Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0993730 | XP_013452347.2 | 60.326 | 184 | 23 | 3 | 1 | 135 | 1 | 183 | 1.66e-56 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0993730 | sp|Q9FLX7|NDUA5_ARATH | 73.077 | 104 | 27 | 1 | 1 | 104 | 1 | 103 | 1.22e-43 | 144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0993730 | I3SP15 | 60.326 | 184 | 23 | 3 | 1 | 135 | 1 | 183 | 7.91e-57 | 184 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0993730 | 0.808235 | 3.421105e-50 | -8.615850e-47 |
| Msa0011660 | Msa0993730 | -0.811760 | 5.960035e-51 | -8.615850e-47 |
| Msa0017510 | Msa0993730 | 0.802830 | 4.656041e-49 | -8.615850e-47 |
| Msa0044000 | Msa0993730 | 0.812023 | 5.222441e-51 | -8.615850e-47 |
| Msa0602870 | Msa0993730 | 0.827446 | 1.557764e-54 | -8.615850e-47 |
| Msa0607050 | Msa0993730 | 0.809456 | 1.875620e-50 | -8.615850e-47 |
| Msa0610430 | Msa0993730 | 0.818806 | 1.617123e-52 | -8.615850e-47 |
| Msa0610840 | Msa0993730 | -0.800782 | 1.226250e-48 | -8.615850e-47 |
| Msa0643890 | Msa0993730 | 0.821918 | 3.126343e-53 | -8.615850e-47 |
| Msa0683730 | Msa0993730 | 0.816352 | 5.781573e-52 | -8.615850e-47 |
| Msa0709400 | Msa0993730 | 0.801113 | 1.049500e-48 | -8.615850e-47 |
| Msa0716690 | Msa0993730 | 0.802214 | 6.239884e-49 | -8.615850e-47 |
| Msa0729720 | Msa0993730 | 0.815647 | 8.304306e-52 | -8.615850e-47 |
| Msa0740510 | Msa0993730 | 0.805308 | 1.421423e-49 | -8.615850e-47 |
| Msa0743720 | Msa0993730 | 0.828996 | 6.587424e-55 | -8.615850e-47 |
| Msa0749290 | Msa0993730 | 0.809214 | 2.113583e-50 | -8.615850e-47 |
| Msa0808080 | Msa0993730 | 0.840258 | 9.687482e-58 | -8.615850e-47 |
| Msa0820770 | Msa0993730 | 0.807177 | 5.742450e-50 | -8.615850e-47 |
| Msa0820850 | Msa0993730 | 0.823913 | 1.072385e-53 | -8.615850e-47 |
| Msa0827040 | Msa0993730 | 0.801489 | 8.790204e-49 | -8.615850e-47 |
| Msa0832340 | Msa0993730 | 0.801857 | 7.386601e-49 | -8.615850e-47 |
| Msa0837600 | Msa0993730 | 0.814549 | 1.456046e-51 | -8.615850e-47 |
| Msa0127800 | Msa0993730 | 0.813181 | 2.915250e-51 | -8.615850e-47 |
| Msa0140820 | Msa0993730 | 0.810340 | 1.210445e-50 | -8.615850e-47 |
| Msa0157290 | Msa0993730 | 0.802372 | 5.788079e-49 | -8.615850e-47 |
| Msa0211150 | Msa0993730 | 0.809073 | 2.266114e-50 | -8.615850e-47 |
| Msa0218780 | Msa0993730 | 0.806936 | 6.455167e-50 | -8.615850e-47 |
| Msa0416300 | Msa0993730 | 0.802923 | 4.456373e-49 | -8.615850e-47 |
| Msa0440750 | Msa0993730 | 0.812054 | 5.142778e-51 | -8.615850e-47 |
| Msa0453350 | Msa0993730 | 0.817505 | 3.185636e-52 | -8.615850e-47 |
| Msa0992020 | Msa0993730 | 0.993215 | 3.232535e-198 | -8.615850e-47 |
| Msa0993730 | Msa0993750 | 0.987866 | 7.886087e-172 | -8.615850e-47 |
| Msa0993730 | Msa1005990 | 0.819739 | 9.913867e-53 | -8.615850e-47 |
| Msa0993730 | Msa1014540 | 0.811078 | 8.378260e-51 | -8.615850e-47 |
| Msa0993730 | Msa1030970 | 0.800142 | 1.655681e-48 | -8.615850e-47 |
| Msa0993730 | Msa1046280 | 0.809395 | 1.932548e-50 | -8.615850e-47 |
| Msa0993730 | Msa1048160 | 0.811214 | 7.828737e-51 | -8.615850e-47 |
| Msa0993730 | Msa1075540 | 0.813539 | 2.431575e-51 | -8.615850e-47 |
| Msa0993730 | Msa1100050 | 0.833365 | 5.561214e-56 | -8.615850e-47 |
| Msa0993730 | Msa1106700 | 0.800543 | 1.372073e-48 | -8.615850e-47 |
| Msa0993730 | Msa1124960 | 0.811520 | 6.718145e-51 | -8.615850e-47 |
| Msa0993730 | Msa1135470 | 0.840377 | 9.018283e-58 | -8.615850e-47 |
| Msa0993730 | Msa1137570 | 0.818299 | 2.106983e-52 | -8.615850e-47 |
| Msa0993730 | Msa1174040 | 0.821066 | 4.918063e-53 | -8.615850e-47 |
| Msa0993730 | Msa1244600 | 0.804830 | 1.789151e-49 | -8.615850e-47 |
| Msa0993730 | Msa1253020 | 0.818041 | 2.410623e-52 | -8.615850e-47 |
| Msa0993730 | Msa1254730 | 0.801202 | 1.006561e-48 | -8.615850e-47 |
| Msa0993730 | Msa1274520 | 0.812005 | 5.269950e-51 | -8.615850e-47 |
| Msa0993730 | Msa1275360 | 0.812485 | 4.140370e-51 | -8.615850e-47 |
| Msa0993730 | Msa1276890 | 0.803090 | 4.115768e-49 | -8.615850e-47 |
| Msa0993730 | Msa1284680 | 0.812319 | 4.500317e-51 | -8.615850e-47 |
| Msa0993730 | Msa1294820 | 0.801293 | 9.642608e-49 | -8.615850e-47 |
| Msa0993730 | Msa1319800 | 0.813504 | 2.474974e-51 | -8.615850e-47 |
| Msa0993730 | Msa1342900 | 0.816325 | 5.861708e-52 | -8.615850e-47 |
| Msa0993730 | Msa1346370 | 0.801839 | 7.449123e-49 | -8.615850e-47 |
| Msa0993730 | Msa1353470 | 0.832325 | 1.008083e-55 | -8.615850e-47 |
| Msa0993730 | Msa1370070 | -0.828683 | 7.843412e-55 | -8.615850e-47 |
| Msa0993730 | Msa1375560 | 0.800167 | 1.636414e-48 | -8.615850e-47 |
| Msa0993730 | Msa1386780 | 0.802800 | 4.724724e-49 | -8.615850e-47 |
| Msa0993730 | Msa1451550 | 0.803023 | 4.248386e-49 | -8.615850e-47 |
| Msa0257460 | Msa0993730 | 0.805326 | 1.408827e-49 | -8.615850e-47 |
| Msa0273900 | Msa0993730 | 0.818356 | 2.045882e-52 | -8.615850e-47 |
| Msa0326480 | Msa0993730 | 0.810784 | 9.702095e-51 | -8.615850e-47 |
| Msa0359030 | Msa0993730 | 0.814665 | 1.372381e-51 | -8.615850e-47 |
| Msa0547890 | Msa0993730 | 0.807870 | 4.091291e-50 | -8.615850e-47 |
| Msa0847770 | Msa0993730 | 0.802743 | 4.854563e-49 | -8.615850e-47 |
| Msa0849030 | Msa0993730 | 0.836705 | 7.999892e-57 | -8.615850e-47 |
| Msa0861090 | Msa0993730 | 0.807500 | 4.904295e-50 | -8.615850e-47 |
| Msa0861130 | Msa0993730 | 0.821413 | 4.091210e-53 | -8.615850e-47 |
| Msa0861870 | Msa0993730 | 0.801039 | 1.086434e-48 | -8.615850e-47 |
| Msa0876190 | Msa0993730 | 0.817121 | 3.886938e-52 | -8.615850e-47 |
| Msa0880140 | Msa0993730 | 0.801548 | 8.548077e-49 | -8.615850e-47 |
| Msa0881460 | Msa0993730 | 0.803568 | 3.276818e-49 | -8.615850e-47 |
| Msa0958360 | Msa0993730 | 0.983964 | 3.328393e-159 | -8.615850e-47 |
| Msa0963270 | Msa0993730 | 0.801217 | 9.991855e-49 | -8.615850e-47 |
| Msa0969520 | Msa0993730 | 0.804046 | 2.607199e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0993730 | MtrunA17_Chr6g0470231 | 60.326 | 184 | 23 | 3 | 1 | 135 | 87 | 269 | 3.51e-60 | 186 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0993730 | AT5G52840.2 | 72.642 | 106 | 28 | 1 | 1 | 106 | 1 | 105 | 6.80e-46 | 145 |
| Msa0993730 | AT5G52840.1 | 73.077 | 104 | 27 | 1 | 1 | 104 | 1 | 103 | 1.24e-44 | 144 |
Find 30 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGATTCAACAGTCTTTC+AGG | 0.170090 | 6_4:+66777610 | Msa0993730:three_prime_UTR |
| ATTTAGTTTGATGAAATAAA+AGG | 0.246089 | 6_4:-66777570 | None:intergenic |
| TTACGATACCCTTTGTCTTC+TGG | 0.257585 | 6_4:-66775629 | None:intergenic |
| TCAACCAGTTCAAGTTGTTT+TGG | 0.282704 | 6_4:-66777648 | None:intergenic |
| CTTTACGCGTCTTGGACTTA+AGG | 0.317074 | 6_4:+66775667 | Msa0993730:CDS |
| TGCTCCAAAACAACTTGAAC+TGG | 0.351627 | 6_4:+66777644 | Msa0993730:three_prime_UTR |
| ATTAACACTTCTCTTGCGTT+TGG | 0.354432 | 6_4:-66775566 | None:intergenic |
| TTAACACTTCTCTTGCGTTT+GGG | 0.383857 | 6_4:-66775565 | None:intergenic |
| TTTGTCAAGAAGAAGAATAT+TGG | 0.391623 | 6_4:+66775690 | Msa0993730:CDS |
| TCTAATATAGCTGACGTTCA+TGG | 0.401029 | 6_4:-66777517 | None:intergenic |
| TATTGAGAATCGTCTTGGTT+GGG | 0.401668 | 6_4:+66775718 | Msa0993730:CDS |
| GTTGAAAGCTTTACGCGTCT+TGG | 0.426516 | 6_4:+66775659 | Msa0993730:CDS |
| GACACTAGACGAGATCAAAA+AGG | 0.435244 | 6_4:+66775604 | Msa0993730:CDS |
| AAACTTATTTGCCTTATGAA+TGG | 0.436503 | 6_4:+66775782 | Msa0993730:CDS |
| GAATCGTCTTGGTTGGGGTC+AGG | 0.444696 | 6_4:+66775724 | Msa0993730:CDS |
| CGTCTAGTGTCTTACTATAG+AGG | 0.468796 | 6_4:-66775592 | None:intergenic |
| TCAATGGCCGCGCCGTCGCT+CGG | 0.471122 | 6_4:-66775496 | None:intergenic |
| TCAGATTCAACAGTCTTTCA+GGG | 0.476603 | 6_4:+66777611 | Msa0993730:three_prime_UTR |
| ACAAGAAAAGATGGTGCTGC+TGG | 0.493227 | 6_4:+66777469 | Msa0993730:CDS |
| AAAGGAAAACCACATTCAAA+AGG | 0.501827 | 6_4:-66777552 | None:intergenic |
| ATTGAGAATCGTCTTGGTTG+GGG | 0.506457 | 6_4:+66775719 | Msa0993730:CDS |
| ATGAATATTGAGAATCGTCT+TGG | 0.525507 | 6_4:+66775713 | Msa0993730:CDS |
| ATATTGAGAATCGTCTTGGT+TGG | 0.528056 | 6_4:+66775717 | Msa0993730:CDS |
| AAAAGGTTCCAGAAGACAAA+GGG | 0.534276 | 6_4:+66775621 | Msa0993730:CDS |
| GTAAAATACAGGTTTGTCGA+TGG | 0.573538 | 6_4:+66777420 | Msa0993730:intron |
| AAAACAACAACAGGAATCGT+AGG | 0.600187 | 6_4:+66775530 | Msa0993730:CDS |
| GTGGCTGAAACAAGAAAAGA+TGG | 0.607028 | 6_4:+66777460 | Msa0993730:CDS |
| GGCAAAGATAGAAGAACTTG+TGG | 0.623499 | 6_4:+66777441 | Msa0993730:CDS |
| GAAGATGTTTCTCCGAGCGA+CGG | 0.629217 | 6_4:+66775484 | Msa0993730:exon |
| TGTTTCTCCGAGCGACGGCG+CGG | 0.688196 | 6_4:+66775489 | Msa0993730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTTATTTAATCATATGAT+AGG | - | chr6_4:66775993-66776012 | None:intergenic | 15.0% |
| !!! | ATTTAGTTTGATGAAATAAA+AGG | - | chr6_4:66777573-66777592 | None:intergenic | 15.0% |
| !!! | TTGTTATTTAATCATATGAT+AGG | - | chr6_4:66775993-66776012 | None:intergenic | 15.0% |
| !!! | ATTTAGTTTGATGAAATAAA+AGG | - | chr6_4:66777573-66777592 | None:intergenic | 15.0% |
| !! | CAAAAAAAATACCATTCATA+AGG | - | chr6_4:66775796-66775815 | None:intergenic | 20.0% |
| !! | TTAAGTAGATTATTAGTAAG+TGG | + | chr6_4:66775967-66775986 | Msa0993730:intron | 20.0% |
| !! | TCATATGATTAAATAACAAG+AGG | + | chr6_4:66775994-66776013 | Msa0993730:intron | 20.0% |
| !! | TTCTAGTATTTAACTCTAAT+GGG | - | chr6_4:66776021-66776040 | None:intergenic | 20.0% |
| !! | ATTCTAGTATTTAACTCTAA+TGG | - | chr6_4:66776022-66776041 | None:intergenic | 20.0% |
| !! | GATGGTAATTAAATAAAACA+TGG | - | chr6_4:66776215-66776234 | None:intergenic | 20.0% |
| !! | CAAACAAAAAAATAAACAGA+TGG | - | chr6_4:66776233-66776252 | None:intergenic | 20.0% |
| !!! | CATCTGTTTATTTTTTTGTT+TGG | + | chr6_4:66776231-66776250 | Msa0993730:intron | 20.0% |
| !!! | TTGTTTTTCTTTTGTATCAT+CGG | + | chr6_4:66776360-66776379 | Msa0993730:intron | 20.0% |
| !!! | TTTGTTTTCTCATTGAAAAA+AGG | - | chr6_4:66776978-66776997 | None:intergenic | 20.0% |
| !!! | TTCTATGTTGATTAATATGT+GGG | - | chr6_4:66777020-66777039 | None:intergenic | 20.0% |
| !!! | TTTCTATGTTGATTAATATG+TGG | - | chr6_4:66777021-66777040 | None:intergenic | 20.0% |
| !! | CAAAAAAAATACCATTCATA+AGG | - | chr6_4:66775796-66775815 | None:intergenic | 20.0% |
| !! | TTAAGTAGATTATTAGTAAG+TGG | + | chr6_4:66775967-66775986 | Msa0993730:intron | 20.0% |
| !! | TCATATGATTAAATAACAAG+AGG | + | chr6_4:66775994-66776013 | Msa0993730:intron | 20.0% |
| !! | TTCTAGTATTTAACTCTAAT+GGG | - | chr6_4:66776021-66776040 | None:intergenic | 20.0% |
| !! | ATTCTAGTATTTAACTCTAA+TGG | - | chr6_4:66776022-66776041 | None:intergenic | 20.0% |
| !! | GATGGTAATTAAATAAAACA+TGG | - | chr6_4:66776215-66776234 | None:intergenic | 20.0% |
| !! | CAAACAAAAAAATAAACAGA+TGG | - | chr6_4:66776233-66776252 | None:intergenic | 20.0% |
| !!! | CATCTGTTTATTTTTTTGTT+TGG | + | chr6_4:66776231-66776250 | Msa0993730:intron | 20.0% |
| !!! | TTGTTTTTCTTTTGTATCAT+CGG | + | chr6_4:66776360-66776379 | Msa0993730:intron | 20.0% |
| !!! | TTTGTTTTCTCATTGAAAAA+AGG | - | chr6_4:66776978-66776997 | None:intergenic | 20.0% |
| !!! | TTCTATGTTGATTAATATGT+GGG | - | chr6_4:66777020-66777039 | None:intergenic | 20.0% |
| !!! | TTTCTATGTTGATTAATATG+TGG | - | chr6_4:66777021-66777040 | None:intergenic | 20.0% |
| !! | GTTTTTATTCTTGTCATCAA+TGG | - | chr6_4:66775515-66775534 | None:intergenic | 25.0% |
| ! | ACAAGAATAAAAACAACAAC+AGG | + | chr6_4:66775521-66775540 | Msa0993730:CDS | 25.0% |
| ! | TTTGTCAAGAAGAAGAATAT+TGG | + | chr6_4:66775690-66775709 | Msa0993730:CDS | 25.0% |
| ! | AAACTTATTTGCCTTATGAA+TGG | + | chr6_4:66775782-66775801 | Msa0993730:CDS | 25.0% |
| !!! | ATGGTATTTTTTTTGTGATC+TGG | + | chr6_4:66775801-66775820 | Msa0993730:intron | 25.0% |
| !! | TTCTACTATTTGTTGCAAAT+TGG | + | chr6_4:66775889-66775908 | Msa0993730:intron | 25.0% |
| ! | TAATTAGTAGGTCGTTAATT+AGG | + | chr6_4:66775943-66775962 | Msa0993730:intron | 25.0% |
| ! | TCTAGTATTTAACTCTAATG+GGG | - | chr6_4:66776020-66776039 | None:intergenic | 25.0% |
| ! | AGAATGTTCTCTATATAAAG+CGG | + | chr6_4:66776037-66776056 | Msa0993730:intron | 25.0% |
| ! | ATTTCCATTCGTATGAATAA+AGG | + | chr6_4:66776187-66776206 | Msa0993730:intron | 25.0% |
| !! | TGTTTTTCTTTTGTATCATC+GGG | + | chr6_4:66776361-66776380 | Msa0993730:intron | 25.0% |
| !! | GTAACTTATCATATTTTACC+TGG | + | chr6_4:66776437-66776456 | Msa0993730:intron | 25.0% |
| ! | ATGTGGTTACATTCAATTAT+TGG | + | chr6_4:66776818-66776837 | Msa0993730:intron | 25.0% |
| !!! | TAAGAAAATAGGTTTTTCGA+AGG | - | chr6_4:66777087-66777106 | None:intergenic | 25.0% |
| !!! | TTAAGAGACTGTATTTTAGA+AGG | - | chr6_4:66777302-66777321 | None:intergenic | 25.0% |
| !!! | TCATTTGTTGTGTAAAATAC+AGG | + | chr6_4:66777409-66777428 | Msa0993730:intron | 25.0% |
| ! | AAATAACATTGAACTTTGCA+TGG | + | chr6_4:66777680-66777699 | Msa0993730:three_prime_UTR | 25.0% |
| !! | GTTTTTATTCTTGTCATCAA+TGG | - | chr6_4:66775515-66775534 | None:intergenic | 25.0% |
| ! | ACAAGAATAAAAACAACAAC+AGG | + | chr6_4:66775521-66775540 | Msa0993730:CDS | 25.0% |
| ! | TTTGTCAAGAAGAAGAATAT+TGG | + | chr6_4:66775690-66775709 | Msa0993730:CDS | 25.0% |
| ! | AAACTTATTTGCCTTATGAA+TGG | + | chr6_4:66775782-66775801 | Msa0993730:CDS | 25.0% |
| !!! | ATGGTATTTTTTTTGTGATC+TGG | + | chr6_4:66775801-66775820 | Msa0993730:intron | 25.0% |
| !! | TTCTACTATTTGTTGCAAAT+TGG | + | chr6_4:66775889-66775908 | Msa0993730:intron | 25.0% |
| ! | TAATTAGTAGGTCGTTAATT+AGG | + | chr6_4:66775943-66775962 | Msa0993730:intron | 25.0% |
| ! | TCTAGTATTTAACTCTAATG+GGG | - | chr6_4:66776020-66776039 | None:intergenic | 25.0% |
| ! | AGAATGTTCTCTATATAAAG+CGG | + | chr6_4:66776037-66776056 | Msa0993730:intron | 25.0% |
| ! | ATTTCCATTCGTATGAATAA+AGG | + | chr6_4:66776187-66776206 | Msa0993730:intron | 25.0% |
| !! | TGTTTTTCTTTTGTATCATC+GGG | + | chr6_4:66776361-66776380 | Msa0993730:intron | 25.0% |
| !! | GTAACTTATCATATTTTACC+TGG | + | chr6_4:66776437-66776456 | Msa0993730:intron | 25.0% |
| ! | ATGTGGTTACATTCAATTAT+TGG | + | chr6_4:66776818-66776837 | Msa0993730:intron | 25.0% |
| !!! | TAAGAAAATAGGTTTTTCGA+AGG | - | chr6_4:66777087-66777106 | None:intergenic | 25.0% |
| !!! | TTAAGAGACTGTATTTTAGA+AGG | - | chr6_4:66777302-66777321 | None:intergenic | 25.0% |
| !!! | TCATTTGTTGTGTAAAATAC+AGG | + | chr6_4:66777409-66777428 | Msa0993730:intron | 25.0% |
| ATGAATATTGAGAATCGTCT+TGG | + | chr6_4:66775713-66775732 | Msa0993730:CDS | 30.0% | |
| !! | TTGTGTTTTTGTGAGCTTAT+TGG | + | chr6_4:66775825-66775844 | Msa0993730:intron | 30.0% |
| TGAGCTTATTGGCAATTATT+TGG | + | chr6_4:66775836-66775855 | Msa0993730:intron | 30.0% | |
| ! | TTTGTTGCAAATTGGTAGTT+AGG | + | chr6_4:66775897-66775916 | Msa0993730:intron | 30.0% |
| TAGTTAGGATCTAATATGAG+AGG | + | chr6_4:66775912-66775931 | Msa0993730:intron | 30.0% | |
| AGTTAGGATCTAATATGAGA+GGG | + | chr6_4:66775913-66775932 | Msa0993730:intron | 30.0% | |
| CTATATAAAGCGGAATTCTT+AGG | + | chr6_4:66776047-66776066 | Msa0993730:intron | 30.0% | |
| !!! | ATTCTTAGGTGTTTTAGAGT+AGG | + | chr6_4:66776061-66776080 | Msa0993730:intron | 30.0% |
| ! | ACGGAATAACTTTTCTGTTT+AGG | + | chr6_4:66776084-66776103 | Msa0993730:intron | 30.0% |
| ! | CGGAATAACTTTTCTGTTTA+GGG | + | chr6_4:66776085-66776104 | Msa0993730:intron | 30.0% |
| GTTACTGTTAATTCGATTCT+AGG | + | chr6_4:66776263-66776282 | Msa0993730:intron | 30.0% | |
| ! | TCATTCACACAATTCTAGAA+AGG | - | chr6_4:66776540-66776559 | None:intergenic | 30.0% |
| AATTGTGTGAATGAATACTG+AGG | + | chr6_4:66776546-66776565 | Msa0993730:intron | 30.0% | |
| ATTGTGTGAATGAATACTGA+GGG | + | chr6_4:66776547-66776566 | Msa0993730:intron | 30.0% | |
| ACAATAGATACGGTATAACA+AGG | - | chr6_4:66776600-66776619 | None:intergenic | 30.0% | |
| !!! | CCATTTTTTGTTACACAGAA+TGG | - | chr6_4:66776625-66776644 | None:intergenic | 30.0% |
| CCATTCTGTGTAACAAAAAA+TGG | + | chr6_4:66776622-66776641 | Msa0993730:intron | 30.0% | |
| ATTTGTCACACCAAATTACA+GGG | + | chr6_4:66776666-66776685 | Msa0993730:intron | 30.0% | |
| GTCGAAATTACATCAAAAGT+GGG | - | chr6_4:66776935-66776954 | None:intergenic | 30.0% | |
| TGTCGAAATTACATCAAAAG+TGG | - | chr6_4:66776936-66776955 | None:intergenic | 30.0% | |
| AAAAAGGTAGTGACTTATGA+AGG | - | chr6_4:66776962-66776981 | None:intergenic | 30.0% | |
| AGGAAAAATGAAGTTGAACT+TGG | - | chr6_4:66777067-66777086 | None:intergenic | 30.0% | |
| ! | AAACAGATTGGTGTTCTATT+TGG | - | chr6_4:66777132-66777151 | None:intergenic | 30.0% |
| GTTACTAGAGAAAAACAGAT+TGG | - | chr6_4:66777144-66777163 | None:intergenic | 30.0% | |
| ! | AGTCTCTTAATTTTGTTCAG+TGG | + | chr6_4:66777312-66777331 | Msa0993730:intron | 30.0% |
| !!! | TTCAGTGGTTCTTATTTTTC+TGG | + | chr6_4:66777327-66777346 | Msa0993730:intron | 30.0% |
| ! | TTGAATTCTCCTTTTGAATG+TGG | + | chr6_4:66777543-66777562 | Msa0993730:three_prime_UTR | 30.0% |
| AAAGGAAAACCACATTCAAA+AGG | - | chr6_4:66777555-66777574 | None:intergenic | 30.0% | |
| ATGAATATTGAGAATCGTCT+TGG | + | chr6_4:66775713-66775732 | Msa0993730:CDS | 30.0% | |
| !! | TTGTGTTTTTGTGAGCTTAT+TGG | + | chr6_4:66775825-66775844 | Msa0993730:intron | 30.0% |
| TGAGCTTATTGGCAATTATT+TGG | + | chr6_4:66775836-66775855 | Msa0993730:intron | 30.0% | |
| ! | TTTGTTGCAAATTGGTAGTT+AGG | + | chr6_4:66775897-66775916 | Msa0993730:intron | 30.0% |
| TAGTTAGGATCTAATATGAG+AGG | + | chr6_4:66775912-66775931 | Msa0993730:intron | 30.0% | |
| AGTTAGGATCTAATATGAGA+GGG | + | chr6_4:66775913-66775932 | Msa0993730:intron | 30.0% | |
| CTATATAAAGCGGAATTCTT+AGG | + | chr6_4:66776047-66776066 | Msa0993730:intron | 30.0% | |
| !!! | ATTCTTAGGTGTTTTAGAGT+AGG | + | chr6_4:66776061-66776080 | Msa0993730:intron | 30.0% |
| ! | ACGGAATAACTTTTCTGTTT+AGG | + | chr6_4:66776084-66776103 | Msa0993730:intron | 30.0% |
| ! | CGGAATAACTTTTCTGTTTA+GGG | + | chr6_4:66776085-66776104 | Msa0993730:intron | 30.0% |
| GTTACTGTTAATTCGATTCT+AGG | + | chr6_4:66776263-66776282 | Msa0993730:intron | 30.0% | |
| ! | TCATTCACACAATTCTAGAA+AGG | - | chr6_4:66776540-66776559 | None:intergenic | 30.0% |
| AATTGTGTGAATGAATACTG+AGG | + | chr6_4:66776546-66776565 | Msa0993730:intron | 30.0% | |
| ATTGTGTGAATGAATACTGA+GGG | + | chr6_4:66776547-66776566 | Msa0993730:intron | 30.0% | |
| ACAATAGATACGGTATAACA+AGG | - | chr6_4:66776600-66776619 | None:intergenic | 30.0% | |
| !!! | CCATTTTTTGTTACACAGAA+TGG | - | chr6_4:66776625-66776644 | None:intergenic | 30.0% |
| CCATTCTGTGTAACAAAAAA+TGG | + | chr6_4:66776622-66776641 | Msa0993730:intron | 30.0% | |
| ATTTGTCACACCAAATTACA+GGG | + | chr6_4:66776666-66776685 | Msa0993730:intron | 30.0% | |
| GTCGAAATTACATCAAAAGT+GGG | - | chr6_4:66776935-66776954 | None:intergenic | 30.0% | |
| TGTCGAAATTACATCAAAAG+TGG | - | chr6_4:66776936-66776955 | None:intergenic | 30.0% | |
| AAAAAGGTAGTGACTTATGA+AGG | - | chr6_4:66776962-66776981 | None:intergenic | 30.0% | |
| AGGAAAAATGAAGTTGAACT+TGG | - | chr6_4:66777067-66777086 | None:intergenic | 30.0% | |
| ! | AAACAGATTGGTGTTCTATT+TGG | - | chr6_4:66777132-66777151 | None:intergenic | 30.0% |
| GTTACTAGAGAAAAACAGAT+TGG | - | chr6_4:66777144-66777163 | None:intergenic | 30.0% | |
| ! | AGTCTCTTAATTTTGTTCAG+TGG | + | chr6_4:66777312-66777331 | Msa0993730:intron | 30.0% |
| !!! | TTCAGTGGTTCTTATTTTTC+TGG | + | chr6_4:66777327-66777346 | Msa0993730:intron | 30.0% |
| ! | TTGAATTCTCCTTTTGAATG+TGG | + | chr6_4:66777543-66777562 | Msa0993730:three_prime_UTR | 30.0% |
| AAAGGAAAACCACATTCAAA+AGG | - | chr6_4:66777555-66777574 | None:intergenic | 30.0% | |
| AAAACAACAACAGGAATCGT+AGG | + | chr6_4:66775530-66775549 | Msa0993730:CDS | 35.0% | |
| TTAACACTTCTCTTGCGTTT+GGG | - | chr6_4:66775568-66775587 | None:intergenic | 35.0% | |
| ATTAACACTTCTCTTGCGTT+TGG | - | chr6_4:66775569-66775588 | None:intergenic | 35.0% | |
| AAAAAGGTTCCAGAAGACAA+AGG | + | chr6_4:66775620-66775639 | Msa0993730:CDS | 35.0% | |
| AAAAGGTTCCAGAAGACAAA+GGG | + | chr6_4:66775621-66775640 | Msa0993730:CDS | 35.0% | |
| ATATTGAGAATCGTCTTGGT+TGG | + | chr6_4:66775717-66775736 | Msa0993730:CDS | 35.0% | |
| TATTGAGAATCGTCTTGGTT+GGG | + | chr6_4:66775718-66775737 | Msa0993730:CDS | 35.0% | |
| GCTTATTGGCAATTATTTGG+AGG | + | chr6_4:66775839-66775858 | Msa0993730:intron | 35.0% | |
| !! | GAGGGTGTTAAGTAATTAGT+AGG | + | chr6_4:66775931-66775950 | Msa0993730:intron | 35.0% |
| !!! | TTAGGTGTTTTAGAGTAGGA+CGG | + | chr6_4:66776065-66776084 | Msa0993730:intron | 35.0% |
| !! | TAATTCGATTCTAGGATCCA+TGG | + | chr6_4:66776271-66776290 | Msa0993730:intron | 35.0% |
| !! | AATTCGATTCTAGGATCCAT+GGG | + | chr6_4:66776272-66776291 | Msa0993730:intron | 35.0% |
| ! | TTTTCAGCATCCCAAATGAT+AGG | - | chr6_4:66776300-66776319 | None:intergenic | 35.0% |
| ! | ATTTGGGATGCTGAAAAACT+GGG | + | chr6_4:66776303-66776322 | Msa0993730:intron | 35.0% |
| ! | TTTCTTTTGTATCATCGGGT+TGG | + | chr6_4:66776365-66776384 | Msa0993730:intron | 35.0% |
| ! | AACATAGAGCATTATGTACC+AGG | - | chr6_4:66776458-66776477 | None:intergenic | 35.0% |
| CTCTATGTTGTTCATTCATG+TGG | + | chr6_4:66776469-66776488 | Msa0993730:intron | 35.0% | |
| TTCATGTGGTGTGATGAATT+TGG | + | chr6_4:66776483-66776502 | Msa0993730:intron | 35.0% | |
| TCATGTGGTGTGATGAATTT+GGG | + | chr6_4:66776484-66776503 | Msa0993730:intron | 35.0% | |
| CAGAATGGACACAATAGATA+CGG | - | chr6_4:66776610-66776629 | None:intergenic | 35.0% | |
| GATTTGTCACACCAAATTAC+AGG | + | chr6_4:66776665-66776684 | Msa0993730:intron | 35.0% | |
| CTGTAATCTTCCCTGTAATT+TGG | - | chr6_4:66776679-66776698 | None:intergenic | 35.0% | |
| !! | TGTGGGTTTTATAGTCTTGA+TGG | - | chr6_4:66777003-66777022 | None:intergenic | 35.0% |
| AGTTGAACTTGGCGATTAAT+TGG | - | chr6_4:66777056-66777075 | None:intergenic | 35.0% | |
| ! | GTTCTAGGCTGTAAGAAAAT+AGG | - | chr6_4:66777098-66777117 | None:intergenic | 35.0% |
| GTTCTATTTGGATACAGTTG+TGG | - | chr6_4:66777120-66777139 | None:intergenic | 35.0% | |
| GAACAGAAATGTTGACAAAG+AGG | - | chr6_4:66777217-66777236 | None:intergenic | 35.0% | |
| CAGATAACGACAGACAAATA+GGG | - | chr6_4:66777266-66777285 | None:intergenic | 35.0% | |
| TCAGATAACGACAGACAAAT+AGG | - | chr6_4:66777267-66777286 | None:intergenic | 35.0% | |
| GTCGTTATCTGATATTATCG+AGG | + | chr6_4:66777275-66777294 | Msa0993730:intron | 35.0% | |
| !!! | GTGGTTCTTATTTTTCTGGT+TGG | + | chr6_4:66777331-66777350 | Msa0993730:intron | 35.0% |
| GTAAAATACAGGTTTGTCGA+TGG | + | chr6_4:66777420-66777439 | Msa0993730:intron | 35.0% | |
| !!! | GCTTTTTGGGTTCTTCATTA+GGG | - | chr6_4:66777498-66777517 | None:intergenic | 35.0% |
| TCTAATATAGCTGACGTTCA+TGG | - | chr6_4:66777520-66777539 | None:intergenic | 35.0% | |
| TTCAGATTCAACAGTCTTTC+AGG | + | chr6_4:66777610-66777629 | Msa0993730:three_prime_UTR | 35.0% | |
| TCAGATTCAACAGTCTTTCA+GGG | + | chr6_4:66777611-66777630 | Msa0993730:three_prime_UTR | 35.0% | |
| !!! | TTCAAGTTGTTTTGGAGCAA+AGG | - | chr6_4:66777643-66777662 | None:intergenic | 35.0% |
| !!! | TCAACCAGTTCAAGTTGTTT+TGG | - | chr6_4:66777651-66777670 | None:intergenic | 35.0% |
| AAAACAACAACAGGAATCGT+AGG | + | chr6_4:66775530-66775549 | Msa0993730:CDS | 35.0% | |
| TTAACACTTCTCTTGCGTTT+GGG | - | chr6_4:66775568-66775587 | None:intergenic | 35.0% | |
| ATTAACACTTCTCTTGCGTT+TGG | - | chr6_4:66775569-66775588 | None:intergenic | 35.0% | |
| AAAAAGGTTCCAGAAGACAA+AGG | + | chr6_4:66775620-66775639 | Msa0993730:CDS | 35.0% | |
| AAAAGGTTCCAGAAGACAAA+GGG | + | chr6_4:66775621-66775640 | Msa0993730:CDS | 35.0% | |
| ATATTGAGAATCGTCTTGGT+TGG | + | chr6_4:66775717-66775736 | Msa0993730:CDS | 35.0% | |
| TATTGAGAATCGTCTTGGTT+GGG | + | chr6_4:66775718-66775737 | Msa0993730:CDS | 35.0% | |
| GCTTATTGGCAATTATTTGG+AGG | + | chr6_4:66775839-66775858 | Msa0993730:intron | 35.0% | |
| !! | GAGGGTGTTAAGTAATTAGT+AGG | + | chr6_4:66775931-66775950 | Msa0993730:intron | 35.0% |
| !!! | TTAGGTGTTTTAGAGTAGGA+CGG | + | chr6_4:66776065-66776084 | Msa0993730:intron | 35.0% |
| !! | TAATTCGATTCTAGGATCCA+TGG | + | chr6_4:66776271-66776290 | Msa0993730:intron | 35.0% |
| !! | AATTCGATTCTAGGATCCAT+GGG | + | chr6_4:66776272-66776291 | Msa0993730:intron | 35.0% |
| ! | TTTTCAGCATCCCAAATGAT+AGG | - | chr6_4:66776300-66776319 | None:intergenic | 35.0% |
| ! | ATTTGGGATGCTGAAAAACT+GGG | + | chr6_4:66776303-66776322 | Msa0993730:intron | 35.0% |
| ! | TTTCTTTTGTATCATCGGGT+TGG | + | chr6_4:66776365-66776384 | Msa0993730:intron | 35.0% |
| ! | AACATAGAGCATTATGTACC+AGG | - | chr6_4:66776458-66776477 | None:intergenic | 35.0% |
| CTCTATGTTGTTCATTCATG+TGG | + | chr6_4:66776469-66776488 | Msa0993730:intron | 35.0% | |
| TTCATGTGGTGTGATGAATT+TGG | + | chr6_4:66776483-66776502 | Msa0993730:intron | 35.0% | |
| TCATGTGGTGTGATGAATTT+GGG | + | chr6_4:66776484-66776503 | Msa0993730:intron | 35.0% | |
| CAGAATGGACACAATAGATA+CGG | - | chr6_4:66776610-66776629 | None:intergenic | 35.0% | |
| GATTTGTCACACCAAATTAC+AGG | + | chr6_4:66776665-66776684 | Msa0993730:intron | 35.0% | |
| CTGTAATCTTCCCTGTAATT+TGG | - | chr6_4:66776679-66776698 | None:intergenic | 35.0% | |
| !! | TGTGGGTTTTATAGTCTTGA+TGG | - | chr6_4:66777003-66777022 | None:intergenic | 35.0% |
| AGTTGAACTTGGCGATTAAT+TGG | - | chr6_4:66777056-66777075 | None:intergenic | 35.0% | |
| ! | GTTCTAGGCTGTAAGAAAAT+AGG | - | chr6_4:66777098-66777117 | None:intergenic | 35.0% |
| GTTCTATTTGGATACAGTTG+TGG | - | chr6_4:66777120-66777139 | None:intergenic | 35.0% | |
| GAACAGAAATGTTGACAAAG+AGG | - | chr6_4:66777217-66777236 | None:intergenic | 35.0% | |
| CAGATAACGACAGACAAATA+GGG | - | chr6_4:66777266-66777285 | None:intergenic | 35.0% | |
| TCAGATAACGACAGACAAAT+AGG | - | chr6_4:66777267-66777286 | None:intergenic | 35.0% | |
| GTCGTTATCTGATATTATCG+AGG | + | chr6_4:66777275-66777294 | Msa0993730:intron | 35.0% | |
| !!! | GTGGTTCTTATTTTTCTGGT+TGG | + | chr6_4:66777331-66777350 | Msa0993730:intron | 35.0% |
| GTAAAATACAGGTTTGTCGA+TGG | + | chr6_4:66777420-66777439 | Msa0993730:intron | 35.0% | |
| !!! | GCTTTTTGGGTTCTTCATTA+GGG | - | chr6_4:66777498-66777517 | None:intergenic | 35.0% |
| TCTAATATAGCTGACGTTCA+TGG | - | chr6_4:66777520-66777539 | None:intergenic | 35.0% | |
| TTCAGATTCAACAGTCTTTC+AGG | + | chr6_4:66777610-66777629 | Msa0993730:three_prime_UTR | 35.0% | |
| TCAGATTCAACAGTCTTTCA+GGG | + | chr6_4:66777611-66777630 | Msa0993730:three_prime_UTR | 35.0% | |
| !!! | TTCAAGTTGTTTTGGAGCAA+AGG | - | chr6_4:66777643-66777662 | None:intergenic | 35.0% |
| !!! | TCAACCAGTTCAAGTTGTTT+TGG | - | chr6_4:66777651-66777670 | None:intergenic | 35.0% |
| CGTCTAGTGTCTTACTATAG+AGG | - | chr6_4:66775595-66775614 | None:intergenic | 40.0% | |
| GACACTAGACGAGATCAAAA+AGG | + | chr6_4:66775604-66775623 | Msa0993730:CDS | 40.0% | |
| TTACGATACCCTTTGTCTTC+TGG | - | chr6_4:66775632-66775651 | None:intergenic | 40.0% | |
| ATTGAGAATCGTCTTGGTTG+GGG | + | chr6_4:66775719-66775738 | Msa0993730:CDS | 40.0% | |
| ! | TTTCTGTTTAGGGTCAGAGT+AGG | + | chr6_4:66776095-66776114 | Msa0993730:intron | 40.0% |
| !! | GATTCCTCTTTGAGTTGTGT+CGG | + | chr6_4:66776117-66776136 | Msa0993730:intron | 40.0% |
| GGTGCCTTTATTCATACGAA+TGG | - | chr6_4:66776194-66776213 | None:intergenic | 40.0% | |
| ATCCATGGGTTCCTATCATT+TGG | + | chr6_4:66776286-66776305 | Msa0993730:intron | 40.0% | |
| TCCATGGGTTCCTATCATTT+GGG | + | chr6_4:66776287-66776306 | Msa0993730:intron | 40.0% | |
| ! | CATTTGGGATGCTGAAAAAC+TGG | + | chr6_4:66776302-66776321 | Msa0993730:intron | 40.0% |
| ! | TTTGGGATGCTGAAAAACTG+GGG | + | chr6_4:66776304-66776323 | Msa0993730:intron | 40.0% |
| GAATGAATACTGAGGGAAAC+TGG | + | chr6_4:66776554-66776573 | Msa0993730:intron | 40.0% | |
| TGTCAGATACCAACACATGT+CGG | - | chr6_4:66776793-66776812 | None:intergenic | 40.0% | |
| TGGTATCTGACATCAACATG+TGG | + | chr6_4:66776801-66776820 | Msa0993730:intron | 40.0% | |
| TTGGATACAGTTGTGGTTCT+AGG | - | chr6_4:66777113-66777132 | None:intergenic | 40.0% | |
| TCACTAGTCGTCATAACACA+AGG | - | chr6_4:66777368-66777387 | None:intergenic | 40.0% | |
| GGCAAAGATAGAAGAACTTG+TGG | + | chr6_4:66777441-66777460 | Msa0993730:CDS | 40.0% | |
| GTGGCTGAAACAAGAAAAGA+TGG | + | chr6_4:66777460-66777479 | Msa0993730:CDS | 40.0% | |
| !!! | GGCTTTTTGGGTTCTTCATT+AGG | - | chr6_4:66777499-66777518 | None:intergenic | 40.0% |
| !!! | GTTGTTTTGGAGCAAAGGAT+TGG | - | chr6_4:66777638-66777657 | None:intergenic | 40.0% |
| TGCTCCAAAACAACTTGAAC+TGG | + | chr6_4:66777644-66777663 | Msa0993730:three_prime_UTR | 40.0% | |
| CGTCTAGTGTCTTACTATAG+AGG | - | chr6_4:66775595-66775614 | None:intergenic | 40.0% | |
| GACACTAGACGAGATCAAAA+AGG | + | chr6_4:66775604-66775623 | Msa0993730:CDS | 40.0% | |
| TTACGATACCCTTTGTCTTC+TGG | - | chr6_4:66775632-66775651 | None:intergenic | 40.0% | |
| ATTGAGAATCGTCTTGGTTG+GGG | + | chr6_4:66775719-66775738 | Msa0993730:CDS | 40.0% | |
| ! | TTTCTGTTTAGGGTCAGAGT+AGG | + | chr6_4:66776095-66776114 | Msa0993730:intron | 40.0% |
| !! | GATTCCTCTTTGAGTTGTGT+CGG | + | chr6_4:66776117-66776136 | Msa0993730:intron | 40.0% |
| GGTGCCTTTATTCATACGAA+TGG | - | chr6_4:66776194-66776213 | None:intergenic | 40.0% | |
| ATCCATGGGTTCCTATCATT+TGG | + | chr6_4:66776286-66776305 | Msa0993730:intron | 40.0% | |
| TCCATGGGTTCCTATCATTT+GGG | + | chr6_4:66776287-66776306 | Msa0993730:intron | 40.0% | |
| ! | CATTTGGGATGCTGAAAAAC+TGG | + | chr6_4:66776302-66776321 | Msa0993730:intron | 40.0% |
| ! | TTTGGGATGCTGAAAAACTG+GGG | + | chr6_4:66776304-66776323 | Msa0993730:intron | 40.0% |
| GAATGAATACTGAGGGAAAC+TGG | + | chr6_4:66776554-66776573 | Msa0993730:intron | 40.0% | |
| TGTCAGATACCAACACATGT+CGG | - | chr6_4:66776793-66776812 | None:intergenic | 40.0% | |
| TGGTATCTGACATCAACATG+TGG | + | chr6_4:66776801-66776820 | Msa0993730:intron | 40.0% | |
| TTGGATACAGTTGTGGTTCT+AGG | - | chr6_4:66777113-66777132 | None:intergenic | 40.0% | |
| TCACTAGTCGTCATAACACA+AGG | - | chr6_4:66777368-66777387 | None:intergenic | 40.0% | |
| GGCAAAGATAGAAGAACTTG+TGG | + | chr6_4:66777441-66777460 | Msa0993730:CDS | 40.0% | |
| GTGGCTGAAACAAGAAAAGA+TGG | + | chr6_4:66777460-66777479 | Msa0993730:CDS | 40.0% | |
| !!! | GGCTTTTTGGGTTCTTCATT+AGG | - | chr6_4:66777499-66777518 | None:intergenic | 40.0% |
| !!! | GTTGTTTTGGAGCAAAGGAT+TGG | - | chr6_4:66777638-66777657 | None:intergenic | 40.0% |
| TGCTCCAAAACAACTTGAAC+TGG | + | chr6_4:66777644-66777663 | Msa0993730:three_prime_UTR | 40.0% | |
| GTTGAAAGCTTTACGCGTCT+TGG | + | chr6_4:66775659-66775678 | Msa0993730:CDS | 45.0% | |
| CTTTACGCGTCTTGGACTTA+AGG | + | chr6_4:66775667-66775686 | Msa0993730:CDS | 45.0% | |
| TCCCAAATGATAGGAACCCA+TGG | - | chr6_4:66776291-66776310 | None:intergenic | 45.0% | |
| TCTAAGTGTCCGACATGTGT+TGG | + | chr6_4:66776781-66776800 | Msa0993730:intron | 45.0% | |
| AAAGTGGGCACAACTTGTGT+CGG | - | chr6_4:66776920-66776939 | None:intergenic | 45.0% | |
| TAGGGAGACTTGGAACAAAG+AGG | - | chr6_4:66777248-66777267 | None:intergenic | 45.0% | |
| GACAGACAAATAGGGAGACT+TGG | - | chr6_4:66777258-66777277 | None:intergenic | 45.0% | |
| !! | ACAAGAAAAGATGGTGCTGC+TGG | + | chr6_4:66777469-66777488 | Msa0993730:CDS | 45.0% |
| ! | GCTGACGTTCATGGCTTTTT+GGG | - | chr6_4:66777511-66777530 | None:intergenic | 45.0% |
| ! | AGCTGACGTTCATGGCTTTT+TGG | - | chr6_4:66777512-66777531 | None:intergenic | 45.0% |
| GTTGAAAGCTTTACGCGTCT+TGG | + | chr6_4:66775659-66775678 | Msa0993730:CDS | 45.0% | |
| CTTTACGCGTCTTGGACTTA+AGG | + | chr6_4:66775667-66775686 | Msa0993730:CDS | 45.0% | |
| TCCCAAATGATAGGAACCCA+TGG | - | chr6_4:66776291-66776310 | None:intergenic | 45.0% | |
| TCTAAGTGTCCGACATGTGT+TGG | + | chr6_4:66776781-66776800 | Msa0993730:intron | 45.0% | |
| AAAGTGGGCACAACTTGTGT+CGG | - | chr6_4:66776920-66776939 | None:intergenic | 45.0% | |
| TAGGGAGACTTGGAACAAAG+AGG | - | chr6_4:66777248-66777267 | None:intergenic | 45.0% | |
| GACAGACAAATAGGGAGACT+TGG | - | chr6_4:66777258-66777277 | None:intergenic | 45.0% | |
| !! | ACAAGAAAAGATGGTGCTGC+TGG | + | chr6_4:66777469-66777488 | Msa0993730:CDS | 45.0% |
| ! | GCTGACGTTCATGGCTTTTT+GGG | - | chr6_4:66777511-66777530 | None:intergenic | 45.0% |
| ! | AGCTGACGTTCATGGCTTTT+TGG | - | chr6_4:66777512-66777531 | None:intergenic | 45.0% |
| GAAGATGTTTCTCCGAGCGA+CGG | + | chr6_4:66775484-66775503 | Msa0993730:exon | 50.0% | |
| AGCTCCGACACAACTCAAAG+AGG | - | chr6_4:66776124-66776143 | None:intergenic | 50.0% | |
| TTGTGTCGGAGCTTTGCTCT+GGG | + | chr6_4:66776131-66776150 | Msa0993730:intron | 50.0% | |
| AAGTGGGCACAACTTGTGTC+GGG | - | chr6_4:66776919-66776938 | None:intergenic | 50.0% | |
| GAAGATGTTTCTCCGAGCGA+CGG | + | chr6_4:66775484-66775503 | Msa0993730:exon | 50.0% | |
| AGCTCCGACACAACTCAAAG+AGG | - | chr6_4:66776124-66776143 | None:intergenic | 50.0% | |
| TTGTGTCGGAGCTTTGCTCT+GGG | + | chr6_4:66776131-66776150 | Msa0993730:intron | 50.0% | |
| AAGTGGGCACAACTTGTGTC+GGG | - | chr6_4:66776919-66776938 | None:intergenic | 50.0% | |
| GAATCGTCTTGGTTGGGGTC+AGG | + | chr6_4:66775724-66775743 | Msa0993730:CDS | 55.0% | |
| GTTGTGTCGGAGCTTTGCTC+TGG | + | chr6_4:66776130-66776149 | Msa0993730:intron | 55.0% | |
| AACTTGTGTCGGGGACTCGA+GGG | - | chr6_4:66776909-66776928 | None:intergenic | 55.0% | |
| AGTGGGCACAACTTGTGTCG+GGG | - | chr6_4:66776918-66776937 | None:intergenic | 55.0% | |
| GAATCGTCTTGGTTGGGGTC+AGG | + | chr6_4:66775724-66775743 | Msa0993730:CDS | 55.0% | |
| GTTGTGTCGGAGCTTTGCTC+TGG | + | chr6_4:66776130-66776149 | Msa0993730:intron | 55.0% | |
| AACTTGTGTCGGGGACTCGA+GGG | - | chr6_4:66776909-66776928 | None:intergenic | 55.0% | |
| AGTGGGCACAACTTGTGTCG+GGG | - | chr6_4:66776918-66776937 | None:intergenic | 55.0% | |
| !! | GGGGACTCGAGGGTATCTAG+GGG | - | chr6_4:66776899-66776918 | None:intergenic | 60.0% |
| !! | CGGGGACTCGAGGGTATCTA+GGG | - | chr6_4:66776900-66776919 | None:intergenic | 60.0% |
| !! | TCGGGGACTCGAGGGTATCT+AGG | - | chr6_4:66776901-66776920 | None:intergenic | 60.0% |
| CAACTTGTGTCGGGGACTCG+AGG | - | chr6_4:66776910-66776929 | None:intergenic | 60.0% | |
| !! | GGGGACTCGAGGGTATCTAG+GGG | - | chr6_4:66776899-66776918 | None:intergenic | 60.0% |
| !! | CGGGGACTCGAGGGTATCTA+GGG | - | chr6_4:66776900-66776919 | None:intergenic | 60.0% |
| !! | TCGGGGACTCGAGGGTATCT+AGG | - | chr6_4:66776901-66776920 | None:intergenic | 60.0% |
| CAACTTGTGTCGGGGACTCG+AGG | - | chr6_4:66776910-66776929 | None:intergenic | 60.0% | |
| TGTTTCTCCGAGCGACGGCG+CGG | + | chr6_4:66775489-66775508 | Msa0993730:CDS | 65.0% | |
| TGTTTCTCCGAGCGACGGCG+CGG | + | chr6_4:66775489-66775508 | Msa0993730:CDS | 65.0% | |
| TCAATGGCCGCGCCGTCGCT+CGG | - | chr6_4:66775499-66775518 | None:intergenic | 70.0% | |
| TCAATGGCCGCGCCGTCGCT+CGG | - | chr6_4:66775499-66775518 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 66775466 | 66777701 | 66775466 | ID=Msa0993730;Name=Msa0993730 |
| chr6_4 | mRNA | 66775466 | 66777701 | 66775466 | ID=Msa0993730-mRNA-1;Parent=Msa0993730;Name=Msa0993730-mRNA-1;_AED=0.00;_eAED=0.00;_QI=22|1|1|1|1|1|2|179|135 |
| chr6_4 | exon | 66775466 | 66775803 | 66775466 | ID=Msa0993730-mRNA-1:exon:12427;Parent=Msa0993730-mRNA-1 |
| chr6_4 | exon | 66777431 | 66777701 | 66777431 | ID=Msa0993730-mRNA-1:exon:12428;Parent=Msa0993730-mRNA-1 |
| chr6_4 | five_prime_UTR | 66775466 | 66775487 | 66775466 | ID=Msa0993730-mRNA-1:five_prime_utr;Parent=Msa0993730-mRNA-1 |
| chr6_4 | CDS | 66775488 | 66775803 | 66775488 | ID=Msa0993730-mRNA-1:cds;Parent=Msa0993730-mRNA-1 |
| chr6_4 | CDS | 66777431 | 66777522 | 66777431 | ID=Msa0993730-mRNA-1:cds;Parent=Msa0993730-mRNA-1 |
| chr6_4 | three_prime_UTR | 66777523 | 66777701 | 66777523 | ID=Msa0993730-mRNA-1:three_prime_utr;Parent=Msa0993730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
