Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643890 | XP_003607149.1 | 98.315 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 0.0 | 712 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643890 | sp|Q6K508|GLUD1_ORYSJ | 26.330 | 376 | 201 | 9 | 48 | 350 | 85 | 457 | 2.34e-37 | 143 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0643890 | 0.845353 | 4.283369e-59 | -8.615850e-47 |
| Msa0003700 | Msa0643890 | 0.842291 | 2.828872e-58 | -8.615850e-47 |
| Msa0011170 | Msa0643890 | 0.801547 | 8.551021e-49 | -8.615850e-47 |
| Msa0015390 | Msa0643890 | 0.816322 | 5.870399e-52 | -8.615850e-47 |
| Msa0017510 | Msa0643890 | 0.838879 | 2.211881e-57 | -8.615850e-47 |
| Msa0020930 | Msa0643890 | 0.800238 | 1.583217e-48 | -8.615850e-47 |
| Msa0026130 | Msa0643890 | 0.800612 | 1.327895e-48 | -8.615850e-47 |
| Msa0031340 | Msa0643890 | 0.824430 | 8.104653e-54 | -8.615850e-47 |
| Msa0035150 | Msa0643890 | 0.805441 | 1.332797e-49 | -8.615850e-47 |
| Msa0043560 | Msa0643890 | 0.806206 | 9.205528e-50 | -8.615850e-47 |
| Msa0044000 | Msa0643890 | 0.810988 | 8.765651e-51 | -8.615850e-47 |
| Msa0046100 | Msa0643890 | 0.808327 | 3.270552e-50 | -8.615850e-47 |
| Msa0051020 | Msa0643890 | 0.814811 | 1.274006e-51 | -8.615850e-47 |
| Msa0053780 | Msa0643890 | 0.834328 | 3.194721e-56 | -8.615850e-47 |
| Msa0058490 | Msa0643890 | 0.813919 | 2.005779e-51 | -8.615850e-47 |
| Msa0058510 | Msa0643890 | 0.813872 | 2.054172e-51 | -8.615850e-47 |
| Msa0064350 | Msa0643890 | 0.815335 | 9.747055e-52 | -8.615850e-47 |
| Msa0068680 | Msa0643890 | 0.813194 | 2.896383e-51 | -8.615850e-47 |
| Msa0069330 | Msa0643890 | 0.830703 | 2.529606e-55 | -8.615850e-47 |
| Msa0084080 | Msa0643890 | 0.804386 | 2.214548e-49 | -8.615850e-47 |
| Msa0090360 | Msa0643890 | 0.818627 | 1.776086e-52 | -8.615850e-47 |
| Msa0091600 | Msa0643890 | 0.825689 | 4.087780e-54 | -8.615850e-47 |
| Msa0095560 | Msa0643890 | 0.803671 | 3.119209e-49 | -8.615850e-47 |
| Msa0097840 | Msa0643890 | 0.819175 | 1.333399e-52 | -8.615850e-47 |
| Msa0101270 | Msa0643890 | 0.816328 | 5.851235e-52 | -8.615850e-47 |
| Msa0104550 | Msa0643890 | 0.836960 | 6.889945e-57 | -8.615850e-47 |
| Msa0110970 | Msa0643890 | 0.819796 | 9.622835e-53 | -8.615850e-47 |
| Msa0114060 | Msa0643890 | 0.810890 | 9.203984e-51 | -8.615850e-47 |
| Msa0602870 | Msa0643890 | 0.967951 | 5.456370e-128 | -8.615850e-47 |
| Msa0610430 | Msa0643890 | 0.801332 | 9.467247e-49 | -8.615850e-47 |
| Msa0615710 | Msa0643890 | 0.837414 | 5.271392e-57 | -8.615850e-47 |
| Msa0616020 | Msa0643890 | 0.800217 | 1.598197e-48 | -8.615850e-47 |
| Msa0626090 | Msa0643890 | 0.818971 | 1.483803e-52 | -8.615850e-47 |
| Msa0627450 | Msa0643890 | 0.813964 | 1.960866e-51 | -8.615850e-47 |
| Msa0630120 | Msa0643890 | 0.802621 | 5.142726e-49 | -8.615850e-47 |
| Msa0643890 | Msa0657970 | 0.806662 | 7.377409e-50 | -8.615850e-47 |
| Msa0643890 | Msa0663390 | 0.804652 | 1.949249e-49 | -8.615850e-47 |
| Msa0643890 | Msa0663810 | 0.811582 | 6.513409e-51 | -8.615850e-47 |
| Msa0643890 | Msa0663920 | 0.804934 | 1.701930e-49 | -8.615850e-47 |
| Msa0643890 | Msa0667050 | 0.805070 | 1.594031e-49 | -8.615850e-47 |
| Msa0643890 | Msa0669520 | 0.803000 | 4.296159e-49 | -8.615850e-47 |
| Msa0643890 | Msa0677410 | 0.817277 | 3.585085e-52 | -8.615850e-47 |
| Msa0643890 | Msa0683730 | 0.944707 | 1.187318e-103 | -8.615850e-47 |
| Msa0643890 | Msa0692980 | 0.813647 | 2.302527e-51 | -8.615850e-47 |
| Msa0643890 | Msa0702440 | 0.802085 | 6.632138e-49 | -8.615850e-47 |
| Msa0643890 | Msa0702470 | 0.813869 | 2.057802e-51 | -8.615850e-47 |
| Msa0643890 | Msa0706940 | 0.801756 | 7.746993e-49 | -8.615850e-47 |
| Msa0643890 | Msa0708520 | 0.802616 | 5.155700e-49 | -8.615850e-47 |
| Msa0643890 | Msa0709400 | 0.831682 | 1.453173e-55 | -8.615850e-47 |
| Msa0643890 | Msa0710800 | 0.810164 | 1.320461e-50 | -8.615850e-47 |
| Msa0643890 | Msa0712270 | 0.802537 | 5.351834e-49 | -8.615850e-47 |
| Msa0643890 | Msa0713790 | 0.811653 | 6.286005e-51 | -8.615850e-47 |
| Msa0643890 | Msa0716690 | 0.822344 | 2.490625e-53 | -8.615850e-47 |
| Msa0643890 | Msa0720690 | 0.818331 | 2.072764e-52 | -8.615850e-47 |
| Msa0643890 | Msa0729720 | 0.854005 | 1.641533e-61 | -8.615850e-47 |
| Msa0643890 | Msa0731270 | 0.804055 | 2.594970e-49 | -8.615850e-47 |
| Msa0643890 | Msa0740510 | 0.815997 | 6.938543e-52 | -8.615850e-47 |
| Msa0643890 | Msa0740640 | 0.803322 | 3.684377e-49 | -8.615850e-47 |
| Msa0643890 | Msa0741240 | 0.803172 | 3.957684e-49 | -8.615850e-47 |
| Msa0643890 | Msa0763070 | 0.802862 | 4.585590e-49 | -8.615850e-47 |
| Msa0643890 | Msa0770080 | 0.867878 | 9.889900e-66 | -8.615850e-47 |
| Msa0643890 | Msa0770720 | 0.800150 | 1.649664e-48 | -8.615850e-47 |
| Msa0643890 | Msa0772410 | 0.829664 | 4.534700e-55 | -8.615850e-47 |
| Msa0643890 | Msa0798430 | 0.806455 | 8.156335e-50 | -8.615850e-47 |
| Msa0643890 | Msa0803890 | 0.815068 | 1.117006e-51 | -8.615850e-47 |
| Msa0643890 | Msa0806790 | 0.801431 | 9.031606e-49 | -8.615850e-47 |
| Msa0643890 | Msa0806800 | 0.818541 | 1.857328e-52 | -8.615850e-47 |
| Msa0643890 | Msa0820770 | 0.821952 | 3.071038e-53 | -8.615850e-47 |
| Msa0643890 | Msa0824680 | 0.816026 | 6.835473e-52 | -8.615850e-47 |
| Msa0643890 | Msa0828560 | 0.838225 | 3.262441e-57 | -8.615850e-47 |
| Msa0643890 | Msa0832340 | 0.808712 | 2.707025e-50 | -8.615850e-47 |
| Msa0643890 | Msa0838580 | 0.813134 | 2.985128e-51 | -8.615850e-47 |
| Msa0643890 | Msa0847770 | 0.817253 | 3.629419e-52 | -8.615850e-47 |
| Msa0643890 | Msa0849100 | 0.825340 | 4.945271e-54 | -8.615850e-47 |
| Msa0643890 | Msa0861090 | 0.818215 | 2.201744e-52 | -8.615850e-47 |
| Msa0643890 | Msa0861870 | 0.816568 | 5.172741e-52 | -8.615850e-47 |
| Msa0643890 | Msa0866270 | 0.816238 | 6.130796e-52 | -8.615850e-47 |
| Msa0643890 | Msa0876190 | 0.832321 | 1.010572e-55 | -8.615850e-47 |
| Msa0643890 | Msa0878290 | 0.802570 | 5.269646e-49 | -8.615850e-47 |
| Msa0643890 | Msa0880020 | 0.812020 | 5.231002e-51 | -8.615850e-47 |
| Msa0643890 | Msa0880140 | 0.835508 | 1.610776e-56 | -8.615850e-47 |
| Msa0643890 | Msa0881460 | 0.848310 | 6.650738e-60 | -8.615850e-47 |
| Msa0643890 | Msa0896970 | 0.807457 | 5.008316e-50 | -8.615850e-47 |
| Msa0643890 | Msa0909140 | 0.801821 | 7.512859e-49 | -8.615850e-47 |
| Msa0643890 | Msa0924470 | 0.827086 | 1.899407e-54 | -8.615850e-47 |
| Msa0643890 | Msa0938480 | 0.807351 | 5.274088e-50 | -8.615850e-47 |
| Msa0643890 | Msa0944030 | 0.804827 | 1.791957e-49 | -8.615850e-47 |
| Msa0643890 | Msa0947660 | 0.825968 | 3.509092e-54 | -8.615850e-47 |
| Msa0643890 | Msa0958360 | 0.800899 | 1.160759e-48 | -8.615850e-47 |
| Msa0643890 | Msa0963270 | 0.828526 | 8.559033e-55 | -8.615850e-47 |
| Msa0643890 | Msa0969520 | 0.826121 | 3.226837e-54 | -8.615850e-47 |
| Msa0643890 | Msa0992020 | 0.823708 | 1.197818e-53 | -8.615850e-47 |
| Msa0643890 | Msa0993730 | 0.821918 | 3.126343e-53 | -8.615850e-47 |
| Msa0643890 | Msa0993750 | 0.804866 | 1.758346e-49 | -8.615850e-47 |
| Msa0643890 | Msa0997970 | 0.850202 | 1.977796e-60 | -8.615850e-47 |
| Msa0643890 | Msa1004550 | 0.801146 | 1.033112e-48 | -8.615850e-47 |
| Msa0643890 | Msa1004600 | 0.802171 | 6.367484e-49 | -8.615850e-47 |
| Msa0643890 | Msa1010350 | 0.802259 | 6.107483e-49 | -8.615850e-47 |
| Msa0643890 | Msa1013770 | 0.800074 | 1.709186e-48 | -8.615850e-47 |
| Msa0643890 | Msa1019000 | 0.804000 | 2.665414e-49 | -8.615850e-47 |
| Msa0643890 | Msa1039800 | 0.801851 | 7.407744e-49 | -8.615850e-47 |
| Msa0643890 | Msa1040400 | 0.814138 | 1.794924e-51 | -8.615850e-47 |
| Msa0643890 | Msa1046280 | 0.839219 | 1.806108e-57 | -8.615850e-47 |
| Msa0643890 | Msa1066490 | 0.803581 | 3.256027e-49 | -8.615850e-47 |
| Msa0643890 | Msa1075220 | -0.813122 | 3.003373e-51 | -8.615850e-47 |
| Msa0643890 | Msa1075540 | 0.813693 | 2.249612e-51 | -8.615850e-47 |
| Msa0643890 | Msa1078170 | 0.826113 | 3.242560e-54 | -8.615850e-47 |
| Msa0643890 | Msa1079590 | 0.825411 | 4.756997e-54 | -8.615850e-47 |
| Msa0643890 | Msa1079740 | 0.815635 | 8.356154e-52 | -8.615850e-47 |
| Msa0643890 | Msa1082500 | 0.818387 | 2.013117e-52 | -8.615850e-47 |
| Msa0643890 | Msa1085200 | 0.830465 | 2.893219e-55 | -8.615850e-47 |
| Msa0643890 | Msa1087480 | 0.807223 | 5.614353e-50 | -8.615850e-47 |
| Msa0643890 | Msa1093840 | 0.813969 | 1.955130e-51 | -8.615850e-47 |
| Msa0643890 | Msa1099910 | 0.800883 | 1.169362e-48 | -8.615850e-47 |
| Msa0643890 | Msa1100050 | 0.800205 | 1.607692e-48 | -8.615850e-47 |
| Msa0643890 | Msa1106700 | 0.805822 | 1.108800e-49 | -8.615850e-47 |
| Msa0643890 | Msa1116130 | -0.806536 | 7.843170e-50 | -8.615850e-47 |
| Msa0643890 | Msa1123380 | 0.803200 | 3.904282e-49 | -8.615850e-47 |
| Msa0643890 | Msa1124110 | 0.815150 | 1.071144e-51 | -8.615850e-47 |
| Msa0643890 | Msa1124960 | 0.834137 | 3.566160e-56 | -8.615850e-47 |
| Msa0643890 | Msa1131220 | 0.800975 | 1.119955e-48 | -8.615850e-47 |
| Msa0643890 | Msa1134110 | 0.828704 | 7.754515e-55 | -8.615850e-47 |
| Msa0643890 | Msa1137570 | 0.826028 | 3.396706e-54 | -8.615850e-47 |
| Msa0643890 | Msa1140210 | 0.811540 | 6.651143e-51 | -8.615850e-47 |
| Msa0643890 | Msa1147280 | 0.803519 | 3.354310e-49 | -8.615850e-47 |
| Msa0643890 | Msa1151910 | 0.809641 | 1.711756e-50 | -8.615850e-47 |
| Msa0643890 | Msa1154030 | 0.806753 | 7.056680e-50 | -8.615850e-47 |
| Msa0643890 | Msa1163650 | -0.803665 | 3.128608e-49 | -8.615850e-47 |
| Msa0643890 | Msa1167340 | 0.827651 | 1.390828e-54 | -8.615850e-47 |
| Msa0643890 | Msa1168160 | 0.811855 | 5.680321e-51 | -8.615850e-47 |
| Msa0643890 | Msa1168950 | 0.802330 | 5.903892e-49 | -8.615850e-47 |
| Msa0643890 | Msa1174040 | 0.808190 | 3.498490e-50 | -8.615850e-47 |
| Msa0643890 | Msa1183120 | 0.801526 | 8.636191e-49 | -8.615850e-47 |
| Msa0643890 | Msa1189070 | 0.817504 | 3.185903e-52 | -8.615850e-47 |
| Msa0643890 | Msa1190930 | 0.811708 | 6.115090e-51 | -8.615850e-47 |
| Msa0643890 | Msa1193290 | 0.804398 | 2.202301e-49 | -8.615850e-47 |
| Msa0643890 | Msa1199990 | 0.822395 | 2.423997e-53 | -8.615850e-47 |
| Msa0643890 | Msa1204530 | 0.805940 | 1.047053e-49 | -8.615850e-47 |
| Msa0643890 | Msa1211150 | -0.802711 | 4.927782e-49 | -8.615850e-47 |
| Msa0643890 | Msa1212940 | 0.807971 | 3.895288e-50 | -8.615850e-47 |
| Msa0643890 | Msa1214020 | 0.801209 | 1.003243e-48 | -8.615850e-47 |
| Msa0643890 | Msa1218550 | 0.801873 | 7.330707e-49 | -8.615850e-47 |
| Msa0643890 | Msa1221060 | 0.818286 | 2.121946e-52 | -8.615850e-47 |
| Msa0643890 | Msa1225700 | 0.801765 | 7.714781e-49 | -8.615850e-47 |
| Msa0643890 | Msa1244600 | 0.850130 | 2.072312e-60 | -8.615850e-47 |
| Msa0643890 | Msa1244610 | 0.818286 | 2.122345e-52 | -8.615850e-47 |
| Msa0643890 | Msa1250530 | 0.837938 | 3.867870e-57 | -8.615850e-47 |
| Msa0643890 | Msa1253020 | 0.831496 | 1.615047e-55 | -8.615850e-47 |
| Msa0643890 | Msa1254730 | 0.808223 | 3.442304e-50 | -8.615850e-47 |
| Msa0643890 | Msa1255190 | 0.807828 | 4.176466e-50 | -8.615850e-47 |
| Msa0643890 | Msa1271990 | 0.816114 | 6.534671e-52 | -8.615850e-47 |
| Msa0643890 | Msa1275360 | 0.801312 | 9.552984e-49 | -8.615850e-47 |
| Msa0643890 | Msa1279400 | 0.833663 | 4.686264e-56 | -8.615850e-47 |
| Msa0643890 | Msa1283860 | 0.811635 | 6.344817e-51 | -8.615850e-47 |
| Msa0643890 | Msa1284550 | 0.817989 | 2.476203e-52 | -8.615850e-47 |
| Msa0643890 | Msa1284680 | 0.815902 | 7.287322e-52 | -8.615850e-47 |
| Msa0643890 | Msa1286800 | 0.816178 | 6.322876e-52 | -8.615850e-47 |
| Msa0643890 | Msa1287220 | 0.812591 | 3.925836e-51 | -8.615850e-47 |
| Msa0643890 | Msa1293510 | 0.809131 | 2.202059e-50 | -8.615850e-47 |
| Msa0643890 | Msa1294820 | 0.806603 | 7.593746e-50 | -8.615850e-47 |
| Msa0643890 | Msa1303240 | 0.813641 | 2.309668e-51 | -8.615850e-47 |
| Msa0643890 | Msa1303250 | 0.818374 | 2.026924e-52 | -8.615850e-47 |
| Msa0643890 | Msa1305340 | 0.803785 | 2.954080e-49 | -8.615850e-47 |
| Msa0643890 | Msa1306840 | 0.804447 | 2.151115e-49 | -8.615850e-47 |
| Msa0643890 | Msa1327680 | 0.812970 | 3.241928e-51 | -8.615850e-47 |
| Msa0643890 | Msa1336710 | 0.819492 | 1.128806e-52 | -8.615850e-47 |
| Msa0643890 | Msa1346370 | 0.805391 | 1.365496e-49 | -8.615850e-47 |
| Msa0643890 | Msa1353470 | 0.818718 | 1.693073e-52 | -8.615850e-47 |
| Msa0643890 | Msa1353980 | 0.819449 | 1.154533e-52 | -8.615850e-47 |
| Msa0643890 | Msa1359040 | 0.800999 | 1.107056e-48 | -8.615850e-47 |
| Msa0643890 | Msa1360440 | 0.829094 | 6.237168e-55 | -8.615850e-47 |
| Msa0643890 | Msa1361400 | 0.808708 | 2.712590e-50 | -8.615850e-47 |
| Msa0643890 | Msa1361410 | 0.816778 | 4.639258e-52 | -8.615850e-47 |
| Msa0643890 | Msa1367590 | 0.808253 | 3.392046e-50 | -8.615850e-47 |
| Msa0643890 | Msa1370070 | -0.803265 | 3.785333e-49 | -8.615850e-47 |
| Msa0643890 | Msa1372760 | 0.814061 | 1.865933e-51 | -8.615850e-47 |
| Msa0643890 | Msa1374040 | 0.813968 | 1.956381e-51 | -8.615850e-47 |
| Msa0643890 | Msa1374550 | 0.821974 | 3.035743e-53 | -8.615850e-47 |
| Msa0643890 | Msa1375560 | 0.818798 | 1.623773e-52 | -8.615850e-47 |
| Msa0643890 | Msa1382540 | 0.846599 | 1.962466e-59 | -8.615850e-47 |
| Msa0643890 | Msa1411020 | 0.800161 | 1.641231e-48 | -8.615850e-47 |
| Msa0643890 | Msa1411700 | 0.815014 | 1.148159e-51 | -8.615850e-47 |
| Msa0643890 | Msa1417420 | 0.800992 | 1.110970e-48 | -8.615850e-47 |
| Msa0643890 | Msa1422580 | 0.827004 | 1.987991e-54 | -8.615850e-47 |
| Msa0643890 | Msa1429680 | 0.805991 | 1.021820e-49 | -8.615850e-47 |
| Msa0643890 | Msa1433390 | 0.816700 | 4.831188e-52 | -8.615850e-47 |
| Msa0643890 | Msa1434350 | 0.801562 | 8.490251e-49 | -8.615850e-47 |
| Msa0643890 | Msa1435270 | 0.814976 | 1.171105e-51 | -8.615850e-47 |
| Msa0643890 | Msa1436570 | 0.802789 | 4.747854e-49 | -8.615850e-47 |
| Msa0643890 | Msa1439320 | 0.802602 | 5.191077e-49 | -8.615850e-47 |
| Msa0643890 | Msa1448510 | 0.801127 | 1.042683e-48 | -8.615850e-47 |
| Msa0643890 | Msa1451160 | 0.831668 | 1.464880e-55 | -8.615850e-47 |
| Msa0643890 | Msa1451550 | 0.826854 | 2.158777e-54 | -8.615850e-47 |
| Msa0643890 | Msa1451560 | 0.817975 | 2.495316e-52 | -8.615850e-47 |
| Msa0643890 | Msa1452240 | 0.810669 | 1.027399e-50 | -8.615850e-47 |
| Msa0643890 | Msa1458610 | 0.824311 | 8.648162e-54 | -8.615850e-47 |
| Msa0643890 | Msa1460020 | 0.810176 | 1.312925e-50 | -8.615850e-47 |
| Msa0643890 | Msa1460050 | 0.823294 | 1.496352e-53 | -8.615850e-47 |
| Msa0643890 | Msa1464810 | 0.821920 | 3.123151e-53 | -8.615850e-47 |
| Msa0643890 | Msa1465300 | 0.821741 | 3.435476e-53 | -8.615850e-47 |
| Msa0643890 | Msa1466540 | 0.802716 | 4.915629e-49 | -8.615850e-47 |
| Msa0124060 | Msa0643890 | 0.811361 | 7.274560e-51 | -8.615850e-47 |
| Msa0127800 | Msa0643890 | 0.808334 | 3.259040e-50 | -8.615850e-47 |
| Msa0137840 | Msa0643890 | 0.804566 | 2.031124e-49 | -8.615850e-47 |
| Msa0140780 | Msa0643890 | 0.802542 | 5.338654e-49 | -8.615850e-47 |
| Msa0145580 | Msa0643890 | 0.828239 | 1.004002e-54 | -8.615850e-47 |
| Msa0146260 | Msa0643890 | 0.813906 | 2.018643e-51 | -8.615850e-47 |
| Msa0148100 | Msa0643890 | 0.817343 | 3.463757e-52 | -8.615850e-47 |
| Msa0157290 | Msa0643890 | 0.838980 | 2.083293e-57 | -8.615850e-47 |
| Msa0159930 | Msa0643890 | 0.815235 | 1.025492e-51 | -8.615850e-47 |
| Msa0168500 | Msa0643890 | 0.823573 | 1.287964e-53 | -8.615850e-47 |
| Msa0171290 | Msa0643890 | 0.803022 | 4.250046e-49 | -8.615850e-47 |
| Msa0182620 | Msa0643890 | -0.802421 | 5.654362e-49 | -8.615850e-47 |
| Msa0184040 | Msa0643890 | 0.813192 | 2.898228e-51 | -8.615850e-47 |
| Msa0194950 | Msa0643890 | -0.807326 | 5.339335e-50 | -8.615850e-47 |
| Msa0195630 | Msa0643890 | 0.825951 | 3.542501e-54 | -8.615850e-47 |
| Msa0196690 | Msa0643890 | 0.801476 | 8.845717e-49 | -8.615850e-47 |
| Msa0197420 | Msa0643890 | 0.807704 | 4.438618e-50 | -8.615850e-47 |
| Msa0205510 | Msa0643890 | 0.820540 | 6.499101e-53 | -8.615850e-47 |
| Msa0211150 | Msa0643890 | 0.833084 | 6.532312e-56 | -8.615850e-47 |
| Msa0212990 | Msa0643890 | 0.803768 | 2.977927e-49 | -8.615850e-47 |
| Msa0218780 | Msa0643890 | 0.802954 | 4.389877e-49 | -8.615850e-47 |
| Msa0237410 | Msa0643890 | 0.814997 | 1.158364e-51 | -8.615850e-47 |
| Msa0376350 | Msa0643890 | 0.815738 | 7.927812e-52 | -8.615850e-47 |
| Msa0379640 | Msa0643890 | 0.803555 | 3.296716e-49 | -8.615850e-47 |
| Msa0380300 | Msa0643890 | 0.802401 | 5.708673e-49 | -8.615850e-47 |
| Msa0389340 | Msa0643890 | 0.803698 | 3.079109e-49 | -8.615850e-47 |
| Msa0391690 | Msa0643890 | 0.826269 | 2.975793e-54 | -8.615850e-47 |
| Msa0405570 | Msa0643890 | 0.834133 | 3.574921e-56 | -8.615850e-47 |
| Msa0410650 | Msa0643890 | 0.820823 | 5.594282e-53 | -8.615850e-47 |
| Msa0422850 | Msa0643890 | 0.803240 | 3.831058e-49 | -8.615850e-47 |
| Msa0422930 | Msa0643890 | 0.806240 | 9.054965e-50 | -8.615850e-47 |
| Msa0423520 | Msa0643890 | 0.811757 | 5.968456e-51 | -8.615850e-47 |
| Msa0424790 | Msa0643890 | 0.803243 | 3.826461e-49 | -8.615850e-47 |
| Msa0436050 | Msa0643890 | 0.804083 | 2.561404e-49 | -8.615850e-47 |
| Msa0440750 | Msa0643890 | 0.830252 | 3.261045e-55 | -8.615850e-47 |
| Msa0450720 | Msa0643890 | 0.802463 | 5.542786e-49 | -8.615850e-47 |
| Msa0453350 | Msa0643890 | 0.813022 | 3.158140e-51 | -8.615850e-47 |
| Msa0455040 | Msa0643890 | 0.801268 | 9.756153e-49 | -8.615850e-47 |
| Msa0461720 | Msa0643890 | 0.812316 | 4.506725e-51 | -8.615850e-47 |
| Msa0468330 | Msa0643890 | 0.809147 | 2.184619e-50 | -8.615850e-47 |
| Msa0469030 | Msa0643890 | 0.810162 | 1.321963e-50 | -8.615850e-47 |
| Msa0469990 | Msa0643890 | 0.810350 | 1.204354e-50 | -8.615850e-47 |
| Msa0479170 | Msa0643890 | 0.830050 | 3.652484e-55 | -8.615850e-47 |
| Msa0479970 | Msa0643890 | 0.802691 | 4.975193e-49 | -8.615850e-47 |
| Msa0481530 | Msa0643890 | 0.800431 | 1.445614e-48 | -8.615850e-47 |
| Msa0243100 | Msa0643890 | 0.807554 | 4.776933e-50 | -8.615850e-47 |
| Msa0259500 | Msa0643890 | 0.822614 | 2.156243e-53 | -8.615850e-47 |
| Msa0264150 | Msa0643890 | 0.810964 | 8.871768e-51 | -8.615850e-47 |
| Msa0266500 | Msa0643890 | 0.815451 | 9.184777e-52 | -8.615850e-47 |
| Msa0273900 | Msa0643890 | 0.812370 | 4.387286e-51 | -8.615850e-47 |
| Msa0287410 | Msa0643890 | 0.805607 | 1.229964e-49 | -8.615850e-47 |
| Msa0287650 | Msa0643890 | 0.832405 | 9.633429e-56 | -8.615850e-47 |
| Msa0300690 | Msa0643890 | 0.803107 | 4.082019e-49 | -8.615850e-47 |
| Msa0305700 | Msa0643890 | 0.812840 | 3.462365e-51 | -8.615850e-47 |
| Msa0311700 | Msa0643890 | 0.817175 | 3.779595e-52 | -8.615850e-47 |
| Msa0314720 | Msa0643890 | 0.807774 | 4.288651e-50 | -8.615850e-47 |
| Msa0316810 | Msa0643890 | 0.820044 | 8.444052e-53 | -8.615850e-47 |
| Msa0317340 | Msa0643890 | 0.802469 | 5.527179e-49 | -8.615850e-47 |
| Msa0334040 | Msa0643890 | 0.802328 | 5.910748e-49 | -8.615850e-47 |
| Msa0339500 | Msa0643890 | 0.809003 | 2.344838e-50 | -8.615850e-47 |
| Msa0341050 | Msa0643890 | 0.806459 | 8.142542e-50 | -8.615850e-47 |
| Msa0341540 | Msa0643890 | 0.823939 | 1.056974e-53 | -8.615850e-47 |
| Msa0342310 | Msa0643890 | 0.810329 | 1.216605e-50 | -8.615850e-47 |
| Msa0343850 | Msa0643890 | 0.817932 | 2.551296e-52 | -8.615850e-47 |
| Msa0345970 | Msa0643890 | 0.811366 | 7.257191e-51 | -8.615850e-47 |
| Msa0346430 | Msa0643890 | 0.825925 | 3.592153e-54 | -8.615850e-47 |
| Msa0357340 | Msa0643890 | 0.800122 | 1.671075e-48 | -8.615850e-47 |
| Msa0487420 | Msa0643890 | 0.802888 | 4.530146e-49 | -8.615850e-47 |
| Msa0487630 | Msa0643890 | 0.803354 | 3.629326e-49 | -8.615850e-47 |
| Msa0489790 | Msa0643890 | 0.803341 | 3.651079e-49 | -8.615850e-47 |
| Msa0498060 | Msa0643890 | 0.819934 | 8.949054e-53 | -8.615850e-47 |
| Msa0502880 | Msa0643890 | 0.812691 | 3.732471e-51 | -8.615850e-47 |
| Msa0507680 | Msa0643890 | 0.827000 | 1.992132e-54 | -8.615850e-47 |
| Msa0509610 | Msa0643890 | 0.805958 | 1.038153e-49 | -8.615850e-47 |
| Msa0516170 | Msa0643890 | 0.806154 | 9.438902e-50 | -8.615850e-47 |
| Msa0523460 | Msa0643890 | 0.829756 | 4.308800e-55 | -8.615850e-47 |
| Msa0524500 | Msa0643890 | 0.836190 | 1.081998e-56 | -8.615850e-47 |
| Msa0542520 | Msa0643890 | 0.816337 | 5.825572e-52 | -8.615850e-47 |
| Msa0546540 | Msa0643890 | 0.807306 | 5.390138e-50 | -8.615850e-47 |
| Msa0547160 | Msa0643890 | 0.805129 | 1.549212e-49 | -8.615850e-47 |
| Msa0547890 | Msa0643890 | 0.919371 | 4.893923e-87 | -8.615850e-47 |
| Msa0556060 | Msa0643890 | 0.807027 | 6.175953e-50 | -8.615850e-47 |
| Msa0574890 | Msa0643890 | 0.814285 | 1.665261e-51 | -8.615850e-47 |
| Msa0577500 | Msa0643890 | 0.805226 | 1.478817e-49 | -8.615850e-47 |
| Msa0594660 | Msa0643890 | 0.819196 | 1.318772e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643890 | MtrunA17_Chr4g0030781 | 98.315 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 0.0 | 712 |
| Msa0643890 | MtrunA17_Chr4g0030791 | 98.315 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 0.0 | 712 |
| Msa0643890 | MtrunA17_Chr4g0036721 | 98.315 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 0.0 | 712 |
| Msa0643890 | MtrunA17_Chr4g0014171 | 98.034 | 356 | 7 | 0 | 1 | 356 | 1 | 356 | 0.0 | 708 |
| Msa0643890 | MtrunA17_Chr5g0405881 | 84.038 | 213 | 7 | 1 | 144 | 356 | 71 | 256 | 1.87e-123 | 355 |
| Msa0643890 | MtrunA17_Chr8g0380731 | 41.457 | 357 | 206 | 3 | 1 | 354 | 1 | 357 | 3.00e-101 | 303 |
| Msa0643890 | MtrunA17_Chr8g0380741 | 40.517 | 348 | 205 | 2 | 1 | 346 | 1 | 348 | 1.35e-95 | 288 |
| Msa0643890 | MtrunA17_Chr8g0380751 | 39.867 | 301 | 179 | 2 | 29 | 327 | 1 | 301 | 1.24e-82 | 254 |
| Msa0643890 | MtrunA17_Chr7g0227371 | 91.667 | 36 | 3 | 0 | 31 | 66 | 1 | 36 | 6.11e-15 | 69.7 |
| Msa0643890 | MtrunA17_Chr7g0261321 | 28.750 | 160 | 111 | 2 | 196 | 353 | 365 | 523 | 1.34e-13 | 72.0 |
| Msa0643890 | MtrunA17_Chr7g0261321 | 25.389 | 193 | 102 | 5 | 30 | 180 | 61 | 253 | 1.77e-11 | 65.5 |
| Msa0643890 | MtrunA17_Chr2g0326201 | 32.374 | 139 | 86 | 5 | 200 | 333 | 87 | 222 | 4.57e-12 | 65.5 |
| Msa0643890 | MtrunA17_Chr2g0326061 | 27.778 | 180 | 119 | 7 | 181 | 355 | 295 | 468 | 1.10e-11 | 65.9 |
| Msa0643890 | MtrunA17_Chr2g0326171 | 29.012 | 162 | 104 | 7 | 200 | 355 | 295 | 451 | 1.80e-11 | 65.1 |
| Msa0643890 | MtrunA17_Chr2g0326191 | 32.143 | 140 | 87 | 5 | 200 | 334 | 310 | 446 | 2.00e-11 | 65.1 |
| Msa0643890 | MtrunA17_Chr1g0185811 | 28.671 | 143 | 95 | 4 | 196 | 335 | 422 | 560 | 2.47e-11 | 65.1 |
| Msa0643890 | MtrunA17_Chr2g0326071 | 28.395 | 162 | 105 | 7 | 200 | 355 | 295 | 451 | 4.26e-11 | 63.9 |
| Msa0643890 | MtrunA17_Chr1g0185821 | 28.671 | 143 | 95 | 4 | 196 | 335 | 391 | 529 | 5.98e-11 | 63.5 |
| Msa0643890 | MtrunA17_Chr4g0029921 | 32.743 | 113 | 73 | 3 | 223 | 333 | 307 | 418 | 6.23e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643890 | AT1G07750.1 | 80.056 | 356 | 71 | 0 | 1 | 356 | 1 | 356 | 0.0 | 595 |
| Msa0643890 | AT2G28680.1 | 79.494 | 356 | 73 | 0 | 1 | 356 | 1 | 356 | 0.0 | 590 |
| Msa0643890 | AT1G03890.1 | 24.694 | 409 | 244 | 11 | 5 | 354 | 44 | 447 | 1.05e-31 | 124 |
| Msa0643890 | AT1G03880.1 | 23.214 | 392 | 235 | 9 | 12 | 339 | 42 | 431 | 6.50e-28 | 114 |
| Msa0643890 | AT5G44120.3 | 22.475 | 396 | 234 | 8 | 12 | 336 | 48 | 441 | 3.99e-24 | 103 |
| Msa0643890 | AT5G44120.2 | 23.780 | 328 | 203 | 7 | 54 | 336 | 12 | 337 | 1.46e-20 | 92.0 |
| Msa0643890 | AT4G28520.1 | 25.581 | 301 | 181 | 7 | 78 | 336 | 193 | 492 | 1.87e-18 | 87.0 |
| Msa0643890 | AT4G28520.3 | 30.714 | 140 | 96 | 1 | 197 | 336 | 283 | 421 | 1.64e-15 | 77.8 |
| Msa0643890 | AT2G28490.1 | 23.514 | 370 | 213 | 12 | 51 | 355 | 131 | 495 | 1.34e-14 | 75.1 |
| Msa0643890 | AT5G44120.1 | 24.123 | 228 | 145 | 4 | 136 | 336 | 28 | 254 | 8.51e-14 | 71.2 |
Find 115 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCCATTCTACTTTAATT+TGG | 0.176642 | 4_3:+47321506 | None:intergenic |
| CCTTTCTTGTGTTCCTCTTT+AGG | 0.185981 | 4_3:+47322406 | None:intergenic |
| AGAAAAGGTTGTTGCAATTA+AGG | 0.194128 | 4_3:-47322710 | Msa0643890:CDS |
| CTCTTGTGATTCTGCTTTGC+AGG | 0.207745 | 4_3:-47322224 | Msa0643890:CDS |
| AAGCCAGACTTATACTTAAA+AGG | 0.221397 | 4_3:+47321209 | None:intergenic |
| CGGAAAAGCTTCTCAACTTC+TGG | 0.246295 | 4_3:+47321566 | None:intergenic |
| GGTCCTAATGGAATCTTTAC+TGG | 0.258702 | 4_3:-47322550 | Msa0643890:CDS |
| TGCAGGTTACTTACATTGTT+AGG | 0.269206 | 4_3:-47322207 | Msa0643890:CDS |
| CTTCCTTTGGTTGGTGAGGT+TGG | 0.336501 | 4_3:-47322301 | Msa0643890:CDS |
| AGGCATGGCTTTGAACTGTT+TGG | 0.348039 | 4_3:-47322386 | Msa0643890:CDS |
| TTGGTTGGTGAGGTTGGTTT+AGG | 0.350208 | 4_3:-47322295 | Msa0643890:CDS |
| ATTTGGAGGAGGGAAGAAAA+TGG | 0.351352 | 4_3:+47321523 | None:intergenic |
| TAGGGGAAGTGGCCGTGTTC+AGG | 0.353324 | 4_3:-47322188 | Msa0643890:CDS |
| GTTCAGGTTGTTGGTGTTGA+TGG | 0.356237 | 4_3:-47322172 | Msa0643890:CDS |
| TGTGGGAAGGGCTTGGGACT+TGG | 0.357118 | 4_3:-47322512 | Msa0643890:CDS |
| GGAAGATCCATGTGCTCTCC+TGG | 0.372229 | 4_3:-47322250 | Msa0643890:CDS |
| CTGAGTTTGTGGGAAGGGCT+TGG | 0.373540 | 4_3:-47322519 | Msa0643890:CDS |
| TGAGTTTGTGGGAAGGGCTT+GGG | 0.376069 | 4_3:-47322518 | Msa0643890:CDS |
| CGTAATTAGTGAATGAGTAT+TGG | 0.384383 | 4_3:-47324049 | Msa0643890:five_prime_UTR |
| GAGGTACTCTGATTCTTCTA+AGG | 0.392927 | 4_3:-47323636 | Msa0643890:CDS |
| GCAGGTTACTTACATTGTTA+GGG | 0.404646 | 4_3:-47322206 | Msa0643890:CDS |
| GCTGATCTTGTGAGGATTGA+TGG | 0.405011 | 4_3:-47322271 | Msa0643890:CDS |
| GTGTGTATTTATAAGTGTAT+TGG | 0.406983 | 4_3:+47323921 | None:intergenic |
| AAGGAATTGATTGCCTCAAT+TGG | 0.408989 | 4_3:-47321375 | Msa0643890:three_prime_UTR |
| AAGGTTGCTTATGTTCTTCA+AGG | 0.410175 | 4_3:-47323617 | Msa0643890:intron |
| AACAATGTGAAGACACTTGT+TGG | 0.410461 | 4_3:-47322484 | Msa0643890:CDS |
| GATGCTTTAGCACTCCCCTT+TGG | 0.411635 | 4_3:-47322682 | Msa0643890:CDS |
| ACCAACCAAAGGAAGGTTCT+TGG | 0.412307 | 4_3:+47322309 | None:intergenic |
| AAAGGGATTGTGAAGCTTGA+TGG | 0.412975 | 4_3:-47322448 | Msa0643890:CDS |
| GAACACCAAGAACCTTCCTT+TGG | 0.413394 | 4_3:-47322314 | Msa0643890:CDS |
| TCCATTCTACTTTAATTTGG+AGG | 0.417794 | 4_3:+47321509 | None:intergenic |
| CATGCAAGAATTGTATCTAA+TGG | 0.418961 | 4_3:+47321278 | None:intergenic |
| AGTGGCCGTGTTCAGGTTGT+TGG | 0.428776 | 4_3:-47322181 | Msa0643890:CDS |
| ATCAAGCTTCACAATCCCTT+TGG | 0.429226 | 4_3:+47322450 | None:intergenic |
| TTGTGTTCCTCTTTAGGCTC+AGG | 0.430393 | 4_3:+47322412 | None:intergenic |
| AATCCAGTAAAGATTCCATT+AGG | 0.431957 | 4_3:+47322547 | None:intergenic |
| AAGTTAGCTCTTCTGAAGAA+TGG | 0.432091 | 4_3:-47323671 | Msa0643890:CDS |
| ACTTACATTGTTAGGGGAAG+TGG | 0.437332 | 4_3:-47322199 | Msa0643890:CDS |
| ACACATGGCTGGAAGTTCTT+CGG | 0.454286 | 4_3:-47321639 | Msa0643890:CDS |
| TACACTTTCTTCGCCGATTG+AGG | 0.457933 | 4_3:+47323773 | None:intergenic |
| CATGGCTTTGAACTGTTTGG+AGG | 0.461927 | 4_3:-47322383 | Msa0643890:CDS |
| ACCAAGAACCTTCCTTTGGT+TGG | 0.462283 | 4_3:-47322310 | Msa0643890:CDS |
| TCCTCCAAATTAAAGTAGAA+TGG | 0.462317 | 4_3:-47321510 | Msa0643890:exon |
| CACCATGTCACAACACCAAA+GGG | 0.465835 | 4_3:+47322667 | None:intergenic |
| TCCCCTTTGGTGTTGTGACA+TGG | 0.472969 | 4_3:-47322669 | Msa0643890:CDS |
| GAGTTGGTTGTTCTGTTCCT+CGG | 0.474191 | 4_3:-47322625 | Msa0643890:CDS |
| AGTCTTGGAGACCACTTTGA+AGG | 0.476765 | 4_3:-47322143 | Msa0643890:CDS |
| TTGGAGACCACTTTGAAGGC+TGG | 0.478375 | 4_3:-47322139 | Msa0643890:CDS |
| TTCAACTGAGTTTGTGGGAA+GGG | 0.479133 | 4_3:-47322524 | Msa0643890:CDS |
| AAGCTTCACAATCCCTTTGG+CGG | 0.479301 | 4_3:+47322453 | None:intergenic |
| GATACAGGAAGTGGAGTTGC+TGG | 0.481664 | 4_3:-47322754 | Msa0643890:intron |
| GAACCTTCCTTTGGTTGGTG+AGG | 0.484774 | 4_3:-47322305 | Msa0643890:CDS |
| GAACTGTTTGGAGGCACCAT+TGG | 0.492260 | 4_3:-47322374 | Msa0643890:CDS |
| TATCGATCTTTCACCTCAAT+CGG | 0.492479 | 4_3:-47323786 | Msa0643890:CDS |
| GCTACCTGAATCAGAAGAAA+AGG | 0.493511 | 4_3:-47322725 | Msa0643890:CDS |
| TCGAAGATTGCTGACAATGA+TGG | 0.499253 | 4_3:-47322082 | Msa0643890:CDS |
| TCAAAGACAGATCAAAATAG+AGG | 0.499442 | 4_3:+47321339 | None:intergenic |
| GTATGTAGATAGTGTTGAAA+AGG | 0.503694 | 4_3:+47323979 | None:intergenic |
| ATTCTACTTTAATTTGGAGG+AGG | 0.504281 | 4_3:+47321512 | None:intergenic |
| TGGAAGTTCTTCGGTGTGGA+AGG | 0.510879 | 4_3:-47321630 | Msa0643890:CDS |
| CAGCCTTCCTGAGCCTAAAG+AGG | 0.511945 | 4_3:-47322419 | Msa0643890:CDS |
| CCAGCCATGTGTGTAAATAC+AGG | 0.517118 | 4_3:+47321650 | None:intergenic |
| CAATCGGCGAAGAAAGTGTA+TGG | 0.529298 | 4_3:-47323770 | Msa0643890:CDS |
| AAAGTGTATGGTGGTGATGG+TGG | 0.533752 | 4_3:-47323758 | Msa0643890:CDS |
| TTGGATGTTGATATTAAGAA+TGG | 0.538544 | 4_3:-47322355 | Msa0643890:CDS |
| GCTATCACCTACAGTTCTGC+AGG | 0.538663 | 4_3:-47321606 | Msa0643890:CDS |
| TTGGAAAGCAATCCGCCAAA+GGG | 0.540566 | 4_3:-47322465 | Msa0643890:CDS |
| AGATTCCATTAGGACCAGTC+AGG | 0.543055 | 4_3:+47322557 | None:intergenic |
| CCTAAAGAGGAACACAAGAA+AGG | 0.543963 | 4_3:-47322406 | Msa0643890:CDS |
| AAAGGTTGTTGCAATTAAGG+AGG | 0.546053 | 4_3:-47322707 | Msa0643890:CDS |
| TTCTACTTTAATTTGGAGGA+GGG | 0.549544 | 4_3:+47321513 | None:intergenic |
| CCTGTATTTACACACATGGC+TGG | 0.553443 | 4_3:-47321650 | Msa0643890:CDS |
| GTTTAGGAGCTGATCTTGTG+AGG | 0.556251 | 4_3:-47322279 | Msa0643890:CDS |
| TTGATATTAAGAATGGTGGA+AGG | 0.557402 | 4_3:-47322348 | Msa0643890:CDS |
| CAGTCCTGTATTTACACACA+TGG | 0.558298 | 4_3:-47321654 | Msa0643890:CDS |
| GTTCCTCTTTAGGCTCAGGA+AGG | 0.561301 | 4_3:+47322416 | None:intergenic |
| ATGTTACCTTGACGCAACAT+AGG | 0.563061 | 4_3:+47323704 | None:intergenic |
| TATGTAGATAGTGTTGAAAA+GGG | 0.564071 | 4_3:+47323980 | None:intergenic |
| TGTTGATGGTAAGAGAGTCT+TGG | 0.566059 | 4_3:-47322158 | Msa0643890:CDS |
| GCAGAATCACAAGAGAATCC+AGG | 0.572154 | 4_3:+47322232 | None:intergenic |
| TAAGCCCCTAAAACCAATTG+AGG | 0.572854 | 4_3:+47321362 | None:intergenic |
| AGAGAATCCAGGAGAGCACA+TGG | 0.578294 | 4_3:+47322243 | None:intergenic |
| ACTTCAAAAGCACACAAGGC+TGG | 0.580061 | 4_3:-47322598 | Msa0643890:CDS |
| GATGTTGATATTAAGAATGG+TGG | 0.582311 | 4_3:-47322352 | Msa0643890:CDS |
| CGCAACATAGGAAGCTCAGA+AGG | 0.585364 | 4_3:+47323716 | None:intergenic |
| CATCAGCAGTCCTCTTTGAA+CGG | 0.585723 | 4_3:+47321546 | None:intergenic |
| AAGGTTGTTGCAATTAAGGA+GGG | 0.587151 | 4_3:-47322706 | Msa0643890:CDS |
| TTCTTAATATCAACATCCAA+TGG | 0.592422 | 4_3:+47322358 | None:intergenic |
| GTTGGAAAGCAATCCGCCAA+AGG | 0.593219 | 4_3:-47322466 | Msa0643890:CDS |
| AAAGCAGCCTGCAGAACTGT+AGG | 0.593333 | 4_3:+47321599 | None:intergenic |
| CGATACTTCAAAAGCACACA+AGG | 0.594218 | 4_3:-47322602 | Msa0643890:CDS |
| ATGGTGGATCGTACTATGCT+TGG | 0.594357 | 4_3:-47323742 | Msa0643890:CDS |
| GATTGCTGACAATGATGGAA+TGG | 0.599379 | 4_3:-47322077 | Msa0643890:CDS |
| AAGAAAGTGTATGGTGGTGA+TGG | 0.607053 | 4_3:-47323761 | Msa0643890:CDS |
| CCACCATGTCACAACACCAA+AGG | 0.611673 | 4_3:+47322666 | None:intergenic |
| CAACAAAGAGGACACTGAGT+TGG | 0.612479 | 4_3:-47322641 | Msa0643890:CDS |
| CAACCTCACCAACCAAAGGA+AGG | 0.617830 | 4_3:+47322302 | None:intergenic |
| TTTCAACTGAGTTTGTGGGA+AGG | 0.619355 | 4_3:-47322525 | Msa0643890:CDS |
| CAGGTTACTTACATTGTTAG+GGG | 0.620675 | 4_3:-47322205 | Msa0643890:CDS |
| CAACACCAACAACCTGAACA+CGG | 0.621513 | 4_3:+47322176 | None:intergenic |
| CAAATCTCCAGCCTTCAAAG+TGG | 0.631181 | 4_3:+47322132 | None:intergenic |
| AGAGGAACACAAGAAAGGCA+TGG | 0.634599 | 4_3:-47322401 | Msa0643890:CDS |
| AAACCAACCTCACCAACCAA+AGG | 0.641668 | 4_3:+47322298 | None:intergenic |
| TGGCTGGAAGTTCTTCGGTG+TGG | 0.642740 | 4_3:-47321634 | Msa0643890:CDS |
| GAGCTTCCTATGTTGCGTCA+AGG | 0.643057 | 4_3:-47323710 | Msa0643890:CDS |
| GAGATTTGTTCATTGTACCG+AGG | 0.645213 | 4_3:-47322117 | Msa0643890:CDS |
| CCTTTGGTGTTGTGACATGG+TGG | 0.659432 | 4_3:-47322666 | Msa0643890:CDS |
| TGATATTAAGAATGGTGGAA+GGG | 0.666660 | 4_3:-47322347 | Msa0643890:CDS |
| ATGTTGCGTCAAGGTAACAT+TGG | 0.668475 | 4_3:-47323701 | Msa0643890:CDS |
| GACATGGTGGTACAACAAAG+AGG | 0.672878 | 4_3:-47322653 | Msa0643890:CDS |
| TTAGAAGAATCAGAGTACCT+CGG | 0.684154 | 4_3:+47323638 | None:intergenic |
| TCGGCGAAGAAAGTGTATGG+TGG | 0.717314 | 4_3:-47323767 | Msa0643890:CDS |
| ACCATGTCACAACACCAAAG+GGG | 0.723908 | 4_3:+47322668 | None:intergenic |
| ATGATAACGAGTATTAGCAG+CGG | 0.734156 | 4_3:-47324026 | Msa0643890:five_prime_UTR |
| CTGACAATGATGGAATGGAG+TGG | 0.742748 | 4_3:-47322072 | Msa0643890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTCAAAAAAGTTGAAA+CGG | - | chr4_3:47321991-47322010 | Msa0643890:intron | 15.0% |
| !! | AGAAAAAAAATCACTAAAAT+CGG | - | chr4_3:47322031-47322050 | Msa0643890:intron | 15.0% |
| !!! | TTTTTAACATTTGTATCAAA+CGG | - | chr4_3:47322123-47322142 | Msa0643890:CDS | 15.0% |
| !!! | ATAAAGTTATTTTAACTGTA+TGG | + | chr4_3:47322280-47322299 | None:intergenic | 15.0% |
| !!! | AACTTTATTTTTATACATCA+TGG | - | chr4_3:47322292-47322311 | Msa0643890:CDS | 15.0% |
| !! | TACTACTATAATATCAATAT+TGG | + | chr4_3:47322404-47322423 | None:intergenic | 15.0% |
| !! | TGTAATCAAATATATTTACT+AGG | - | chr4_3:47323459-47323478 | Msa0643890:intron | 15.0% |
| !!! | ACTTTTATTTTGGATTTATA+AGG | - | chr4_3:47323856-47323875 | Msa0643890:five_prime_UTR | 15.0% |
| !! | AAGAAAAATAACTATATCTA+AGG | + | chr4_3:47323951-47323970 | None:intergenic | 15.0% |
| !! | AAACGAAAAAACAAATGAAA+GGG | + | chr4_3:47321405-47321424 | None:intergenic | 20.0% |
| !!! | GTTTTATTTGTCATTATGTT+TGG | - | chr4_3:47321879-47321898 | Msa0643890:intron | 20.0% |
| !! | TATGTTTGGATGATTATAAA+AGG | - | chr4_3:47321893-47321912 | Msa0643890:intron | 20.0% |
| !! | ATGTTTGGATGATTATAAAA+GGG | - | chr4_3:47321894-47321913 | Msa0643890:intron | 20.0% |
| !! | TTTGTTAGGGATTATAAAAA+AGG | - | chr4_3:47321921-47321940 | Msa0643890:intron | 20.0% |
| !!! | GATTTTAGTGATTTTTTTTC+TGG | + | chr4_3:47322032-47322051 | None:intergenic | 20.0% |
| !! | TTCTATTATACCATCAATAT+TGG | + | chr4_3:47322445-47322464 | None:intergenic | 20.0% |
| !! | AACAAATATCAAACAACAAA+AGG | + | chr4_3:47323270-47323289 | None:intergenic | 20.0% |
| !! | TTTCAAAGAAACACAAATTT+GGG | + | chr4_3:47323388-47323407 | None:intergenic | 20.0% |
| !! | ATTTCAAAGAAACACAAATT+TGG | + | chr4_3:47323389-47323408 | None:intergenic | 20.0% |
| !! | ATCAAATATATTTACTAGGA+AGG | - | chr4_3:47323463-47323482 | Msa0643890:intron | 20.0% |
| !! | ATTTCCATTCTACTTTAATT+TGG | + | chr4_3:47323747-47323766 | None:intergenic | 20.0% |
| !!! | AAGTTTTTTTAGTTTTGTCA+TGG | - | chr4_3:47323767-47323786 | Msa0643890:CDS | 20.0% |
| !! | TATGTAGATAGTGTTGAAAA+GGG | + | chr4_3:47321273-47321292 | None:intergenic | 25.0% |
| ! | GTGTGTATTTATAAGTGTAT+TGG | + | chr4_3:47321332-47321351 | None:intergenic | 25.0% |
| ! | CAAACGAAAAAACAAATGAA+AGG | + | chr4_3:47321406-47321425 | None:intergenic | 25.0% |
| !! | ACTTTTTATGAATGAAGTGT+TGG | + | chr4_3:47321861-47321880 | None:intergenic | 25.0% |
| !!! | TATAAAAGGGTTAGTTTGTT+AGG | - | chr4_3:47321907-47321926 | Msa0643890:intron | 25.0% |
| !!! | ATAAAAGGGTTAGTTTGTTA+GGG | - | chr4_3:47321908-47321927 | Msa0643890:intron | 25.0% |
| !! | AAAAAGATGAATTTCTGAGA+AGG | - | chr4_3:47322056-47322075 | Msa0643890:CDS | 25.0% |
| ! | TCACAAAAGCAGTATAAAAT+AGG | + | chr4_3:47322378-47322397 | None:intergenic | 25.0% |
| ! | TTTGTGATTACCAATATTGA+TGG | - | chr4_3:47322391-47322410 | Msa0643890:CDS | 25.0% |
| ! | TTCTTAATATCAACATCCAA+TGG | + | chr4_3:47322895-47322914 | None:intergenic | 25.0% |
| ! | TTGGATGTTGATATTAAGAA+TGG | - | chr4_3:47322895-47322914 | Msa0643890:intron | 25.0% |
| ! | AGTTAAGAAAAACTCACTTA+GGG | + | chr4_3:47323221-47323240 | None:intergenic | 25.0% |
| ! | AAGTTAAGAAAAACTCACTT+AGG | + | chr4_3:47323222-47323241 | None:intergenic | 25.0% |
| !! | ATGACTGATAACATAGATTT+TGG | - | chr4_3:47323306-47323325 | Msa0643890:intron | 25.0% |
| !! | TCTAGTGTATACATAGATTT+TGG | - | chr4_3:47323350-47323369 | Msa0643890:intron | 25.0% |
| ! | CAATATACCTTGATATTACA+AGG | + | chr4_3:47323513-47323532 | None:intergenic | 25.0% |
| ! | ATACTTATGATTTCTTACTG+TGG | - | chr4_3:47323559-47323578 | Msa0643890:intron | 25.0% |
| !!! | AAGTTTCTGCACTTTTATTT+TGG | - | chr4_3:47323846-47323865 | Msa0643890:five_prime_UTR | 25.0% |
| !!! | TTTCCTTTTAAGTATAAGTC+TGG | - | chr4_3:47324038-47324057 | Msa0643890:five_prime_UTR | 25.0% |
| CGTAATTAGTGAATGAGTAT+TGG | - | chr4_3:47321201-47321220 | Msa0643890:three_prime_UTR | 30.0% | |
| ! | GTATGTAGATAGTGTTGAAA+AGG | + | chr4_3:47321274-47321293 | None:intergenic | 30.0% |
| ! | TTTTATGTTGATCCCTCAAT+TGG | - | chr4_3:47321743-47321762 | Msa0643890:intron | 30.0% |
| TTTATGTTGATCCCTCAATT+GGG | - | chr4_3:47321744-47321763 | Msa0643890:intron | 30.0% | |
| !!! | TTTTATGAATGAAGTGTTGG+TGG | + | chr4_3:47321858-47321877 | None:intergenic | 30.0% |
| TAACATTTGTATCAAACGGA+TGG | - | chr4_3:47322127-47322146 | Msa0643890:CDS | 30.0% | |
| ATGAGAAAAGCTATACCAAA+GGG | - | chr4_3:47322202-47322221 | Msa0643890:CDS | 30.0% | |
| ! | TGGTTTCAGTTTCAACTTTT+TGG | - | chr4_3:47322312-47322331 | Msa0643890:CDS | 30.0% |
| TGTTGTGATACTTAATAGTG+AGG | - | chr4_3:47322466-47322485 | Msa0643890:CDS | 30.0% | |
| AGAAAAGGTTGTTGCAATTA+AGG | - | chr4_3:47322540-47322559 | Msa0643890:CDS | 30.0% | |
| !!! | TTTACTGATTTTTTCCTGAC+TGG | - | chr4_3:47322679-47322698 | Msa0643890:CDS | 30.0% |
| AATCCAGTAAAGATTCCATT+AGG | + | chr4_3:47322706-47322725 | None:intergenic | 30.0% | |
| GATGTTGATATTAAGAATGG+TGG | - | chr4_3:47322898-47322917 | Msa0643890:intron | 30.0% | |
| ! | TTGATATTAAGAATGGTGGA+AGG | - | chr4_3:47322902-47322921 | Msa0643890:intron | 30.0% |
| ! | TGATATTAAGAATGGTGGAA+GGG | - | chr4_3:47322903-47322922 | Msa0643890:intron | 30.0% |
| GTTAAGAAAAACTCACTTAG+GGG | + | chr4_3:47323220-47323239 | None:intergenic | 30.0% | |
| ATGTATACACTAGACAGATT+GGG | + | chr4_3:47323344-47323363 | None:intergenic | 30.0% | |
| TATGTATACACTAGACAGAT+TGG | + | chr4_3:47323345-47323364 | None:intergenic | 30.0% | |
| !! | TTCTACTTTAATTTGGAGGA+GGG | + | chr4_3:47323740-47323759 | None:intergenic | 30.0% |
| !! | ATTCTACTTTAATTTGGAGG+AGG | + | chr4_3:47323741-47323760 | None:intergenic | 30.0% |
| TCCTCCAAATTAAAGTAGAA+TGG | - | chr4_3:47323740-47323759 | Msa0643890:CDS | 30.0% | |
| !! | TCCATTCTACTTTAATTTGG+AGG | + | chr4_3:47323744-47323763 | None:intergenic | 30.0% |
| !!! | TTTTAGTTTTGTCATGGCAT+TGG | - | chr4_3:47323773-47323792 | Msa0643890:CDS | 30.0% |
| TCAAAGACAGATCAAAATAG+AGG | + | chr4_3:47323914-47323933 | None:intergenic | 30.0% | |
| CATGCAAGAATTGTATCTAA+TGG | + | chr4_3:47323975-47323994 | None:intergenic | 30.0% | |
| AAGCCAGACTTATACTTAAA+AGG | + | chr4_3:47324044-47324063 | None:intergenic | 30.0% | |
| ! | ATGATAACGAGTATTAGCAG+CGG | - | chr4_3:47321224-47321243 | Msa0643890:three_prime_UTR | 35.0% |
| !! | GATATGTTTTTCAGTGCATG+TGG | + | chr4_3:47321359-47321378 | None:intergenic | 35.0% |
| !! | TTTTTGTGTCGTTGTTGCTA+TGG | - | chr4_3:47321440-47321459 | Msa0643890:three_prime_UTR | 35.0% |
| TATCGATCTTTCACCTCAAT+CGG | - | chr4_3:47321464-47321483 | Msa0643890:three_prime_UTR | 35.0% | |
| ! | AAGTTAGCTCTTCTGAAGAA+TGG | - | chr4_3:47321579-47321598 | Msa0643890:CDS | 35.0% |
| ! | TTAGAAGAATCAGAGTACCT+CGG | + | chr4_3:47321615-47321634 | None:intergenic | 35.0% |
| AAGGTTGCTTATGTTCTTCA+AGG | - | chr4_3:47321633-47321652 | Msa0643890:CDS | 35.0% | |
| TTATGTTGATCCCTCAATTG+GGG | - | chr4_3:47321745-47321764 | Msa0643890:intron | 35.0% | |
| !! | AGTTGAAACGGTTTTGTGTT+TGG | - | chr4_3:47322003-47322022 | Msa0643890:intron | 35.0% |
| CATGAGAAAAGCTATACCAA+AGG | - | chr4_3:47322201-47322220 | Msa0643890:CDS | 35.0% | |
| !! | TAGTGAGGATTTGTTGATAC+AGG | - | chr4_3:47322481-47322500 | Msa0643890:CDS | 35.0% |
| ! | ACAACCTTTTCTTCTGATTC+AGG | + | chr4_3:47322532-47322551 | None:intergenic | 35.0% |
| AAAGGTTGTTGCAATTAAGG+AGG | - | chr4_3:47322543-47322562 | Msa0643890:CDS | 35.0% | |
| AAGGTTGTTGCAATTAAGGA+GGG | - | chr4_3:47322544-47322563 | Msa0643890:CDS | 35.0% | |
| ! | TGGATTTTCAACTGAGTTTG+TGG | - | chr4_3:47322720-47322739 | Msa0643890:CDS | 35.0% |
| ! | GGATTTTCAACTGAGTTTGT+GGG | - | chr4_3:47322721-47322740 | Msa0643890:CDS | 35.0% |
| AACAATGTGAAGACACTTGT+TGG | - | chr4_3:47322766-47322785 | Msa0643890:intron | 35.0% | |
| TGCAGGTTACTTACATTGTT+AGG | - | chr4_3:47323043-47323062 | Msa0643890:intron | 35.0% | |
| GCAGGTTACTTACATTGTTA+GGG | - | chr4_3:47323044-47323063 | Msa0643890:intron | 35.0% | |
| CAGGTTACTTACATTGTTAG+GGG | - | chr4_3:47323045-47323064 | Msa0643890:intron | 35.0% | |
| TTCGAAACAACGAAAAACCT+CGG | + | chr4_3:47323153-47323172 | None:intergenic | 35.0% | |
| AGCTCTTATGTTATGTTGAG+AGG | + | chr4_3:47323419-47323438 | None:intergenic | 35.0% | |
| AAGGAATTGATTGCCTCAAT+TGG | - | chr4_3:47323875-47323894 | Msa0643890:five_prime_UTR | 35.0% | |
| !!! | TGATTGCCTCAATTGGTTTT+AGG | - | chr4_3:47323882-47323901 | Msa0643890:five_prime_UTR | 35.0% |
| !!! | GATTGCCTCAATTGGTTTTA+GGG | - | chr4_3:47323883-47323902 | Msa0643890:five_prime_UTR | 35.0% |
| !!! | ATTGCCTCAATTGGTTTTAG+GGG | - | chr4_3:47323884-47323903 | Msa0643890:five_prime_UTR | 35.0% |
| !! | GTTTTTCAGTGCATGTGGTT+AGG | + | chr4_3:47321354-47321373 | None:intergenic | 40.0% |
| ! | AAGAAAGTGTATGGTGGTGA+TGG | - | chr4_3:47321489-47321508 | Msa0643890:three_prime_UTR | 40.0% |
| ATGTTACCTTGACGCAACAT+AGG | + | chr4_3:47321549-47321568 | None:intergenic | 40.0% | |
| ATGTTGCGTCAAGGTAACAT+TGG | - | chr4_3:47321549-47321568 | Msa0643890:CDS | 40.0% | |
| ! | GAGGTACTCTGATTCTTCTA+AGG | - | chr4_3:47321614-47321633 | Msa0643890:CDS | 40.0% |
| GCTATCATAACCCCAATTGA+GGG | + | chr4_3:47321758-47321777 | None:intergenic | 40.0% | |
| TGCTATCATAACCCCAATTG+AGG | + | chr4_3:47321759-47321778 | None:intergenic | 40.0% | |
| !! | AATCAAAAGTGTCAGTGCCA+CGG | + | chr4_3:47321815-47321834 | None:intergenic | 40.0% |
| ! | CATGCATATTTAGAGCCCTT+TGG | + | chr4_3:47322220-47322239 | None:intergenic | 40.0% |
| !! | GGATTTGTTGATACAGGAAG+TGG | - | chr4_3:47322487-47322506 | Msa0643890:CDS | 40.0% |
| GCTACCTGAATCAGAAGAAA+AGG | - | chr4_3:47322525-47322544 | Msa0643890:CDS | 40.0% | |
| ! | CGATACTTCAAAAGCACACA+AGG | - | chr4_3:47322648-47322667 | Msa0643890:CDS | 40.0% |
| !! | TTTTTCCTGACTGGTCCTAA+TGG | - | chr4_3:47322688-47322707 | Msa0643890:CDS | 40.0% |
| GGTCCTAATGGAATCTTTAC+TGG | - | chr4_3:47322700-47322719 | Msa0643890:CDS | 40.0% | |
| TTTCAACTGAGTTTGTGGGA+AGG | - | chr4_3:47322725-47322744 | Msa0643890:CDS | 40.0% | |
| TTCAACTGAGTTTGTGGGAA+GGG | - | chr4_3:47322726-47322745 | Msa0643890:CDS | 40.0% | |
| ATCAAGCTTCACAATCCCTT+TGG | + | chr4_3:47322803-47322822 | None:intergenic | 40.0% | |
| AAAGGGATTGTGAAGCTTGA+TGG | - | chr4_3:47322802-47322821 | Msa0643890:intron | 40.0% | |
| CCTTTCTTGTGTTCCTCTTT+AGG | + | chr4_3:47322847-47322866 | None:intergenic | 40.0% | |
| CCTAAAGAGGAACACAAGAA+AGG | - | chr4_3:47322844-47322863 | Msa0643890:intron | 40.0% | |
| ACTTACATTGTTAGGGGAAG+TGG | - | chr4_3:47323051-47323070 | Msa0643890:intron | 40.0% | |
| !! | TGTTGATGGTAAGAGAGTCT+TGG | - | chr4_3:47323092-47323111 | Msa0643890:intron | 40.0% |
| ! | GAGATTTGTTCATTGTACCG+AGG | - | chr4_3:47323133-47323152 | Msa0643890:intron | 40.0% |
| TCGAAGATTGCTGACAATGA+TGG | - | chr4_3:47323168-47323187 | Msa0643890:intron | 40.0% | |
| ! | GATTGCTGACAATGATGGAA+TGG | - | chr4_3:47323173-47323192 | Msa0643890:intron | 40.0% |
| CCTTGATATTACAAGGCTAG+TGG | + | chr4_3:47323506-47323525 | None:intergenic | 40.0% | |
| !! | CCACTAGCCTTGTAATATCA+AGG | - | chr4_3:47323503-47323522 | Msa0643890:intron | 40.0% |
| CAGTCCTGTATTTACACACA+TGG | - | chr4_3:47323596-47323615 | Msa0643890:intron | 40.0% | |
| ! | AGAAGCTTTTCCGTTCAAAG+AGG | - | chr4_3:47323694-47323713 | Msa0643890:CDS | 40.0% |
| ATTTGGAGGAGGGAAGAAAA+TGG | + | chr4_3:47323730-47323749 | None:intergenic | 40.0% | |
| TAAGCCCCTAAAACCAATTG+AGG | + | chr4_3:47323891-47323910 | None:intergenic | 40.0% | |
| ! | TACACTTTCTTCGCCGATTG+AGG | + | chr4_3:47321480-47321499 | None:intergenic | 45.0% |
| ! | CAATCGGCGAAGAAAGTGTA+TGG | - | chr4_3:47321480-47321499 | Msa0643890:three_prime_UTR | 45.0% |
| !! | AAAGTGTATGGTGGTGATGG+TGG | - | chr4_3:47321492-47321511 | Msa0643890:three_prime_UTR | 45.0% |
| !! | ATGGTGGATCGTACTATGCT+TGG | - | chr4_3:47321508-47321527 | Msa0643890:exon | 45.0% |
| !!! | AGAATGGTTTTGCTGTTCCG+AGG | - | chr4_3:47321595-47321614 | Msa0643890:CDS | 45.0% |
| GCCATAAATCCTATTCTCCG+TGG | - | chr4_3:47321795-47321814 | Msa0643890:intron | 45.0% | |
| GCCACGGAGAATAGGATTTA+TGG | + | chr4_3:47321799-47321818 | None:intergenic | 45.0% | |
| ACCATGTCACAACACCAAAG+GGG | + | chr4_3:47322585-47322604 | None:intergenic | 45.0% | |
| CACCATGTCACAACACCAAA+GGG | + | chr4_3:47322586-47322605 | None:intergenic | 45.0% | |
| GACATGGTGGTACAACAAAG+AGG | - | chr4_3:47322597-47322616 | Msa0643890:CDS | 45.0% | |
| CAACAAAGAGGACACTGAGT+TGG | - | chr4_3:47322609-47322628 | Msa0643890:CDS | 45.0% | |
| ! | GAGTTGGTTGTTCTGTTCCT+CGG | - | chr4_3:47322625-47322644 | Msa0643890:CDS | 45.0% |
| ! | ACTTCAAAAGCACACAAGGC+TGG | - | chr4_3:47322652-47322671 | Msa0643890:CDS | 45.0% |
| AGATTCCATTAGGACCAGTC+AGG | + | chr4_3:47322696-47322715 | None:intergenic | 45.0% | |
| TTGGAAAGCAATCCGCCAAA+GGG | - | chr4_3:47322785-47322804 | Msa0643890:intron | 45.0% | |
| AAGCTTCACAATCCCTTTGG+CGG | + | chr4_3:47322800-47322819 | None:intergenic | 45.0% | |
| TTGTGTTCCTCTTTAGGCTC+AGG | + | chr4_3:47322841-47322860 | None:intergenic | 45.0% | |
| AGAGGAACACAAGAAAGGCA+TGG | - | chr4_3:47322849-47322868 | Msa0643890:intron | 45.0% | |
| !! | AGGCATGGCTTTGAACTGTT+TGG | - | chr4_3:47322864-47322883 | Msa0643890:intron | 45.0% |
| !! | CATGGCTTTGAACTGTTTGG+AGG | - | chr4_3:47322867-47322886 | Msa0643890:intron | 45.0% |
| GAACACCAAGAACCTTCCTT+TGG | - | chr4_3:47322936-47322955 | Msa0643890:intron | 45.0% | |
| ACCAAGAACCTTCCTTTGGT+TGG | - | chr4_3:47322940-47322959 | Msa0643890:intron | 45.0% | |
| ACCAACCAAAGGAAGGTTCT+TGG | + | chr4_3:47322944-47322963 | None:intergenic | 45.0% | |
| AAACCAACCTCACCAACCAA+AGG | + | chr4_3:47322955-47322974 | None:intergenic | 45.0% | |
| !! | TTGGTTGGTGAGGTTGGTTT+AGG | - | chr4_3:47322955-47322974 | Msa0643890:intron | 45.0% |
| GTTTAGGAGCTGATCTTGTG+AGG | - | chr4_3:47322971-47322990 | Msa0643890:intron | 45.0% | |
| GCTGATCTTGTGAGGATTGA+TGG | - | chr4_3:47322979-47322998 | Msa0643890:intron | 45.0% | |
| GCAGAATCACAAGAGAATCC+AGG | + | chr4_3:47323021-47323040 | None:intergenic | 45.0% | |
| CTCTTGTGATTCTGCTTTGC+AGG | - | chr4_3:47323026-47323045 | Msa0643890:intron | 45.0% | |
| CAACACCAACAACCTGAACA+CGG | + | chr4_3:47323077-47323096 | None:intergenic | 45.0% | |
| !! | GTTCAGGTTGTTGGTGTTGA+TGG | - | chr4_3:47323078-47323097 | Msa0643890:intron | 45.0% |
| AGTCTTGGAGACCACTTTGA+AGG | - | chr4_3:47323107-47323126 | Msa0643890:intron | 45.0% | |
| CAAATCTCCAGCCTTCAAAG+TGG | + | chr4_3:47323121-47323140 | None:intergenic | 45.0% | |
| ! | CTGACAATGATGGAATGGAG+TGG | - | chr4_3:47323178-47323197 | Msa0643890:intron | 45.0% |
| CCAGCCATGTGTGTAAATAC+AGG | + | chr4_3:47323603-47323622 | None:intergenic | 45.0% | |
| CCTGTATTTACACACATGGC+TGG | - | chr4_3:47323600-47323619 | Msa0643890:intron | 45.0% | |
| ACACATGGCTGGAAGTTCTT+CGG | - | chr4_3:47323611-47323630 | Msa0643890:intron | 45.0% | |
| CGGAAAAGCTTCTCAACTTC+TGG | + | chr4_3:47323687-47323706 | None:intergenic | 45.0% | |
| CATCAGCAGTCCTCTTTGAA+CGG | + | chr4_3:47323707-47323726 | None:intergenic | 45.0% | |
| ! | TCGGCGAAGAAAGTGTATGG+TGG | - | chr4_3:47321483-47321502 | Msa0643890:three_prime_UTR | 50.0% |
| CGCAACATAGGAAGCTCAGA+AGG | + | chr4_3:47321537-47321556 | None:intergenic | 50.0% | |
| GAGCTTCCTATGTTGCGTCA+AGG | - | chr4_3:47321540-47321559 | Msa0643890:CDS | 50.0% | |
| GATACAGGAAGTGGAGTTGC+TGG | - | chr4_3:47322496-47322515 | Msa0643890:CDS | 50.0% | |
| GATGCTTTAGCACTCCCCTT+TGG | - | chr4_3:47322568-47322587 | Msa0643890:CDS | 50.0% | |
| !! | TCCCCTTTGGTGTTGTGACA+TGG | - | chr4_3:47322581-47322600 | Msa0643890:CDS | 50.0% |
| CCACCATGTCACAACACCAA+AGG | + | chr4_3:47322587-47322606 | None:intergenic | 50.0% | |
| !! | CCTTTGGTGTTGTGACATGG+TGG | - | chr4_3:47322584-47322603 | Msa0643890:CDS | 50.0% |
| !!! | GTGCTTTTGAAGTATCGCCG+AGG | + | chr4_3:47322645-47322664 | None:intergenic | 50.0% |
| TGAGTTTGTGGGAAGGGCTT+GGG | - | chr4_3:47322732-47322751 | Msa0643890:CDS | 50.0% | |
| GTTGGAAAGCAATCCGCCAA+AGG | - | chr4_3:47322784-47322803 | Msa0643890:intron | 50.0% | |
| GTTCCTCTTTAGGCTCAGGA+AGG | + | chr4_3:47322837-47322856 | None:intergenic | 50.0% | |
| !! | GAACTGTTTGGAGGCACCAT+TGG | - | chr4_3:47322876-47322895 | Msa0643890:intron | 50.0% |
| ! | GAACCTTCCTTTGGTTGGTG+AGG | - | chr4_3:47322945-47322964 | Msa0643890:intron | 50.0% |
| CAACCTCACCAACCAAAGGA+AGG | + | chr4_3:47322951-47322970 | None:intergenic | 50.0% | |
| !! | CTTCCTTTGGTTGGTGAGGT+TGG | - | chr4_3:47322949-47322968 | Msa0643890:intron | 50.0% |
| ! | AGAGAATCCAGGAGAGCACA+TGG | + | chr4_3:47323010-47323029 | None:intergenic | 50.0% |
| ! | TTGGAGACCACTTTGAAGGC+TGG | - | chr4_3:47323111-47323130 | Msa0643890:intron | 50.0% |
| ! | TGGAAGTTCTTCGGTGTGGA+AGG | - | chr4_3:47323620-47323639 | Msa0643890:CDS | 50.0% |
| GCTATCACCTACAGTTCTGC+AGG | - | chr4_3:47323644-47323663 | Msa0643890:CDS | 50.0% | |
| AAAGCAGCCTGCAGAACTGT+AGG | + | chr4_3:47323654-47323673 | None:intergenic | 50.0% | |
| GTGTCAGTGCCACGGAGAAT+AGG | + | chr4_3:47321807-47321826 | None:intergenic | 55.0% | |
| CTGAGTTTGTGGGAAGGGCT+TGG | - | chr4_3:47322731-47322750 | Msa0643890:CDS | 55.0% | |
| CAGCCTTCCTGAGCCTAAAG+AGG | - | chr4_3:47322831-47322850 | Msa0643890:intron | 55.0% | |
| GGAAGATCCATGTGCTCTCC+TGG | - | chr4_3:47323000-47323019 | Msa0643890:intron | 55.0% | |
| !! | AGTGGCCGTGTTCAGGTTGT+TGG | - | chr4_3:47323069-47323088 | Msa0643890:intron | 55.0% |
| TGGCTGGAAGTTCTTCGGTG+TGG | - | chr4_3:47323616-47323635 | Msa0643890:intron | 55.0% | |
| TGTGGGAAGGGCTTGGGACT+TGG | - | chr4_3:47322738-47322757 | Msa0643890:CDS | 60.0% | |
| TAGGGGAAGTGGCCGTGTTC+AGG | - | chr4_3:47323062-47323081 | Msa0643890:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 47321193 | 47324079 | 47321193 | ID=Msa0643890;Name=Msa0643890 |
| chr4_3 | mRNA | 47321193 | 47324079 | 47321193 | ID=Msa0643890-mRNA-1;Parent=Msa0643890;Name=Msa0643890-mRNA-1;_AED=0.03;_eAED=0.03;_QI=266|1|1|1|1|1|3|327|356 |
| chr4_3 | exon | 47321193 | 47321673 | 47321193 | ID=Msa0643890-mRNA-1:exon:11188;Parent=Msa0643890-mRNA-1 |
| chr4_3 | exon | 47322049 | 47322769 | 47322049 | ID=Msa0643890-mRNA-1:exon:11187;Parent=Msa0643890-mRNA-1 |
| chr4_3 | exon | 47323618 | 47324079 | 47323618 | ID=Msa0643890-mRNA-1:exon:11186;Parent=Msa0643890-mRNA-1 |
| chr4_3 | five_prime_UTR | 47323814 | 47324079 | 47323814 | ID=Msa0643890-mRNA-1:five_prime_utr;Parent=Msa0643890-mRNA-1 |
| chr4_3 | CDS | 47323618 | 47323813 | 47323618 | ID=Msa0643890-mRNA-1:cds;Parent=Msa0643890-mRNA-1 |
| chr4_3 | CDS | 47322049 | 47322769 | 47322049 | ID=Msa0643890-mRNA-1:cds;Parent=Msa0643890-mRNA-1 |
| chr4_3 | CDS | 47321520 | 47321673 | 47321520 | ID=Msa0643890-mRNA-1:cds;Parent=Msa0643890-mRNA-1 |
| chr4_3 | three_prime_UTR | 47321193 | 47321519 | 47321193 | ID=Msa0643890-mRNA-1:three_prime_utr;Parent=Msa0643890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
