Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701660 | XP_003629863.1 | 63.514 | 74 | 24 | 2 | 1 | 74 | 1 | 71 | 7.68e-14 | 78.6 |
| Msa0701660 | XP_003629863.1 | 83.544 | 158 | 3 | 1 | 37 | 171 | 112 | 269 | 1.76e-83 | 257 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701660 | sp|Q8LFP7|NIP12_ARATH | 64.024 | 164 | 29 | 2 | 37 | 170 | 126 | 289 | 2.45e-66 | 207 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701660 | G7L7B6 | 63.514 | 74 | 24 | 2 | 1 | 74 | 1 | 71 | 3.67e-14 | 78.6 |
| Msa0701660 | G7L7B6 | 83.544 | 158 | 3 | 1 | 37 | 171 | 112 | 269 | 8.43e-84 | 257 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006080 | Msa0701660 | 0.842615 | 2.320358e-58 | -8.615850e-47 |
| Msa0011010 | Msa0701660 | 0.807667 | 4.518765e-50 | -8.615850e-47 |
| Msa0011040 | Msa0701660 | 0.812348 | 4.436278e-51 | -8.615850e-47 |
| Msa0013270 | Msa0701660 | 0.877930 | 4.232278e-69 | -8.615850e-47 |
| Msa0024650 | Msa0701660 | 0.807480 | 4.952641e-50 | -8.615850e-47 |
| Msa0025570 | Msa0701660 | 0.822940 | 1.810385e-53 | -8.615850e-47 |
| Msa0028690 | Msa0701660 | 0.800043 | 1.734125e-48 | -8.615850e-47 |
| Msa0045810 | Msa0701660 | 0.866573 | 2.583798e-65 | -8.615850e-47 |
| Msa0046200 | Msa0701660 | 0.853026 | 3.136787e-61 | -8.615850e-47 |
| Msa0048380 | Msa0701660 | 0.816127 | 6.489609e-52 | -8.615850e-47 |
| Msa0054790 | Msa0701660 | 0.802006 | 6.883516e-49 | -8.615850e-47 |
| Msa0062190 | Msa0701660 | 0.868644 | 5.600001e-66 | -8.615850e-47 |
| Msa0063540 | Msa0701660 | 0.803707 | 3.065027e-49 | -8.615850e-47 |
| Msa0072180 | Msa0701660 | 0.832169 | 1.101694e-55 | -8.615850e-47 |
| Msa0073110 | Msa0701660 | 0.830075 | 3.600863e-55 | -8.615850e-47 |
| Msa0092220 | Msa0701660 | 0.815795 | 7.698805e-52 | -8.615850e-47 |
| Msa0106540 | Msa0701660 | 0.847352 | 1.221055e-59 | -8.615850e-47 |
| Msa0120450 | Msa0701660 | 0.801372 | 9.287904e-49 | -8.615850e-47 |
| Msa0604220 | Msa0701660 | 0.832579 | 8.723620e-56 | -8.615850e-47 |
| Msa0606600 | Msa0701660 | 0.816279 | 6.001251e-52 | -8.615850e-47 |
| Msa0618680 | Msa0701660 | 0.866892 | 2.045308e-65 | -8.615850e-47 |
| Msa0618700 | Msa0701660 | 0.890397 | 1.022582e-73 | -8.615850e-47 |
| Msa0629160 | Msa0701660 | 0.810269 | 1.253419e-50 | -8.615850e-47 |
| Msa0646430 | Msa0701660 | 0.804775 | 1.837635e-49 | -8.615850e-47 |
| Msa0647300 | Msa0701660 | 0.836547 | 8.779634e-57 | -8.615850e-47 |
| Msa0682110 | Msa0701660 | 0.812397 | 4.327533e-51 | -8.615850e-47 |
| Msa0682160 | Msa0701660 | 0.818362 | 2.039601e-52 | -8.615850e-47 |
| Msa0686830 | Msa0701660 | 0.842470 | 2.536490e-58 | -8.615850e-47 |
| Msa0687220 | Msa0701660 | 0.801642 | 8.175934e-49 | -8.615850e-47 |
| Msa0698280 | Msa0701660 | 0.808367 | 3.207599e-50 | -8.615850e-47 |
| Msa0699170 | Msa0701660 | 0.806016 | 1.009610e-49 | -8.615850e-47 |
| Msa0701660 | Msa0702800 | 0.804896 | 1.733139e-49 | -8.615850e-47 |
| Msa0701660 | Msa0707330 | 0.801642 | 8.177661e-49 | -8.615850e-47 |
| Msa0701660 | Msa0708680 | 0.801239 | 9.891095e-49 | -8.615850e-47 |
| Msa0701660 | Msa0721930 | 0.809691 | 1.669781e-50 | -8.615850e-47 |
| Msa0701660 | Msa0733560 | 0.819335 | 1.226219e-52 | -8.615850e-47 |
| Msa0701660 | Msa0762930 | 0.808220 | 3.447674e-50 | -8.615850e-47 |
| Msa0701660 | Msa0773030 | 0.821421 | 4.074493e-53 | -8.615850e-47 |
| Msa0701660 | Msa0792410 | 0.814294 | 1.657679e-51 | -8.615850e-47 |
| Msa0701660 | Msa0804170 | 0.801870 | 7.340494e-49 | -8.615850e-47 |
| Msa0701660 | Msa0810330 | 0.806990 | 6.289372e-50 | -8.615850e-47 |
| Msa0701660 | Msa0812720 | 0.808977 | 2.375950e-50 | -8.615850e-47 |
| Msa0701660 | Msa0838210 | 0.818631 | 1.772436e-52 | -8.615850e-47 |
| Msa0701660 | Msa0838620 | -0.802694 | 4.967305e-49 | -8.615850e-47 |
| Msa0701660 | Msa0841520 | 0.805880 | 1.077912e-49 | -8.615850e-47 |
| Msa0701660 | Msa0853590 | 0.800279 | 1.552459e-48 | -8.615850e-47 |
| Msa0701660 | Msa0880910 | 0.860282 | 2.303366e-63 | -8.615850e-47 |
| Msa0701660 | Msa0903020 | 0.823676 | 1.218166e-53 | -8.615850e-47 |
| Msa0701660 | Msa0932140 | 0.835702 | 1.438643e-56 | -8.615850e-47 |
| Msa0701660 | Msa0932150 | 0.807982 | 3.873617e-50 | -8.615850e-47 |
| Msa0701660 | Msa0967780 | 0.865911 | 4.187103e-65 | -8.615850e-47 |
| Msa0701660 | Msa0970270 | 0.823232 | 1.547203e-53 | -8.615850e-47 |
| Msa0701660 | Msa1002820 | 0.842196 | 2.996837e-58 | -8.615850e-47 |
| Msa0701660 | Msa1029820 | 0.830687 | 2.552791e-55 | -8.615850e-47 |
| Msa0701660 | Msa1029860 | 0.832733 | 7.987967e-56 | -8.615850e-47 |
| Msa0701660 | Msa1030320 | 0.821856 | 3.232029e-53 | -8.615850e-47 |
| Msa0701660 | Msa1035050 | 0.807155 | 5.802011e-50 | -8.615850e-47 |
| Msa0701660 | Msa1035450 | 0.804710 | 1.895678e-49 | -8.615850e-47 |
| Msa0701660 | Msa1041060 | 0.813828 | 2.100380e-51 | -8.615850e-47 |
| Msa0701660 | Msa1044250 | 0.806258 | 8.974899e-50 | -8.615850e-47 |
| Msa0701660 | Msa1050160 | 0.811069 | 8.416009e-51 | -8.615850e-47 |
| Msa0701660 | Msa1056890 | 0.822700 | 2.058774e-53 | -8.615850e-47 |
| Msa0701660 | Msa1062060 | 0.805867 | 1.084789e-49 | -8.615850e-47 |
| Msa0701660 | Msa1066150 | 0.802561 | 5.292955e-49 | -8.615850e-47 |
| Msa0701660 | Msa1068730 | 0.826196 | 3.098154e-54 | -8.615850e-47 |
| Msa0701660 | Msa1068780 | 0.824601 | 7.388450e-54 | -8.615850e-47 |
| Msa0701660 | Msa1068940 | 0.829492 | 4.995444e-55 | -8.615850e-47 |
| Msa0701660 | Msa1068950 | 0.833931 | 4.015334e-56 | -8.615850e-47 |
| Msa0701660 | Msa1069350 | 0.801010 | 1.101500e-48 | -8.615850e-47 |
| Msa0701660 | Msa1075090 | 0.814964 | 1.177837e-51 | -8.615850e-47 |
| Msa0701660 | Msa1082410 | 0.814052 | 1.875266e-51 | -8.615850e-47 |
| Msa0701660 | Msa1088320 | 0.800055 | 1.724148e-48 | -8.615850e-47 |
| Msa0701660 | Msa1094810 | 0.820993 | 5.113514e-53 | -8.615850e-47 |
| Msa0701660 | Msa1103450 | 0.813382 | 2.633572e-51 | -8.615850e-47 |
| Msa0701660 | Msa1108560 | 0.846066 | 2.742002e-59 | -8.615850e-47 |
| Msa0701660 | Msa1115980 | 0.807697 | 4.452632e-50 | -8.615850e-47 |
| Msa0701660 | Msa1120960 | 0.815848 | 7.491306e-52 | -8.615850e-47 |
| Msa0701660 | Msa1147010 | 0.829655 | 4.559120e-55 | -8.615850e-47 |
| Msa0701660 | Msa1149910 | 0.800161 | 1.640734e-48 | -8.615850e-47 |
| Msa0701660 | Msa1150760 | 0.805522 | 1.281815e-49 | -8.615850e-47 |
| Msa0701660 | Msa1155610 | 0.837687 | 4.488083e-57 | -8.615850e-47 |
| Msa0701660 | Msa1156710 | 0.823308 | 1.485128e-53 | -8.615850e-47 |
| Msa0701660 | Msa1156720 | 0.833457 | 5.276404e-56 | -8.615850e-47 |
| Msa0701660 | Msa1156740 | 0.834492 | 2.904960e-56 | -8.615850e-47 |
| Msa0701660 | Msa1157210 | 0.812999 | 3.195879e-51 | -8.615850e-47 |
| Msa0701660 | Msa1160540 | 0.811601 | 6.453744e-51 | -8.615850e-47 |
| Msa0701660 | Msa1165460 | 0.841294 | 5.185775e-58 | -8.615850e-47 |
| Msa0701660 | Msa1174280 | 0.805508 | 1.290800e-49 | -8.615850e-47 |
| Msa0701660 | Msa1181090 | 0.826928 | 2.072827e-54 | -8.615850e-47 |
| Msa0701660 | Msa1186340 | 0.804076 | 2.569635e-49 | -8.615850e-47 |
| Msa0701660 | Msa1203650 | 0.806281 | 8.877327e-50 | -8.615850e-47 |
| Msa0701660 | Msa1223960 | 0.808002 | 3.836128e-50 | -8.615850e-47 |
| Msa0701660 | Msa1223990 | 0.815976 | 7.013605e-52 | -8.615850e-47 |
| Msa0701660 | Msa1245530 | 0.809520 | 1.817297e-50 | -8.615850e-47 |
| Msa0701660 | Msa1263110 | 0.850652 | 1.478365e-60 | -8.615850e-47 |
| Msa0701660 | Msa1273320 | 0.828072 | 1.101734e-54 | -8.615850e-47 |
| Msa0701660 | Msa1281780 | 0.818006 | 2.455595e-52 | -8.615850e-47 |
| Msa0701660 | Msa1283600 | 0.817749 | 2.805614e-52 | -8.615850e-47 |
| Msa0701660 | Msa1284020 | 0.848406 | 6.255905e-60 | -8.615850e-47 |
| Msa0701660 | Msa1303550 | 0.802015 | 6.855195e-49 | -8.615850e-47 |
| Msa0701660 | Msa1319190 | 0.802660 | 5.048432e-49 | -8.615850e-47 |
| Msa0701660 | Msa1322500 | 0.851986 | 6.205006e-61 | -8.615850e-47 |
| Msa0701660 | Msa1331570 | -0.809820 | 1.566284e-50 | -8.615850e-47 |
| Msa0701660 | Msa1361980 | 0.837992 | 3.746246e-57 | -8.615850e-47 |
| Msa0701660 | Msa1368420 | 0.818895 | 1.543704e-52 | -8.615850e-47 |
| Msa0701660 | Msa1383220 | 0.819151 | 1.349781e-52 | -8.615850e-47 |
| Msa0701660 | Msa1384130 | 0.808946 | 2.412081e-50 | -8.615850e-47 |
| Msa0701660 | Msa1384700 | 0.806941 | 6.442298e-50 | -8.615850e-47 |
| Msa0701660 | Msa1400300 | 0.803560 | 3.289433e-49 | -8.615850e-47 |
| Msa0701660 | Msa1405830 | 0.847782 | 9.299477e-60 | -8.615850e-47 |
| Msa0701660 | Msa1407810 | 0.851112 | 1.097420e-60 | -8.615850e-47 |
| Msa0701660 | Msa1433360 | 0.849157 | 3.870772e-60 | -8.615850e-47 |
| Msa0701660 | Msa1437780 | 0.851105 | 1.101968e-60 | -8.615850e-47 |
| Msa0701660 | Msa1455360 | 0.839392 | 1.628918e-57 | -8.615850e-47 |
| Msa0701660 | Msa1462610 | 0.815868 | 7.414927e-52 | -8.615850e-47 |
| Msa0121320 | Msa0701660 | 0.819886 | 9.175742e-53 | -8.615850e-47 |
| Msa0139500 | Msa0701660 | 0.835150 | 1.983551e-56 | -8.615850e-47 |
| Msa0152990 | Msa0701660 | 0.830395 | 3.008782e-55 | -8.615850e-47 |
| Msa0161230 | Msa0701660 | 0.811909 | 5.528535e-51 | -8.615850e-47 |
| Msa0166180 | Msa0701660 | 0.804754 | 1.855880e-49 | -8.615850e-47 |
| Msa0168750 | Msa0701660 | 0.823194 | 1.579048e-53 | -8.615850e-47 |
| Msa0189990 | Msa0701660 | 0.815252 | 1.016939e-51 | -8.615850e-47 |
| Msa0193680 | Msa0701660 | 0.807699 | 4.450216e-50 | -8.615850e-47 |
| Msa0220090 | Msa0701660 | 0.801194 | 1.010344e-48 | -8.615850e-47 |
| Msa0369990 | Msa0701660 | 0.800836 | 1.195672e-48 | -8.615850e-47 |
| Msa0370620 | Msa0701660 | 0.806898 | 6.577319e-50 | -8.615850e-47 |
| Msa0374470 | Msa0701660 | 0.822315 | 2.529305e-53 | -8.615850e-47 |
| Msa0374600 | Msa0701660 | 0.822390 | 2.430887e-53 | -8.615850e-47 |
| Msa0380110 | Msa0701660 | 0.809208 | 2.119400e-50 | -8.615850e-47 |
| Msa0383770 | Msa0701660 | 0.827063 | 1.924139e-54 | -8.615850e-47 |
| Msa0386910 | Msa0701660 | 0.822955 | 1.796080e-53 | -8.615850e-47 |
| Msa0405200 | Msa0701660 | 0.808810 | 2.578798e-50 | -8.615850e-47 |
| Msa0412580 | Msa0701660 | -0.807563 | 4.754801e-50 | -8.615850e-47 |
| Msa0417400 | Msa0701660 | 0.803422 | 3.513081e-49 | -8.615850e-47 |
| Msa0434150 | Msa0701660 | 0.829032 | 6.456385e-55 | -8.615850e-47 |
| Msa0437480 | Msa0701660 | 0.804051 | 2.600514e-49 | -8.615850e-47 |
| Msa0444380 | Msa0701660 | 0.803794 | 2.940226e-49 | -8.615850e-47 |
| Msa0448190 | Msa0701660 | 0.802577 | 5.252940e-49 | -8.615850e-47 |
| Msa0449500 | Msa0701660 | 0.823235 | 1.544914e-53 | -8.615850e-47 |
| Msa0457070 | Msa0701660 | -0.800665 | 1.295485e-48 | -8.615850e-47 |
| Msa0471390 | Msa0701660 | 0.825292 | 5.076389e-54 | -8.615850e-47 |
| Msa0241750 | Msa0701660 | 0.811490 | 6.821626e-51 | -8.615850e-47 |
| Msa0248320 | Msa0701660 | 0.807742 | 4.355666e-50 | -8.615850e-47 |
| Msa0274570 | Msa0701660 | 0.801789 | 7.627092e-49 | -8.615850e-47 |
| Msa0279810 | Msa0701660 | 0.815904 | 7.278731e-52 | -8.615850e-47 |
| Msa0287480 | Msa0701660 | 0.806003 | 1.015538e-49 | -8.615850e-47 |
| Msa0299030 | Msa0701660 | 0.802156 | 6.411720e-49 | -8.615850e-47 |
| Msa0303900 | Msa0701660 | 0.822861 | 1.888461e-53 | -8.615850e-47 |
| Msa0307630 | Msa0701660 | 0.814875 | 1.233003e-51 | -8.615850e-47 |
| Msa0318490 | Msa0701660 | 0.852072 | 5.868768e-61 | -8.615850e-47 |
| Msa0319220 | Msa0701660 | 0.819789 | 9.657883e-53 | -8.615850e-47 |
| Msa0333770 | Msa0701660 | 0.818300 | 2.106347e-52 | -8.615850e-47 |
| Msa0345050 | Msa0701660 | 0.823723 | 1.188145e-53 | -8.615850e-47 |
| Msa0348370 | Msa0701660 | 0.829170 | 5.977941e-55 | -8.615850e-47 |
| Msa0354600 | Msa0701660 | 0.820570 | 6.397562e-53 | -8.615850e-47 |
| Msa0354840 | Msa0701660 | 0.807879 | 4.074559e-50 | -8.615850e-47 |
| Msa0364030 | Msa0701660 | -0.800127 | 1.667404e-48 | -8.615850e-47 |
| Msa0490100 | Msa0701660 | 0.823134 | 1.631406e-53 | -8.615850e-47 |
| Msa0491780 | Msa0701660 | 0.805917 | 1.059075e-49 | -8.615850e-47 |
| Msa0497680 | Msa0701660 | 0.805481 | 1.307174e-49 | -8.615850e-47 |
| Msa0501080 | Msa0701660 | 0.814328 | 1.629635e-51 | -8.615850e-47 |
| Msa0502970 | Msa0701660 | 0.808415 | 3.132715e-50 | -8.615850e-47 |
| Msa0523720 | Msa0701660 | 0.824914 | 6.235494e-54 | -8.615850e-47 |
| Msa0531050 | Msa0701660 | 0.800092 | 1.694982e-48 | -8.615850e-47 |
| Msa0540640 | Msa0701660 | 0.802233 | 6.181353e-49 | -8.615850e-47 |
| Msa0549960 | Msa0701660 | 0.800561 | 1.360161e-48 | -8.615850e-47 |
| Msa0565700 | Msa0701660 | 0.915985 | 3.065559e-85 | -8.615850e-47 |
| Msa0567330 | Msa0701660 | 0.859117 | 5.162431e-63 | -8.615850e-47 |
| Msa0567570 | Msa0701660 | 0.841138 | 5.697971e-58 | -8.615850e-47 |
| Msa0576320 | Msa0701660 | 0.851825 | 6.894286e-61 | -8.615850e-47 |
| Msa0585840 | Msa0701660 | 0.803079 | 4.137511e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701660 | MtrunA17_Chr8g0379911 | 83.544 | 158 | 3 | 1 | 37 | 171 | 112 | 269 | 1.62e-87 | 257 |
| Msa0701660 | MtrunA17_Chr8g0379911 | 63.514 | 74 | 24 | 2 | 1 | 74 | 1 | 71 | 7.06e-18 | 78.6 |
| Msa0701660 | MtrunA17_Chr2g0284581 | 68.153 | 157 | 27 | 1 | 37 | 170 | 112 | 268 | 2.99e-70 | 213 |
| Msa0701660 | MtrunA17_Chr2g0284601 | 67.516 | 157 | 28 | 1 | 37 | 170 | 64 | 220 | 5.14e-70 | 211 |
| Msa0701660 | MtrunA17_Chr2g0284591 | 68.387 | 155 | 26 | 1 | 37 | 168 | 110 | 264 | 1.72e-69 | 211 |
| Msa0701660 | MtrunA17_Chr8g0379901 | 65.385 | 156 | 31 | 1 | 37 | 169 | 113 | 268 | 1.35e-67 | 207 |
| Msa0701660 | MtrunA17_Chr2g0284611 | 64.935 | 154 | 31 | 1 | 37 | 167 | 112 | 265 | 1.63e-63 | 196 |
| Msa0701660 | MtrunA17_Chr2g0284631 | 53.374 | 163 | 47 | 2 | 37 | 170 | 165 | 327 | 6.41e-57 | 181 |
| Msa0701660 | MtrunA17_Chr4g0044201 | 51.316 | 152 | 51 | 1 | 40 | 168 | 101 | 252 | 1.72e-48 | 157 |
| Msa0701660 | MtrunA17_Chr5g0435051 | 45.070 | 142 | 55 | 1 | 37 | 155 | 113 | 254 | 2.28e-35 | 124 |
| Msa0701660 | MtrunA17_Chr3g0079421 | 42.500 | 160 | 67 | 2 | 37 | 171 | 99 | 258 | 7.50e-35 | 122 |
| Msa0701660 | MtrunA17_Chr4g0001221 | 43.333 | 150 | 61 | 2 | 38 | 164 | 150 | 298 | 3.20e-31 | 114 |
| Msa0701660 | MtrunA17_Chr2g0333771 | 40.000 | 150 | 66 | 2 | 38 | 164 | 155 | 303 | 2.86e-29 | 109 |
| Msa0701660 | MtrunA17_Chr7g0217331 | 43.165 | 139 | 55 | 2 | 38 | 153 | 112 | 249 | 8.92e-29 | 107 |
| Msa0701660 | MtrunA17_Chr1g0201331 | 42.857 | 154 | 54 | 4 | 39 | 161 | 150 | 300 | 1.02e-28 | 107 |
| Msa0701660 | MtrunA17_Chr5g0426131 | 36.054 | 147 | 61 | 4 | 40 | 157 | 112 | 254 | 2.58e-19 | 82.0 |
| Msa0701660 | MtrunA17_Chr1g0184541 | 32.374 | 139 | 70 | 3 | 39 | 154 | 138 | 275 | 1.37e-14 | 69.7 |
| Msa0701660 | MtrunA17_Chr4g0001121 | 38.202 | 89 | 32 | 1 | 99 | 164 | 3 | 91 | 3.20e-13 | 62.4 |
| Msa0701660 | MtrunA17_Chr4g0001151 | 46.341 | 82 | 38 | 3 | 28 | 106 | 37 | 115 | 4.77e-12 | 62.8 |
| Msa0701660 | MtrunA17_Chr4g0001161 | 47.222 | 72 | 37 | 1 | 38 | 109 | 63 | 133 | 9.16e-12 | 59.7 |
| Msa0701660 | MtrunA17_Chr4g0001111 | 47.826 | 69 | 35 | 1 | 38 | 106 | 150 | 217 | 2.38e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701660 | AT4G18910.1 | 64.024 | 164 | 29 | 2 | 37 | 170 | 126 | 289 | 2.49e-67 | 207 |
| Msa0701660 | AT4G19030.1 | 61.585 | 164 | 33 | 2 | 37 | 170 | 129 | 292 | 1.15e-64 | 200 |
| Msa0701660 | AT5G37810.1 | 51.592 | 157 | 53 | 1 | 38 | 171 | 118 | 274 | 3.50e-48 | 158 |
| Msa0701660 | AT5G37820.1 | 52.288 | 153 | 50 | 1 | 39 | 168 | 119 | 271 | 1.46e-45 | 151 |
| Msa0701660 | AT5G37820.2 | 52.288 | 153 | 50 | 1 | 39 | 168 | 155 | 307 | 3.89e-45 | 151 |
| Msa0701660 | AT4G18910.2 | 74.227 | 97 | 18 | 1 | 37 | 126 | 126 | 222 | 4.00e-43 | 143 |
| Msa0701660 | AT4G19030.3 | 69.792 | 96 | 22 | 1 | 37 | 125 | 129 | 224 | 2.22e-40 | 136 |
| Msa0701660 | AT1G31885.2 | 42.581 | 155 | 59 | 2 | 37 | 161 | 63 | 217 | 5.08e-37 | 129 |
| Msa0701660 | AT1G31885.1 | 42.581 | 155 | 59 | 2 | 37 | 161 | 117 | 271 | 9.49e-37 | 129 |
| Msa0701660 | AT2G34390.1 | 43.671 | 158 | 59 | 2 | 37 | 164 | 121 | 278 | 2.07e-36 | 127 |
| Msa0701660 | AT2G34390.2 | 43.671 | 158 | 59 | 2 | 37 | 164 | 79 | 236 | 2.14e-36 | 126 |
| Msa0701660 | AT4G10380.1 | 42.763 | 152 | 57 | 3 | 39 | 161 | 154 | 304 | 1.59e-29 | 110 |
| Msa0701660 | AT2G34390.3 | 54.639 | 97 | 37 | 1 | 37 | 126 | 121 | 217 | 1.74e-29 | 108 |
| Msa0701660 | AT4G19030.2 | 66.234 | 77 | 19 | 1 | 37 | 106 | 129 | 205 | 8.01e-29 | 106 |
| Msa0701660 | AT1G80760.1 | 40.714 | 140 | 59 | 2 | 38 | 154 | 155 | 293 | 4.37e-27 | 103 |
| Msa0701660 | AT2G34390.4 | 51.899 | 79 | 31 | 1 | 37 | 108 | 121 | 199 | 1.84e-21 | 87.4 |
| Msa0701660 | AT2G29870.1 | 41.053 | 95 | 33 | 1 | 78 | 149 | 20 | 114 | 3.73e-17 | 73.9 |
Find 42 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCTTATGTTTATCATATC+TGG | 0.173723 | 4_4:+73088253 | Msa0701660:CDS |
| TACTTGGTGTCTCCTATTCT+TGG | 0.280405 | 4_4:+73089277 | Msa0701660:CDS |
| CTTCTGAATGTGATGTTTGC+AGG | 0.351462 | 4_4:+73088687 | Msa0701660:CDS |
| CACTGCTTCTTTCTTGCAGA+AGG | 0.380717 | 4_4:+73087223 | Msa0701660:CDS |
| GGCAAACATAATCAGTTTGT+TGG | 0.384708 | 4_4:+73088172 | Msa0701660:CDS |
| TTGGAGCTGTGGCTGGTGCA+TGG | 0.386493 | 4_4:+73089296 | Msa0701660:CDS |
| TACGTTTAAAACAATCTCAT+TGG | 0.388236 | 4_4:-73087156 | None:intergenic |
| CTGTTAGAGGAACAAGAAAA+TGG | 0.391643 | 4_4:-73087103 | None:intergenic |
| ACTCTTAGACTAATATTTAA+CGG | 0.412369 | 4_4:+73088151 | Msa0701660:CDS |
| CCTATTCTTGGAGCTGTGGC+TGG | 0.421647 | 4_4:+73089289 | Msa0701660:CDS |
| TGGAGCTGTGGCTGGTGCAT+GGG | 0.426749 | 4_4:+73089297 | Msa0701660:CDS |
| TTTGTTGGAACACTTCCAGC+TGG | 0.433109 | 4_4:+73088187 | Msa0701660:CDS |
| CCAGCCACAGCTCCAAGAAT+AGG | 0.454788 | 4_4:-73089289 | None:intergenic |
| ACAGTGAATACAGAGGAATA+TGG | 0.460120 | 4_4:+73089251 | Msa0701660:intron |
| ATTCAATCACAAAAGCTTGA+AGG | 0.482940 | 4_4:-73088216 | None:intergenic |
| TGCAGATTGGTGAGTTGGCT+GGG | 0.483568 | 4_4:+73088643 | Msa0701660:intron |
| TTGCAGATTGGTGAGTTGGC+TGG | 0.488849 | 4_4:+73088642 | Msa0701660:intron |
| CTCTTGGTGATCTCGCGAAC+CGG | 0.489371 | 4_4:-73089349 | None:intergenic |
| CATGGGTTTATAACGTCATT+CGG | 0.494271 | 4_4:+73089314 | Msa0701660:CDS |
| CAGAGGAATATGGATATACT+TGG | 0.503606 | 4_4:+73089261 | Msa0701660:intron |
| CTCCAGATATGATAAACATA+AGG | 0.504080 | 4_4:-73088255 | None:intergenic |
| AAACTTGCAGATTGGTGAGT+TGG | 0.505757 | 4_4:+73088638 | Msa0701660:intron |
| GAAAGAAGCAGTGGCATGAG+AGG | 0.513919 | 4_4:-73087213 | None:intergenic |
| GCTTGAAGGTCAGACCCAGC+TGG | 0.524734 | 4_4:-73088202 | None:intergenic |
| TTGTTGGAACACTTCCAGCT+GGG | 0.527294 | 4_4:+73088188 | Msa0701660:CDS |
| CCTAAAAGCAGCAAAACCAT+AGG | 0.538587 | 4_4:+73089381 | Msa0701660:CDS |
| GAGTTGGCTGGGATTGCCGT+TGG | 0.544203 | 4_4:+73088654 | Msa0701660:CDS |
| TCTTGTTCCTCTAACAGTGA+TGG | 0.546360 | 4_4:+73087109 | Msa0701660:exon |
| GTCTCCTATTCTTGGAGCTG+TGG | 0.546485 | 4_4:+73089285 | Msa0701660:CDS |
| AAGAGTTCCACTTGCAAGTG+TGG | 0.546686 | 4_4:-73088134 | None:intergenic |
| CATTCGGTACACGGATAAGC+CGG | 0.557498 | 4_4:+73089330 | Msa0701660:CDS |
| ACTTGAGCTGCTACATAAGC+CGG | 0.561215 | 4_4:-73088103 | None:intergenic |
| CATCGTATTTCTCATCTCAA+AGG | 0.565229 | 4_4:+73087053 | Msa0701660:five_prime_UTR |
| CTTTGAGATGAGAAATACGA+TGG | 0.570576 | 4_4:-73087052 | None:intergenic |
| TTTGGATCCACACTTGCAAG+TGG | 0.573697 | 4_4:+73088127 | Msa0701660:CDS |
| TTCTGAATGTGATGTTTGCA+GGG | 0.577720 | 4_4:+73088688 | Msa0701660:CDS |
| CTAAAAGCAGCAAAACCATA+GGG | 0.583342 | 4_4:+73089382 | Msa0701660:CDS |
| TTATAACGTCATTCGGTACA+CGG | 0.586612 | 4_4:+73089321 | Msa0701660:CDS |
| CAGAAGTACAGTAGATCCAA+CGG | 0.645576 | 4_4:-73088670 | None:intergenic |
| CGTTACCGCTCTATTATCAG+TGG | 0.661375 | 4_4:-73088281 | None:intergenic |
| CTTCTGCAAGAAAGAAGCAG+TGG | 0.662046 | 4_4:-73087222 | None:intergenic |
| AGTTGCCACTGATAATAGAG+CGG | 0.742875 | 4_4:+73088276 | Msa0701660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTTTTTTTTTTTAAA+TGG | - | chr4_4:73088899-73088918 | None:intergenic | 0.0% |
| !!! | TTAATTTTTTTTTTTTTAAA+TGG | - | chr4_4:73088899-73088918 | None:intergenic | 0.0% |
| !! | TATTATAAACTAATATGAAA+AGG | - | chr4_4:73087751-73087770 | None:intergenic | 10.0% |
| !!! | TGATAATATTGAATAATTTT+GGG | - | chr4_4:73088725-73088744 | None:intergenic | 10.0% |
| !!! | ATGATAATATTGAATAATTT+TGG | - | chr4_4:73088726-73088745 | None:intergenic | 10.0% |
| !! | TATTATAAACTAATATGAAA+AGG | - | chr4_4:73087751-73087770 | None:intergenic | 10.0% |
| !!! | TGATAATATTGAATAATTTT+GGG | - | chr4_4:73088725-73088744 | None:intergenic | 10.0% |
| !!! | ATGATAATATTGAATAATTT+TGG | - | chr4_4:73088726-73088745 | None:intergenic | 10.0% |
| !!! | TTTGCTATTTGATTTATTAA+AGG | + | chr4_4:73087309-73087328 | Msa0701660:intron | 15.0% |
| !! | TAGGGAATAAAATAAAAAAT+TGG | + | chr4_4:73087824-73087843 | Msa0701660:intron | 15.0% |
| !! | AGGGAATAAAATAAAAAATT+GGG | + | chr4_4:73087825-73087844 | Msa0701660:intron | 15.0% |
| !! | GAATTACAAATATTCAAATA+TGG | - | chr4_4:73088573-73088592 | None:intergenic | 15.0% |
| !! | AAATATGATTGATTATCATT+TGG | - | chr4_4:73089031-73089050 | None:intergenic | 15.0% |
| !!! | TTTGCTATTTGATTTATTAA+AGG | + | chr4_4:73087309-73087328 | Msa0701660:intron | 15.0% |
| !! | TAGGGAATAAAATAAAAAAT+TGG | + | chr4_4:73087824-73087843 | Msa0701660:intron | 15.0% |
| !! | AGGGAATAAAATAAAAAATT+GGG | + | chr4_4:73087825-73087844 | Msa0701660:intron | 15.0% |
| !! | GAATTACAAATATTCAAATA+TGG | - | chr4_4:73088573-73088592 | None:intergenic | 15.0% |
| !! | AAATATGATTGATTATCATT+TGG | - | chr4_4:73089031-73089050 | None:intergenic | 15.0% |
| !! | AATAATTGACATGATTTCTT+TGG | - | chr4_4:73087775-73087794 | None:intergenic | 20.0% |
| !! | AATCTTTCCATTTATTGTAT+AGG | + | chr4_4:73088078-73088097 | Msa0701660:intron | 20.0% |
| !! | ACTCTTAGACTAATATTTAA+CGG | + | chr4_4:73088151-73088170 | Msa0701660:CDS | 20.0% |
| !!! | TAATTTCATCTCTCTTATTT+TGG | + | chr4_4:73088355-73088374 | Msa0701660:intron | 20.0% |
| !! | TCAAACTCTAATATAAAAAG+AGG | + | chr4_4:73088435-73088454 | Msa0701660:intron | 20.0% |
| !! | ATAAAAGCCAATAAATAGAA+TGG | - | chr4_4:73088601-73088620 | None:intergenic | 20.0% |
| !! | TGTGATTTAGTATTTATTCT+TGG | + | chr4_4:73088802-73088821 | Msa0701660:intron | 20.0% |
| !! | AATAATTGACATGATTTCTT+TGG | - | chr4_4:73087775-73087794 | None:intergenic | 20.0% |
| !! | AATCTTTCCATTTATTGTAT+AGG | + | chr4_4:73088078-73088097 | Msa0701660:intron | 20.0% |
| !! | ACTCTTAGACTAATATTTAA+CGG | + | chr4_4:73088151-73088170 | Msa0701660:CDS | 20.0% |
| !!! | TAATTTCATCTCTCTTATTT+TGG | + | chr4_4:73088355-73088374 | Msa0701660:intron | 20.0% |
| !! | TCAAACTCTAATATAAAAAG+AGG | + | chr4_4:73088435-73088454 | Msa0701660:intron | 20.0% |
| !! | ATAAAAGCCAATAAATAGAA+TGG | - | chr4_4:73088601-73088620 | None:intergenic | 20.0% |
| !! | TGTGATTTAGTATTTATTCT+TGG | + | chr4_4:73088802-73088821 | Msa0701660:intron | 20.0% |
| !! | TACGTTTAAAACAATCTCAT+TGG | - | chr4_4:73087159-73087178 | None:intergenic | 25.0% |
| !!! | GATTGTTTTAAACGTAAACA+AGG | + | chr4_4:73087163-73087182 | Msa0701660:CDS | 25.0% |
| ! | TTGAGACAAAAAGAACAAAA+AGG | - | chr4_4:73087254-73087273 | None:intergenic | 25.0% |
| !!! | AATCTGAAACCTTTTTTTCA+TGG | + | chr4_4:73087355-73087374 | Msa0701660:intron | 25.0% |
| ! | ACATATTTCTTGATATTTGC+TGG | + | chr4_4:73087420-73087439 | Msa0701660:intron | 25.0% |
| ! | TTTGCCAAATAGTTGAAAAA+TGG | - | chr4_4:73087640-73087659 | None:intergenic | 25.0% |
| !!! | AAAACTTGTTAGGAAATTAG+AGG | + | chr4_4:73087657-73087676 | Msa0701660:intron | 25.0% |
| !!! | ATTCATTTTTCAAGCAAAGT+AGG | - | chr4_4:73087706-73087725 | None:intergenic | 25.0% |
| ! | AACACACAATTTCATTGAAT+AGG | + | chr4_4:73087805-73087824 | Msa0701660:intron | 25.0% |
| ! | ACACACAATTTCATTGAATA+GGG | + | chr4_4:73087806-73087825 | Msa0701660:intron | 25.0% |
| !! | CTCAACCAGATTTTAAATAA+AGG | + | chr4_4:73087899-73087918 | Msa0701660:intron | 25.0% |
| !! | GCAAACCTTTATTTAAAATC+TGG | - | chr4_4:73087907-73087926 | None:intergenic | 25.0% |
| ! | AGATTTATAGATAGTTAGCA+AGG | - | chr4_4:73088063-73088082 | None:intergenic | 25.0% |
| ! | TACCTTATGTTTATCATATC+TGG | + | chr4_4:73088253-73088272 | Msa0701660:CDS | 25.0% |
| !! | TTGTTTCTTGCTTGTTAATT+TGG | + | chr4_4:73088324-73088343 | Msa0701660:intron | 25.0% |
| ! | TAATACGTGTTTAGCAAAAT+AGG | + | chr4_4:73088395-73088414 | Msa0701660:intron | 25.0% |
| ! | AATACGTGTTTAGCAAAATA+GGG | + | chr4_4:73088396-73088415 | Msa0701660:intron | 25.0% |
| ! | GTTGTCTAAATATAGTTGTA+AGG | + | chr4_4:73088473-73088492 | Msa0701660:intron | 25.0% |
| !!! | TTGTAAGGTTTTGAATCATT+TGG | + | chr4_4:73088488-73088507 | Msa0701660:intron | 25.0% |
| ! | TCTTAGACCATTCTATTTAT+TGG | + | chr4_4:73088591-73088610 | Msa0701660:intron | 25.0% |
| !! | TTATTTTCAAACTTGCAGAT+TGG | + | chr4_4:73088630-73088649 | Msa0701660:intron | 25.0% |
| ! | ATACTATATGTTTCTCTTCA+TGG | + | chr4_4:73088857-73088876 | Msa0701660:intron | 25.0% |
| ! | TAGAAATTTGCAGAATCATA+AGG | - | chr4_4:73089151-73089170 | None:intergenic | 25.0% |
| !! | TACGTTTAAAACAATCTCAT+TGG | - | chr4_4:73087159-73087178 | None:intergenic | 25.0% |
| !!! | GATTGTTTTAAACGTAAACA+AGG | + | chr4_4:73087163-73087182 | Msa0701660:CDS | 25.0% |
| ! | TTGAGACAAAAAGAACAAAA+AGG | - | chr4_4:73087254-73087273 | None:intergenic | 25.0% |
| !!! | AATCTGAAACCTTTTTTTCA+TGG | + | chr4_4:73087355-73087374 | Msa0701660:intron | 25.0% |
| ! | ACATATTTCTTGATATTTGC+TGG | + | chr4_4:73087420-73087439 | Msa0701660:intron | 25.0% |
| ! | TTTGCCAAATAGTTGAAAAA+TGG | - | chr4_4:73087640-73087659 | None:intergenic | 25.0% |
| !!! | AAAACTTGTTAGGAAATTAG+AGG | + | chr4_4:73087657-73087676 | Msa0701660:intron | 25.0% |
| !!! | ATTCATTTTTCAAGCAAAGT+AGG | - | chr4_4:73087706-73087725 | None:intergenic | 25.0% |
| ! | AACACACAATTTCATTGAAT+AGG | + | chr4_4:73087805-73087824 | Msa0701660:intron | 25.0% |
| ! | ACACACAATTTCATTGAATA+GGG | + | chr4_4:73087806-73087825 | Msa0701660:intron | 25.0% |
| !! | CTCAACCAGATTTTAAATAA+AGG | + | chr4_4:73087899-73087918 | Msa0701660:intron | 25.0% |
| !! | GCAAACCTTTATTTAAAATC+TGG | - | chr4_4:73087907-73087926 | None:intergenic | 25.0% |
| ! | AGATTTATAGATAGTTAGCA+AGG | - | chr4_4:73088063-73088082 | None:intergenic | 25.0% |
| ! | TACCTTATGTTTATCATATC+TGG | + | chr4_4:73088253-73088272 | Msa0701660:CDS | 25.0% |
| !! | TTGTTTCTTGCTTGTTAATT+TGG | + | chr4_4:73088324-73088343 | Msa0701660:intron | 25.0% |
| ! | TAATACGTGTTTAGCAAAAT+AGG | + | chr4_4:73088395-73088414 | Msa0701660:intron | 25.0% |
| ! | AATACGTGTTTAGCAAAATA+GGG | + | chr4_4:73088396-73088415 | Msa0701660:intron | 25.0% |
| ! | GTTGTCTAAATATAGTTGTA+AGG | + | chr4_4:73088473-73088492 | Msa0701660:intron | 25.0% |
| !!! | TTGTAAGGTTTTGAATCATT+TGG | + | chr4_4:73088488-73088507 | Msa0701660:intron | 25.0% |
| ! | TCTTAGACCATTCTATTTAT+TGG | + | chr4_4:73088591-73088610 | Msa0701660:intron | 25.0% |
| !! | TTATTTTCAAACTTGCAGAT+TGG | + | chr4_4:73088630-73088649 | Msa0701660:intron | 25.0% |
| ! | ATACTATATGTTTCTCTTCA+TGG | + | chr4_4:73088857-73088876 | Msa0701660:intron | 25.0% |
| ! | TAGAAATTTGCAGAATCATA+AGG | - | chr4_4:73089151-73089170 | None:intergenic | 25.0% |
| TGTCACAATCCATGAAAAAA+AGG | - | chr4_4:73087367-73087386 | None:intergenic | 30.0% | |
| TGTGACAATATTTATGCAGT+TGG | + | chr4_4:73087380-73087399 | Msa0701660:intron | 30.0% | |
| TTCCTGGAATTTCAATTGTT+TGG | + | chr4_4:73087490-73087509 | Msa0701660:intron | 30.0% | |
| TCCTGGAATTTCAATTGTTT+GGG | + | chr4_4:73087491-73087510 | Msa0701660:intron | 30.0% | |
| TAGTTGAAAAATGGTGAGTT+TGG | - | chr4_4:73087631-73087650 | None:intergenic | 30.0% | |
| !! | CTCACCATTTTTCAACTATT+TGG | + | chr4_4:73087633-73087652 | Msa0701660:intron | 30.0% |
| ! | ACTATTTGGCAAAACTTGTT+AGG | + | chr4_4:73087647-73087666 | Msa0701660:intron | 30.0% |
| ACTGTTAAATACGATCAATG+CGG | - | chr4_4:73087999-73088018 | None:intergenic | 30.0% | |
| !!! | GTTAGCAAGGTTTTAAATAG+AGG | - | chr4_4:73088050-73088069 | None:intergenic | 30.0% |
| TCCATTTATTGTATAGGTAC+CGG | + | chr4_4:73088084-73088103 | Msa0701660:intron | 30.0% | |
| ATTCAATCACAAAAGCTTGA+AGG | - | chr4_4:73088219-73088238 | None:intergenic | 30.0% | |
| CTCCAGATATGATAAACATA+AGG | - | chr4_4:73088258-73088277 | None:intergenic | 30.0% | |
| ATACGTGTTTAGCAAAATAG+GGG | + | chr4_4:73088397-73088416 | Msa0701660:intron | 30.0% | |
| TGTCACAATCCATGAAAAAA+AGG | - | chr4_4:73087367-73087386 | None:intergenic | 30.0% | |
| TGTGACAATATTTATGCAGT+TGG | + | chr4_4:73087380-73087399 | Msa0701660:intron | 30.0% | |
| TTCCTGGAATTTCAATTGTT+TGG | + | chr4_4:73087490-73087509 | Msa0701660:intron | 30.0% | |
| TCCTGGAATTTCAATTGTTT+GGG | + | chr4_4:73087491-73087510 | Msa0701660:intron | 30.0% | |
| TAGTTGAAAAATGGTGAGTT+TGG | - | chr4_4:73087631-73087650 | None:intergenic | 30.0% | |
| !! | CTCACCATTTTTCAACTATT+TGG | + | chr4_4:73087633-73087652 | Msa0701660:intron | 30.0% |
| ! | ACTATTTGGCAAAACTTGTT+AGG | + | chr4_4:73087647-73087666 | Msa0701660:intron | 30.0% |
| ACTGTTAAATACGATCAATG+CGG | - | chr4_4:73087999-73088018 | None:intergenic | 30.0% | |
| !!! | GTTAGCAAGGTTTTAAATAG+AGG | - | chr4_4:73088050-73088069 | None:intergenic | 30.0% |
| TCCATTTATTGTATAGGTAC+CGG | + | chr4_4:73088084-73088103 | Msa0701660:intron | 30.0% | |
| ATTCAATCACAAAAGCTTGA+AGG | - | chr4_4:73088219-73088238 | None:intergenic | 30.0% | |
| CTCCAGATATGATAAACATA+AGG | - | chr4_4:73088258-73088277 | None:intergenic | 30.0% | |
| ATACGTGTTTAGCAAAATAG+GGG | + | chr4_4:73088397-73088416 | Msa0701660:intron | 30.0% | |
| !! | CTTTGAGATGAGAAATACGA+TGG | - | chr4_4:73087055-73087074 | None:intergenic | 35.0% |
| CATCGTATTTCTCATCTCAA+AGG | + | chr4_4:73087053-73087072 | Msa0701660:five_prime_UTR | 35.0% | |
| CTGTTAGAGGAACAAGAAAA+TGG | - | chr4_4:73087106-73087125 | None:intergenic | 35.0% | |
| ! | TTTTCTTCCATCACTGTTAG+AGG | - | chr4_4:73087119-73087138 | None:intergenic | 35.0% |
| GAAAATGTTGTAACACTTCC+TGG | + | chr4_4:73087474-73087493 | Msa0701660:intron | 35.0% | |
| CCTGGAATTTCAATTGTTTG+GGG | + | chr4_4:73087492-73087511 | Msa0701660:intron | 35.0% | |
| ! | CTGTTTCAAGGGAAATCTTT+TGG | - | chr4_4:73087604-73087623 | None:intergenic | 35.0% |
| CAAAAGATTTCCCTTGAAAC+AGG | + | chr4_4:73087602-73087621 | Msa0701660:intron | 35.0% | |
| ! | TATGTAGCAGCTCAAGTTTT+TGG | + | chr4_4:73088109-73088128 | Msa0701660:CDS | 35.0% |
| GGCAAACATAATCAGTTTGT+TGG | + | chr4_4:73088172-73088191 | Msa0701660:CDS | 35.0% | |
| ! | CAAGCAAGAAACAAAGCATT+AGG | - | chr4_4:73088318-73088337 | None:intergenic | 35.0% |
| TTCTGAATGTGATGTTTGCA+GGG | + | chr4_4:73088688-73088707 | Msa0701660:CDS | 35.0% | |
| ! | TTACGTAGTTCATCACCTTT+TGG | + | chr4_4:73088750-73088769 | Msa0701660:intron | 35.0% |
| !! | ACTTGCTATCTGTTTCCAAA+AGG | - | chr4_4:73088768-73088787 | None:intergenic | 35.0% |
| TTATATGACAGACCAATCAC+AGG | + | chr4_4:73089184-73089203 | Msa0701660:intron | 35.0% | |
| ! | ATGAATCCAGCAAGAAGTAT+AGG | + | chr4_4:73089214-73089233 | Msa0701660:intron | 35.0% |
| TATTCACTGTGTAGAAAAGC+AGG | - | chr4_4:73089241-73089260 | None:intergenic | 35.0% | |
| TTTCTACACAGTGAATACAG+AGG | + | chr4_4:73089244-73089263 | Msa0701660:intron | 35.0% | |
| ACAGTGAATACAGAGGAATA+TGG | + | chr4_4:73089251-73089270 | Msa0701660:intron | 35.0% | |
| CAGAGGAATATGGATATACT+TGG | + | chr4_4:73089261-73089280 | Msa0701660:intron | 35.0% | |
| CATGGGTTTATAACGTCATT+CGG | + | chr4_4:73089314-73089333 | Msa0701660:CDS | 35.0% | |
| TTATAACGTCATTCGGTACA+CGG | + | chr4_4:73089321-73089340 | Msa0701660:CDS | 35.0% | |
| !! | TTTTAGGAAAGATGAGCTCT+TGG | - | chr4_4:73089368-73089387 | None:intergenic | 35.0% |
| !! | CTTTGAGATGAGAAATACGA+TGG | - | chr4_4:73087055-73087074 | None:intergenic | 35.0% |
| CATCGTATTTCTCATCTCAA+AGG | + | chr4_4:73087053-73087072 | Msa0701660:five_prime_UTR | 35.0% | |
| CTGTTAGAGGAACAAGAAAA+TGG | - | chr4_4:73087106-73087125 | None:intergenic | 35.0% | |
| ! | TTTTCTTCCATCACTGTTAG+AGG | - | chr4_4:73087119-73087138 | None:intergenic | 35.0% |
| GAAAATGTTGTAACACTTCC+TGG | + | chr4_4:73087474-73087493 | Msa0701660:intron | 35.0% | |
| CCTGGAATTTCAATTGTTTG+GGG | + | chr4_4:73087492-73087511 | Msa0701660:intron | 35.0% | |
| ! | CTGTTTCAAGGGAAATCTTT+TGG | - | chr4_4:73087604-73087623 | None:intergenic | 35.0% |
| CAAAAGATTTCCCTTGAAAC+AGG | + | chr4_4:73087602-73087621 | Msa0701660:intron | 35.0% | |
| ! | TATGTAGCAGCTCAAGTTTT+TGG | + | chr4_4:73088109-73088128 | Msa0701660:CDS | 35.0% |
| GGCAAACATAATCAGTTTGT+TGG | + | chr4_4:73088172-73088191 | Msa0701660:CDS | 35.0% | |
| ! | CAAGCAAGAAACAAAGCATT+AGG | - | chr4_4:73088318-73088337 | None:intergenic | 35.0% |
| TTCTGAATGTGATGTTTGCA+GGG | + | chr4_4:73088688-73088707 | Msa0701660:CDS | 35.0% | |
| ! | TTACGTAGTTCATCACCTTT+TGG | + | chr4_4:73088750-73088769 | Msa0701660:intron | 35.0% |
| !! | ACTTGCTATCTGTTTCCAAA+AGG | - | chr4_4:73088768-73088787 | None:intergenic | 35.0% |
| TTATATGACAGACCAATCAC+AGG | + | chr4_4:73089184-73089203 | Msa0701660:intron | 35.0% | |
| ! | ATGAATCCAGCAAGAAGTAT+AGG | + | chr4_4:73089214-73089233 | Msa0701660:intron | 35.0% |
| TATTCACTGTGTAGAAAAGC+AGG | - | chr4_4:73089241-73089260 | None:intergenic | 35.0% | |
| TTTCTACACAGTGAATACAG+AGG | + | chr4_4:73089244-73089263 | Msa0701660:intron | 35.0% | |
| ACAGTGAATACAGAGGAATA+TGG | + | chr4_4:73089251-73089270 | Msa0701660:intron | 35.0% | |
| CAGAGGAATATGGATATACT+TGG | + | chr4_4:73089261-73089280 | Msa0701660:intron | 35.0% | |
| CATGGGTTTATAACGTCATT+CGG | + | chr4_4:73089314-73089333 | Msa0701660:CDS | 35.0% | |
| TTATAACGTCATTCGGTACA+CGG | + | chr4_4:73089321-73089340 | Msa0701660:CDS | 35.0% | |
| !! | TTTTAGGAAAGATGAGCTCT+TGG | - | chr4_4:73089368-73089387 | None:intergenic | 35.0% |
| TCTTGTTCCTCTAACAGTGA+TGG | + | chr4_4:73087109-73087128 | Msa0701660:exon | 40.0% | |
| !! | ATTTATGCAGTTGGTAGCTG+AGG | + | chr4_4:73087389-73087408 | Msa0701660:intron | 40.0% |
| CCCCAAACAATTGAAATTCC+AGG | - | chr4_4:73087495-73087514 | None:intergenic | 40.0% | |
| !! | TTTGGTGCTAGCAAAAGCAA+TGG | - | chr4_4:73087586-73087605 | None:intergenic | 40.0% |
| AGTTTGGTCACCTGTTTCAA+GGG | - | chr4_4:73087615-73087634 | None:intergenic | 40.0% | |
| TTATGTCGCTACCTAGATCA+CGG | - | chr4_4:73087932-73087951 | None:intergenic | 40.0% | |
| CTGCAACATGATTGCAATTG+AGG | + | chr4_4:73087973-73087992 | Msa0701660:intron | 40.0% | |
| GCCGGTACCTATACAATAAA+TGG | - | chr4_4:73088088-73088107 | None:intergenic | 40.0% | |
| AGTTGCCACTGATAATAGAG+CGG | + | chr4_4:73088276-73088295 | Msa0701660:CDS | 40.0% | |
| GTGTTTAGCAAAATAGGGGT+TGG | + | chr4_4:73088401-73088420 | Msa0701660:intron | 40.0% | |
| AAACTTGCAGATTGGTGAGT+TGG | + | chr4_4:73088638-73088657 | Msa0701660:intron | 40.0% | |
| ! | CAGAAGTACAGTAGATCCAA+CGG | - | chr4_4:73088673-73088692 | None:intergenic | 40.0% |
| CTTCTGAATGTGATGTTTGC+AGG | + | chr4_4:73088687-73088706 | Msa0701660:CDS | 40.0% | |
| !! | TACTTGGTGTCTCCTATTCT+TGG | + | chr4_4:73089277-73089296 | Msa0701660:CDS | 40.0% |
| CCTAAAAGCAGCAAAACCAT+AGG | + | chr4_4:73089381-73089400 | Msa0701660:CDS | 40.0% | |
| TCTTGTTCCTCTAACAGTGA+TGG | + | chr4_4:73087109-73087128 | Msa0701660:exon | 40.0% | |
| !! | ATTTATGCAGTTGGTAGCTG+AGG | + | chr4_4:73087389-73087408 | Msa0701660:intron | 40.0% |
| CCCCAAACAATTGAAATTCC+AGG | - | chr4_4:73087495-73087514 | None:intergenic | 40.0% | |
| !! | TTTGGTGCTAGCAAAAGCAA+TGG | - | chr4_4:73087586-73087605 | None:intergenic | 40.0% |
| AGTTTGGTCACCTGTTTCAA+GGG | - | chr4_4:73087615-73087634 | None:intergenic | 40.0% | |
| TTATGTCGCTACCTAGATCA+CGG | - | chr4_4:73087932-73087951 | None:intergenic | 40.0% | |
| CTGCAACATGATTGCAATTG+AGG | + | chr4_4:73087973-73087992 | Msa0701660:intron | 40.0% | |
| GCCGGTACCTATACAATAAA+TGG | - | chr4_4:73088088-73088107 | None:intergenic | 40.0% | |
| AGTTGCCACTGATAATAGAG+CGG | + | chr4_4:73088276-73088295 | Msa0701660:CDS | 40.0% | |
| GTGTTTAGCAAAATAGGGGT+TGG | + | chr4_4:73088401-73088420 | Msa0701660:intron | 40.0% | |
| AAACTTGCAGATTGGTGAGT+TGG | + | chr4_4:73088638-73088657 | Msa0701660:intron | 40.0% | |
| ! | CAGAAGTACAGTAGATCCAA+CGG | - | chr4_4:73088673-73088692 | None:intergenic | 40.0% |
| CTTCTGAATGTGATGTTTGC+AGG | + | chr4_4:73088687-73088706 | Msa0701660:CDS | 40.0% | |
| !! | TACTTGGTGTCTCCTATTCT+TGG | + | chr4_4:73089277-73089296 | Msa0701660:CDS | 40.0% |
| CTTCTGCAAGAAAGAAGCAG+TGG | - | chr4_4:73087225-73087244 | None:intergenic | 45.0% | |
| CACTGCTTCTTTCTTGCAGA+AGG | + | chr4_4:73087223-73087242 | Msa0701660:CDS | 45.0% | |
| !! | ATGGTGCTGGTTTACTCTCT+TGG | + | chr4_4:73087525-73087544 | Msa0701660:intron | 45.0% |
| TACTCTCTTGGTCACATCTC+TGG | + | chr4_4:73087537-73087556 | Msa0701660:intron | 45.0% | |
| GCAAAAGCAATGGTAACTGC+AGG | - | chr4_4:73087576-73087595 | None:intergenic | 45.0% | |
| GAGTTTGGTCACCTGTTTCA+AGG | - | chr4_4:73087616-73087635 | None:intergenic | 45.0% | |
| ACTTGAGCTGCTACATAAGC+CGG | - | chr4_4:73088106-73088125 | None:intergenic | 45.0% | |
| TTTGGATCCACACTTGCAAG+TGG | + | chr4_4:73088127-73088146 | Msa0701660:CDS | 45.0% | |
| AAGAGTTCCACTTGCAAGTG+TGG | - | chr4_4:73088137-73088156 | None:intergenic | 45.0% | |
| TTTGTTGGAACACTTCCAGC+TGG | + | chr4_4:73088187-73088206 | Msa0701660:CDS | 45.0% | |
| TTGTTGGAACACTTCCAGCT+GGG | + | chr4_4:73088188-73088207 | Msa0701660:CDS | 45.0% | |
| CGTTACCGCTCTATTATCAG+TGG | - | chr4_4:73088284-73088303 | None:intergenic | 45.0% | |
| TTCATTGATGCGCCTGTGAT+TGG | - | chr4_4:73089199-73089218 | None:intergenic | 45.0% | |
| CTTCTGCAAGAAAGAAGCAG+TGG | - | chr4_4:73087225-73087244 | None:intergenic | 45.0% | |
| CACTGCTTCTTTCTTGCAGA+AGG | + | chr4_4:73087223-73087242 | Msa0701660:CDS | 45.0% | |
| !! | ATGGTGCTGGTTTACTCTCT+TGG | + | chr4_4:73087525-73087544 | Msa0701660:intron | 45.0% |
| TACTCTCTTGGTCACATCTC+TGG | + | chr4_4:73087537-73087556 | Msa0701660:intron | 45.0% | |
| GCAAAAGCAATGGTAACTGC+AGG | - | chr4_4:73087576-73087595 | None:intergenic | 45.0% | |
| GAGTTTGGTCACCTGTTTCA+AGG | - | chr4_4:73087616-73087635 | None:intergenic | 45.0% | |
| ACTTGAGCTGCTACATAAGC+CGG | - | chr4_4:73088106-73088125 | None:intergenic | 45.0% | |
| TTTGGATCCACACTTGCAAG+TGG | + | chr4_4:73088127-73088146 | Msa0701660:CDS | 45.0% | |
| AAGAGTTCCACTTGCAAGTG+TGG | - | chr4_4:73088137-73088156 | None:intergenic | 45.0% | |
| TTTGTTGGAACACTTCCAGC+TGG | + | chr4_4:73088187-73088206 | Msa0701660:CDS | 45.0% | |
| TTGTTGGAACACTTCCAGCT+GGG | + | chr4_4:73088188-73088207 | Msa0701660:CDS | 45.0% | |
| CGTTACCGCTCTATTATCAG+TGG | - | chr4_4:73088284-73088303 | None:intergenic | 45.0% | |
| TTCATTGATGCGCCTGTGAT+TGG | - | chr4_4:73089199-73089218 | None:intergenic | 45.0% | |
| GAAAGAAGCAGTGGCATGAG+AGG | - | chr4_4:73087216-73087235 | None:intergenic | 50.0% | |
| !! | CAGTTGGTAGCTGAGGTGAT+AGG | + | chr4_4:73087396-73087415 | Msa0701660:intron | 50.0% |
| ! | TGCTGGTTGTGCTTCAGTGT+TGG | + | chr4_4:73087437-73087456 | Msa0701660:intron | 50.0% |
| !! | TGTTTGGGGACTTGCTGTGA+TGG | + | chr4_4:73087506-73087525 | Msa0701660:intron | 50.0% |
| AAGGTTTGCGACCGTGATCT+AGG | + | chr4_4:73087918-73087937 | Msa0701660:intron | 50.0% | |
| GTCGCAGTGACGAGACATTA+TGG | - | chr4_4:73088028-73088047 | None:intergenic | 50.0% | |
| ! | TTGCAGATTGGTGAGTTGGC+TGG | + | chr4_4:73088642-73088661 | Msa0701660:intron | 50.0% |
| ! | TGCAGATTGGTGAGTTGGCT+GGG | + | chr4_4:73088643-73088662 | Msa0701660:intron | 50.0% |
| GCAGGTCCTATACTTCTTGC+TGG | - | chr4_4:73089223-73089242 | None:intergenic | 50.0% | |
| GTCTCCTATTCTTGGAGCTG+TGG | + | chr4_4:73089285-73089304 | Msa0701660:CDS | 50.0% | |
| CATTCGGTACACGGATAAGC+CGG | + | chr4_4:73089330-73089349 | Msa0701660:CDS | 50.0% | |
| GAAAGAAGCAGTGGCATGAG+AGG | - | chr4_4:73087216-73087235 | None:intergenic | 50.0% | |
| !! | CAGTTGGTAGCTGAGGTGAT+AGG | + | chr4_4:73087396-73087415 | Msa0701660:intron | 50.0% |
| ! | TGCTGGTTGTGCTTCAGTGT+TGG | + | chr4_4:73087437-73087456 | Msa0701660:intron | 50.0% |
| !! | TGTTTGGGGACTTGCTGTGA+TGG | + | chr4_4:73087506-73087525 | Msa0701660:intron | 50.0% |
| AAGGTTTGCGACCGTGATCT+AGG | + | chr4_4:73087918-73087937 | Msa0701660:intron | 50.0% | |
| GTCGCAGTGACGAGACATTA+TGG | - | chr4_4:73088028-73088047 | None:intergenic | 50.0% | |
| ! | TTGCAGATTGGTGAGTTGGC+TGG | + | chr4_4:73088642-73088661 | Msa0701660:intron | 50.0% |
| ! | TGCAGATTGGTGAGTTGGCT+GGG | + | chr4_4:73088643-73088662 | Msa0701660:intron | 50.0% |
| GCAGGTCCTATACTTCTTGC+TGG | - | chr4_4:73089223-73089242 | None:intergenic | 50.0% | |
| GTCTCCTATTCTTGGAGCTG+TGG | + | chr4_4:73089285-73089304 | Msa0701660:CDS | 50.0% | |
| CATTCGGTACACGGATAAGC+CGG | + | chr4_4:73089330-73089349 | Msa0701660:CDS | 50.0% | |
| CCAGCCACAGCTCCAAGAAT+AGG | - | chr4_4:73089292-73089311 | None:intergenic | 55.0% | |
| CCTATTCTTGGAGCTGTGGC+TGG | + | chr4_4:73089289-73089308 | Msa0701660:CDS | 55.0% | |
| ! | CTCTTGGTGATCTCGCGAAC+CGG | - | chr4_4:73089352-73089371 | None:intergenic | 55.0% |
| CCAGCCACAGCTCCAAGAAT+AGG | - | chr4_4:73089292-73089311 | None:intergenic | 55.0% | |
| CCTATTCTTGGAGCTGTGGC+TGG | + | chr4_4:73089289-73089308 | Msa0701660:CDS | 55.0% | |
| ! | CTCTTGGTGATCTCGCGAAC+CGG | - | chr4_4:73089352-73089371 | None:intergenic | 55.0% |
| !! | GGGACTTGCTGTGATGGTGC+TGG | + | chr4_4:73087512-73087531 | Msa0701660:intron | 60.0% |
| GCTTGAAGGTCAGACCCAGC+TGG | - | chr4_4:73088205-73088224 | None:intergenic | 60.0% | |
| GAGTTGGCTGGGATTGCCGT+TGG | + | chr4_4:73088654-73088673 | Msa0701660:CDS | 60.0% | |
| TTGGAGCTGTGGCTGGTGCA+TGG | + | chr4_4:73089296-73089315 | Msa0701660:CDS | 60.0% | |
| TGGAGCTGTGGCTGGTGCAT+GGG | + | chr4_4:73089297-73089316 | Msa0701660:CDS | 60.0% | |
| !! | GGGACTTGCTGTGATGGTGC+TGG | + | chr4_4:73087512-73087531 | Msa0701660:intron | 60.0% |
| GCTTGAAGGTCAGACCCAGC+TGG | - | chr4_4:73088205-73088224 | None:intergenic | 60.0% | |
| GAGTTGGCTGGGATTGCCGT+TGG | + | chr4_4:73088654-73088673 | Msa0701660:CDS | 60.0% | |
| TTGGAGCTGTGGCTGGTGCA+TGG | + | chr4_4:73089296-73089315 | Msa0701660:CDS | 60.0% | |
| TGGAGCTGTGGCTGGTGCAT+GGG | + | chr4_4:73089297-73089316 | Msa0701660:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 73087045 | 73089402 | 73087045 | ID=Msa0701660;Name=Msa0701660 |
| chr4_4 | mRNA | 73087045 | 73089402 | 73087045 | ID=Msa0701660-mRNA-1;Parent=Msa0701660;Name=Msa0701660-mRNA-1;_AED=0.40;_eAED=0.40;_QI=83|0.33|0.5|1|1|1|4|0|171 |
| chr4_4 | exon | 73087045 | 73087244 | 73087045 | ID=Msa0701660-mRNA-1:exon:22361;Parent=Msa0701660-mRNA-1 |
| chr4_4 | exon | 73088100 | 73088297 | 73088100 | ID=Msa0701660-mRNA-1:exon:22362;Parent=Msa0701660-mRNA-1 |
| chr4_4 | exon | 73088648 | 73088709 | 73088648 | ID=Msa0701660-mRNA-1:exon:22363;Parent=Msa0701660-mRNA-1 |
| chr4_4 | exon | 73089264 | 73089402 | 73089264 | ID=Msa0701660-mRNA-1:exon:22364;Parent=Msa0701660-mRNA-1 |
| chr4_4 | five_prime_UTR | 73087045 | 73087127 | 73087045 | ID=Msa0701660-mRNA-1:five_prime_utr;Parent=Msa0701660-mRNA-1 |
| chr4_4 | CDS | 73087128 | 73087244 | 73087128 | ID=Msa0701660-mRNA-1:cds;Parent=Msa0701660-mRNA-1 |
| chr4_4 | CDS | 73088100 | 73088297 | 73088100 | ID=Msa0701660-mRNA-1:cds;Parent=Msa0701660-mRNA-1 |
| chr4_4 | CDS | 73088648 | 73088709 | 73088648 | ID=Msa0701660-mRNA-1:cds;Parent=Msa0701660-mRNA-1 |
| chr4_4 | CDS | 73089264 | 73089402 | 73089264 | ID=Msa0701660-mRNA-1:cds;Parent=Msa0701660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
