | 2.450587e-49 | -8.615850e-47 |
| Msa0547890 | Msa1398090 | 0.804503 | 2.093412e-49 | -8.615850e-47 |
| Msa0547890 | Msa1403890 | 0.813435 | 2.563728e-51 | -8.615850e-47 |
| Msa0547890 | Msa1407060 | 0.811924 | 5.489361e-51 | -8.615850e-47 |
| Msa0547890 | Msa1409870 | 0.809060 | 2.279862e-50 | -8.615850e-47 |
| Msa0547890 | Msa1409880 | 0.801950 | 7.070314e-49 | -8.615850e-47 |
| Msa0547890 | Msa1411700 | 0.801233 | 9.918768e-49 | -8.615850e-47 |
| Msa0547890 | Msa1422580 | 0.819257 | 1.277206e-52 | -8.615850e-47 |
| Msa0547890 | Msa1423870 | 0.801641 | 8.180764e-49 | -8.615850e-47 |
| Msa0547890 | Msa1423880 | 0.832422 | 9.539804e-56 | -8.615850e-47 |
| Msa0547890 | Msa1424450 | 0.811039 | 8.546013e-51 | -8.615850e-47 |
| Msa0547890 | Msa1433390 | 0.812933 | 3.303517e-51 | -8.615850e-47 |
| Msa0547890 | Msa1435270 | 0.807981 | 3.875623e-50 | -8.615850e-47 |
| Msa0547890 | Msa1439610 | 0.801020 | 1.096318e-48 | -8.615850e-47 |
| Msa0547890 | Msa1442450 | 0.800818 | 1.205606e-48 | -8.615850e-47 |
| Msa0547890 | Msa1451160 | 0.812560 | 3.988019e-51 | -8.615850e-47 |
| Msa0547890 | Msa1451550 | 0.809676 | 1.681775e-50 | -8.615850e-47 |
| Msa0547890 | Msa1452240 | 0.809064 | 2.275475e-50 | -8.615850e-47 |
| Msa0547890 | Msa1454120 | 0.813710 | 2.230519e-51 | -8.615850e-47 |
| Msa0547890 | Msa1458610 | 0.804292 | 2.316489e-49 | -8.615850e-47 |
| Msa0547890 | Msa1460020 | 0.803252 | 3.809955e-49 | -8.615850e-47 |
| Msa0547890 | Msa1460050 | 0.800107 | 1.683185e-48 | -8.615850e-47 |
| Msa0547890 | Msa1462290 | 0.811592 | 6.482423e-51 | -8.615850e-47 |
| Msa0547890 | Msa1464810 | 0.817288 | 3.563618e-52 | -8.615850e-47 |
| Msa0547890 | Msa1464940 | 0.819841 | 9.396375e-53 | -8.615850e-47 |
| Msa0547890 | Msa1465300 | 0.815071 | 1.115441e-51 | -8.615850e-47 |
| Msa0547890 | Msa1466540 | 0.825164 | 5.441918e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547890 | MtrunA17_Chr4g0030781 | 98.034 | 356 | 7 | 0 | 1 | 356 | 1 | 356 | 0.0 | 709 |
| Msa0547890 | MtrunA17_Chr4g0030791 | 98.034 | 356 | 7 | 0 | 1 | 356 | 1 | 356 | 0.0 | 709 |
| Msa0547890 | MtrunA17_Chr4g0036721 | 98.034 | 356 | 7 | 0 | 1 | 356 | 1 | 356 | 0.0 | 709 |
| Msa0547890 | MtrunA17_Chr4g0014171 | 97.753 | 356 | 8 | 0 | 1 | 356 | 1 | 356 | 0.0 | 706 |
| Msa0547890 | MtrunA17_Chr5g0405881 | 83.568 | 213 | 8 | 1 | 144 | 356 | 71 | 256 | 1.91e-122 | 353 |
| Msa0547890 | MtrunA17_Chr8g0380731 | 41.457 | 357 | 206 | 3 | 1 | 354 | 1 | 357 | 4.20e-101 | 302 |
| Msa0547890 | MtrunA17_Chr8g0380741 | 40.517 | 348 | 205 | 2 | 1 | 346 | 1 | 348 | 2.15e-95 | 288 |
| Msa0547890 | MtrunA17_Chr8g0380751 | 40.199 | 301 | 178 | 2 | 29 | 327 | 1 | 301 | 2.64e-83 | 255 |
| Msa0547890 | MtrunA17_Chr7g0227371 | 91.667 | 36 | 3 | 0 | 31 | 66 | 1 | 36 | 6.69e-15 | 69.7 |
| Msa0547890 | MtrunA17_Chr7g0261321 | 28.125 | 160 | 112 | 2 | 196 | 353 | 365 | 523 | 8.46e-13 | 69.3 |
| Msa0547890 | MtrunA17_Chr7g0261321 | 25.389 | 193 | 102 | 5 | 30 | 180 | 61 | 253 | 1.73e-11 | 65.5 |
| Msa0547890 | MtrunA17_Chr2g0326201 | 31.169 | 154 | 98 | 5 | 184 | 333 | 73 | 222 | 2.13e-12 | 66.6 |
| Msa0547890 | MtrunA17_Chr2g0326061 | 28.333 | 180 | 118 | 7 | 181 | 355 | 295 | 468 | 3.11e-12 | 67.4 |
| Msa0547890 | MtrunA17_Chr2g0326191 | 30.061 | 163 | 106 | 5 | 176 | 334 | 288 | 446 | 5.86e-12 | 66.6 |
| Msa0547890 | MtrunA17_Chr2g0326171 | 28.333 | 180 | 118 | 7 | 181 | 355 | 278 | 451 | 6.08e-12 | 66.6 |
| Msa0547890 | MtrunA17_Chr2g0326071 | 27.027 | 185 | 124 | 7 | 176 | 355 | 273 | 451 | 1.64e-11 | 65.1 |
| Msa0547890 | MtrunA17_Chr4g0029921 | 32.743 | 113 | 73 | 3 | 223 | 333 | 307 | 418 | 6.52e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547890 | AT1G07750.1 | 79.775 | 356 | 72 | 0 | 1 | 356 | 1 | 356 | 0.0 | 592 |
| Msa0547890 | AT2G28680.1 | 79.213 | 356 | 74 | 0 | 1 | 356 | 1 | 356 | 0.0 | 588 |
| Msa0547890 | AT1G03890.1 | 24.450 | 409 | 245 | 11 | 5 | 354 | 44 | 447 | 1.12e-30 | 121 |
| Msa0547890 | AT1G03880.1 | 23.214 | 392 | 235 | 9 | 12 | 339 | 42 | 431 | 5.34e-28 | 114 |
| Msa0547890 | AT5G44120.3 | 22.475 | 396 | 234 | 8 | 12 | 336 | 48 | 441 | 3.17e-24 | 103 |
| Msa0547890 | AT5G44120.2 | 23.780 | 328 | 203 | 7 | 54 | 336 | 12 | 337 | 1.44e-20 | 92.0 |
| Msa0547890 | AT4G28520.1 | 25.249 | 301 | 182 | 7 | 78 | 336 | 193 | 492 | 1.23e-17 | 84.3 |
| Msa0547890 | AT2G28490.1 | 23.784 | 370 | 212 | 12 | 51 | 355 | 131 | 495 | 3.77e-15 | 77.0 |
| Msa0547890 | AT4G28520.3 | 30.000 | 140 | 97 | 1 | 197 | 336 | 283 | 421 | 1.23e-14 | 75.1 |
| Msa0547890 | AT5G44120.1 | 24.123 | 228 | 145 | 4 | 136 | 336 | 28 | 254 | 7.31e-14 | 71.6 |
Find 112 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCCATTCTACTTTAATT+TGG | 0.176642 | 4_1:+41440353 | None:intergenic |
| CCTTTCTTGTGTTCCTCTTT+AGG | 0.185981 | 4_1:+41441284 | None:intergenic |
| AGAAAAGGTTGTTGCAATTA+AGG | 0.194128 | 4_1:-41441588 | Msa0547890:CDS |
| CTCTTGTGATTCTGCTTTGC+AGG | 0.207745 | 4_1:-41441102 | Msa0547890:CDS |
| AAGCCAGACTTATACTTAAA+AGG | 0.221397 | 4_1:+41440056 | None:intergenic |
| CGGAAAAGCTTCTCAACTTC+TGG | 0.246295 | 4_1:+41440413 | None:intergenic |
| GGTCCTAATGGAATCTTTAC+TGG | 0.258702 | 4_1:-41441428 | Msa0547890:CDS |
| TGCAGGTTACTTACATTGTT+AGG | 0.269206 | 4_1:-41441085 | Msa0547890:CDS |
| GTGTGTATTTATAAGTATAT+TGG | 0.297298 | 4_1:+41442754 | None:intergenic |
| CTTCCTTTGGTTGGTGAGGT+TGG | 0.336501 | 4_1:-41441179 | Msa0547890:CDS |
| AGGCATGGCTTTGAACTGTT+TGG | 0.348039 | 4_1:-41441264 | Msa0547890:CDS |
| TTGGTTGGTGAGGTTGGTTT+AGG | 0.350208 | 4_1:-41441173 | Msa0547890:CDS |
| ATTTGGAGGAGGGAAGAAAA+TGG | 0.351352 | 4_1:+41440370 | None:intergenic |
| TAGGGGAAGTGGCCGTGTTC+AGG | 0.353324 | 4_1:-41441066 | Msa0547890:CDS |
| GTTCAGGTTGTTGGTGTTGA+TGG | 0.356237 | 4_1:-41441050 | Msa0547890:CDS |
| TGTGGGAAGGGCTTGGGACT+TGG | 0.357118 | 4_1:-41441390 | Msa0547890:CDS |
| GGAAGATCCATGTGCTCTCC+TGG | 0.372229 | 4_1:-41441128 | Msa0547890:CDS |
| CTGAGTTTGTGGGAAGGGCT+TGG | 0.373540 | 4_1:-41441397 | Msa0547890:CDS |
| TGAGTTTGTGGGAAGGGCTT+GGG | 0.376069 | 4_1:-41441396 | Msa0547890:CDS |
| GAGGTACTCTGATTCTTCTA+AGG | 0.392927 | 4_1:-41442476 | Msa0547890:CDS |
| GCAGGTTACTTACATTGTTA+GGG | 0.404646 | 4_1:-41441084 | Msa0547890:CDS |
| GCTGATCTTGTGAGGATTGA+TGG | 0.405011 | 4_1:-41441149 | Msa0547890:CDS |
| AAGGAATTGATTGCCTCAAT+TGG | 0.408989 | 4_1:-41440222 | Msa0547890:three_prime_UTR |
| AAGGTTGCTTATGTTCTTCA+AGG | 0.410175 | 4_1:-41442457 | Msa0547890:intron |
| AACAATGTGAAGACACTTGT+TGG | 0.410461 | 4_1:-41441362 | Msa0547890:CDS |
| GATGCTTTAGCACTCCCCTT+TGG | 0.411635 | 4_1:-41441560 | Msa0547890:CDS |
| ACCAACCAAAGGAAGGTTCT+TGG | 0.412307 | 4_1:+41441187 | None:intergenic |
| AAAGGGATTGTGAAGCTTGA+TGG | 0.412975 | 4_1:-41441326 | Msa0547890:CDS |
| GAACACCAAGAACCTTCCTT+TGG | 0.413394 | 4_1:-41441192 | Msa0547890:CDS |
| TCCATTCTACTTTAATTTGG+AGG | 0.417794 | 4_1:+41440356 | None:intergenic |
| CATGCAAGAATTGTATCTAA+TGG | 0.418961 | 4_1:+41440125 | None:intergenic |
| TACACTTTCTTCGCCGATTG+AGG | 0.424668 | 4_1:+41442613 | None:intergenic |
| AGTGGCCGTGTTCAGGTTGT+TGG | 0.428776 | 4_1:-41441059 | Msa0547890:CDS |
| ATCAAGCTTCACAATCCCTT+TGG | 0.429226 | 4_1:+41441328 | None:intergenic |
| TTGTGTTCCTCTTTAGGCTC+AGG | 0.430393 | 4_1:+41441290 | None:intergenic |
| AATCCAGTAAAGATTCCATT+AGG | 0.431957 | 4_1:+41441425 | None:intergenic |
| AAGTTAGCTCTTCTGAAGAA+TGG | 0.432091 | 4_1:-41442511 | Msa0547890:CDS |
| ACTTACATTGTTAGGGGAAG+TGG | 0.437332 | 4_1:-41441077 | Msa0547890:CDS |
| ACACATGGCTGGAAGTTCTT+CGG | 0.454286 | 4_1:-41440486 | Msa0547890:CDS |
| CATGGCTTTGAACTGTTTGG+AGG | 0.461927 | 4_1:-41441261 | Msa0547890:CDS |
| ACCAAGAACCTTCCTTTGGT+TGG | 0.462283 | 4_1:-41441188 | Msa0547890:CDS |
| TCCTCCAAATTAAAGTAGAA+TGG | 0.462317 | 4_1:-41440357 | Msa0547890:exon |
| CACCATGTCACAACACCAAA+GGG | 0.465835 | 4_1:+41441545 | None:intergenic |
| TCCCCTTTGGTGTTGTGACA+TGG | 0.472969 | 4_1:-41441547 | Msa0547890:CDS |
| GAGTTGGTTGTTCTGTTCCT+CGG | 0.474191 | 4_1:-41441503 | Msa0547890:CDS |
| AGTCTTGGAGACCACTTTGA+AGG | 0.476765 | 4_1:-41441021 | Msa0547890:CDS |
| TTGGAGACCACTTTGAAGGC+TGG | 0.478375 | 4_1:-41441017 | Msa0547890:CDS |
| TTCAACTGAGTTTGTGGGAA+GGG | 0.479133 | 4_1:-41441402 | Msa0547890:CDS |
| AAGCTTCACAATCCCTTTGG+CGG | 0.479301 | 4_1:+41441331 | None:intergenic |
| GATACAGGAAGTGGAGTTGC+TGG | 0.481664 | 4_1:-41441632 | Msa0547890:intron |
| TATCGATCTTTCTCCTCAAT+CGG | 0.484260 | 4_1:-41442626 | Msa0547890:CDS |
| GAACCTTCCTTTGGTTGGTG+AGG | 0.484774 | 4_1:-41441183 | Msa0547890:CDS |
| GAACTGTTTGGAGGCACCAT+TGG | 0.492260 | 4_1:-41441252 | Msa0547890:CDS |
| GCTACCTGAATCAGAAGAAA+AGG | 0.493511 | 4_1:-41441603 | Msa0547890:CDS |
| TCGAAGATTGCTGACAATGA+TGG | 0.499253 | 4_1:-41440960 | Msa0547890:CDS |
| TCAAAGACAGATCAAAATAG+AGG | 0.499442 | 4_1:+41440186 | None:intergenic |
| ATTCTACTTTAATTTGGAGG+AGG | 0.504281 | 4_1:+41440359 | None:intergenic |
| TGGAAGTTCTTCGGTGTGGA+AGG | 0.510879 | 4_1:-41440477 | Msa0547890:CDS |
| CAGCCTTCCTGAGCCTAAAG+AGG | 0.511945 | 4_1:-41441297 | Msa0547890:CDS |
| CAGTCCTGTATTTACACACA+TGG | 0.513502 | 4_1:-41440501 | Msa0547890:CDS |
| CCAGCCATGTGTGTAAATAC+AGG | 0.517118 | 4_1:+41440497 | None:intergenic |
| TTGGATGTTGATATTAAGAA+TGG | 0.538544 | 4_1:-41441233 | Msa0547890:CDS |
| GCTATCACCTACAGTTCTGC+AGG | 0.538663 | 4_1:-41440453 | Msa0547890:CDS |
| TTGGAAAGCAATCCGCCAAA+GGG | 0.540566 | 4_1:-41441343 | Msa0547890:CDS |
| AGATTCCATTAGGACCAGTC+AGG | 0.543055 | 4_1:+41441435 | None:intergenic |
| CCTAAAGAGGAACACAAGAA+AGG | 0.543963 | 4_1:-41441284 | Msa0547890:CDS |
| AAAGGTTGTTGCAATTAAGG+AGG | 0.546053 | 4_1:-41441585 | Msa0547890:CDS |
| TTCTACTTTAATTTGGAGGA+GGG | 0.549544 | 4_1:+41440360 | None:intergenic |
| CCTGTATTTACACACATGGC+TGG | 0.553443 | 4_1:-41440497 | Msa0547890:CDS |
| GTTTAGGAGCTGATCTTGTG+AGG | 0.556251 | 4_1:-41441157 | Msa0547890:CDS |
| GTTCCTCTTTAGGCTCAGGA+AGG | 0.561301 | 4_1:+41441294 | None:intergenic |
| ATGTTACCTTGACGCAACAT+AGG | 0.563061 | 4_1:+41442544 | None:intergenic |
| ATGGTGGATCGTACTACGCT+TGG | 0.563071 | 4_1:-41442582 | Msa0547890:CDS |
| TGTTGATGGTAAGAGAGTCT+TGG | 0.566059 | 4_1:-41441036 | Msa0547890:CDS |
| GCAGAATCACAAGAGAATCC+AGG | 0.572154 | 4_1:+41441110 | None:intergenic |
| TAAGCCCTTAAAACCAATTG+AGG | 0.572854 | 4_1:+41440209 | None:intergenic |
| AGAGAATCCAGGAGAGCACA+TGG | 0.578294 | 4_1:+41441121 | None:intergenic |
| ACTTCAAAAGCACACAAGGC+TGG | 0.580061 | 4_1:-41441476 | Msa0547890:CDS |
| GATGTTGATATTAAGAATGG+TGG | 0.582311 | 4_1:-41441230 | Msa0547890:CDS |
| TGAAAAGAGTGTGATTAGTG+TGG | 0.585210 | 4_1:+41442827 | None:intergenic |
| CGCAACATAGGAAGCTCAGA+AGG | 0.585364 | 4_1:+41442556 | None:intergenic |
| CATCAGCAGTCCTCTTTGAA+CGG | 0.585723 | 4_1:+41440393 | None:intergenic |
| AAGGTTGTTGCAATTAAGGA+GGG | 0.587151 | 4_1:-41441584 | Msa0547890:CDS |
| AAGAAAGTGTACGGTGGTGA+TGG | 0.591740 | 4_1:-41442601 | Msa0547890:CDS |
| TTCTTAATATCAACATCCAA+TGG | 0.592422 | 4_1:+41441236 | None:intergenic |
| GTTGGAAAGCAATCCGCCAA+AGG | 0.593219 | 4_1:-41441344 | Msa0547890:CDS |
| AAAGCAGCCTGCAGAACTGT+AGG | 0.593333 | 4_1:+41440446 | None:intergenic |
| CGATACTTCAAAAGCACACA+AGG | 0.594218 | 4_1:-41441480 | Msa0547890:CDS |
| GATTGCTGACAATGATGGAA+TGG | 0.599379 | 4_1:-41440955 | Msa0547890:CDS |
| AAAGTGTACGGTGGTGATGG+TGG | 0.599662 | 4_1:-41442598 | Msa0547890:CDS |
| CCACCATGTCACAACACCAA+AGG | 0.611673 | 4_1:+41441544 | None:intergenic |
| CAACAAAGAGGACACTGAGT+TGG | 0.612479 | 4_1:-41441519 | Msa0547890:CDS |
| CAACCTCACCAACCAAAGGA+AGG | 0.617830 | 4_1:+41441180 | None:intergenic |
| TTTCAACTGAGTTTGTGGGA+AGG | 0.619355 | 4_1:-41441403 | Msa0547890:CDS |
| CAGGTTACTTACATTGTTAG+GGG | 0.620675 | 4_1:-41441083 | Msa0547890:CDS |
| CAACACCAACAACCTGAACA+CGG | 0.621513 | 4_1:+41441054 | None:intergenic |
| CAATCGGCGAAGAAAGTGTA+CGG | 0.625964 | 4_1:-41442610 | Msa0547890:CDS |
| CAAATCTCCAGCCTTCAAAG+TGG | 0.631181 | 4_1:+41441010 | None:intergenic |
| AAGAGTGTGATTAGTGTGGG+AGG | 0.631347 | 4_1:+41442831 | None:intergenic |
| GAAAAGAGTGTGATTAGTGT+GGG | 0.632848 | 4_1:+41442828 | None:intergenic |
| AGAGGAACACAAGAAAGGCA+TGG | 0.634599 | 4_1:-41441279 | Msa0547890:CDS |
| AAACCAACCTCACCAACCAA+AGG | 0.641668 | 4_1:+41441176 | None:intergenic |
| TGGCTGGAAGTTCTTCGGTG+TGG | 0.642740 | 4_1:-41440481 | Msa0547890:CDS |
| GAGCTTCCTATGTTGCGTCA+AGG | 0.643057 | 4_1:-41442550 | Msa0547890:CDS |
| GAGATTTGTTCATTGTACCG+AGG | 0.645213 | 4_1:-41440995 | Msa0547890:CDS |
| CCTTTGGTGTTGTGACATGG+TGG | 0.659432 | 4_1:-41441544 | Msa0547890:CDS |
| ATGTTGCGTCAAGGTAACAT+TGG | 0.668475 | 4_1:-41442541 | Msa0547890:CDS |
| GACATGGTGGTACAACAAAG+AGG | 0.672878 | 4_1:-41441531 | Msa0547890:CDS |
| TTAGAAGAATCAGAGTACCT+CGG | 0.684154 | 4_1:+41442478 | None:intergenic |
| ACCATGTCACAACACCAAAG+GGG | 0.723908 | 4_1:+41441546 | None:intergenic |
| CTGACAATGATGGAATGGAG+TGG | 0.742748 | 4_1:-41440950 | Msa0547890:CDS |
| TCGGCGAAGAAAGTGTACGG+TGG | 0.763757 | 4_1:-41442607 | Msa0547890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTCAAAAAAGTTGAAA+CGG | - | chr4_1:41440785-41440804 | Msa0547890:intron | 15.0% |
| !!! | TTTTTAACATTTGTATCAAA+CGG | - | chr4_1:41440916-41440935 | Msa0547890:intron | 15.0% |
| !! | TACTACTATAATATCAATAT+TGG | + | chr4_1:41441144-41441163 | None:intergenic | 15.0% |
| !! | TGTAATCAAATATATTTACT+AGG | - | chr4_1:41442230-41442249 | Msa0547890:intron | 15.0% |
| !! | AAGAAAAATAACTATATCTA+AGG | + | chr4_1:41442722-41442741 | None:intergenic | 15.0% |
| !! | GTGTGTATTTATAAGTATAT+TGG | + | chr4_1:41440117-41440136 | None:intergenic | 20.0% |
| !!! | GTTTTATTTGTCATTATGTT+TGG | - | chr4_1:41440657-41440676 | Msa0547890:intron | 20.0% |
| !! | TATGTTTGGATGATTATAAA+AGG | - | chr4_1:41440671-41440690 | Msa0547890:intron | 20.0% |
| !! | ATGTTTGGATGATTATAAAA+GGG | - | chr4_1:41440672-41440691 | Msa0547890:intron | 20.0% |
| !! | TTTGTTAGGGATTATAAAAA+AGG | - | chr4_1:41440715-41440734 | Msa0547890:intron | 20.0% |
| !! | CAGAAAAAAATCACTAAAAT+CGG | - | chr4_1:41440824-41440843 | Msa0547890:intron | 20.0% |
| !!! | AAAAAAATGAATTTCTGAGA+AGG | - | chr4_1:41440849-41440868 | Msa0547890:intron | 20.0% |
| !!! | AACTCTATTTTTATACATCA+TGG | - | chr4_1:41441052-41441071 | Msa0547890:CDS | 20.0% |
| !! | TTCTATTATACCATCAATAT+TGG | + | chr4_1:41441185-41441204 | None:intergenic | 20.0% |
| !! | AACAAATATCAAACAACAAA+AGG | + | chr4_1:41442010-41442029 | None:intergenic | 20.0% |
| !! | AACAAATATCAAACAACAAA+AGG | + | chr4_1:41442010-41442029 | None:intergenic | 20.0% |
| !! | TTTCAAAGAAACACAAATTT+GGG | + | chr4_1:41442158-41442177 | None:intergenic | 20.0% |
| !! | ATTTCAAAGAAACACAAATT+TGG | + | chr4_1:41442159-41442178 | None:intergenic | 20.0% |
| !! | ATCAAATATATTTACTAGGA+AGG | - | chr4_1:41442234-41442253 | Msa0547890:intron | 20.0% |
| !! | ATTTCCATTCTACTTTAATT+TGG | + | chr4_1:41442518-41442537 | None:intergenic | 20.0% |
| !!! | AAGTTTTTTTAGTTTTGTCA+TGG | - | chr4_1:41442538-41442557 | Msa0547890:CDS | 20.0% |
| !!! | GCTTTTATTTTGGATTTATA+AGG | - | chr4_1:41442627-41442646 | Msa0547890:CDS | 20.0% |
| ! | ACACGAAAAAACAAATGAAA+GGG | + | chr4_1:41440190-41440209 | None:intergenic | 25.0% |
| !! | ACTTTTTATGAATGAAGTGT+TGG | + | chr4_1:41440639-41440658 | None:intergenic | 25.0% |
| !!! | TATAAAAGGGTTAGTTTGTT+AGG | - | chr4_1:41440685-41440704 | Msa0547890:intron | 25.0% |
| !!! | ATAAAAGGGTTAGTTTGTTA+GGG | - | chr4_1:41440686-41440705 | Msa0547890:intron | 25.0% |
| !!! | CGATTTTAGTGATTTTTTTC+TGG | + | chr4_1:41440826-41440845 | None:intergenic | 25.0% |
| ! | TCACAAAAGCAGTATAAAAT+AGG | + | chr4_1:41441118-41441137 | None:intergenic | 25.0% |
| ! | TTTGTGATTACCAATATTGA+TGG | - | chr4_1:41441131-41441150 | Msa0547890:CDS | 25.0% |
| ! | TTCTTAATATCAACATCCAA+TGG | + | chr4_1:41441635-41441654 | None:intergenic | 25.0% |
| ! | TTGGATGTTGATATTAAGAA+TGG | - | chr4_1:41441635-41441654 | Msa0547890:intron | 25.0% |
| ! | AGTTAAGAAAAACTCACTTA+GGG | + | chr4_1:41441961-41441980 | None:intergenic | 25.0% |
| ! | AAGTTAAGAAAAACTCACTT+AGG | + | chr4_1:41441962-41441981 | None:intergenic | 25.0% |
| !! | TCTAGTGTATACATAGATTT+TGG | - | chr4_1:41442120-41442139 | Msa0547890:intron | 25.0% |
| ! | CAATATACCTTGATATTACA+AGG | + | chr4_1:41442284-41442303 | None:intergenic | 25.0% |
| !!! | TTTCCTTTTAAGTATAAGTC+TGG | - | chr4_1:41442809-41442828 | Msa0547890:five_prime_UTR | 25.0% |
| CACACGAAAAAACAAATGAA+AGG | + | chr4_1:41440191-41440210 | None:intergenic | 30.0% | |
| ! | TTTTATGTTGATCCCTCAAT+TGG | - | chr4_1:41440521-41440540 | Msa0547890:intron | 30.0% |
| TTTATGTTGATCCCTCAATT+GGG | - | chr4_1:41440522-41440541 | Msa0547890:intron | 30.0% | |
| !!! | TTTTATGAATGAAGTGTTGG+TGG | + | chr4_1:41440636-41440655 | None:intergenic | 30.0% |
| !! | TAAAAGGGTTAGTTTGTTAG+GGG | - | chr4_1:41440687-41440706 | Msa0547890:intron | 30.0% |
| TAACATTTGTATCAAACGGA+TGG | - | chr4_1:41440920-41440939 | Msa0547890:intron | 30.0% | |
| ATGAGAAAAGCTATACCAAA+GGG | - | chr4_1:41440995-41441014 | Msa0547890:CDS | 30.0% | |
| TGTTGTGATACTTAATAGTG+AGG | - | chr4_1:41441206-41441225 | Msa0547890:CDS | 30.0% | |
| AGAAAAGGTTGTTGCAATTA+AGG | - | chr4_1:41441280-41441299 | Msa0547890:CDS | 30.0% | |
| !!! | TTTACTGATTTTTTCCTGAC+TGG | - | chr4_1:41441419-41441438 | Msa0547890:CDS | 30.0% |
| AATCCAGTAAAGATTCCATT+AGG | + | chr4_1:41441446-41441465 | None:intergenic | 30.0% | |
| GATGTTGATATTAAGAATGG+TGG | - | chr4_1:41441638-41441657 | Msa0547890:intron | 30.0% | |
| GTTAAGAAAAACTCACTTAG+GGG | + | chr4_1:41441960-41441979 | None:intergenic | 30.0% | |
| ATACTTATGATTTCTTACCG+TGG | - | chr4_1:41442330-41442349 | Msa0547890:intron | 30.0% | |
| CTGAAAAAACAACAATACCA+CGG | + | chr4_1:41442350-41442369 | None:intergenic | 30.0% | |
| !! | TTCTACTTTAATTTGGAGGA+GGG | + | chr4_1:41442511-41442530 | None:intergenic | 30.0% |
| !! | ATTCTACTTTAATTTGGAGG+AGG | + | chr4_1:41442512-41442531 | None:intergenic | 30.0% |
| TCCTCCAAATTAAAGTAGAA+TGG | - | chr4_1:41442511-41442530 | Msa0547890:CDS | 30.0% | |
| !! | TCCATTCTACTTTAATTTGG+AGG | + | chr4_1:41442515-41442534 | None:intergenic | 30.0% |
| !!! | TTTTAGTTTTGTCATGGCAT+TGG | - | chr4_1:41442544-41442563 | Msa0547890:CDS | 30.0% |
| !! | AAGTTTCTGCGCTTTTATTT+TGG | - | chr4_1:41442617-41442636 | Msa0547890:CDS | 30.0% |
| !!! | ATTGCCTCAATTGGTTTTAA+GGG | - | chr4_1:41442655-41442674 | Msa0547890:five_prime_UTR | 30.0% |
| TCAAAGACAGATCAAAATAG+AGG | + | chr4_1:41442685-41442704 | None:intergenic | 30.0% | |
| CATGCAAGAATTGTATCTAA+TGG | + | chr4_1:41442746-41442765 | None:intergenic | 30.0% | |
| AAGCCAGACTTATACTTAAA+AGG | + | chr4_1:41442815-41442834 | None:intergenic | 30.0% | |
| ! | GAAAAGAGTGTGATTAGTGT+GGG | + | chr4_1:41440043-41440062 | None:intergenic | 35.0% |
| ! | TGAAAAGAGTGTGATTAGTG+TGG | + | chr4_1:41440044-41440063 | None:intergenic | 35.0% |
| !!! | GATTTTTTGTGTCGTTGCTA+TGG | - | chr4_1:41440218-41440237 | Msa0547890:three_prime_UTR | 35.0% |
| TATCGATCTTTCTCCTCAAT+CGG | - | chr4_1:41440242-41440261 | Msa0547890:three_prime_UTR | 35.0% | |
| ! | AAGTTAGCTCTTCTGAAGAA+TGG | - | chr4_1:41440357-41440376 | Msa0547890:exon | 35.0% |
| ! | TTAGAAGAATCAGAGTACCT+CGG | + | chr4_1:41440393-41440412 | None:intergenic | 35.0% |
| AAGGTTGCTTATGTTCTTCA+AGG | - | chr4_1:41440411-41440430 | Msa0547890:CDS | 35.0% | |
| TTATGTTGATCCCTCAATTG+GGG | - | chr4_1:41440523-41440542 | Msa0547890:intron | 35.0% | |
| !! | AAAAGGGTTAGTTTGTTAGG+GGG | - | chr4_1:41440688-41440707 | Msa0547890:intron | 35.0% |
| !! | AGTTGAAACGGTTTTGTGTT+TGG | - | chr4_1:41440797-41440816 | Msa0547890:intron | 35.0% |
| CATGAGAAAAGCTATACCAA+AGG | - | chr4_1:41440994-41441013 | Msa0547890:CDS | 35.0% | |
| !! | TAGTGAGGATTTGTTGATAC+AGG | - | chr4_1:41441221-41441240 | Msa0547890:CDS | 35.0% |
| ! | ACAACCTTTTCTTCTGATTC+AGG | + | chr4_1:41441272-41441291 | None:intergenic | 35.0% |
| AAAGGTTGTTGCAATTAAGG+AGG | - | chr4_1:41441283-41441302 | Msa0547890:CDS | 35.0% | |
| AAGGTTGTTGCAATTAAGGA+GGG | - | chr4_1:41441284-41441303 | Msa0547890:CDS | 35.0% | |
| ! | TGGATTTTCAACTGAGTTTG+TGG | - | chr4_1:41441460-41441479 | Msa0547890:CDS | 35.0% |
| ! | GGATTTTCAACTGAGTTTGT+GGG | - | chr4_1:41441461-41441480 | Msa0547890:CDS | 35.0% |
| AACAATGTGAAGACACTTGT+TGG | - | chr4_1:41441506-41441525 | Msa0547890:CDS | 35.0% | |
| TGCAGGTTACTTACATTGTT+AGG | - | chr4_1:41441783-41441802 | Msa0547890:intron | 35.0% | |
| GCAGGTTACTTACATTGTTA+GGG | - | chr4_1:41441784-41441803 | Msa0547890:intron | 35.0% | |
| CAGGTTACTTACATTGTTAG+GGG | - | chr4_1:41441785-41441804 | Msa0547890:intron | 35.0% | |
| TTCGAAACAACGAAAAACCT+CGG | + | chr4_1:41441893-41441912 | None:intergenic | 35.0% | |
| TAGACAGATAATGAGTGCAT+CGG | + | chr4_1:41442104-41442123 | None:intergenic | 35.0% | |
| AAGGAATTGATTGCCTCAAT+TGG | - | chr4_1:41442646-41442665 | Msa0547890:exon | 35.0% | |
| !!! | GATTGCCTCAATTGGTTTTA+AGG | - | chr4_1:41442654-41442673 | Msa0547890:five_prime_UTR | 35.0% |
| TAAGCCCTTAAAACCAATTG+AGG | + | chr4_1:41442662-41442681 | None:intergenic | 35.0% | |
| !!! | GTTTTTGAGTGCATGTGGTT+AGG | + | chr4_1:41440139-41440158 | None:intergenic | 40.0% |
| !!! | GATGTGTTTTTGAGTGCATG+TGG | + | chr4_1:41440144-41440163 | None:intergenic | 40.0% |
| ATGTTACCTTGACGCAACAT+AGG | + | chr4_1:41440327-41440346 | None:intergenic | 40.0% | |
| ATGTTGCGTCAAGGTAACAT+TGG | - | chr4_1:41440327-41440346 | Msa0547890:three_prime_UTR | 40.0% | |
| ! | GAGGTACTCTGATTCTTCTA+AGG | - | chr4_1:41440392-41440411 | Msa0547890:CDS | 40.0% |
| GCTATCATAACCCCAATTGA+GGG | + | chr4_1:41440536-41440555 | None:intergenic | 40.0% | |
| TGCTATCATAACCCCAATTG+AGG | + | chr4_1:41440537-41440556 | None:intergenic | 40.0% | |
| ! | ACGTCGTCAATCAAAAGTGT+CGG | + | chr4_1:41440601-41440620 | None:intergenic | 40.0% |
| !! | TGTTAGGGGGTTAGTTTGTT+AGG | - | chr4_1:41440701-41440720 | Msa0547890:intron | 40.0% |
| !! | GTTAGGGGGTTAGTTTGTTA+GGG | - | chr4_1:41440702-41440721 | Msa0547890:intron | 40.0% |
| AACGAAATCAAAGAGCCCTT+TGG | + | chr4_1:41441013-41441032 | None:intergenic | 40.0% | |
| !! | GGATTTGTTGATACAGGAAG+TGG | - | chr4_1:41441227-41441246 | Msa0547890:CDS | 40.0% |
| GCTACCTGAATCAGAAGAAA+AGG | - | chr4_1:41441265-41441284 | Msa0547890:CDS | 40.0% | |
| ! | CGATACTTCAAAAGCACACA+AGG | - | chr4_1:41441388-41441407 | Msa0547890:CDS | 40.0% |
| !! | TTTTTCCTGACTGGTCCTAA+TGG | - | chr4_1:41441428-41441447 | Msa0547890:CDS | 40.0% |
| GGTCCTAATGGAATCTTTAC+TGG | - | chr4_1:41441440-41441459 | Msa0547890:CDS | 40.0% | |
| TTTCAACTGAGTTTGTGGGA+AGG | - | chr4_1:41441465-41441484 | Msa0547890:CDS | 40.0% | |
| TTCAACTGAGTTTGTGGGAA+GGG | - | chr4_1:41441466-41441485 | Msa0547890:CDS | 40.0% | |
| ATCAAGCTTCACAATCCCTT+TGG | + | chr4_1:41441543-41441562 | None:intergenic | 40.0% | |
| AAAGGGATTGTGAAGCTTGA+TGG | - | chr4_1:41441542-41441561 | Msa0547890:CDS | 40.0% | |
| CCTTTCTTGTGTTCCTCTTT+AGG | + | chr4_1:41441587-41441606 | None:intergenic | 40.0% | |
| CCTAAAGAGGAACACAAGAA+AGG | - | chr4_1:41441584-41441603 | Msa0547890:CDS | 40.0% | |
| ACTTACATTGTTAGGGGAAG+TGG | - | chr4_1:41441791-41441810 | Msa0547890:intron | 40.0% | |
| !! | TGTTGATGGTAAGAGAGTCT+TGG | - | chr4_1:41441832-41441851 | Msa0547890:intron | 40.0% |
| ! | GAGATTTGTTCATTGTACCG+AGG | - | chr4_1:41441873-41441892 | Msa0547890:intron | 40.0% |
| TCGAAGATTGCTGACAATGA+TGG | - | chr4_1:41441908-41441927 | Msa0547890:intron | 40.0% | |
| ! | GATTGCTGACAATGATGGAA+TGG | - | chr4_1:41441913-41441932 | Msa0547890:intron | 40.0% |
| CCTTGATATTACAAGGCTAG+TGG | + | chr4_1:41442277-41442296 | None:intergenic | 40.0% | |
| !! | CCACTAGCCTTGTAATATCA+AGG | - | chr4_1:41442274-41442293 | Msa0547890:intron | 40.0% |
| CAGTCCTGTATTTACACACA+TGG | - | chr4_1:41442367-41442386 | Msa0547890:intron | 40.0% | |
| ! | AGAAGCTTTTCCGTTCAAAG+AGG | - | chr4_1:41442465-41442484 | Msa0547890:CDS | 40.0% |
| ATTTGGAGGAGGGAAGAAAA+TGG | + | chr4_1:41442501-41442520 | None:intergenic | 40.0% | |
| ! | TACACTTTCTTCGCCGATTG+AGG | + | chr4_1:41440258-41440277 | None:intergenic | 45.0% |
| ! | CAATCGGCGAAGAAAGTGTA+CGG | - | chr4_1:41440258-41440277 | Msa0547890:three_prime_UTR | 45.0% |
| ! | AAGAAAGTGTACGGTGGTGA+TGG | - | chr4_1:41440267-41440286 | Msa0547890:three_prime_UTR | 45.0% |
| !!! | AGAATGGTTTTGCTGTTCCG+AGG | - | chr4_1:41440373-41440392 | Msa0547890:CDS | 45.0% |
| GCCATAAATCCTATTCTCCG+TGG | - | chr4_1:41440573-41440592 | Msa0547890:intron | 45.0% | |
| GCCACGGAGAATAGGATTTA+TGG | + | chr4_1:41440577-41440596 | None:intergenic | 45.0% | |
| !! | AATCAAAAGTGTCGGTGCCA+CGG | + | chr4_1:41440593-41440612 | None:intergenic | 45.0% |
| ACCATGTCACAACACCAAAG+GGG | + | chr4_1:41441325-41441344 | None:intergenic | 45.0% | |
| CACCATGTCACAACACCAAA+GGG | + | chr4_1:41441326-41441345 | None:intergenic | 45.0% | |
| GACATGGTGGTACAACAAAG+AGG | - | chr4_1:41441337-41441356 | Msa0547890:CDS | 45.0% | |
| CAACAAAGAGGACACTGAGT+TGG | - | chr4_1:41441349-41441368 | Msa0547890:CDS | 45.0% | |
| ! | GAGTTGGTTGTTCTGTTCCT+CGG | - | chr4_1:41441365-41441384 | Msa0547890:CDS | 45.0% |
| ! | ACTTCAAAAGCACACAAGGC+TGG | - | chr4_1:41441392-41441411 | Msa0547890:CDS | 45.0% |
| AGATTCCATTAGGACCAGTC+AGG | + | chr4_1:41441436-41441455 | None:intergenic | 45.0% | |
| TTGGAAAGCAATCCGCCAAA+GGG | - | chr4_1:41441525-41441544 | Msa0547890:CDS | 45.0% | |
| AAGCTTCACAATCCCTTTGG+CGG | + | chr4_1:41441540-41441559 | None:intergenic | 45.0% | |
| TTGTGTTCCTCTTTAGGCTC+AGG | + | chr4_1:41441581-41441600 | None:intergenic | 45.0% | |
| AGAGGAACACAAGAAAGGCA+TGG | - | chr4_1:41441589-41441608 | Msa0547890:CDS | 45.0% | |
| !! | AGGCATGGCTTTGAACTGTT+TGG | - | chr4_1:41441604-41441623 | Msa0547890:CDS | 45.0% |
| !! | CATGGCTTTGAACTGTTTGG+AGG | - | chr4_1:41441607-41441626 | Msa0547890:CDS | 45.0% |
| GAACACCAAGAACCTTCCTT+TGG | - | chr4_1:41441676-41441695 | Msa0547890:intron | 45.0% | |
| ACCAAGAACCTTCCTTTGGT+TGG | - | chr4_1:41441680-41441699 | Msa0547890:intron | 45.0% | |
| ACCAACCAAAGGAAGGTTCT+TGG | + | chr4_1:41441684-41441703 | None:intergenic | 45.0% | |
| AAACCAACCTCACCAACCAA+AGG | + | chr4_1:41441695-41441714 | None:intergenic | 45.0% | |
| !! | TTGGTTGGTGAGGTTGGTTT+AGG | - | chr4_1:41441695-41441714 | Msa0547890:intron | 45.0% |
| GTTTAGGAGCTGATCTTGTG+AGG | - | chr4_1:41441711-41441730 | Msa0547890:intron | 45.0% | |
| GCTGATCTTGTGAGGATTGA+TGG | - | chr4_1:41441719-41441738 | Msa0547890:intron | 45.0% | |
| GCAGAATCACAAGAGAATCC+AGG | + | chr4_1:41441761-41441780 | None:intergenic | 45.0% | |
| CTCTTGTGATTCTGCTTTGC+AGG | - | chr4_1:41441766-41441785 | Msa0547890:intron | 45.0% | |
| CAACACCAACAACCTGAACA+CGG | + | chr4_1:41441817-41441836 | None:intergenic | 45.0% | |
| !! | GTTCAGGTTGTTGGTGTTGA+TGG | - | chr4_1:41441818-41441837 | Msa0547890:intron | 45.0% |
| AGTCTTGGAGACCACTTTGA+AGG | - | chr4_1:41441847-41441866 | Msa0547890:intron | 45.0% | |
| CAAATCTCCAGCCTTCAAAG+TGG | + | chr4_1:41441861-41441880 | None:intergenic | 45.0% | |
| ! | CTGACAATGATGGAATGGAG+TGG | - | chr4_1:41441918-41441937 | Msa0547890:intron | 45.0% |
| CCAGCCATGTGTGTAAATAC+AGG | + | chr4_1:41442374-41442393 | None:intergenic | 45.0% | |
| CCTGTATTTACACACATGGC+TGG | - | chr4_1:41442371-41442390 | Msa0547890:intron | 45.0% | |
| ACACATGGCTGGAAGTTCTT+CGG | - | chr4_1:41442382-41442401 | Msa0547890:intron | 45.0% | |
| CGGAAAAGCTTCTCAACTTC+TGG | + | chr4_1:41442458-41442477 | None:intergenic | 45.0% | |
| CATCAGCAGTCCTCTTTGAA+CGG | + | chr4_1:41442478-41442497 | None:intergenic | 45.0% | |
| !! | AAAGTGTACGGTGGTGATGG+TGG | - | chr4_1:41440270-41440289 | Msa0547890:three_prime_UTR | 50.0% |
| !! | ATGGTGGATCGTACTACGCT+TGG | - | chr4_1:41440286-41440305 | Msa0547890:three_prime_UTR | 50.0% |
| CGCAACATAGGAAGCTCAGA+AGG | + | chr4_1:41440315-41440334 | None:intergenic | 50.0% | |
| GAGCTTCCTATGTTGCGTCA+AGG | - | chr4_1:41440318-41440337 | Msa0547890:three_prime_UTR | 50.0% | |
| GATACAGGAAGTGGAGTTGC+TGG | - | chr4_1:41441236-41441255 | Msa0547890:CDS | 50.0% | |
| GATGCTTTAGCACTCCCCTT+TGG | - | chr4_1:41441308-41441327 | Msa0547890:CDS | 50.0% | |
| !! | TCCCCTTTGGTGTTGTGACA+TGG | - | chr4_1:41441321-41441340 | Msa0547890:CDS | 50.0% |
| CCACCATGTCACAACACCAA+AGG | + | chr4_1:41441327-41441346 | None:intergenic | 50.0% | |
| !! | CCTTTGGTGTTGTGACATGG+TGG | - | chr4_1:41441324-41441343 | Msa0547890:CDS | 50.0% |
| !!! | GTGCTTTTGAAGTATCGCCG+AGG | + | chr4_1:41441385-41441404 | None:intergenic | 50.0% |
| TGAGTTTGTGGGAAGGGCTT+GGG | - | chr4_1:41441472-41441491 | Msa0547890:CDS | 50.0% | |
| GTTGGAAAGCAATCCGCCAA+AGG | - | chr4_1:41441524-41441543 | Msa0547890:CDS | 50.0% | |
| GTTCCTCTTTAGGCTCAGGA+AGG | + | chr4_1:41441577-41441596 | None:intergenic | 50.0% | |
| !! | GAACTGTTTGGAGGCACCAT+TGG | - | chr4_1:41441616-41441635 | Msa0547890:CDS | 50.0% |
| ! | GAACCTTCCTTTGGTTGGTG+AGG | - | chr4_1:41441685-41441704 | Msa0547890:intron | 50.0% |
| CAACCTCACCAACCAAAGGA+AGG | + | chr4_1:41441691-41441710 | None:intergenic | 50.0% | |
| !! | CTTCCTTTGGTTGGTGAGGT+TGG | - | chr4_1:41441689-41441708 | Msa0547890:intron | 50.0% |
| ! | AGAGAATCCAGGAGAGCACA+TGG | + | chr4_1:41441750-41441769 | None:intergenic | 50.0% |
| ! | TTGGAGACCACTTTGAAGGC+TGG | - | chr4_1:41441851-41441870 | Msa0547890:intron | 50.0% |
| ! | TGGAAGTTCTTCGGTGTGGA+AGG | - | chr4_1:41442391-41442410 | Msa0547890:intron | 50.0% |
| GCTATCACCTACAGTTCTGC+AGG | - | chr4_1:41442415-41442434 | Msa0547890:intron | 50.0% | |
| AAAGCAGCCTGCAGAACTGT+AGG | + | chr4_1:41442425-41442444 | None:intergenic | 50.0% | |
| ! | TCGGCGAAGAAAGTGTACGG+TGG | - | chr4_1:41440261-41440280 | Msa0547890:three_prime_UTR | 55.0% |
| CTGAGTTTGTGGGAAGGGCT+TGG | - | chr4_1:41441471-41441490 | Msa0547890:CDS | 55.0% | |
| CAGCCTTCCTGAGCCTAAAG+AGG | - | chr4_1:41441571-41441590 | Msa0547890:CDS | 55.0% | |
| GGAAGATCCATGTGCTCTCC+TGG | - | chr4_1:41441740-41441759 | Msa0547890:intron | 55.0% | |
| !! | AGTGGCCGTGTTCAGGTTGT+TGG | - | chr4_1:41441809-41441828 | Msa0547890:intron | 55.0% |
| TGGCTGGAAGTTCTTCGGTG+TGG | - | chr4_1:41442387-41442406 | Msa0547890:intron | 55.0% | |
| !! | GTGTCGGTGCCACGGAGAAT+AGG | + | chr4_1:41440585-41440604 | None:intergenic | 60.0% |
| TGTGGGAAGGGCTTGGGACT+TGG | - | chr4_1:41441478-41441497 | Msa0547890:CDS | 60.0% | |
| TAGGGGAAGTGGCCGTGTTC+AGG | - | chr4_1:41441802-41441821 | Msa0547890:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 41440040 | 41442850 | 41440040 | ID=Msa0547890;Name=Msa0547890 |
| chr4_1 | mRNA | 41440040 | 41442850 | 41440040 | ID=Msa0547890-mRNA-1;Parent=Msa0547890;Name=Msa0547890-mRNA-1;_AED=0.03;_eAED=0.03;_QI=197|1|1|1|1|1|3|327|356 |
| chr4_1 | exon | 41440040 | 41440520 | 41440040 | ID=Msa0547890-mRNA-1:exon:10651;Parent=Msa0547890-mRNA-1 |
| chr4_1 | exon | 41440927 | 41441647 | 41440927 | ID=Msa0547890-mRNA-1:exon:10650;Parent=Msa0547890-mRNA-1 |
| chr4_1 | exon | 41442458 | 41442850 | 41442458 | ID=Msa0547890-mRNA-1:exon:10649;Parent=Msa0547890-mRNA-1 |
| chr4_1 | five_prime_UTR | 41442654 | 41442850 | 41442654 | ID=Msa0547890-mRNA-1:five_prime_utr;Parent=Msa0547890-mRNA-1 |
| chr4_1 | CDS | 41442458 | 41442653 | 41442458 | ID=Msa0547890-mRNA-1:cds;Parent=Msa0547890-mRNA-1 |
| chr4_1 | CDS | 41440927 | 41441647 | 41440927 | ID=Msa0547890-mRNA-1:cds;Parent=Msa0547890-mRNA-1 |
| chr4_1 | CDS | 41440367 | 41440520 | 41440367 | ID=Msa0547890-mRNA-1:cds;Parent=Msa0547890-mRNA-1 |
| chr4_1 | three_prime_UTR | 41440040 | 41440366 | 41440040 | ID=Msa0547890-mRNA-1:three_prime_utr;Parent=Msa0547890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
