AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1147010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1147010 MtrunA17_Chr7g0233831 95.856 555 23 0 1 555 1 555 0.0 1110
Msa1147010 MtrunA17_Chr7g0233771 83.964 555 88 1 1 555 1 554 0.0 953
Msa1147010 MtrunA17_Chr7g0233801 79.459 555 112 2 1 555 1 553 0.0 904
Msa1147010 MtrunA17_Chr1g0147051 46.332 518 241 11 69 555 96 607 2.69e-158 465
Msa1147010 MtrunA17_Chr7g0269541 45.988 511 254 7 56 551 49 552 2.22e-155 456
Msa1147010 MtrunA17_Chr3g0126771 41.525 590 284 12 10 555 25 597 2.97e-150 444
Msa1147010 MtrunA17_Chr8g0345281 45.437 526 253 11 56 555 72 589 7.37e-150 442
Msa1147010 MtrunA17_Chr2g0302021 51.351 444 196 9 122 555 92 525 3.06e-149 439
Msa1147010 MtrunA17_Chr4g0069841 49.666 449 201 7 118 555 82 516 4.42e-149 438
Msa1147010 MtrunA17_Chr4g0011771 50.549 455 191 12 110 555 84 513 1.99e-143 424
Msa1147010 MtrunA17_Chr4g0011791 49.672 457 199 13 105 555 78 509 9.05e-142 419
Msa1147010 MtrunA17_Chr4g0069861 47.758 446 210 8 122 555 83 517 9.00e-140 414
Msa1147010 MtrunA17_Chr3g0079341 50.455 440 195 10 125 555 102 527 1.61e-138 411
Msa1147010 MtrunA17_Chr8g0391291 46.405 459 225 5 113 555 86 539 5.42e-138 410
Msa1147010 MtrunA17_Chr3g0090091 49.778 450 205 11 115 555 91 528 2.31e-137 409
Msa1147010 MtrunA17_Chr8g0391311 46.187 459 226 5 113 555 88 541 2.80e-137 409
Msa1147010 MtrunA17_Chr3g0079361 50.000 440 197 10 125 555 102 527 2.12e-136 406
Msa1147010 MtrunA17_Chr3g0079351 49.773 440 198 10 125 555 102 527 2.58e-136 406
Msa1147010 MtrunA17_Chr7g0272141 46.154 455 214 7 118 555 102 542 5.28e-135 403
Msa1147010 MtrunA17_Chr4g0011751 47.661 449 198 10 121 555 64 489 1.21e-133 397
Msa1147010 MtrunA17_Chr4g0018371 47.260 438 218 6 125 555 108 539 4.37e-132 395
Msa1147010 MtrunA17_Chr1g0175661 46.089 473 206 12 122 555 96 558 1.36e-129 390
Msa1147010 MtrunA17_Chr4g0069881 41.053 475 263 6 84 555 75 535 1.46e-127 384
Msa1147010 MtrunA17_Chr7g0269531 45.957 470 214 9 122 555 100 565 7.27e-127 383
Msa1147010 MtrunA17_Chr1g0192331 42.911 529 257 15 48 555 24 528 3.98e-125 377
Msa1147010 MtrunA17_Chr8g0354901 40.577 520 287 11 48 555 72 581 4.28e-125 379
Msa1147010 MtrunA17_Chr3g0080391 39.155 521 291 10 48 555 67 574 7.79e-125 378
Msa1147010 MtrunA17_Chr7g0269511 45.182 467 220 10 122 555 101 564 7.86e-125 378
Msa1147010 MtrunA17_Chr1g0195301 43.856 472 220 11 122 555 91 555 4.54e-122 370
Msa1147010 MtrunA17_Chr1g0195321 43.856 472 220 11 122 555 91 555 4.54e-122 370
Msa1147010 MtrunA17_Chr1g0195331 44.068 472 219 11 122 555 91 555 6.34e-122 370
Msa1147010 MtrunA17_Chr8g0345211 41.538 520 270 10 50 551 75 578 6.30e-120 365
Msa1147010 MtrunA17_Chr4g0069891 38.462 533 289 12 47 555 76 593 9.35e-119 363
Msa1147010 MtrunA17_Chr7g0269521 42.946 482 230 11 111 555 89 562 2.33e-118 361
Msa1147010 MtrunA17_Chr1g0195351 43.432 472 220 12 122 555 91 553 1.04e-116 356
Msa1147010 MtrunA17_Chr8g0354911 43.035 481 222 10 119 555 140 612 2.19e-113 350
Msa1147010 MtrunA17_Chr1g0192311 40.798 451 248 10 117 551 119 566 1.63e-112 347
Msa1147010 MtrunA17_Chr1g0192281 40.798 451 248 10 117 551 119 566 1.63e-112 347
Msa1147010 MtrunA17_Chr1g0194091 39.746 473 249 7 115 555 101 569 2.11e-112 346
Msa1147010 MtrunA17_Chr1g0192321 38.618 492 266 10 96 554 94 582 2.65e-112 346
Msa1147010 MtrunA17_Chr1g0194081 37.640 534 291 11 49 555 45 563 6.06e-111 342
Msa1147010 MtrunA17_Chr7g0272151 35.101 547 314 11 36 554 49 582 1.36e-109 339
Msa1147010 MtrunA17_Chr3g0080381 41.296 494 245 11 104 555 138 628 1.51e-109 340
Msa1147010 MtrunA17_Chr4g0000121 39.690 451 251 9 118 551 107 553 7.60e-107 332
Msa1147010 MtrunA17_Chr1g0192301 39.159 452 254 9 117 551 124 571 8.06e-106 329
Msa1147010 MtrunA17_Chr1g0195311 55.160 281 117 5 279 555 39 314 2.57e-105 319
Msa1147010 MtrunA17_Chr7g0270661 37.764 474 253 7 106 539 82 553 1.04e-99 313
Msa1147010 MtrunA17_Chr7g0270671 37.764 474 253 7 106 539 82 553 1.04e-99 313
Msa1147010 MtrunA17_Chr7g0270651 34.542 524 299 11 53 545 43 553 4.04e-99 311
Msa1147010 MtrunA17_Chr2g0295531 33.984 512 314 10 53 552 44 543 6.34e-97 307
Msa1147010 MtrunA17_Chr7g0270631 34.924 524 297 10 53 545 31 541 1.37e-95 315
Msa1147010 MtrunA17_Chr7g0270631 33.271 538 293 10 53 544 579 1096 9.26e-85 285
Msa1147010 MtrunA17_Chr4g0067611 37.310 461 251 11 122 554 121 571 4.65e-95 301
Msa1147010 MtrunA17_Chr2g0295551 36.382 503 272 13 95 554 66 563 4.90e-95 301
Msa1147010 MtrunA17_Chr7g0234711 61.304 230 86 2 327 555 42 269 1.09e-94 290
Msa1147010 MtrunA17_Chr4g0067601 36.853 464 249 10 122 554 121 571 4.71e-93 296
Msa1147010 MtrunA17_Chr7g0270691 33.613 476 291 9 100 555 79 549 2.19e-90 288
Msa1147010 MtrunA17_Chr8g0384121 35.084 533 283 17 56 554 60 563 3.84e-90 288
Msa1147010 MtrunA17_Chr3g0129921 34.530 585 305 20 19 554 8 563 1.66e-89 286
Msa1147010 MtrunA17_Chr2g0301931 48.780 287 138 5 270 555 14 292 2.23e-89 277
Msa1147010 MtrunA17_Chr2g0302001 46.619 281 141 4 278 555 163 437 6.96e-87 275
Msa1147010 MtrunA17_Chr2g0295541 34.927 481 261 11 122 554 118 594 5.18e-85 275
Msa1147010 MtrunA17_Chr5g0437831 38.529 340 198 5 221 555 50 383 3.19e-80 256
Msa1147010 MtrunA17_Chr8g0380581 38.710 341 201 5 214 552 39 373 1.03e-78 252
Msa1147010 MtrunA17_Chr7g0268241 40.190 316 175 4 241 555 48 350 7.39e-74 239
Msa1147010 MtrunA17_Chr2g0334111 39.683 315 174 4 242 555 24 323 2.24e-72 234
Msa1147010 MtrunA17_Chr7g0271381 31.660 518 311 18 56 555 64 556 1.97e-62 214
Msa1147010 MtrunA17_Chr6g0487101 36.066 305 167 7 251 544 93 380 7.66e-49 173
Msa1147010 MtrunA17_Chr6g0453551 32.026 306 182 7 243 538 6 295 3.94e-48 169
Msa1147010 MtrunA17_Chr1g0194311 33.016 315 184 7 240 544 71 368 5.05e-48 171
Msa1147010 MtrunA17_Chr8g0389771 34.385 317 176 8 244 546 81 379 4.02e-46 166
Msa1147010 MtrunA17_Chr2g0299431 39.224 232 138 2 218 448 29 258 8.51e-46 162
Msa1147010 MtrunA17_Chr8g0391261 53.237 139 63 1 417 555 30 166 7.91e-45 155
Msa1147010 MtrunA17_Chr7g0258341 32.588 313 187 6 243 545 90 388 2.62e-44 161
Msa1147010 MtrunA17_Chr7g0217941 30.742 283 173 4 245 517 8 277 2.11e-43 157
Msa1147010 MtrunA17_Chr5g0446301 33.010 309 178 7 249 545 67 358 9.84e-43 156
Msa1147010 MtrunA17_Chr4g0070051 31.949 313 181 8 243 545 54 344 1.06e-41 153
Msa1147010 MtrunA17_Chr6g0466961 31.915 282 167 5 241 517 38 299 1.16e-40 150
Msa1147010 MtrunA17_Chr6g0466951 30.851 282 170 6 241 517 67 328 6.44e-39 145
Msa1147010 MtrunA17_Chr4g0037751 31.511 311 184 9 243 544 71 361 4.82e-37 140
Msa1147010 MtrunA17_Chr5g0399221 28.797 316 198 6 243 547 63 362 8.76e-37 140
Msa1147010 MtrunA17_Chr1g0161731 31.022 274 167 5 251 517 57 315 1.13e-36 139
Msa1147010 MtrunA17_Chr5g0420831 31.746 315 178 9 243 544 71 361 1.16e-36 140
Msa1147010 MtrunA17_Chr7g0265201 30.625 320 187 9 238 546 92 387 5.70e-33 130
Msa1147010 MtrunA17_Chr7g0234731 37.441 211 112 8 124 326 120 318 2.57e-30 120
Msa1147010 MtrunA17_Chr8g0391281 34.211 228 131 5 113 324 86 310 7.31e-30 119
Msa1147010 MtrunA17_Chr5g0440871 27.742 310 198 7 239 546 35 320 9.89e-30 119
Msa1147010 MtrunA17_Chr2g0294321 28.483 323 207 8 228 544 42 346 2.25e-29 119
Msa1147010 MtrunA17_Chr6g0459781 35.465 172 99 3 243 404 13 182 7.47e-26 105
Msa1147010 MtrunA17_Chr8g0351871 25.704 284 184 6 243 517 33 298 3.59e-25 106
Msa1147010 MtrunA17_Chr2g0314691 31.527 203 120 5 344 544 16 201 4.47e-25 103
Msa1147010 MtrunA17_Chr4g0025841 29.278 263 169 4 230 492 24 269 9.42e-24 100
Msa1147010 MtrunA17_Chr2g0295851 25.938 320 210 8 228 544 41 336 1.39e-22 99.4
Msa1147010 MtrunA17_Chr5g0437821 32.576 132 88 1 356 486 4 135 1.89e-22 93.6
Msa1147010 MtrunA17_Chr5g0440901 31.126 151 94 2 337 487 3 143 2.10e-19 85.1
Msa1147010 MtrunA17_Chr7g0265161 29.609 179 93 4 312 485 9 159 4.11e-17 80.9
Msa1147010 MtrunA17_Chr5g0440891 30.000 160 105 2 243 402 48 200 1.00e-15 76.3
Msa1147010 MtrunA17_Chr6g0459791 37.302 126 64 5 420 544 5 116 8.43e-15 71.2
Msa1147010 MtrunA17_Chr4g0073911 29.714 175 113 4 259 426 24 195 6.68e-14 71.6
Msa1147010 MtrunA17_Chr6g0460141 31.429 140 88 3 271 402 5 144 1.02e-13 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1147010 AT1G11580.2 56.614 567 219 10 3 555 25 578 0.0 620
Msa1147010 AT1G11580.1 56.560 564 224 9 3 555 4 557 0.0 619
Msa1147010 AT5G53370.1 44.487 517 260 10 56 555 79 585 5.15e-147 436
Msa1147010 AT5G53370.2 44.487 517 260 10 56 555 115 621 7.95e-147 436
Msa1147010 AT2G45220.1 47.287 516 224 16 53 555 31 511 2.81e-143 423
Msa1147010 AT3G49220.1 43.689 515 266 9 56 555 91 596 4.29e-143 426
Msa1147010 AT3G49220.3 43.689 515 266 9 56 555 136 641 1.70e-142 426
Msa1147010 AT3G43270.1 47.072 461 219 8 111 555 74 525 3.46e-142 421
Msa1147010 AT4G33220.1 46.681 467 213 10 118 555 64 523 7.99e-138 410
Msa1147010 AT3G14310.1 43.623 541 259 12 53 555 60 592 2.79e-136 408
Msa1147010 AT3G59010.1 48.758 443 201 8 123 555 102 528 7.17e-136 405
Msa1147010 AT2G43050.1 47.738 442 199 10 123 555 98 516 1.67e-133 399
Msa1147010 AT1G11590.1 41.774 541 273 13 39 555 2 524 1.85e-132 396
Msa1147010 AT1G53830.1 43.045 532 261 11 56 555 66 587 4.12e-131 395
Msa1147010 AT5G04960.1 46.364 440 216 5 122 551 131 560 1.59e-130 392
Msa1147010 AT4G03930.1 40.262 534 291 10 39 555 2 524 2.53e-130 391
Msa1147010 AT4G02300.1 44.889 450 228 6 119 555 90 532 7.61e-130 390
Msa1147010 AT4G33220.2 52.557 352 159 4 205 555 58 402 1.14e-129 385
Msa1147010 AT4G02320.1 43.355 459 230 7 116 555 71 518 2.00e-129 388
Msa1147010 AT5G27870.1 42.291 454 240 6 117 555 116 562 3.44e-129 395
Msa1147010 AT3G05620.1 42.617 535 264 13 49 555 22 541 5.10e-128 385
Msa1147010 AT2G26440.1 40.153 523 286 8 50 555 35 547 1.19e-127 385
Msa1147010 AT3G60730.1 44.086 465 220 7 120 555 66 519 2.73e-127 383
Msa1147010 AT3G05610.1 41.962 479 244 10 99 555 99 565 3.22e-127 387
Msa1147010 AT3G27980.1 47.146 403 199 7 156 555 106 497 2.76e-126 379
Msa1147010 AT5G51490.1 47.188 409 199 5 155 555 137 536 2.08e-123 373
Msa1147010 AT5G51500.1 44.989 449 228 7 118 555 100 540 2.64e-123 373
Msa1147010 AT3G47400.1 44.889 450 231 7 118 555 150 594 4.53e-120 367
Msa1147010 AT3G10710.1 41.463 451 254 4 108 555 118 561 5.81e-118 360
Msa1147010 AT1G02810.1 42.147 503 225 11 112 555 82 577 9.22e-118 360
Msa1147010 AT2G47550.1 43.683 467 223 10 122 555 99 558 4.80e-117 358
Msa1147010 AT4G02330.1 42.443 483 222 12 122 555 96 571 4.97e-117 358
Msa1147010 AT1G53840.1 39.474 532 271 14 49 549 70 581 9.68e-117 358
Msa1147010 AT5G49180.1 37.143 560 314 13 18 551 19 566 2.40e-116 356
Msa1147010 AT2G26450.1 38.571 490 260 10 93 555 136 611 1.56e-114 353
Msa1147010 AT1G23200.1 50.287 348 154 5 211 555 223 554 6.81e-113 347
Msa1147010 AT4G33230.1 39.468 489 263 11 91 555 127 606 1.16e-112 348
Msa1147010 AT3G10720.2 42.227 476 231 10 119 555 145 615 6.30e-111 344
Msa1147010 AT3G14300.1 38.657 551 290 12 27 541 416 954 3.74e-110 351
Msa1147010 AT5G20860.2 42.141 439 233 8 126 555 112 538 4.95e-110 339
Msa1147010 AT4G00190.1 43.607 438 216 10 122 555 64 474 2.42e-109 335
Msa1147010 AT5G04970.1 40.756 476 238 9 119 555 150 620 7.76e-106 331
Msa1147010 AT1G11370.1 58.607 244 101 0 240 483 43 286 8.16e-104 314
Msa1147010 AT3G06830.1 38.197 466 261 12 110 552 104 565 2.13e-103 323
Msa1147010 AT4G15980.1 44.800 375 199 5 182 551 327 698 2.15e-98 313
Msa1147010 AT4G15980.2 44.800 375 199 5 182 551 337 708 3.15e-98 313
Msa1147010 AT3G10720.1 53.817 262 118 2 294 555 1 259 2.85e-94 289
Msa1147010 AT5G20860.1 38.915 424 210 7 126 540 112 495 5.60e-89 283
Msa1147010 AT5G09760.1 36.015 522 282 15 53 543 46 546 8.02e-88 282
Msa1147010 AT5G09760.2 36.015 522 282 15 53 543 72 572 9.18e-88 282
Msa1147010 AT2G47030.1 41.644 365 193 6 204 555 231 588 6.67e-86 278
Msa1147010 AT5G64640.1 35.028 531 286 17 53 547 94 601 4.71e-84 273
Msa1147010 AT2G47040.1 41.713 362 194 6 204 555 241 595 5.50e-83 270
Msa1147010 AT3G62170.1 32.200 559 308 14 51 555 47 588 1.91e-80 263
Msa1147010 AT1G44980.1 42.609 230 126 3 181 407 16 242 9.90e-54 182
Msa1147010 AT2G21610.1 34.098 305 177 7 243 545 51 333 9.02e-47 167
Msa1147010 AT2G21610.2 34.098 305 177 7 243 545 56 338 1.40e-46 167
Msa1147010 AT3G29090.1 31.579 285 172 4 243 517 7 278 2.57e-46 165
Msa1147010 AT1G05310.1 32.710 321 186 6 238 545 86 389 2.59e-46 167
Msa1147010 AT2G36710.1 32.602 319 192 7 240 549 86 390 2.32e-44 162
Msa1147010 AT2G36700.1 32.899 307 182 6 245 544 44 333 7.11e-44 159
Msa1147010 AT5G19730.1 33.660 306 175 7 251 545 94 382 7.22e-44 160
Msa1147010 AT2G19150.1 31.034 319 198 6 239 551 37 339 8.24e-37 140
Msa1147010 AT5G07430.1 28.495 372 221 11 195 544 7 355 4.40e-36 138
Msa1147010 AT5G47500.1 28.115 313 198 6 243 544 61 357 9.94e-36 137
Msa1147010 AT5G55590.1 30.938 320 190 9 239 545 78 379 1.70e-35 137
Msa1147010 AT3G49220.2 31.313 297 179 9 56 337 136 422 1.40e-34 135
Msa1147010 AT3G17060.1 28.155 309 199 6 242 544 45 336 1.48e-34 134
Msa1147010 AT5G07420.1 30.225 311 186 9 243 544 67 355 2.58e-34 133
Msa1147010 AT3G24130.1 29.333 300 185 6 230 517 20 304 2.64e-33 130
Msa1147010 AT5G18990.1 29.720 286 175 5 243 517 29 299 3.30e-33 129
Msa1147010 AT2G19150.2 31.395 258 164 3 239 492 37 285 6.16e-33 127
Msa1147010 AT5G55590.2 31.418 261 153 7 239 486 78 325 1.25e-32 128
Msa1147010 AT1G69940.1 28.440 327 202 10 229 544 50 355 3.52e-32 127
Msa1147010 AT5G61680.1 28.617 311 192 8 243 544 69 358 8.71e-32 126
Msa1147010 AT5G07410.1 28.135 327 203 10 229 544 50 355 2.13e-31 125
Msa1147010 AT5G26810.1 27.193 342 206 7 231 546 11 335 3.94e-29 118
Msa1147010 AT2G47280.1 29.010 293 184 5 234 517 26 303 1.44e-28 117

Find 139 sgRNAs with CRISPR-Local

Find 384 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCCCTTCCCAAAACTTTC+TGG 0.151586 7_4:+25340134 Msa1147010:CDS
GGGCCACCAACTTGCATTTC+TGG 0.169311 7_4:-25341535 None:intergenic
ACTTGTCCATGAACAGAATT+TGG 0.169985 7_4:+25340488 Msa1147010:CDS
TGGCTGCGCCTGCCGTATTT+TGG 0.184844 7_4:-25341343 None:intergenic
TTGGTTGGCCATGGGCTTTC+GGG 0.209872 7_4:-25341555 None:intergenic
GTATGTTATCTATGTGAAAA+AGG 0.237847 7_4:+25340906 Msa1147010:CDS
GAGGATTAACCAGAAAGTTT+TGG 0.241452 7_4:-25340143 None:intergenic
TCTTGAGATGAGTAGAAATA+AGG 0.241933 7_4:-25340195 None:intergenic
TTTGGTTGGCCATGGGCTTT+CGG 0.265463 7_4:-25341556 None:intergenic
GGTACCATTGACTTCATCTT+TGG 0.274786 7_4:+25341494 Msa1147010:CDS
AAGCAAAGATAGGAGGCTTT+TGG 0.282961 7_4:+25340771 Msa1147010:CDS
TACAAAGAGAACATAGAAAT+TGG 0.317816 7_4:+25340934 Msa1147010:CDS
TTTGCAGCTGCGGTTGGGGA+TGG 0.318538 7_4:+25341296 Msa1147010:intron
TCAGACCTTAAGCCGGTTGC+AGG 0.319584 7_4:+25341662 Msa1147010:CDS
TTCATTGATGAAACATTGAT+TGG 0.340270 7_4:+25340727 Msa1147010:CDS
CTTCTCTAGGGCTGTTAATT+CGG 0.340587 7_4:-25340432 None:intergenic
ACCGGGGTCTTCTCGACCTT+GGG 0.342397 7_4:-25341594 None:intergenic
TACCGTGACTCCGTCATTAC+AGG 0.352943 7_4:+25341473 Msa1147010:CDS
TCAATGTTTCATCAATGAAT+TGG 0.363111 7_4:-25340723 None:intergenic
CGAGTCCCAAATTCTGTTCA+TGG 0.391468 7_4:-25340494 None:intergenic
TGTGGTGGACTTGGTTAATA+AGG 0.395734 7_4:-25340368 None:intergenic
AGGCTCCATCAAAACATTCC+TGG 0.395912 7_4:+25341682 Msa1147010:CDS
TTGCAGCTGCGGTTGGGGAT+GGG 0.396223 7_4:+25341297 Msa1147010:intron
GGTTTATAGCACAAGACATT+TGG 0.398305 7_4:+25341318 Msa1147010:CDS
GGGCTGTAAACATGTTGTTT+TGG 0.401016 7_4:-25341574 None:intergenic
GACCGGGGTCTTCTCGACCT+TGG 0.405635 7_4:-25341595 None:intergenic
ACTTGCTTGGATGGATTAGA+AGG 0.410175 7_4:+25340598 Msa1147010:CDS
TAAGGTCTGAACTTGGTGTT+AGG 0.411739 7_4:-25341649 None:intergenic
CGTTATGGAAAATGACCTTC+AGG 0.413872 7_4:+25340633 Msa1147010:CDS
AGGTACATCTCGGGTCGTTA+TGG 0.421631 7_4:+25340618 Msa1147010:CDS
AGACATTTGGTTCCAAAATA+CGG 0.422166 7_4:+25341331 Msa1147010:CDS
CCCACTCAGCCCATCCTGTT+GGG 0.422248 7_4:-25341769 None:intergenic
CTCAAAGCAATTTCTTCTCT+AGG 0.423277 7_4:-25340445 None:intergenic
TGGAGCCTGCAACCGGCTTA+AGG 0.427115 7_4:-25341667 None:intergenic
CACGAACCATGCAACTTGCT+TGG 0.427409 7_4:+25340585 Msa1147010:CDS
GAGTGACTGTGAACAACTAA+TGG 0.436097 7_4:+25340465 Msa1147010:CDS
TACTTTGTCTTACCATTGTC+AGG 0.437385 7_4:-25340886 None:intergenic
TCCTCAACCATACATTTCCT+TGG 0.438204 7_4:-25341946 None:intergenic
TTGAATGTGTGTGGTGGACT+TGG 0.438267 7_4:-25340377 None:intergenic
GAGAGCCACTGCCTGGTGCT+TGG 0.443278 7_4:-25341363 None:intergenic
AACCATGCAACTTGCTTGGA+TGG 0.446545 7_4:+25340589 Msa1147010:CDS
AGTATCTGACGTCCCAACTT+TGG 0.448646 7_4:+25340309 Msa1147010:CDS
GGCAGGCGCAGCCAAGCACC+AGG 0.455345 7_4:+25341352 Msa1147010:CDS
CTTGAGATGAGTAGAAATAA+GGG 0.456619 7_4:-25340194 None:intergenic
TGAGTGGGATGCTGCGAGTA+AGG 0.459391 7_4:+25341784 Msa1147010:CDS
GTCCGCGGTTGGGGACATAA+AGG 0.463856 7_4:+25340795 Msa1147010:CDS
CGTGGGTTACAAGCAAAGAT+AGG 0.464160 7_4:+25340761 Msa1147010:CDS
CGCAGCCAAGCACCAGGCAG+TGG 0.464837 7_4:+25341358 Msa1147010:CDS
CTTGTCCATGAACAGAATTT+GGG 0.465545 7_4:+25340489 Msa1147010:CDS
ACAAGAGTACGTGCAAGCTT+TGG 0.467219 7_4:-25340345 None:intergenic
CAAGACTGTGGCTGAGGCTG+TGG 0.477930 7_4:+25340855 Msa1147010:CDS
TCCCACTCAGCCCATCCTGT+TGG 0.478365 7_4:-25341770 None:intergenic
GTCCTTGAGTATTTCTTCCA+TGG 0.480395 7_4:-25341710 None:intergenic
GCCAAGAGAGTCACCTGGCC+AGG 0.482006 7_4:+25341866 Msa1147010:CDS
AACTAATCCAAGGAAATGTA+TGG 0.483943 7_4:+25341939 Msa1147010:CDS
GGCTCCATCAAAACATTCCT+GGG 0.484471 7_4:+25341683 Msa1147010:CDS
TTTCTGCAAACACTGTATTA+CGG 0.488447 7_4:+25341809 Msa1147010:CDS
GGCAAATGTTGTGGTGGCTC+AGG 0.490604 7_4:+25340816 Msa1147010:CDS
ACCTGGCCAGGTGACTCTCT+TGG 0.507212 7_4:-25341867 None:intergenic
ATGAACAATGGACCGGGTGC+TGG 0.507682 7_4:+25341839 Msa1147010:CDS
TTGAGTATTTCTTCCATGGA+CGG 0.507771 7_4:-25341706 None:intergenic
GACAGCCACATTGACCCAAC+AGG 0.508812 7_4:+25341755 Msa1147010:CDS
CAAGTTCAAGACTGTGGCTG+AGG 0.510031 7_4:+25340849 Msa1147010:CDS
AAACATTCCTGGGCCGTCCA+TGG 0.513125 7_4:+25341693 Msa1147010:CDS
ATATTACAAGCCTTCAGTAA+AGG 0.513499 7_4:-25341981 None:intergenic
TCAAAGCAATTTCTTCTCTA+GGG 0.514446 7_4:-25340444 None:intergenic
AGCTAGAGAAGATCTAGCTC+TGG 0.514776 7_4:-25340665 None:intergenic
ATTTCTTCCATGGACGGCCC+AGG 0.520065 7_4:-25341700 None:intergenic
GATTGGAGAATTTCCTTCGT+GGG 0.523944 7_4:+25340744 Msa1147010:CDS
AAATGTATGGTTGAGGAACA+CGG 0.534229 7_4:+25341952 Msa1147010:CDS
CATATCAACATGCACATACA+TGG 0.534878 7_4:+25340548 Msa1147010:CDS
TCCAAGGAAATGTATGGTTG+AGG 0.535757 7_4:+25341945 Msa1147010:CDS
CACACACATTCAAAATGCTA+TGG 0.547746 7_4:+25340387 Msa1147010:CDS
AATGTATGGTTGAGGAACAC+GGG 0.551255 7_4:+25341953 Msa1147010:CDS
AGAGTACATGAACAATGGAC+CGG 0.553067 7_4:+25341832 Msa1147010:CDS
AATGTTGTGGTGGCTCAGGA+TGG 0.554448 7_4:+25340820 Msa1147010:CDS
ATTTGGTTCCAAAATACGGC+AGG 0.554840 7_4:+25341335 Msa1147010:CDS
CGACACGGAGAGCCACTGCC+TGG 0.558715 7_4:-25341370 None:intergenic
GATGCTCGTTGGTGATGGTA+TGG 0.559856 7_4:+25340975 Msa1147010:CDS
AACAACATGTTTACAGCCCA+AGG 0.562803 7_4:+25341578 Msa1147010:CDS
GTGGTGGCTCAGGATGGGAG+TGG 0.566222 7_4:+25340826 Msa1147010:CDS
TGATTGGAGAATTTCCTTCG+TGG 0.566291 7_4:+25340743 Msa1147010:CDS
CAGGCAGTGGCTCTCCGTGT+CGG 0.568536 7_4:+25341371 Msa1147010:CDS
ACCGGCTTAAGGTCTGAACT+TGG 0.570193 7_4:-25341656 None:intergenic
GATGACATGATAACCTGGCC+AGG 0.573341 7_4:-25341879 None:intergenic
TGGATTAGAAGGTACATCTC+GGG 0.575964 7_4:+25340609 Msa1147010:CDS
GTCAATGGTACCTGTAATGA+CGG 0.576527 7_4:-25341483 None:intergenic
TGCCTTTATGTCCCCAACCG+CGG 0.578312 7_4:-25340797 None:intergenic
GTTGGTGGCCCGAAAGCCCA+TGG 0.580256 7_4:+25341547 Msa1147010:CDS
GTTTCCAAAGATGAAGTCAA+TGG 0.582146 7_4:-25341498 None:intergenic
GGCAACGGTTGATGACAGAT+TGG 0.583641 7_4:-25341400 None:intergenic
ATGGATTAGAAGGTACATCT+CGG 0.583723 7_4:+25340608 Msa1147010:CDS
CCACATTGACCCAACAGGAT+GGG 0.583831 7_4:+25341760 Msa1147010:CDS
GCCACATTGACCCAACAGGA+TGG 0.584474 7_4:+25341759 Msa1147010:CDS
GAAAGGCGTCAATGCGGCAA+CGG 0.586577 7_4:-25341415 None:intergenic
CCCAACAGGATGGGCTGAGT+GGG 0.587397 7_4:+25341769 Msa1147010:CDS
CTCTGGATATCAAGTCCTGA+AGG 0.591651 7_4:-25340648 None:intergenic
ATCGTGTTTAGCTCATGTAT+CGG 0.592897 7_4:+25340285 Msa1147010:CDS
GTCACGGTAAAACTGTCGGT+TGG 0.593884 7_4:-25341459 None:intergenic
ATGGATGCAACAATAATCAC+AGG 0.596549 7_4:+25340994 Msa1147010:CDS
TTTCATCAATGAATTGGTCA+CGG 0.599502 7_4:-25340717 None:intergenic
TGTCATCAAAACTGCTGCAG+AGG 0.604794 7_4:+25341895 Msa1147010:CDS
ACCAAGTTCAGACCTTAAGC+CGG 0.605269 7_4:+25341655 Msa1147010:CDS
ACAGTAAACACGGGGAGCTG+TGG 0.608684 7_4:-25340242 None:intergenic
GTTCCAGAAATGCAAGTTGG+TGG 0.609042 7_4:+25341532 Msa1147010:CDS
CATAAAGGCAAATGTTGTGG+TGG 0.610350 7_4:+25340810 Msa1147010:CDS
AATGTGATGCTCGTTGGTGA+TGG 0.611460 7_4:+25340970 Msa1147010:CDS
AAAACAAATGTGATGCTCGT+TGG 0.616382 7_4:+25340964 Msa1147010:CDS
CAGATTGGTCAGAGCCGACA+CGG 0.619345 7_4:-25341385 None:intergenic
ATGTTGTGGTGGCTCAGGAT+GGG 0.620089 7_4:+25340821 Msa1147010:CDS
CCCATCCTGTTGGGTCAATG+TGG 0.620356 7_4:-25341760 None:intergenic
TACCTGTAATGACGGAGTCA+CGG 0.621284 7_4:-25341475 None:intergenic
CTCTTGGCAGTACCAGCACC+CGG 0.624045 7_4:-25341851 None:intergenic
AGCATGTTCACAGTAAACAC+GGG 0.626313 7_4:-25340251 None:intergenic
ACAGTAGCACAACTAATCCA+AGG 0.626493 7_4:+25341929 Msa1147010:CDS
ACCCAACAGGATGGGCTGAG+TGG 0.626812 7_4:+25341768 Msa1147010:CDS
ATCCATCCAAGCAAGTTGCA+TGG 0.627349 7_4:-25340591 None:intergenic
GTGGCATCTGCACCTGACAA+TGG 0.627680 7_4:+25340874 Msa1147010:CDS
TACGGAGAGTACATGAACAA+TGG 0.632251 7_4:+25341827 Msa1147010:CDS
TGCGTAAAGAGTGTCTTGAA+AGG 0.633032 7_4:-25341432 None:intergenic
GGGTTACAAGCAAAGATAGG+AGG 0.637188 7_4:+25340764 Msa1147010:CDS
GAAGACCCCGGTCAAAACAC+AGG 0.640624 7_4:+25341605 Msa1147010:CDS
GAGCATGTTCACAGTAAACA+CGG 0.641229 7_4:-25340252 None:intergenic
GTCCATGGAAGAAATACTCA+AGG 0.649666 7_4:+25341708 Msa1147010:CDS
ACCTTCAAAAGTTCAACCGT+CGG 0.654500 7_4:+25341045 Msa1147010:CDS
GGACATAAAGGCAAATGTTG+TGG 0.654505 7_4:+25340807 Msa1147010:CDS
TTATGATAGCAACTAAAGAG+AGG 0.658604 7_4:-25340162 None:intergenic
CGGAGTCACGGTAAAACTGT+CGG 0.662230 7_4:-25341463 None:intergenic
AAACACGGGGAGCTGTGGTG+AGG 0.667004 7_4:-25340237 None:intergenic
TGTGTTCCAGAAATGCAAGT+TGG 0.667091 7_4:+25341529 Msa1147010:CDS
GAGTACATGAACAATGGACC+GGG 0.667279 7_4:+25341833 Msa1147010:CDS
TCTTTGCTTGTAACCCACGA+AGG 0.680540 7_4:-25340757 None:intergenic
ATGTATGGTTGAGGAACACG+GGG 0.684257 7_4:+25341954 Msa1147010:CDS
GCCCAAGGTCGAGAAGACCC+CGG 0.691832 7_4:+25341593 Msa1147010:CDS
GTACTGCCAAGAGAGTCACC+TGG 0.695643 7_4:+25341861 Msa1147010:CDS
TGTCTTGAAAGGCGTCAATG+CGG 0.736047 7_4:-25341421 None:intergenic
GCATGTTCACAGTAAACACG+GGG 0.741066 7_4:-25340250 None:intergenic
GAGTGGCAAGTTCAAGACTG+TGG 0.790308 7_4:+25340843 Msa1147010:CDS
TGTATGGTTGAGGAACACGG+GGG 0.859430 7_4:+25341955 Msa1147010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGGTAATTACAAAAAAA+GGG - chr7_4:25341082-25341101 None:intergenic 15.0%
!! AAATATACATGAAAATGAAA+TGG - chr7_4:25341099-25341118 None:intergenic 15.0%
!! AAATGGTAATTACAAAAAAA+GGG - chr7_4:25341082-25341101 None:intergenic 15.0%
!! AAATATACATGAAAATGAAA+TGG - chr7_4:25341099-25341118 None:intergenic 15.0%
!! TATGTTATCTATGTGAAAAA+GGG + chr7_4:25340907-25340926 Msa1147010:CDS 20.0%
!! GAAATGGTAATTACAAAAAA+AGG - chr7_4:25341083-25341102 None:intergenic 20.0%
!!! ATTTAGATCTAAAACAAATG+AGG - chr7_4:25341201-25341220 None:intergenic 20.0%
!! AAGTTCATATTCTAATTGTA+TGG + chr7_4:25341230-25341249 Msa1147010:intron 20.0%
!! TATGTTATCTATGTGAAAAA+GGG + chr7_4:25340907-25340926 Msa1147010:CDS 20.0%
!! GAAATGGTAATTACAAAAAA+AGG - chr7_4:25341083-25341102 None:intergenic 20.0%
!!! ATTTAGATCTAAAACAAATG+AGG - chr7_4:25341201-25341220 None:intergenic 20.0%
!! AAGTTCATATTCTAATTGTA+TGG + chr7_4:25341230-25341249 Msa1147010:intron 20.0%
! TCAATGTTTCATCAATGAAT+TGG - chr7_4:25340726-25340745 None:intergenic 25.0%
! TTCATTGATGAAACATTGAT+TGG + chr7_4:25340727-25340746 Msa1147010:CDS 25.0%
! GTATGTTATCTATGTGAAAA+AGG + chr7_4:25340906-25340925 Msa1147010:CDS 25.0%
! TACAAAGAGAACATAGAAAT+TGG + chr7_4:25340934-25340953 Msa1147010:CDS 25.0%
!! GCAACTTAAATTTTATCGAT+GGG + chr7_4:25341016-25341035 Msa1147010:CDS 25.0%
!!! AGTATGAGCTTTTTTTGATA+GGG - chr7_4:25341176-25341195 None:intergenic 25.0%
!!! TTTGGTTAGTGTTGATATTT+GGG - chr7_4:25341264-25341283 None:intergenic 25.0%
!!! ATTTGGTTAGTGTTGATATT+TGG - chr7_4:25341265-25341284 None:intergenic 25.0%
! ACACTAACCAAATAAAAATC+TGG + chr7_4:25341272-25341291 Msa1147010:intron 25.0%
!! TGCAAAACCAGATTTTTATT+TGG - chr7_4:25341282-25341301 None:intergenic 25.0%
! TCAATGTTTCATCAATGAAT+TGG - chr7_4:25340726-25340745 None:intergenic 25.0%
! TTCATTGATGAAACATTGAT+TGG + chr7_4:25340727-25340746 Msa1147010:CDS 25.0%
! GTATGTTATCTATGTGAAAA+AGG + chr7_4:25340906-25340925 Msa1147010:CDS 25.0%
! TACAAAGAGAACATAGAAAT+TGG + chr7_4:25340934-25340953 Msa1147010:CDS 25.0%
!! GCAACTTAAATTTTATCGAT+GGG + chr7_4:25341016-25341035 Msa1147010:CDS 25.0%
!!! AGTATGAGCTTTTTTTGATA+GGG - chr7_4:25341176-25341195 None:intergenic 25.0%
!!! TTTGGTTAGTGTTGATATTT+GGG - chr7_4:25341264-25341283 None:intergenic 25.0%
!!! ATTTGGTTAGTGTTGATATT+TGG - chr7_4:25341265-25341284 None:intergenic 25.0%
! ACACTAACCAAATAAAAATC+TGG + chr7_4:25341272-25341291 Msa1147010:intron 25.0%
!! TGCAAAACCAGATTTTTATT+TGG - chr7_4:25341282-25341301 None:intergenic 25.0%
! AGGATTAACCAGAAAGTTTT+GGG - chr7_4:25340145-25340164 None:intergenic 30.0%
TTATGATAGCAACTAAAGAG+AGG - chr7_4:25340165-25340184 None:intergenic 30.0%
CTTGAGATGAGTAGAAATAA+GGG - chr7_4:25340197-25340216 None:intergenic 30.0%
TCTTGAGATGAGTAGAAATA+AGG - chr7_4:25340198-25340217 None:intergenic 30.0%
!! AATTCGGCTTTTGATAACAT+TGG - chr7_4:25340419-25340438 None:intergenic 30.0%
TCAAAGCAATTTCTTCTCTA+GGG - chr7_4:25340447-25340466 None:intergenic 30.0%
!!! TCTTGTTGTTTTTCCTCAAA+AGG + chr7_4:25340693-25340712 Msa1147010:CDS 30.0%
TTTCATCAATGAATTGGTCA+CGG - chr7_4:25340720-25340739 None:intergenic 30.0%
!!! GAGCATCACATTTGTTTTTT+TGG - chr7_4:25340962-25340981 None:intergenic 30.0%
! GGCAACTTAAATTTTATCGA+TGG + chr7_4:25341015-25341034 Msa1147010:CDS 30.0%
GGTAATTACAAAAAAAGGGA+AGG - chr7_4:25341078-25341097 None:intergenic 30.0%
!!! GTATGAGCTTTTTTTGATAG+GGG - chr7_4:25341175-25341194 None:intergenic 30.0%
!!! GAGTATGAGCTTTTTTTGAT+AGG - chr7_4:25341177-25341196 None:intergenic 30.0%
! AGACATTTGGTTCCAAAATA+CGG + chr7_4:25341331-25341350 Msa1147010:CDS 30.0%
!!! TGTAAACATGTTGTTTTGGT+TGG - chr7_4:25341573-25341592 None:intergenic 30.0%
TTTCTGCAAACACTGTATTA+CGG + chr7_4:25341809-25341828 Msa1147010:CDS 30.0%
AACTAATCCAAGGAAATGTA+TGG + chr7_4:25341939-25341958 Msa1147010:CDS 30.0%
! AGGATTAACCAGAAAGTTTT+GGG - chr7_4:25340145-25340164 None:intergenic 30.0%
TTATGATAGCAACTAAAGAG+AGG - chr7_4:25340165-25340184 None:intergenic 30.0%
CTTGAGATGAGTAGAAATAA+GGG - chr7_4:25340197-25340216 None:intergenic 30.0%
TCTTGAGATGAGTAGAAATA+AGG - chr7_4:25340198-25340217 None:intergenic 30.0%
!! AATTCGGCTTTTGATAACAT+TGG - chr7_4:25340419-25340438 None:intergenic 30.0%
TCAAAGCAATTTCTTCTCTA+GGG - chr7_4:25340447-25340466 None:intergenic 30.0%
!!! TCTTGTTGTTTTTCCTCAAA+AGG + chr7_4:25340693-25340712 Msa1147010:CDS 30.0%
TTTCATCAATGAATTGGTCA+CGG - chr7_4:25340720-25340739 None:intergenic 30.0%
!!! GAGCATCACATTTGTTTTTT+TGG - chr7_4:25340962-25340981 None:intergenic 30.0%
! GGCAACTTAAATTTTATCGA+TGG + chr7_4:25341015-25341034 Msa1147010:CDS 30.0%
GGTAATTACAAAAAAAGGGA+AGG - chr7_4:25341078-25341097 None:intergenic 30.0%
!!! GTATGAGCTTTTTTTGATAG+GGG - chr7_4:25341175-25341194 None:intergenic 30.0%
!!! GAGTATGAGCTTTTTTTGAT+AGG - chr7_4:25341177-25341196 None:intergenic 30.0%
! AGACATTTGGTTCCAAAATA+CGG + chr7_4:25341331-25341350 Msa1147010:CDS 30.0%
!!! TGTAAACATGTTGTTTTGGT+TGG - chr7_4:25341573-25341592 None:intergenic 30.0%
TTTCTGCAAACACTGTATTA+CGG + chr7_4:25341809-25341828 Msa1147010:CDS 30.0%
AACTAATCCAAGGAAATGTA+TGG + chr7_4:25341939-25341958 Msa1147010:CDS 30.0%
!!! TAACCAGAAAGTTTTGGGAA+GGG - chr7_4:25340140-25340159 None:intergenic 35.0%
!!! TTAACCAGAAAGTTTTGGGA+AGG - chr7_4:25340141-25340160 None:intergenic 35.0%
! GAGGATTAACCAGAAAGTTT+TGG - chr7_4:25340146-25340165 None:intergenic 35.0%
GTGAGGTGAAAAAAGGAAAT+TGG - chr7_4:25340223-25340242 None:intergenic 35.0%
! ATCGTGTTTAGCTCATGTAT+CGG + chr7_4:25340285-25340304 Msa1147010:CDS 35.0%
! CATAGCATTTTGAATGTGTG+TGG - chr7_4:25340389-25340408 None:intergenic 35.0%
CACACACATTCAAAATGCTA+TGG + chr7_4:25340387-25340406 Msa1147010:CDS 35.0%
CTCAAAGCAATTTCTTCTCT+AGG - chr7_4:25340448-25340467 None:intergenic 35.0%
ACTTGTCCATGAACAGAATT+TGG + chr7_4:25340488-25340507 Msa1147010:CDS 35.0%
CTTGTCCATGAACAGAATTT+GGG + chr7_4:25340489-25340508 Msa1147010:CDS 35.0%
CATATCAACATGCACATACA+TGG + chr7_4:25340548-25340567 Msa1147010:CDS 35.0%
!! ATGGATTAGAAGGTACATCT+CGG + chr7_4:25340608-25340627 Msa1147010:CDS 35.0%
TACTTTGTCTTACCATTGTC+AGG - chr7_4:25340889-25340908 None:intergenic 35.0%
AAAACAAATGTGATGCTCGT+TGG + chr7_4:25340964-25340983 Msa1147010:CDS 35.0%
ATGGATGCAACAATAATCAC+AGG + chr7_4:25340994-25341013 Msa1147010:CDS 35.0%
GGTTTATAGCACAAGACATT+TGG + chr7_4:25341318-25341337 Msa1147010:CDS 35.0%
GTTTCCAAAGATGAAGTCAA+TGG - chr7_4:25341501-25341520 None:intergenic 35.0%
TTGAGTATTTCTTCCATGGA+CGG - chr7_4:25341709-25341728 None:intergenic 35.0%
! TGTTGTGATGCAATCTTTTC+TGG + chr7_4:25341733-25341752 Msa1147010:CDS 35.0%
!! GTTTTGATGACATGATAACC+TGG - chr7_4:25341887-25341906 None:intergenic 35.0%
AAATGTATGGTTGAGGAACA+CGG + chr7_4:25341952-25341971 Msa1147010:CDS 35.0%
!!! TAACCAGAAAGTTTTGGGAA+GGG - chr7_4:25340140-25340159 None:intergenic 35.0%
!!! TTAACCAGAAAGTTTTGGGA+AGG - chr7_4:25340141-25340160 None:intergenic 35.0%
! GAGGATTAACCAGAAAGTTT+TGG - chr7_4:25340146-25340165 None:intergenic 35.0%
GTGAGGTGAAAAAAGGAAAT+TGG - chr7_4:25340223-25340242 None:intergenic 35.0%
! ATCGTGTTTAGCTCATGTAT+CGG + chr7_4:25340285-25340304 Msa1147010:CDS 35.0%
! CATAGCATTTTGAATGTGTG+TGG - chr7_4:25340389-25340408 None:intergenic 35.0%
CACACACATTCAAAATGCTA+TGG + chr7_4:25340387-25340406 Msa1147010:CDS 35.0%
CTCAAAGCAATTTCTTCTCT+AGG - chr7_4:25340448-25340467 None:intergenic 35.0%
ACTTGTCCATGAACAGAATT+TGG + chr7_4:25340488-25340507 Msa1147010:CDS 35.0%
CTTGTCCATGAACAGAATTT+GGG + chr7_4:25340489-25340508 Msa1147010:CDS 35.0%
CATATCAACATGCACATACA+TGG + chr7_4:25340548-25340567 Msa1147010:CDS 35.0%
!! ATGGATTAGAAGGTACATCT+CGG + chr7_4:25340608-25340627 Msa1147010:CDS 35.0%
TACTTTGTCTTACCATTGTC+AGG - chr7_4:25340889-25340908 None:intergenic 35.0%
AAAACAAATGTGATGCTCGT+TGG + chr7_4:25340964-25340983 Msa1147010:CDS 35.0%
ATGGATGCAACAATAATCAC+AGG + chr7_4:25340994-25341013 Msa1147010:CDS 35.0%
GGTTTATAGCACAAGACATT+TGG + chr7_4:25341318-25341337 Msa1147010:CDS 35.0%
GTTTCCAAAGATGAAGTCAA+TGG - chr7_4:25341501-25341520 None:intergenic 35.0%
TTGAGTATTTCTTCCATGGA+CGG - chr7_4:25341709-25341728 None:intergenic 35.0%
! TGTTGTGATGCAATCTTTTC+TGG + chr7_4:25341733-25341752 Msa1147010:CDS 35.0%
!! GTTTTGATGACATGATAACC+TGG - chr7_4:25341887-25341906 None:intergenic 35.0%
AAATGTATGGTTGAGGAACA+CGG + chr7_4:25341952-25341971 Msa1147010:CDS 35.0%
!!! GTTTTGGGAAGGGATTTTCT+AGG - chr7_4:25340130-25340149 None:intergenic 40.0%
AATCCCTTCCCAAAACTTTC+TGG + chr7_4:25340134-25340153 Msa1147010:CDS 40.0%
AGCATGTTCACAGTAAACAC+GGG - chr7_4:25340254-25340273 None:intergenic 40.0%
GAGCATGTTCACAGTAAACA+CGG - chr7_4:25340255-25340274 None:intergenic 40.0%
!! TGTGGTGGACTTGGTTAATA+AGG - chr7_4:25340371-25340390 None:intergenic 40.0%
! AGCATTTTGAATGTGTGTGG+TGG - chr7_4:25340386-25340405 None:intergenic 40.0%
!! CTTCTCTAGGGCTGTTAATT+CGG - chr7_4:25340435-25340454 None:intergenic 40.0%
GAGTGACTGTGAACAACTAA+TGG + chr7_4:25340465-25340484 Msa1147010:CDS 40.0%
!! ACTTGCTTGGATGGATTAGA+AGG + chr7_4:25340598-25340617 Msa1147010:CDS 40.0%
! TGGATTAGAAGGTACATCTC+GGG + chr7_4:25340609-25340628 Msa1147010:CDS 40.0%
CGTTATGGAAAATGACCTTC+AGG + chr7_4:25340633-25340652 Msa1147010:CDS 40.0%
TGATTGGAGAATTTCCTTCG+TGG + chr7_4:25340743-25340762 Msa1147010:CDS 40.0%
GATTGGAGAATTTCCTTCGT+GGG + chr7_4:25340744-25340763 Msa1147010:CDS 40.0%
! AAGCAAAGATAGGAGGCTTT+TGG + chr7_4:25340771-25340790 Msa1147010:CDS 40.0%
GGACATAAAGGCAAATGTTG+TGG + chr7_4:25340807-25340826 Msa1147010:CDS 40.0%
CATAAAGGCAAATGTTGTGG+TGG + chr7_4:25340810-25340829 Msa1147010:CDS 40.0%
ACCTTCAAAAGTTCAACCGT+CGG + chr7_4:25341045-25341064 Msa1147010:CDS 40.0%
!!! AAAATCTGGTTTTGCAGCTG+CGG + chr7_4:25341286-25341305 Msa1147010:intron 40.0%
! ATTTGGTTCCAAAATACGGC+AGG + chr7_4:25341335-25341354 Msa1147010:CDS 40.0%
!! TGCGTAAAGAGTGTCTTGAA+AGG - chr7_4:25341435-25341454 None:intergenic 40.0%
GTCAATGGTACCTGTAATGA+CGG - chr7_4:25341486-25341505 None:intergenic 40.0%
!! GGTACCATTGACTTCATCTT+TGG + chr7_4:25341494-25341513 Msa1147010:CDS 40.0%
TGTGTTCCAGAAATGCAAGT+TGG + chr7_4:25341529-25341548 Msa1147010:CDS 40.0%
!!! ATGTTGTTTTGGTTGGCCAT+GGG - chr7_4:25341566-25341585 None:intergenic 40.0%
!! GGGCTGTAAACATGTTGTTT+TGG - chr7_4:25341577-25341596 None:intergenic 40.0%
AACAACATGTTTACAGCCCA+AGG + chr7_4:25341578-25341597 Msa1147010:CDS 40.0%
!!! TGAAGTTCCTGTGTTTTGAC+CGG - chr7_4:25341615-25341634 None:intergenic 40.0%
!! TAAGGTCTGAACTTGGTGTT+AGG - chr7_4:25341652-25341671 None:intergenic 40.0%
GTCCATGGAAGAAATACTCA+AGG + chr7_4:25341708-25341727 Msa1147010:CDS 40.0%
GTCCTTGAGTATTTCTTCCA+TGG - chr7_4:25341713-25341732 None:intergenic 40.0%
! TACGGAGAGTACATGAACAA+TGG + chr7_4:25341827-25341846 Msa1147010:CDS 40.0%
AGAGTACATGAACAATGGAC+CGG + chr7_4:25341832-25341851 Msa1147010:CDS 40.0%
ACAGTAGCACAACTAATCCA+AGG + chr7_4:25341929-25341948 Msa1147010:CDS 40.0%
TCCAAGGAAATGTATGGTTG+AGG + chr7_4:25341945-25341964 Msa1147010:CDS 40.0%
TCCTCAACCATACATTTCCT+TGG - chr7_4:25341949-25341968 None:intergenic 40.0%
AATGTATGGTTGAGGAACAC+GGG + chr7_4:25341953-25341972 Msa1147010:CDS 40.0%
!!! GTTTTGGGAAGGGATTTTCT+AGG - chr7_4:25340130-25340149 None:intergenic 40.0%
AATCCCTTCCCAAAACTTTC+TGG + chr7_4:25340134-25340153 Msa1147010:CDS 40.0%
AGCATGTTCACAGTAAACAC+GGG - chr7_4:25340254-25340273 None:intergenic 40.0%
GAGCATGTTCACAGTAAACA+CGG - chr7_4:25340255-25340274 None:intergenic 40.0%
!! TGTGGTGGACTTGGTTAATA+AGG - chr7_4:25340371-25340390 None:intergenic 40.0%
! AGCATTTTGAATGTGTGTGG+TGG - chr7_4:25340386-25340405 None:intergenic 40.0%
!! CTTCTCTAGGGCTGTTAATT+CGG - chr7_4:25340435-25340454 None:intergenic 40.0%
GAGTGACTGTGAACAACTAA+TGG + chr7_4:25340465-25340484 Msa1147010:CDS 40.0%
!! ACTTGCTTGGATGGATTAGA+AGG + chr7_4:25340598-25340617 Msa1147010:CDS 40.0%
! TGGATTAGAAGGTACATCTC+GGG + chr7_4:25340609-25340628 Msa1147010:CDS 40.0%
CGTTATGGAAAATGACCTTC+AGG + chr7_4:25340633-25340652 Msa1147010:CDS 40.0%
TGATTGGAGAATTTCCTTCG+TGG + chr7_4:25340743-25340762 Msa1147010:CDS 40.0%
GATTGGAGAATTTCCTTCGT+GGG + chr7_4:25340744-25340763 Msa1147010:CDS 40.0%
! AAGCAAAGATAGGAGGCTTT+TGG + chr7_4:25340771-25340790 Msa1147010:CDS 40.0%
GGACATAAAGGCAAATGTTG+TGG + chr7_4:25340807-25340826 Msa1147010:CDS 40.0%
CATAAAGGCAAATGTTGTGG+TGG + chr7_4:25340810-25340829 Msa1147010:CDS 40.0%
ACCTTCAAAAGTTCAACCGT+CGG + chr7_4:25341045-25341064 Msa1147010:CDS 40.0%
!!! AAAATCTGGTTTTGCAGCTG+CGG + chr7_4:25341286-25341305 Msa1147010:intron 40.0%
! ATTTGGTTCCAAAATACGGC+AGG + chr7_4:25341335-25341354 Msa1147010:CDS 40.0%
!! TGCGTAAAGAGTGTCTTGAA+AGG - chr7_4:25341435-25341454 None:intergenic 40.0%
GTCAATGGTACCTGTAATGA+CGG - chr7_4:25341486-25341505 None:intergenic 40.0%
!! GGTACCATTGACTTCATCTT+TGG + chr7_4:25341494-25341513 Msa1147010:CDS 40.0%
TGTGTTCCAGAAATGCAAGT+TGG + chr7_4:25341529-25341548 Msa1147010:CDS 40.0%
!!! ATGTTGTTTTGGTTGGCCAT+GGG - chr7_4:25341566-25341585 None:intergenic 40.0%
!! GGGCTGTAAACATGTTGTTT+TGG - chr7_4:25341577-25341596 None:intergenic 40.0%
AACAACATGTTTACAGCCCA+AGG + chr7_4:25341578-25341597 Msa1147010:CDS 40.0%
!!! TGAAGTTCCTGTGTTTTGAC+CGG - chr7_4:25341615-25341634 None:intergenic 40.0%
!! TAAGGTCTGAACTTGGTGTT+AGG - chr7_4:25341652-25341671 None:intergenic 40.0%
GTCCATGGAAGAAATACTCA+AGG + chr7_4:25341708-25341727 Msa1147010:CDS 40.0%
GTCCTTGAGTATTTCTTCCA+TGG - chr7_4:25341713-25341732 None:intergenic 40.0%
! TACGGAGAGTACATGAACAA+TGG + chr7_4:25341827-25341846 Msa1147010:CDS 40.0%
AGAGTACATGAACAATGGAC+CGG + chr7_4:25341832-25341851 Msa1147010:CDS 40.0%
ACAGTAGCACAACTAATCCA+AGG + chr7_4:25341929-25341948 Msa1147010:CDS 40.0%
TCCAAGGAAATGTATGGTTG+AGG + chr7_4:25341945-25341964 Msa1147010:CDS 40.0%
TCCTCAACCATACATTTCCT+TGG - chr7_4:25341949-25341968 None:intergenic 40.0%
AATGTATGGTTGAGGAACAC+GGG + chr7_4:25341953-25341972 Msa1147010:CDS 40.0%
AGCTGTGGTGAGGTGAAAAA+AGG - chr7_4:25340230-25340249 None:intergenic 45.0%
GCATGTTCACAGTAAACACG+GGG - chr7_4:25340253-25340272 None:intergenic 45.0%
AGTATCTGACGTCCCAACTT+TGG + chr7_4:25340309-25340328 Msa1147010:CDS 45.0%
! CTTTTGTGGCGACCAAAGTT+GGG - chr7_4:25340324-25340343 None:intergenic 45.0%
! TCTTTTGTGGCGACCAAAGT+TGG - chr7_4:25340325-25340344 None:intergenic 45.0%
!! GTGCAAGCTTTGGTCTTTTG+TGG - chr7_4:25340338-25340357 None:intergenic 45.0%
! ACAAGAGTACGTGCAAGCTT+TGG - chr7_4:25340348-25340367 None:intergenic 45.0%
!! TTGAATGTGTGTGGTGGACT+TGG - chr7_4:25340380-25340399 None:intergenic 45.0%
CGAGTCCCAAATTCTGTTCA+TGG - chr7_4:25340497-25340516 None:intergenic 45.0%
! AACCATGCAACTTGCTTGGA+TGG + chr7_4:25340589-25340608 Msa1147010:CDS 45.0%
ATCCATCCAAGCAAGTTGCA+TGG - chr7_4:25340594-25340613 None:intergenic 45.0%
CTCTGGATATCAAGTCCTGA+AGG - chr7_4:25340651-25340670 None:intergenic 45.0%
! AGCTAGAGAAGATCTAGCTC+TGG - chr7_4:25340668-25340687 None:intergenic 45.0%
! AATTGGTCACGGTCCTTTTG+AGG - chr7_4:25340709-25340728 None:intergenic 45.0%
TCTTTGCTTGTAACCCACGA+AGG - chr7_4:25340760-25340779 None:intergenic 45.0%
! CGTGGGTTACAAGCAAAGAT+AGG + chr7_4:25340761-25340780 Msa1147010:CDS 45.0%
GGGTTACAAGCAAAGATAGG+AGG + chr7_4:25340764-25340783 Msa1147010:CDS 45.0%
! AATGTGATGCTCGTTGGTGA+TGG + chr7_4:25340970-25340989 Msa1147010:CDS 45.0%
! ACCGACGGTTGAACTTTTGA+AGG - chr7_4:25341049-25341068 None:intergenic 45.0%
CAAAAGTTCAACCGTCGGTA+TGG + chr7_4:25341050-25341069 Msa1147010:intron 45.0%
!! TGTCTTGAAAGGCGTCAATG+CGG - chr7_4:25341424-25341443 None:intergenic 45.0%
! TACCTGTAATGACGGAGTCA+CGG - chr7_4:25341478-25341497 None:intergenic 45.0%
! GTTCCAGAAATGCAAGTTGG+TGG + chr7_4:25341532-25341551 Msa1147010:CDS 45.0%
!!! CATGTTGTTTTGGTTGGCCA+TGG - chr7_4:25341567-25341586 None:intergenic 45.0%
!!! AAGTTCCTGTGTTTTGACCG+GGG - chr7_4:25341613-25341632 None:intergenic 45.0%
!!! GAAGTTCCTGTGTTTTGACC+GGG - chr7_4:25341614-25341633 None:intergenic 45.0%
ACCAAGTTCAGACCTTAAGC+CGG + chr7_4:25341655-25341674 Msa1147010:CDS 45.0%
AGGCTCCATCAAAACATTCC+TGG + chr7_4:25341682-25341701 Msa1147010:CDS 45.0%
GGCTCCATCAAAACATTCCT+GGG + chr7_4:25341683-25341702 Msa1147010:CDS 45.0%
GAGTACATGAACAATGGACC+GGG + chr7_4:25341833-25341852 Msa1147010:CDS 45.0%
TGTCATCAAAACTGCTGCAG+AGG + chr7_4:25341895-25341914 Msa1147010:CDS 45.0%
ATGTATGGTTGAGGAACACG+GGG + chr7_4:25341954-25341973 Msa1147010:CDS 45.0%
AGCTGTGGTGAGGTGAAAAA+AGG - chr7_4:25340230-25340249 None:intergenic 45.0%
GCATGTTCACAGTAAACACG+GGG - chr7_4:25340253-25340272 None:intergenic 45.0%
AGTATCTGACGTCCCAACTT+TGG + chr7_4:25340309-25340328 Msa1147010:CDS 45.0%
! CTTTTGTGGCGACCAAAGTT+GGG - chr7_4:25340324-25340343 None:intergenic 45.0%
! TCTTTTGTGGCGACCAAAGT+TGG - chr7_4:25340325-25340344 None:intergenic 45.0%
!! GTGCAAGCTTTGGTCTTTTG+TGG - chr7_4:25340338-25340357 None:intergenic 45.0%
! ACAAGAGTACGTGCAAGCTT+TGG - chr7_4:25340348-25340367 None:intergenic 45.0%
!! TTGAATGTGTGTGGTGGACT+TGG - chr7_4:25340380-25340399 None:intergenic 45.0%
CGAGTCCCAAATTCTGTTCA+TGG - chr7_4:25340497-25340516 None:intergenic 45.0%
! AACCATGCAACTTGCTTGGA+TGG + chr7_4:25340589-25340608 Msa1147010:CDS 45.0%
ATCCATCCAAGCAAGTTGCA+TGG - chr7_4:25340594-25340613 None:intergenic 45.0%
CTCTGGATATCAAGTCCTGA+AGG - chr7_4:25340651-25340670 None:intergenic 45.0%
! AGCTAGAGAAGATCTAGCTC+TGG - chr7_4:25340668-25340687 None:intergenic 45.0%
! AATTGGTCACGGTCCTTTTG+AGG - chr7_4:25340709-25340728 None:intergenic 45.0%
TCTTTGCTTGTAACCCACGA+AGG - chr7_4:25340760-25340779 None:intergenic 45.0%
! CGTGGGTTACAAGCAAAGAT+AGG + chr7_4:25340761-25340780 Msa1147010:CDS 45.0%
GGGTTACAAGCAAAGATAGG+AGG + chr7_4:25340764-25340783 Msa1147010:CDS 45.0%
! AATGTGATGCTCGTTGGTGA+TGG + chr7_4:25340970-25340989 Msa1147010:CDS 45.0%
! ACCGACGGTTGAACTTTTGA+AGG - chr7_4:25341049-25341068 None:intergenic 45.0%
CAAAAGTTCAACCGTCGGTA+TGG + chr7_4:25341050-25341069 Msa1147010:intron 45.0%
!! TGTCTTGAAAGGCGTCAATG+CGG - chr7_4:25341424-25341443 None:intergenic 45.0%
! TACCTGTAATGACGGAGTCA+CGG - chr7_4:25341478-25341497 None:intergenic 45.0%
! GTTCCAGAAATGCAAGTTGG+TGG + chr7_4:25341532-25341551 Msa1147010:CDS 45.0%
!!! CATGTTGTTTTGGTTGGCCA+TGG - chr7_4:25341567-25341586 None:intergenic 45.0%
!!! AAGTTCCTGTGTTTTGACCG+GGG - chr7_4:25341613-25341632 None:intergenic 45.0%
!!! GAAGTTCCTGTGTTTTGACC+GGG - chr7_4:25341614-25341633 None:intergenic 45.0%
ACCAAGTTCAGACCTTAAGC+CGG + chr7_4:25341655-25341674 Msa1147010:CDS 45.0%
AGGCTCCATCAAAACATTCC+TGG + chr7_4:25341682-25341701 Msa1147010:CDS 45.0%
GGCTCCATCAAAACATTCCT+GGG + chr7_4:25341683-25341702 Msa1147010:CDS 45.0%
GAGTACATGAACAATGGACC+GGG + chr7_4:25341833-25341852 Msa1147010:CDS 45.0%
TGTCATCAAAACTGCTGCAG+AGG + chr7_4:25341895-25341914 Msa1147010:CDS 45.0%
ATGTATGGTTGAGGAACACG+GGG + chr7_4:25341954-25341973 Msa1147010:CDS 45.0%
! CACGAACCATGCAACTTGCT+TGG + chr7_4:25340585-25340604 Msa1147010:CDS 50.0%
AGGTACATCTCGGGTCGTTA+TGG + chr7_4:25340618-25340637 Msa1147010:CDS 50.0%
AATGTTGTGGTGGCTCAGGA+TGG + chr7_4:25340820-25340839 Msa1147010:CDS 50.0%
ATGTTGTGGTGGCTCAGGAT+GGG + chr7_4:25340821-25340840 Msa1147010:CDS 50.0%
GAGTGGCAAGTTCAAGACTG+TGG + chr7_4:25340843-25340862 Msa1147010:CDS 50.0%
CAAGTTCAAGACTGTGGCTG+AGG + chr7_4:25340849-25340868 Msa1147010:CDS 50.0%
!! GATGCTCGTTGGTGATGGTA+TGG + chr7_4:25340975-25340994 Msa1147010:CDS 50.0%
AAGGGAAGGATCCATACCGA+CGG - chr7_4:25341064-25341083 None:intergenic 50.0%
!! GGCAACGGTTGATGACAGAT+TGG - chr7_4:25341403-25341422 None:intergenic 50.0%
GTCACGGTAAAACTGTCGGT+TGG - chr7_4:25341462-25341481 None:intergenic 50.0%
CGGAGTCACGGTAAAACTGT+CGG - chr7_4:25341466-25341485 None:intergenic 50.0%
TACCGTGACTCCGTCATTAC+AGG + chr7_4:25341473-25341492 Msa1147010:CDS 50.0%
! TTTGGTTGGCCATGGGCTTT+CGG - chr7_4:25341559-25341578 None:intergenic 50.0%
! ACCGGCTTAAGGTCTGAACT+TGG - chr7_4:25341659-25341678 None:intergenic 50.0%
!! GTTTTGATGGAGCCTGCAAC+CGG - chr7_4:25341677-25341696 None:intergenic 50.0%
!! ACGGCCCAGGAATGTTTTGA+TGG - chr7_4:25341690-25341709 None:intergenic 50.0%
CCACATTGACCCAACAGGAT+GGG + chr7_4:25341760-25341779 Msa1147010:CDS 50.0%
GATGACATGATAACCTGGCC+AGG - chr7_4:25341882-25341901 None:intergenic 50.0%
TGTATGGTTGAGGAACACGG+GGG + chr7_4:25341955-25341974 Msa1147010:CDS 50.0%
! CACGAACCATGCAACTTGCT+TGG + chr7_4:25340585-25340604 Msa1147010:CDS 50.0%
AGGTACATCTCGGGTCGTTA+TGG + chr7_4:25340618-25340637 Msa1147010:CDS 50.0%
AATGTTGTGGTGGCTCAGGA+TGG + chr7_4:25340820-25340839 Msa1147010:CDS 50.0%
ATGTTGTGGTGGCTCAGGAT+GGG + chr7_4:25340821-25340840 Msa1147010:CDS 50.0%
GAGTGGCAAGTTCAAGACTG+TGG + chr7_4:25340843-25340862 Msa1147010:CDS 50.0%
CAAGTTCAAGACTGTGGCTG+AGG + chr7_4:25340849-25340868 Msa1147010:CDS 50.0%
!! GATGCTCGTTGGTGATGGTA+TGG + chr7_4:25340975-25340994 Msa1147010:CDS 50.0%
AAGGGAAGGATCCATACCGA+CGG - chr7_4:25341064-25341083 None:intergenic 50.0%
!! GGCAACGGTTGATGACAGAT+TGG - chr7_4:25341403-25341422 None:intergenic 50.0%
GTCACGGTAAAACTGTCGGT+TGG - chr7_4:25341462-25341481 None:intergenic 50.0%
CGGAGTCACGGTAAAACTGT+CGG - chr7_4:25341466-25341485 None:intergenic 50.0%
TACCGTGACTCCGTCATTAC+AGG + chr7_4:25341473-25341492 Msa1147010:CDS 50.0%
! TTTGGTTGGCCATGGGCTTT+CGG - chr7_4:25341559-25341578 None:intergenic 50.0%
! ACCGGCTTAAGGTCTGAACT+TGG - chr7_4:25341659-25341678 None:intergenic 50.0%
!! GTTTTGATGGAGCCTGCAAC+CGG - chr7_4:25341677-25341696 None:intergenic 50.0%
!! ACGGCCCAGGAATGTTTTGA+TGG - chr7_4:25341690-25341709 None:intergenic 50.0%
CCACATTGACCCAACAGGAT+GGG + chr7_4:25341760-25341779 Msa1147010:CDS 50.0%
GATGACATGATAACCTGGCC+AGG - chr7_4:25341882-25341901 None:intergenic 50.0%
TGTATGGTTGAGGAACACGG+GGG + chr7_4:25341955-25341974 Msa1147010:CDS 50.0%
ACAGTAAACACGGGGAGCTG+TGG - chr7_4:25340245-25340264 None:intergenic 55.0%
!!! TAGGAGGCTTTTGGAGTCCG+CGG + chr7_4:25340780-25340799 Msa1147010:CDS 55.0%
TGCCTTTATGTCCCCAACCG+CGG - chr7_4:25340800-25340819 None:intergenic 55.0%
GGCAAATGTTGTGGTGGCTC+AGG + chr7_4:25340816-25340835 Msa1147010:CDS 55.0%
GTGGCATCTGCACCTGACAA+TGG + chr7_4:25340874-25340893 Msa1147010:CDS 55.0%
!!! TCTGGTTTTGCAGCTGCGGT+TGG + chr7_4:25341290-25341309 Msa1147010:intron 55.0%
!!! CTGGTTTTGCAGCTGCGGTT+GGG + chr7_4:25341291-25341310 Msa1147010:intron 55.0%
!! TGGTTTTGCAGCTGCGGTTG+GGG + chr7_4:25341292-25341311 Msa1147010:intron 55.0%
! CAGATTGGTCAGAGCCGACA+CGG - chr7_4:25341388-25341407 None:intergenic 55.0%
!! GAAAGGCGTCAATGCGGCAA+CGG - chr7_4:25341418-25341437 None:intergenic 55.0%
GGGCCACCAACTTGCATTTC+TGG - chr7_4:25341538-25341557 None:intergenic 55.0%
! TTGGTTGGCCATGGGCTTTC+GGG - chr7_4:25341558-25341577 None:intergenic 55.0%
GAAGACCCCGGTCAAAACAC+AGG + chr7_4:25341605-25341624 Msa1147010:CDS 55.0%
TCAGACCTTAAGCCGGTTGC+AGG + chr7_4:25341662-25341681 Msa1147010:CDS 55.0%
AAACATTCCTGGGCCGTCCA+TGG + chr7_4:25341693-25341712 Msa1147010:CDS 55.0%
ATTTCTTCCATGGACGGCCC+AGG - chr7_4:25341703-25341722 None:intergenic 55.0%
GACAGCCACATTGACCCAAC+AGG + chr7_4:25341755-25341774 Msa1147010:CDS 55.0%
GCCACATTGACCCAACAGGA+TGG + chr7_4:25341759-25341778 Msa1147010:CDS 55.0%
CCCATCCTGTTGGGTCAATG+TGG - chr7_4:25341763-25341782 None:intergenic 55.0%
TGAGTGGGATGCTGCGAGTA+AGG + chr7_4:25341784-25341803 Msa1147010:CDS 55.0%
ATGAACAATGGACCGGGTGC+TGG + chr7_4:25341839-25341858 Msa1147010:CDS 55.0%
GTACTGCCAAGAGAGTCACC+TGG + chr7_4:25341861-25341880 Msa1147010:CDS 55.0%
ACAGTAAACACGGGGAGCTG+TGG - chr7_4:25340245-25340264 None:intergenic 55.0%
!!! TAGGAGGCTTTTGGAGTCCG+CGG + chr7_4:25340780-25340799 Msa1147010:CDS 55.0%
TGCCTTTATGTCCCCAACCG+CGG - chr7_4:25340800-25340819 None:intergenic 55.0%
GGCAAATGTTGTGGTGGCTC+AGG + chr7_4:25340816-25340835 Msa1147010:CDS 55.0%
GTGGCATCTGCACCTGACAA+TGG + chr7_4:25340874-25340893 Msa1147010:CDS 55.0%
!!! TCTGGTTTTGCAGCTGCGGT+TGG + chr7_4:25341290-25341309 Msa1147010:intron 55.0%
!!! CTGGTTTTGCAGCTGCGGTT+GGG + chr7_4:25341291-25341310 Msa1147010:intron 55.0%
!! TGGTTTTGCAGCTGCGGTTG+GGG + chr7_4:25341292-25341311 Msa1147010:intron 55.0%
! CAGATTGGTCAGAGCCGACA+CGG - chr7_4:25341388-25341407 None:intergenic 55.0%
!! GAAAGGCGTCAATGCGGCAA+CGG - chr7_4:25341418-25341437 None:intergenic 55.0%
GGGCCACCAACTTGCATTTC+TGG - chr7_4:25341538-25341557 None:intergenic 55.0%
! TTGGTTGGCCATGGGCTTTC+GGG - chr7_4:25341558-25341577 None:intergenic 55.0%
GAAGACCCCGGTCAAAACAC+AGG + chr7_4:25341605-25341624 Msa1147010:CDS 55.0%
TCAGACCTTAAGCCGGTTGC+AGG + chr7_4:25341662-25341681 Msa1147010:CDS 55.0%
AAACATTCCTGGGCCGTCCA+TGG + chr7_4:25341693-25341712 Msa1147010:CDS 55.0%
ATTTCTTCCATGGACGGCCC+AGG - chr7_4:25341703-25341722 None:intergenic 55.0%
GACAGCCACATTGACCCAAC+AGG + chr7_4:25341755-25341774 Msa1147010:CDS 55.0%
GCCACATTGACCCAACAGGA+TGG + chr7_4:25341759-25341778 Msa1147010:CDS 55.0%
CCCATCCTGTTGGGTCAATG+TGG - chr7_4:25341763-25341782 None:intergenic 55.0%
TGAGTGGGATGCTGCGAGTA+AGG + chr7_4:25341784-25341803 Msa1147010:CDS 55.0%
ATGAACAATGGACCGGGTGC+TGG + chr7_4:25341839-25341858 Msa1147010:CDS 55.0%
GTACTGCCAAGAGAGTCACC+TGG + chr7_4:25341861-25341880 Msa1147010:CDS 55.0%
AAACACGGGGAGCTGTGGTG+AGG - chr7_4:25340240-25340259 None:intergenic 60.0%
!!! AGGCTTTTGGAGTCCGCGGT+TGG + chr7_4:25340784-25340803 Msa1147010:CDS 60.0%
!!! GGCTTTTGGAGTCCGCGGTT+GGG + chr7_4:25340785-25340804 Msa1147010:CDS 60.0%
!!! GCTTTTGGAGTCCGCGGTTG+GGG + chr7_4:25340786-25340805 Msa1147010:CDS 60.0%
GTCCGCGGTTGGGGACATAA+AGG + chr7_4:25340795-25340814 Msa1147010:CDS 60.0%
CAAGACTGTGGCTGAGGCTG+TGG + chr7_4:25340855-25340874 Msa1147010:CDS 60.0%
TTTGCAGCTGCGGTTGGGGA+TGG + chr7_4:25341296-25341315 Msa1147010:intron 60.0%
TTGCAGCTGCGGTTGGGGAT+GGG + chr7_4:25341297-25341316 Msa1147010:intron 60.0%
! TGGCTGCGCCTGCCGTATTT+TGG - chr7_4:25341346-25341365 None:intergenic 60.0%
ACCGGGGTCTTCTCGACCTT+GGG - chr7_4:25341597-25341616 None:intergenic 60.0%
! TGGAGCCTGCAACCGGCTTA+AGG - chr7_4:25341670-25341689 None:intergenic 60.0%
!! ACCCAACAGGATGGGCTGAG+TGG + chr7_4:25341768-25341787 Msa1147010:CDS 60.0%
CCCACTCAGCCCATCCTGTT+GGG - chr7_4:25341772-25341791 None:intergenic 60.0%
!! CCCAACAGGATGGGCTGAGT+GGG + chr7_4:25341769-25341788 Msa1147010:CDS 60.0%
TCCCACTCAGCCCATCCTGT+TGG - chr7_4:25341773-25341792 None:intergenic 60.0%
CTCTTGGCAGTACCAGCACC+CGG - chr7_4:25341854-25341873 None:intergenic 60.0%
ACCTGGCCAGGTGACTCTCT+TGG - chr7_4:25341870-25341889 None:intergenic 60.0%
ATGGTTGAGGAACACGGGGG+TGG + chr7_4:25341958-25341977 Msa1147010:CDS 60.0%
ACGGGGGTGGCCTTTACTGA+AGG + chr7_4:25341971-25341990 Msa1147010:CDS 60.0%
AAACACGGGGAGCTGTGGTG+AGG - chr7_4:25340240-25340259 None:intergenic 60.0%
!!! AGGCTTTTGGAGTCCGCGGT+TGG + chr7_4:25340784-25340803 Msa1147010:CDS 60.0%
!!! GGCTTTTGGAGTCCGCGGTT+GGG + chr7_4:25340785-25340804 Msa1147010:CDS 60.0%
!!! GCTTTTGGAGTCCGCGGTTG+GGG + chr7_4:25340786-25340805 Msa1147010:CDS 60.0%
GTCCGCGGTTGGGGACATAA+AGG + chr7_4:25340795-25340814 Msa1147010:CDS 60.0%
CAAGACTGTGGCTGAGGCTG+TGG + chr7_4:25340855-25340874 Msa1147010:CDS 60.0%
TTTGCAGCTGCGGTTGGGGA+TGG + chr7_4:25341296-25341315 Msa1147010:intron 60.0%
TTGCAGCTGCGGTTGGGGAT+GGG + chr7_4:25341297-25341316 Msa1147010:intron 60.0%
! TGGCTGCGCCTGCCGTATTT+TGG - chr7_4:25341346-25341365 None:intergenic 60.0%
ACCGGGGTCTTCTCGACCTT+GGG - chr7_4:25341597-25341616 None:intergenic 60.0%
! TGGAGCCTGCAACCGGCTTA+AGG - chr7_4:25341670-25341689 None:intergenic 60.0%
!! ACCCAACAGGATGGGCTGAG+TGG + chr7_4:25341768-25341787 Msa1147010:CDS 60.0%
CCCACTCAGCCCATCCTGTT+GGG - chr7_4:25341772-25341791 None:intergenic 60.0%
!! CCCAACAGGATGGGCTGAGT+GGG + chr7_4:25341769-25341788 Msa1147010:CDS 60.0%
TCCCACTCAGCCCATCCTGT+TGG - chr7_4:25341773-25341792 None:intergenic 60.0%
CTCTTGGCAGTACCAGCACC+CGG - chr7_4:25341854-25341873 None:intergenic 60.0%
ACCTGGCCAGGTGACTCTCT+TGG - chr7_4:25341870-25341889 None:intergenic 60.0%
ATGGTTGAGGAACACGGGGG+TGG + chr7_4:25341958-25341977 Msa1147010:CDS 60.0%
ACGGGGGTGGCCTTTACTGA+AGG + chr7_4:25341971-25341990 Msa1147010:CDS 60.0%
GTGGTGGCTCAGGATGGGAG+TGG + chr7_4:25340826-25340845 Msa1147010:CDS 65.0%
GAGAGCCACTGCCTGGTGCT+TGG - chr7_4:25341366-25341385 None:intergenic 65.0%
CAGGCAGTGGCTCTCCGTGT+CGG + chr7_4:25341371-25341390 Msa1147010:CDS 65.0%
!! GTTGGTGGCCCGAAAGCCCA+TGG + chr7_4:25341547-25341566 Msa1147010:CDS 65.0%
GCCCAAGGTCGAGAAGACCC+CGG + chr7_4:25341593-25341612 Msa1147010:CDS 65.0%
GACCGGGGTCTTCTCGACCT+TGG - chr7_4:25341598-25341617 None:intergenic 65.0%
GCCAAGAGAGTCACCTGGCC+AGG + chr7_4:25341866-25341885 Msa1147010:CDS 65.0%
GTGGTGGCTCAGGATGGGAG+TGG + chr7_4:25340826-25340845 Msa1147010:CDS 65.0%
GAGAGCCACTGCCTGGTGCT+TGG - chr7_4:25341366-25341385 None:intergenic 65.0%
CAGGCAGTGGCTCTCCGTGT+CGG + chr7_4:25341371-25341390 Msa1147010:CDS 65.0%
!! GTTGGTGGCCCGAAAGCCCA+TGG + chr7_4:25341547-25341566 Msa1147010:CDS 65.0%
GCCCAAGGTCGAGAAGACCC+CGG + chr7_4:25341593-25341612 Msa1147010:CDS 65.0%
GACCGGGGTCTTCTCGACCT+TGG - chr7_4:25341598-25341617 None:intergenic 65.0%
GCCAAGAGAGTCACCTGGCC+AGG + chr7_4:25341866-25341885 Msa1147010:CDS 65.0%
CGCAGCCAAGCACCAGGCAG+TGG + chr7_4:25341358-25341377 Msa1147010:CDS 70.0%
CGACACGGAGAGCCACTGCC+TGG - chr7_4:25341373-25341392 None:intergenic 70.0%
CGCAGCCAAGCACCAGGCAG+TGG + chr7_4:25341358-25341377 Msa1147010:CDS 70.0%
CGACACGGAGAGCCACTGCC+TGG - chr7_4:25341373-25341392 None:intergenic 70.0%
GGCAGGCGCAGCCAAGCACC+AGG + chr7_4:25341352-25341371 Msa1147010:CDS 75.0%
GGCAGGCGCAGCCAAGCACC+AGG + chr7_4:25341352-25341371 Msa1147010:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 25340097 25342000 25340097 ID=Msa1147010;Name=Msa1147010
chr7_4 mRNA 25340097 25342000 25340097 ID=Msa1147010-mRNA-1;Parent=Msa1147010;Name=Msa1147010-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|1|0|1|1|1|2|0|555
chr7_4 exon 25340097 25341066 25340097 ID=Msa1147010-mRNA-1:exon:6293;Parent=Msa1147010-mRNA-1
chr7_4 exon 25341303 25342000 25341303 ID=Msa1147010-mRNA-1:exon:6294;Parent=Msa1147010-mRNA-1
chr7_4 CDS 25340097 25341066 25340097 ID=Msa1147010-mRNA-1:cds;Parent=Msa1147010-mRNA-1
chr7_4 CDS 25341303 25342000 25341303 ID=Msa1147010-mRNA-1:cds;Parent=Msa1147010-mRNA-1
Gene Sequence

>Msa1147010

ATGGCTAGTCAACAATCTTTGCTAGACAAGCCTAGAAAATCCCTTCCCAAAACTTTCTGGTTAATCCTCTCTTTAGTTGCTATCATAAGCTCATCAGCCCTTATTTCTACTCATCTCAAGAAACCAATTTCCTTTTTTCACCTCACCACAGCTCCCCGTGTTTACTGTGAACATGCTCTCGATGCAAAATCGTGTTTAGCTCATGTATCGGAAGTATCTGACGTCCCAACTTTGGTCGCCACAAAAGACCAAAGCTTGCACGTACTCTTGTCCTTATTAACCAAGTCCACCACACACATTCAAAATGCTATGGACACAGCCAATGTTATCAAAAGCCGAATTAACAGCCCTAGAGAAGAAATTGCTTTGAGTGACTGTGAACAACTAATGGACTTGTCCATGAACAGAATTTGGGACTCGATGTTAAAGCTAACAAAAAATAATATTGACTCATATCAACATGCACATACATGGCTAAGCAGTGTGCTCACGAACCATGCAACTTGCTTGGATGGATTAGAAGGTACATCTCGGGTCGTTATGGAAAATGACCTTCAGGACTTGATATCCAGAGCTAGATCTTCTCTAGCTGTGTTTCTTGTTGTTTTTCCTCAAAAGGACCGTGACCAATTCATTGATGAAACATTGATTGGAGAATTTCCTTCGTGGGTTACAAGCAAAGATAGGAGGCTTTTGGAGTCCGCGGTTGGGGACATAAAGGCAAATGTTGTGGTGGCTCAGGATGGGAGTGGCAAGTTCAAGACTGTGGCTGAGGCTGTGGCATCTGCACCTGACAATGGTAAGACAAAGTATGTTATCTATGTGAAAAAGGGAACATACAAAGAGAACATAGAAATTGGTTCCAAAAAAACAAATGTGATGCTCGTTGGTGATGGTATGGATGCAACAATAATCACAGGCAACTTAAATTTTATCGATGGGACAACAACCTTCAAAAGTTCAACCGTCGCTGCGGTTGGGGATGGGTTTATAGCACAAGACATTTGGTTCCAAAATACGGCAGGCGCAGCCAAGCACCAGGCAGTGGCTCTCCGTGTCGGCTCTGACCAATCTGTCATCAACCGTTGCCGCATTGACGCCTTTCAAGACACTCTTTACGCACACTCCAACCGACAGTTTTACCGTGACTCCGTCATTACAGGTACCATTGACTTCATCTTTGGAAACGCAGCTGTTGTGTTCCAGAAATGCAAGTTGGTGGCCCGAAAGCCCATGGCCAACCAAAACAACATGTTTACAGCCCAAGGTCGAGAAGACCCCGGTCAAAACACAGGAACTTCAATTCAACAATGTGACCTAACACCAAGTTCAGACCTTAAGCCGGTTGCAGGCTCCATCAAAACATTCCTGGGCCGTCCATGGAAGAAATACTCAAGGACTGTTGTGATGCAATCTTTTCTGGACAGCCACATTGACCCAACAGGATGGGCTGAGTGGGATGCTGCGAGTAAGGACTTTCTGCAAACACTGTATTACGGAGAGTACATGAACAATGGACCGGGTGCTGGTACTGCCAAGAGAGTCACCTGGCCAGGTTATCATGTCATCAAAACTGCTGCAGAGGCTAGCAAGTTTACAGTAGCACAACTAATCCAAGGAAATGTATGGTTGAGGAACACGGGGGTGGCCTTTACTGAAGGCTTGTAA
Protein sequence

>Msa1147010

MASQQSLLDKPRKSLPKTFWLILSLVAIISSSALISTHLKKPISFFHLTTAPRVYCEHALDAKSCLAHVSEVSDVPTLVATKDQSLHVLLSLLTKSTTHIQNAMDTANVIKSRINSPREEIALSDCEQLMDLSMNRIWDSMLKLTKNNIDSYQHAHTWLSSVLTNHATCLDGLEGTSRVVMENDLQDLISRARSSLAVFLVVFPQKDRDQFIDETLIGEFPSWVTSKDRRLLESAVGDIKANVVVAQDGSGKFKTVAEAVASAPDNGKTKYVIYVKKGTYKENIEIGSKKTNVMLVGDGMDATIITGNLNFIDGTTTFKSSTVAAVGDGFIAQDIWFQNTAGAAKHQAVALRVGSDQSVINRCRIDAFQDTLYAHSNRQFYRDSVITGTIDFIFGNAAVVFQKCKLVARKPMANQNNMFTAQGREDPGQNTGTSIQQCDLTPSSDLKPVAGSIKTFLGRPWKKYSRTVVMQSFLDSHIDPTGWAEWDAASKDFLQTLYYGEYMNNGPGAGTAKRVTWPGYHVIKTAAEASKFTVAQLIQGNVWLRNTGVAFTEGL*